locus-tag class description D521_0001 PF00308 Bacterial dnaA protein D521_0001 PF08299 Bacterial dnaA protein helix-turn-helix D521_0001 PF11638 DnaA N-terminal domain D521_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain D521_0002 PF02767 DNA polymerase III beta subunit, central domain D521_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain D521_0003 PF00204 DNA gyrase B D521_0003 PF00986 DNA gyrase B subunit, carboxyl terminus D521_0003 PF18053 DNA gyrase B subunit insert domain D521_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_0003 PF01751 Toprim domain D521_0006 PF12399 Branched-chain amino acid ATP-binding cassette transporter D521_0006 PF00005 ABC transporter D521_0007 PF00005 ABC transporter D521_0011 PF01134 Glucose inhibited division protein A D521_0011 PF13932 GidA associated domain D521_0012 PF02527 rRNA small subunit methyltransferase G D521_0013 PF13614 AAA domain D521_0014 PF02195 ParB-like nuclease domain D521_0014 PF17762 HTH domain found in ParB protein D521_0016 PF00119 ATP synthase A chain D521_0017 PF00137 ATP synthase subunit C D521_0018 PF00430 ATP synthase B/B' CF(0) D521_0019 PF00213 ATP synthase delta (OSCP) subunit D521_0020 PF02874 ATP synthase alpha/beta family, beta-barrel domain D521_0020 PF00306 ATP synthase alpha/beta chain, C terminal domain D521_0020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D521_0021 PF00231 ATP synthase D521_0022 PF02874 ATP synthase alpha/beta family, beta-barrel domain D521_0022 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D521_0023 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D521_0023 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D521_0024 PF01208 Uroporphyrinogen decarboxylase (URO-D) D521_0025 PF00270 DEAD/DEAH box helicase D521_0025 PF17764 3′ DNA-binding domain (3′BD) D521_0025 PF18074 Primosomal protein N C-terminal domain D521_0025 PF00271 Helicase conserved C-terminal domain D521_0025 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D521_0026 PF01597 Glycine cleavage H-protein D521_0027 PF00753 Metallo-beta-lactamase superfamily D521_0030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D521_0031 PF13580 SIS domain D521_0032 PF04972 BON domain D521_0037 PF03144 Elongation factor Tu domain 2 D521_0037 PF00009 Elongation factor Tu GTP binding domain D521_0037 PF03143 Elongation factor Tu C-terminal domain D521_0038 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D521_0039 PF02357 Transcription termination factor nusG D521_0039 PF00467 KOW motif D521_0040 PF00298 Ribosomal protein L11, RNA binding domain D521_0040 PF03946 Ribosomal protein L11, N-terminal domain D521_0041 PF00687 Ribosomal protein L1p/L10e family D521_0042 PF00466 Ribosomal protein L10 D521_0043 PF16320 Ribosomal protein L7/L12 dimerisation domain D521_0043 PF00542 Ribosomal protein L7/L12 C-terminal domain D521_0044 PF04563 RNA polymerase beta subunit D521_0044 PF04560 RNA polymerase Rpb2, domain 7 D521_0044 PF00562 RNA polymerase Rpb2, domain 6 D521_0044 PF10385 RNA polymerase beta subunit external 1 domain D521_0044 PF04565 RNA polymerase Rpb2, domain 3 D521_0044 PF04561 RNA polymerase Rpb2, domain 2 D521_0045 PF04983 RNA polymerase Rpb1, domain 3 D521_0045 PF00623 RNA polymerase Rpb1, domain 2 D521_0045 PF04997 RNA polymerase Rpb1, domain 1 D521_0045 PF04998 RNA polymerase Rpb1, domain 5 D521_0045 PF05000 RNA polymerase Rpb1, domain 4 D521_0047 PF00164 Ribosomal protein S12/S23 D521_0048 PF00177 Ribosomal protein S7p/S5e D521_0049 PF00679 Elongation factor G C-terminus D521_0049 PF03764 Elongation factor G, domain IV D521_0049 PF00009 Elongation factor Tu GTP binding domain D521_0049 PF03144 Elongation factor Tu domain 2 D521_0049 PF14492 Elongation Factor G, domain II D521_0050 PF03144 Elongation factor Tu domain 2 D521_0050 PF00009 Elongation factor Tu GTP binding domain D521_0050 PF03143 Elongation factor Tu C-terminal domain D521_0051 PF00338 Ribosomal protein S10p/S20e D521_0052 PF00297 Ribosomal protein L3 D521_0053 PF00573 Ribosomal protein L4/L1 family D521_0054 PF00276 Ribosomal protein L23 D521_0055 PF03947 Ribosomal Proteins L2, C-terminal domain D521_0055 PF00181 Ribosomal Proteins L2, RNA binding domain D521_0056 PF00203 Ribosomal protein S19 D521_0057 PF00237 Ribosomal protein L22p/L17e D521_0058 PF07650 KH domain D521_0058 PF00189 Ribosomal protein S3, C-terminal domain D521_0059 PF00252 Ribosomal protein L16p/L10e D521_0060 PF00831 Ribosomal L29 protein D521_0061 PF00366 Ribosomal protein S17 D521_0062 PF00238 Ribosomal protein L14p/L23e D521_0063 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D521_0063 PF00467 KOW motif D521_0064 PF00281 Ribosomal protein L5 D521_0064 PF00673 ribosomal L5P family C-terminus D521_0065 PF00253 Ribosomal protein S14p/S29e D521_0066 PF00410 Ribosomal protein S8 D521_0067 PF00347 Ribosomal protein L6 D521_0068 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D521_0069 PF00333 Ribosomal protein S5, N-terminal domain D521_0069 PF03719 Ribosomal protein S5, C-terminal domain D521_0070 PF00327 Ribosomal protein L30p/L7e D521_0071 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D521_0072 PF00344 SecY translocase D521_0073 PF01176 Translation initiation factor 1A / IF-1 D521_0074 PF00444 Ribosomal protein L36 D521_0075 PF00416 Ribosomal protein S13/S18 D521_0076 PF00411 Ribosomal protein S11 D521_0077 PF00163 Ribosomal protein S4/S9 N-terminal domain D521_0077 PF01479 S4 domain D521_0078 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D521_0078 PF01000 RNA polymerase Rpb3/RpoA insert domain D521_0078 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D521_0079 PF01196 Ribosomal protein L17 D521_0081 PF11412 Disulphide bond corrector protein DsbC D521_0081 PF02683 Cytochrome C biogenesis protein transmembrane region D521_0081 PF13098 Thioredoxin-like domain D521_0082 PF00490 Delta-aminolevulinic acid dehydratase D521_0083 PF01926 50S ribosome-binding GTPase D521_0084 PF00034 Cytochrome c D521_0085 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D521_0085 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D521_0086 PF01491 Frataxin-like domain D521_0087 PF01761 3-dehydroquinate synthase D521_0088 PF01202 Shikimate kinase D521_0089 PF11741 AMIN domain D521_0089 PF00263 Bacterial type II and III secretion system protein D521_0089 PF03958 Bacterial type II/III secretion system short domain D521_0089 PF07660 Secretin and TonB N terminus short domain D521_0091 PF17092 Penicillin-binding protein OB-like domain D521_0091 PF00912 Transglycosylase D521_0091 PF00905 Penicillin binding protein transpeptidase domain D521_0093 PF01645 Conserved region in glutamate synthase D521_0093 PF04898 Glutamate synthase central domain D521_0093 PF01493 GXGXG motif D521_0093 PF00310 Glutamine amidotransferases class-II D521_0094 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D521_0094 PF07992 Pyridine nucleotide-disulphide oxidoreductase D521_0095 PF00005 ABC transporter D521_0096 PF02405 Permease MlaE D521_0097 PF02470 MlaD protein D521_0101 PF00005 ABC transporter D521_0102 PF01061 ABC-2 type transporter D521_0103 PF01722 BolA-like protein D521_0104 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D521_0105 PF01634 ATP phosphoribosyltransferase D521_0106 PF00815 Histidinol dehydrogenase D521_0107 PF00155 Aminotransferase class I and II D521_0108 PF00475 Imidazoleglycerol-phosphate dehydratase D521_0110 PF00977 Histidine biosynthesis protein D521_0111 PF00977 Histidine biosynthesis protein D521_0112 PF01502 Phosphoribosyl-AMP cyclohydrolase D521_0113 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D521_0114 PF01230 HIT domain D521_0115 PF02416 mttA/Hcf106 family D521_0116 PF02416 mttA/Hcf106 family D521_0117 PF00902 Sec-independent protein translocase protein (TatC) D521_0119 PF13609 Gram-negative porin D521_0120 PF01741 Large-conductance mechanosensitive channel, MscL D521_0121 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D521_0121 PF00355 Rieske [2Fe-2S] domain D521_0122 PF00032 Cytochrome b(C-terminal)/b6/petD D521_0122 PF00033 Cytochrome b/b6/petB D521_0123 PF02167 Cytochrome C1 family D521_0124 PF02798 Glutathione S-transferase, N-terminal domain D521_0124 PF00043 Glutathione S-transferase, C-terminal domain D521_0125 PF04386 Stringent starvation protein B D521_0130 PF00083 Sugar (and other) transporter D521_0130 PF07690 Major Facilitator Superfamily D521_0131 PF02646 RmuC family D521_0132 PF00462 Glutaredoxin D521_0133 PF05175 Methyltransferase small domain D521_0133 PF17827 PrmC N-terminal domain D521_0134 PF00472 RF-1 domain D521_0134 PF03462 PCRF domain D521_0135 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D521_0135 PF01488 Shikimate / quinate 5-dehydrogenase D521_0135 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D521_0137 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system D521_0138 PF11455 Protein of unknown function (DUF3018) D521_0139 PF03167 Uracil DNA glycosylase superfamily D521_0141 PF13098 Thioredoxin-like domain D521_0141 PF10411 Disulfide bond isomerase protein N-terminus D521_0142 PF01494 FAD binding domain D521_0143 PF06071 Protein of unknown function (DUF933) D521_0143 PF01926 50S ribosome-binding GTPase D521_0146 PF00218 Indole-3-glycerol phosphate synthase D521_0147 PF02885 Glycosyl transferase family, helical bundle domain D521_0147 PF00591 Glycosyl transferase family, a/b domain D521_0148 PF00117 Glutamine amidotransferase class-I D521_0149 PF04715 Anthranilate synthase component I, N terminal region D521_0149 PF00425 chorismate binding enzyme D521_0150 PF00834 Ribulose-phosphate 3 epimerase family D521_0151 PF04379 ApaG domain D521_0154 PF00378 Enoyl-CoA hydratase/isomerase D521_0157 PF00155 Aminotransferase class I and II D521_0158 PF00202 Aminotransferase class-III D521_0159 PF06968 Biotin and Thiamin Synthesis associated domain D521_0159 PF04055 Radical SAM superfamily D521_0160 PF03232 Ubiquinone biosynthesis protein COQ7 D521_0161 PF02381 MraZ protein, putative antitoxin-like D521_0162 PF01795 MraW methylase family D521_0163 PF04999 Cell division protein FtsL D521_0164 PF03717 Penicillin-binding Protein dimerisation domain D521_0164 PF00905 Penicillin binding protein transpeptidase domain D521_0165 PF02875 Mur ligase family, glutamate ligase domain D521_0165 PF08245 Mur ligase middle domain D521_0166 PF08245 Mur ligase middle domain D521_0166 PF02875 Mur ligase family, glutamate ligase domain D521_0166 PF01225 Mur ligase family, catalytic domain D521_0167 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D521_0167 PF00953 Glycosyl transferase family 4 D521_0168 PF08245 Mur ligase middle domain D521_0168 PF02875 Mur ligase family, glutamate ligase domain D521_0169 PF01098 Cell cycle protein D521_0170 PF04101 Glycosyltransferase family 28 C-terminal domain D521_0170 PF03033 Glycosyltransferase family 28 N-terminal domain D521_0171 PF01225 Mur ligase family, catalytic domain D521_0171 PF02875 Mur ligase family, glutamate ligase domain D521_0171 PF08245 Mur ligase middle domain D521_0172 PF07478 D-ala D-ala ligase C-terminus D521_0172 PF01820 D-ala D-ala ligase N-terminus D521_0173 PF03799 Cell division protein FtsQ D521_0173 PF08478 POTRA domain, FtsQ-type D521_0174 PF02491 SHS2 domain inserted in FTSA D521_0175 PF12327 FtsZ family, C-terminal domain D521_0175 PF00091 Tubulin/FtsZ family, GTPase domain D521_0176 PF08534 Redoxin D521_0177 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D521_0179 PF02810 SEC-C motif D521_0179 PF07516 SecA Wing and Scaffold domain D521_0179 PF01043 SecA preprotein cross-linking domain D521_0179 PF07517 SecA DEAD-like domain D521_0182 PF00293 NUDIX domain D521_0183 PF07072 Cell division protein D521_0184 PF01121 Dephospho-CoA kinase D521_0185 PF06750 Bacterial Peptidase A24 N-terminal domain D521_0185 PF01478 Type IV leader peptidase family D521_0186 PF00482 Type II secretion system (T2SS), protein F D521_0187 PF00437 Type II/IV secretion system protein D521_0187 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D521_0188 PF03471 Transporter associated domain D521_0188 PF00571 CBS domain D521_0188 PF01595 Cyclin M transmembrane N-terminal domain D521_0192 PF02558 Ketopantoate reductase PanE/ApbA D521_0192 PF08546 Ketopantoate reductase PanE/ApbA C terminal D521_0195 PF00348 Polyprenyl synthetase D521_0196 PF00829 Ribosomal prokaryotic L21 protein D521_0197 PF01016 Ribosomal L27 protein D521_0198 PF01926 50S ribosome-binding GTPase D521_0198 PF01018 GTP1/OBG D521_0199 PF00696 Amino acid kinase family D521_0199 PF01472 PUA domain D521_0201 PF00293 NUDIX domain D521_0202 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D521_0202 PF04073 Aminoacyl-tRNA editing domain D521_0202 PF03129 Anticodon binding domain D521_0203 PF00448 SRP54-type protein, GTPase domain D521_0203 PF02978 Signal peptide binding domain D521_0203 PF02881 SRP54-type protein, helical bundle domain D521_0205 PF01510 N-acetylmuramoyl-L-alanine amidase D521_0206 PF00317 Ribonucleotide reductase, all-alpha domain D521_0206 PF03477 ATP cone domain D521_0206 PF02867 Ribonucleotide reductase, barrel domain D521_0207 PF00268 Ribonucleotide reductase, small chain D521_0212 PF02785 Biotin carboxylase C-terminal domain D521_0212 PF00289 Biotin carboxylase, N-terminal domain D521_0212 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D521_0213 PF00364 Biotin-requiring enzyme D521_0214 PF01220 Dehydroquinase class II D521_0215 PF00578 AhpC/TSA family D521_0216 PF08245 Mur ligase middle domain D521_0216 PF02875 Mur ligase family, glutamate ligase domain D521_0216 PF01225 Mur ligase family, catalytic domain D521_0218 PF00575 S1 RNA binding domain D521_0218 PF00773 RNB domain D521_0218 PF08206 Ribonuclease B OB domain D521_0218 PF17876 Cold shock domain D521_0221 PF00912 Transglycosylase D521_0222 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D521_0223 PF01544 CorA-like Mg2+ transporter protein D521_0224 PF02464 Competence-damaged protein D521_0225 PF04608 Phosphatidylglycerophosphatase A D521_0226 PF00586 AIR synthase related protein, N-terminal domain D521_0226 PF02769 AIR synthase related protein, C-terminal domain D521_0227 PF01515 Phosphate acetyl/butaryl transferase D521_0227 PF03949 Malic enzyme, NAD binding domain D521_0227 PF00390 Malic enzyme, N-terminal domain D521_0229 PF04452 RNA methyltransferase D521_0230 PF02780 Transketolase, C-terminal domain D521_0230 PF00456 Transketolase, thiamine diphosphate binding domain D521_0230 PF02779 Transketolase, pyrimidine binding domain D521_0231 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D521_0231 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D521_0232 PF04355 SmpA / OmlA family D521_0233 PF01475 Ferric uptake regulator family D521_0234 PF01113 Dihydrodipicolinate reductase, N-terminus D521_0234 PF05173 Dihydrodipicolinate reductase, C-terminus D521_0235 PF08264 Anticodon-binding domain of tRNA D521_0235 PF13603 Leucyl-tRNA synthetase, Domain 2 D521_0235 PF00133 tRNA synthetases class I (I, L, M and V) D521_0235 PF09334 tRNA synthetases class I (M) D521_0238 PF00171 Aldehyde dehydrogenase family D521_0240 PF01170 Putative RNA methylase family UPF0020 D521_0240 PF02926 THUMP domain D521_0241 PF00301 Rubredoxin D521_0242 PF00202 Aminotransferase class-III D521_0243 PF00149 Calcineurin-like phosphoesterase D521_0244 PF03441 FAD binding domain of DNA photolyase D521_0244 PF00875 DNA photolyase D521_0246 PF02622 Uncharacterized ACR, COG1678 D521_0247 PF03652 Holliday junction resolvase D521_0248 PF00156 Phosphoribosyl transferase domain D521_0249 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D521_0249 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D521_0252 PF16363 GDP-mannose 4,6 dehydratase D521_0253 PF04321 RmlD substrate binding domain D521_0254 PF00483 Nucleotidyl transferase D521_0255 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D521_0256 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D521_0257 PF02321 Outer membrane efflux protein D521_0258 PF02673 Bacitracin resistance protein BacA D521_0260 PF02390 Putative methyltransferase D521_0261 PF00171 Aldehyde dehydrogenase family D521_0262 PF01029 NusB family D521_0263 PF00885 6,7-dimethyl-8-ribityllumazine synthase D521_0264 PF00925 GTP cyclohydrolase II D521_0264 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D521_0270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D521_0270 PF01872 RibD C-terminal domain D521_0271 PF00677 Lumazine binding domain D521_0272 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D521_0274 PF06508 Queuosine biosynthesis protein QueC D521_0276 PF00691 OmpA family D521_0277 PF07676 WD40-like Beta Propeller Repeat D521_0277 PF04052 TolB amino-terminal domain D521_0279 PF02472 Biopolymer transport protein ExbD/TolR D521_0280 PF01618 MotA/TolQ/ExbB proton channel family D521_0281 PF00464 Serine hydroxymethyltransferase D521_0282 PF03477 ATP cone domain D521_0285 PF05191 Adenylate kinase, active site lid D521_0286 PF02348 Cytidylyltransferase D521_0287 PF03966 Trm112p-like protein D521_0288 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D521_0289 PF02472 Biopolymer transport protein ExbD/TolR D521_0290 PF01618 MotA/TolQ/ExbB proton channel family D521_0291 PF13742 OB-fold nucleic acid binding domain D521_0291 PF02601 Exonuclease VII, large subunit D521_0293 PF01565 FAD binding domain D521_0293 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D521_0294 PF04461 Protein of unknown function (DUF520) D521_0297 PF00589 Phage integrase family D521_0297 PF02899 Phage integrase, N-terminal SAM-like domain D521_0298 PF01850 PIN domain D521_0299 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D521_0302 PF01227 GTP cyclohydrolase I D521_0304 PF01355 High potential iron-sulfur protein D521_0307 PF00483 Nucleotidyl transferase D521_0307 PF01050 Mannose-6-phosphate isomerase D521_0308 PF16363 GDP-mannose 4,6 dehydratase D521_0309 PF16363 GDP-mannose 4,6 dehydratase D521_0310 PF01370 NAD dependent epimerase/dehydratase family D521_0314 PF00483 Nucleotidyl transferase D521_0315 PF16363 GDP-mannose 4,6 dehydratase D521_0316 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D521_0319 PF08666 SAF domain D521_0319 PF03102 NeuB family D521_0320 PF16363 GDP-mannose 4,6 dehydratase D521_0323 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D521_0323 PF00205 Thiamine pyrophosphate enzyme, central domain D521_0323 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D521_0326 PF00535 Glycosyl transferase family 2 D521_0330 PF01699 Sodium/calcium exchanger protein D521_0332 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D521_0334 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D521_0334 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D521_0346 PF04751 Protein of unknown function (DUF615) D521_0348 PF00732 GMC oxidoreductase D521_0348 PF05199 GMC oxidoreductase D521_0350 PF13458 Periplasmic binding protein D521_0351 PF02653 Branched-chain amino acid transport system / permease component D521_0352 PF12399 Branched-chain amino acid ATP-binding cassette transporter D521_0352 PF00005 ABC transporter D521_0353 PF00005 ABC transporter D521_0355 PF01925 Sulfite exporter TauE/SafE D521_0356 PF00753 Metallo-beta-lactamase superfamily D521_0366 PF01464 Transglycosylase SLT domain D521_0366 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D521_0367 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D521_0369 PF07690 Major Facilitator Superfamily D521_0370 PF03971 Monomeric isocitrate dehydrogenase D521_0372 PF00174 Oxidoreductase molybdopterin binding domain D521_0373 PF01794 Ferric reductase like transmembrane component D521_0377 PF00106 short chain dehydrogenase D521_0379 PF01479 S4 domain D521_0379 PF00849 RNA pseudouridylate synthase D521_0380 PF01329 Pterin 4 alpha carbinolamine dehydratase D521_0386 PF00639 PPIC-type PPIASE domain D521_0386 PF09312 SurA N-terminal domain D521_0389 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D521_0389 PF03466 LysR substrate binding domain D521_0390 PF03741 Integral membrane protein TerC family D521_0393 PF00873 AcrB/AcrD/AcrF family D521_0394 PF00543 Nitrogen regulatory protein P-II D521_0395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D521_0397 PF01565 FAD binding domain D521_0397 PF13183 4Fe-4S dicluster domain D521_0397 PF02913 FAD linked oxidases, C-terminal domain D521_0398 PF13192 Thioredoxin domain D521_0398 PF07992 Pyridine nucleotide-disulphide oxidoreductase D521_0399 PF10417 C-terminal domain of 1-Cys peroxiredoxin D521_0399 PF00578 AhpC/TSA family D521_0403 PF02321 Outer membrane efflux protein D521_0405 PF00873 AcrB/AcrD/AcrF family D521_0407 PF00085 Thioredoxin D521_0415 PF00512 His Kinase A (phospho-acceptor) domain D521_0415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_0415 PF00989 PAS fold D521_0417 PF03060 Nitronate monooxygenase D521_0418 PF03477 ATP cone domain D521_0418 PF02867 Ribonucleotide reductase, barrel domain D521_0418 PF00317 Ribonucleotide reductase, all-alpha domain D521_0421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_0421 PF07730 Histidine kinase D521_0421 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D521_0421 PF00672 HAMP domain D521_0422 PF00196 Bacterial regulatory proteins, luxR family D521_0422 PF00072 Response regulator receiver domain D521_0423 PF07690 Major Facilitator Superfamily D521_0424 PF07690 Major Facilitator Superfamily D521_0425 PF00384 Molybdopterin oxidoreductase D521_0425 PF14710 Respiratory nitrate reductase alpha N-terminal D521_0425 PF01568 Molydopterin dinucleotide binding domain D521_0426 PF13247 4Fe-4S dicluster domain D521_0426 PF14711 Respiratory nitrate reductase beta C-terminal D521_0427 PF02613 Nitrate reductase delta subunit D521_0428 PF02665 Nitrate reductase gamma subunit D521_0429 PF00484 Carbonic anhydrase D521_0432 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D521_0434 PF02687 FtsX-like permease family D521_0434 PF00005 ABC transporter D521_0434 PF12704 MacB-like periplasmic core domain D521_0446 PF08751 TrwC relaxase D521_0446 PF07057 DNA helicase TraI D521_0446 PF18272 single-stranded DNA binding TraI N-terminal subdomain D521_0446 PF18340 DNA relaxase TraI 2B/2B-like domain D521_0464 PF00589 Phage integrase family D521_0464 PF02899 Phage integrase, N-terminal SAM-like domain D521_0465 PF11741 AMIN domain D521_0465 PF01520 N-acetylmuramoyl-L-alanine amidase D521_0466 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D521_0467 PF08331 Domain of unknown function (DUF1730) D521_0470 PF13183 4Fe-4S dicluster domain D521_0470 PF02754 Cysteine-rich domain D521_0471 PF00392 Bacterial regulatory proteins, gntR family D521_0471 PF07729 FCD domain D521_0472 PF00266 Aminotransferase class-V D521_0473 PF03928 Haem-degrading D521_0474 PF00271 Helicase conserved C-terminal domain D521_0474 PF00270 DEAD/DEAH box helicase D521_0475 PF00749 tRNA synthetases class I (E and Q), catalytic domain D521_0476 PF07733 Bacterial DNA polymerase III alpha NTPase domain D521_0476 PF01336 OB-fold nucleic acid binding domain D521_0476 PF14579 Helix-hairpin-helix motif D521_0476 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D521_0476 PF02811 PHP domain D521_0478 PF00535 Glycosyl transferase family 2 D521_0479 PF00535 Glycosyl transferase family 2 D521_0481 PF10150 Ribonuclease E/G family D521_0481 PF00575 S1 RNA binding domain D521_0482 PF02545 Maf-like protein D521_0483 PF02590 Predicted SPOUT methyltransferase D521_0485 PF01467 Cytidylyltransferase-like D521_0486 PF01218 Coproporphyrinogen III oxidase D521_0487 PF02844 Phosphoribosylglycinamide synthetase, N domain D521_0487 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D521_0487 PF02843 Phosphoribosylglycinamide synthetase, C domain D521_0488 PF01709 Transcriptional regulator D521_0489 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D521_0489 PF03466 LysR substrate binding domain D521_0492 PF00883 Cytosol aminopeptidase family, catalytic domain D521_0492 PF02789 Cytosol aminopeptidase family, N-terminal domain D521_0494 PF01790 Prolipoprotein diacylglyceryl transferase D521_0496 PF03401 Tripartite tricarboxylate transporter family receptor D521_0497 PF13193 AMP-binding enzyme C-terminal domain D521_0497 PF00501 AMP-binding enzyme D521_0498 PF01925 Sulfite exporter TauE/SafE D521_0501 PF00005 ABC transporter D521_0502 PF01032 FecCD transport family D521_0503 PF01497 Periplasmic binding protein D521_0504 PF07715 TonB-dependent Receptor Plug Domain D521_0504 PF00593 TonB dependent receptor D521_0506 PF00205 Thiamine pyrophosphate enzyme, central domain D521_0506 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D521_0506 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D521_0507 PF02515 CoA-transferase family III D521_0508 PF00989 PAS fold D521_0508 PF00512 His Kinase A (phospho-acceptor) domain D521_0508 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_0509 PF02515 CoA-transferase family III D521_0510 PF00551 Formyl transferase D521_0510 PF02911 Formyl transferase, C-terminal domain D521_0511 PF02569 Pantoate-beta-alanine ligase D521_0512 PF02616 Segregation and condensation protein ScpA D521_0514 PF01588 Putative tRNA binding domain D521_0514 PF09334 tRNA synthetases class I (M) D521_0515 PF02634 FdhD/NarQ family D521_0516 PF00692 dUTPase D521_0517 PF01276 Orn/Lys/Arg decarboxylase, major domain D521_0517 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D521_0517 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D521_0520 PF14698 Argininosuccinate lyase C-terminal D521_0520 PF00206 Lyase D521_0521 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D521_0521 PF03900 Porphobilinogen deaminase, C-terminal domain D521_0522 PF02602 Uroporphyrinogen-III synthase HemD D521_0523 PF04345 Chorismate lyase D521_0524 PF00270 DEAD/DEAH box helicase D521_0524 PF00271 Helicase conserved C-terminal domain D521_0525 PF00171 Aldehyde dehydrogenase family D521_0526 PF01625 Peptide methionine sulfoxide reductase D521_0527 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D521_0527 PF01243 Pyridoxamine 5'-phosphate oxidase D521_0528 PF00899 ThiF family D521_0529 PF00324 Amino acid permease D521_0530 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D521_0530 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D521_0531 PF01169 Uncharacterized protein family UPF0016 D521_0532 PF11940 Domain of unknown function (DUF3458) Ig-like fold D521_0532 PF01433 Peptidase family M1 domain D521_0532 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D521_0533 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D521_0534 PF02875 Mur ligase family, glutamate ligase domain D521_0534 PF08245 Mur ligase middle domain D521_0534 PF08443 RimK-like ATP-grasp domain D521_0535 PF08245 Mur ligase middle domain D521_0535 PF08443 RimK-like ATP-grasp domain D521_0535 PF02875 Mur ligase family, glutamate ligase domain D521_0536 PF00664 ABC transporter transmembrane region D521_0536 PF00005 ABC transporter D521_0538 PF03401 Tripartite tricarboxylate transporter family receptor D521_0540 PF01970 Tripartite tricarboxylate transporter TctA family D521_0544 PF00920 Dehydratase family D521_0545 PF00072 Response regulator receiver domain D521_0545 PF00196 Bacterial regulatory proteins, luxR family D521_0547 PF00543 Nitrogen regulatory protein P-II D521_0548 PF00795 Carbon-nitrogen hydrolase D521_0548 PF02540 NAD synthase D521_0549 PF00719 Inorganic pyrophosphatase D521_0552 PF07992 Pyridine nucleotide-disulphide oxidoreductase D521_0553 PF01580 FtsK/SpoIIIE family D521_0553 PF09397 Ftsk gamma domain D521_0553 PF17854 FtsK alpha domain D521_0553 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D521_0554 PF03548 Outer membrane lipoprotein carrier protein LolA D521_0555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D521_0555 PF02403 Seryl-tRNA synthetase N-terminal domain D521_0556 PF00270 DEAD/DEAH box helicase D521_0556 PF09382 RQC domain D521_0556 PF16124 RecQ zinc-binding D521_0556 PF00271 Helicase conserved C-terminal domain D521_0556 PF00570 HRDC domain D521_0558 PF08402 TOBE domain D521_0558 PF00005 ABC transporter D521_0559 PF00528 Binding-protein-dependent transport system inner membrane component D521_0563 PF04325 Protein of unknown function (DUF465) D521_0564 PF03831 PhnA domain D521_0564 PF08274 PhnA Zinc-Ribbon D521_0566 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV D521_0569 PF00296 Luciferase-like monooxygenase D521_0571 PF07152 YaeQ protein D521_0573 PF04055 Radical SAM superfamily D521_0573 PF06969 HemN C-terminal domain D521_0574 PF03922 OmpW family D521_0577 PF02230 Phospholipase/Carboxylesterase D521_0579 PF01556 DnaJ C terminal domain D521_0579 PF00226 DnaJ domain D521_0580 PF08666 SAF domain D521_0580 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D521_0581 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D521_0581 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D521_0582 PF08450 SMP-30/Gluconolactonase/LRE-like region D521_0583 PF00155 Aminotransferase class I and II D521_0583 PF00392 Bacterial regulatory proteins, gntR family D521_0584 PF02615 Malate/L-lactate dehydrogenase D521_0585 PF03401 Tripartite tricarboxylate transporter family receptor D521_0586 PF02678 Pirin D521_0586 PF17954 Quercetinase C-terminal cupin domain D521_0589 PF10518 TAT (twin-arginine translocation) pathway signal sequence D521_0589 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding D521_0589 PF07992 Pyridine nucleotide-disulphide oxidoreductase D521_0591 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D521_0594 PF03401 Tripartite tricarboxylate transporter family receptor D521_0595 PF03328 HpcH/HpaI aldolase/citrate lyase family D521_0600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D521_0601 PF00528 Binding-protein-dependent transport system inner membrane component D521_0602 PF12911 N-terminal TM domain of oligopeptide transport permease C D521_0602 PF00528 Binding-protein-dependent transport system inner membrane component D521_0603 PF00005 ABC transporter D521_0603 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D521_0604 PF00877 NlpC/P60 family D521_0606 PF01734 Patatin-like phospholipase D521_0607 PF04079 Segregation and condensation complex subunit ScpB D521_0608 PF01479 S4 domain D521_0608 PF00849 RNA pseudouridylate synthase D521_0609 PF02576 RimP N-terminal domain D521_0609 PF17384 RimP C-terminal SH3 domain D521_0610 PF08529 NusA N-terminal domain D521_0610 PF13184 NusA-like KH domain D521_0611 PF00009 Elongation factor Tu GTP binding domain D521_0611 PF11987 Translation-initiation factor 2 D521_0611 PF08364 Bacterial translation initiation factor IF-2 associated region D521_0611 PF04760 Translation initiation factor IF-2, N-terminal region D521_0612 PF02033 Ribosome-binding factor A D521_0613 PF01509 TruB family pseudouridylate synthase (N terminal domain) D521_0613 PF09157 Pseudouridine synthase II TruB, C-terminal D521_0613 PF16198 tRNA pseudouridylate synthase B C-terminal domain D521_0615 PF00575 S1 RNA binding domain D521_0615 PF16921 Tex protein YqgF-like domain D521_0615 PF17674 HHH domain D521_0615 PF09371 Tex-like protein N-terminal domain D521_0621 PF01758 Sodium Bile acid symporter family D521_0622 PF03358 NADPH-dependent FMN reductase D521_0624 PF00582 Universal stress protein family D521_0626 PF00849 RNA pseudouridylate synthase D521_0628 PF13188 PAS domain D521_0628 PF03707 Bacterial signalling protein N terminal repeat D521_0628 PF00563 EAL domain D521_0628 PF00990 Diguanylate cyclase, GGDEF domain D521_0630 PF03707 Bacterial signalling protein N terminal repeat D521_0630 PF00990 Diguanylate cyclase, GGDEF domain D521_0630 PF00563 EAL domain D521_0632 PF00072 Response regulator receiver domain D521_0633 PF01207 Dihydrouridine synthase (Dus) D521_0634 PF01966 HD domain D521_0634 PF00072 Response regulator receiver domain D521_0640 PF04972 BON domain D521_0640 PF00263 Bacterial type II and III secretion system protein D521_0640 PF13629 Pilus formation protein N terminal region D521_0643 PF00437 Type II/IV secretion system protein D521_0646 PF00990 Diguanylate cyclase, GGDEF domain D521_0646 PF05230 MASE2 domain D521_0647 PF03707 Bacterial signalling protein N terminal repeat D521_0647 PF00563 EAL domain D521_0647 PF00990 Diguanylate cyclase, GGDEF domain D521_0648 PF03781 Sulfatase-modifying factor enzyme 1 D521_0649 PF00990 Diguanylate cyclase, GGDEF domain D521_0649 PF03707 Bacterial signalling protein N terminal repeat D521_0649 PF00563 EAL domain D521_0651 PF01966 HD domain D521_0652 PF02321 Outer membrane efflux protein D521_0653 PF00664 ABC transporter transmembrane region D521_0653 PF00005 ABC transporter D521_0654 PF13533 Biotin-lipoyl like D521_0655 PF00072 Response regulator receiver domain D521_0655 PF00196 Bacterial regulatory proteins, luxR family D521_0664 PF00072 Response regulator receiver domain D521_0665 PF05970 PIF1-like helicase D521_0665 PF14493 Helix-turn-helix domain D521_0666 PF12441 CopG antitoxin of type II toxin-antitoxin system D521_0669 PF03401 Tripartite tricarboxylate transporter family receptor D521_0670 PF00202 Aminotransferase class-III D521_0672 PF03788 LrgA family D521_0673 PF01799 [2Fe-2S] binding domain D521_0673 PF00111 2Fe-2S iron-sulfur cluster binding domain D521_0674 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D521_0674 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D521_0679 PF00551 Formyl transferase D521_0682 PF01804 Penicillin amidase D521_0684 PF02472 Biopolymer transport protein ExbD/TolR D521_0685 PF01618 MotA/TolQ/ExbB proton channel family D521_0687 PF01177 Asp/Glu/Hydantoin racemase D521_0689 PF16177 Acetyl-coenzyme A synthetase N-terminus D521_0689 PF00501 AMP-binding enzyme D521_0689 PF13193 AMP-binding enzyme C-terminal domain D521_0694 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D521_0694 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D521_0694 PF10531 SLBB domain D521_0695 PF01568 Molydopterin dinucleotide binding domain D521_0695 PF00384 Molybdopterin oxidoreductase D521_0695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D521_0697 PF02910 Fumarate reductase flavoprotein C-term D521_0697 PF00890 FAD binding domain D521_0699 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D521_0699 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D521_0700 PF02445 Quinolinate synthetase A protein D521_0701 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D521_0701 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D521_0701 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D521_0701 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D521_0702 PF00342 Phosphoglucose isomerase D521_0703 PF01266 FAD dependent oxidoreductase D521_0703 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D521_0707 PF09086 Domain of unknown function (DUF1924) D521_0710 PF00072 Response regulator receiver domain D521_0710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_0710 PF08448 PAS fold D521_0710 PF13426 PAS domain D521_0710 PF00512 His Kinase A (phospho-acceptor) domain D521_0711 PF00753 Metallo-beta-lactamase superfamily D521_0711 PF14863 Alkyl sulfatase dimerisation D521_0711 PF14864 Alkyl sulfatase C-terminal D521_0712 PF02515 CoA-transferase family III D521_0713 PF03401 Tripartite tricarboxylate transporter family receptor D521_0714 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D521_0714 PF00378 Enoyl-CoA hydratase/isomerase D521_0714 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D521_0715 PF06969 HemN C-terminal domain D521_0715 PF04055 Radical SAM superfamily D521_0716 PF01725 Ham1 family D521_0717 PF03725 3' exoribonuclease family, domain 2 D521_0717 PF01138 3' exoribonuclease family, domain 1 D521_0718 PF03755 YicC-like family, N-terminal region D521_0718 PF08340 Domain of unknown function (DUF1732) D521_0720 PF01192 RNA polymerase Rpb6 D521_0721 PF13291 ACT domain D521_0721 PF04607 Region found in RelA / SpoT proteins D521_0721 PF02824 TGS domain D521_0722 PF03449 Transcription elongation factor, N-terminal D521_0722 PF01272 Transcription elongation factor, GreA/GreB, C-term D521_0723 PF02405 Permease MlaE D521_0724 PF00005 ABC transporter D521_0725 PF02470 MlaD protein D521_0727 PF00106 short chain dehydrogenase D521_0733 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D521_0733 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D521_0733 PF00205 Thiamine pyrophosphate enzyme, central domain D521_0734 PF10369 Small subunit of acetolactate synthase D521_0735 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D521_0735 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D521_0736 PF02666 Phosphatidylserine decarboxylase D521_0737 PF01066 CDP-alcohol phosphatidyltransferase D521_0738 PF00682 HMGL-like D521_0738 PF08502 LeuA allosteric (dimerisation) domain D521_0740 PF00312 Ribosomal protein S15 D521_0742 PF00013 KH domain D521_0742 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D521_0742 PF00575 S1 RNA binding domain D521_0742 PF03725 3' exoribonuclease family, domain 2 D521_0742 PF01138 3' exoribonuclease family, domain 1 D521_0743 PF08659 KR domain D521_0743 PF14765 Polyketide synthase dehydratase D521_0743 PF00550 Phosphopantetheine attachment site D521_0743 PF00698 Acyl transferase domain D521_0743 PF00109 Beta-ketoacyl synthase, N-terminal domain D521_0743 PF16197 Ketoacyl-synthetase C-terminal extension D521_0743 PF00107 Zinc-binding dehydrogenase D521_0743 PF08240 Alcohol dehydrogenase GroES-like domain D521_0743 PF02801 Beta-ketoacyl synthase, C-terminal domain D521_0744 PF00121 Triosephosphate isomerase D521_0745 PF03840 Preprotein translocase SecG subunit D521_0746 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D521_0747 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D521_0748 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D521_0749 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D521_0751 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D521_0751 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D521_0751 PF10531 SLBB domain D521_0752 PF00384 Molybdopterin oxidoreductase D521_0752 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal D521_0752 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D521_0753 PF00146 NADH dehydrogenase D521_0754 PF12838 4Fe-4S dicluster domain D521_0755 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D521_0756 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D521_0757 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D521_0757 PF00361 Proton-conducting membrane transporter D521_0758 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus D521_0758 PF00361 Proton-conducting membrane transporter D521_0759 PF00361 Proton-conducting membrane transporter D521_0760 PF00293 NUDIX domain D521_0762 PF00497 Bacterial extracellular solute-binding proteins, family 3 D521_0763 PF00528 Binding-protein-dependent transport system inner membrane component D521_0764 PF00005 ABC transporter D521_0766 PF00171 Aldehyde dehydrogenase family D521_0767 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D521_0769 PF00180 Isocitrate/isopropylmalate dehydrogenase D521_0770 PF00929 Exonuclease D521_0771 PF00873 AcrB/AcrD/AcrF family D521_0772 PF13533 Biotin-lipoyl like D521_0773 PF00075 RNase H D521_0774 PF13847 Methyltransferase domain D521_0776 PF01464 Transglycosylase SLT domain D521_0776 PF01476 LysM domain D521_0777 PF16177 Acetyl-coenzyme A synthetase N-terminus D521_0777 PF00501 AMP-binding enzyme D521_0777 PF13193 AMP-binding enzyme C-terminal domain D521_0778 PF00117 Glutamine amidotransferase class-I D521_0778 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D521_0779 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D521_0779 PF02142 MGS-like domain D521_0779 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D521_0780 PF01272 Transcription elongation factor, GreA/GreB, C-term D521_0780 PF03449 Transcription elongation factor, N-terminal D521_0783 PF01728 FtsJ-like methyltransferase D521_0784 PF06480 FtsH Extracellular D521_0784 PF17862 AAA+ lid domain D521_0784 PF01434 Peptidase family M41 D521_0784 PF00004 ATPase family associated with various cellular activities (AAA) D521_0785 PF00809 Pterin binding enzyme D521_0786 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D521_0786 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D521_0786 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D521_0786 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D521_0787 PF12849 PBP superfamily domain D521_0788 PF00528 Binding-protein-dependent transport system inner membrane component D521_0789 PF00528 Binding-protein-dependent transport system inner membrane component D521_0790 PF00005 ABC transporter D521_0791 PF01895 PhoU domain D521_0792 PF00486 Transcriptional regulatory protein, C terminal D521_0792 PF00072 Response regulator receiver domain D521_0793 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_0793 PF00512 His Kinase A (phospho-acceptor) domain D521_0793 PF11808 Phosphate regulon sensor protein PhoR D521_0793 PF00989 PAS fold D521_0795 PF02308 MgtC family D521_0796 PF01544 CorA-like Mg2+ transporter protein D521_0800 PF00245 Alkaline phosphatase D521_0801 PF02308 MgtC family D521_0803 PF02541 Ppx/GppA phosphatase family D521_0805 PF01219 Prokaryotic diacylglycerol kinase D521_0806 PF13439 Glycosyltransferase Family 4 D521_0806 PF00534 Glycosyl transferases group 1 D521_0809 PF03976 Polyphosphate kinase 2 (PPK2) D521_0813 PF07715 TonB-dependent Receptor Plug Domain D521_0813 PF00593 TonB dependent receptor D521_0819 PF00561 alpha/beta hydrolase fold D521_0820 PF03976 Polyphosphate kinase 2 (PPK2) D521_0822 PF07690 Major Facilitator Superfamily D521_0825 PF03358 NADPH-dependent FMN reductase D521_0826 PF03631 Virulence factor BrkB D521_0828 PF01264 Chorismate synthase D521_0829 PF12832 MFS_1 like family D521_0831 PF01144 Coenzyme A transferase D521_0832 PF01144 Coenzyme A transferase D521_0833 PF01545 Cation efflux family D521_0834 PF13291 ACT domain D521_0834 PF04607 Region found in RelA / SpoT proteins D521_0834 PF02824 TGS domain D521_0835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D521_0835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D521_0835 PF02824 TGS domain D521_0835 PF03129 Anticodon binding domain D521_0836 PF05198 Translation initiation factor IF-3, N-terminal domain D521_0836 PF00707 Translation initiation factor IF-3, C-terminal domain D521_0837 PF01632 Ribosomal protein L35 D521_0838 PF00453 Ribosomal protein L20 D521_0839 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D521_0839 PF01409 tRNA synthetases class II core domain (F) D521_0841 PF00216 Bacterial DNA-binding protein D521_0844 PF00816 H-NS histone family D521_0846 PF02779 Transketolase, pyrimidine binding domain D521_0846 PF16870 2-oxoglutarate dehydrogenase C-terminal D521_0846 PF00676 Dehydrogenase E1 component D521_0846 PF16078 2-oxoglutarate dehydrogenase N-terminus D521_0847 PF02817 e3 binding domain D521_0847 PF00364 Biotin-requiring enzyme D521_0847 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D521_0848 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D521_0848 PF07992 Pyridine nucleotide-disulphide oxidoreductase D521_0849 PF03969 AFG1-like ATPase D521_0850 PF02811 PHP domain D521_0851 PF00579 tRNA synthetases class I (W and Y) D521_0853 PF00701 Dihydrodipicolinate synthetase family D521_0854 PF06804 NlpB/DapX lipoprotein D521_0856 PF08007 Cupin superfamily protein D521_0857 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D521_0858 PF00132 Bacterial transferase hexapeptide (six repeats) D521_0859 PF00588 SpoU rRNA Methylase family D521_0860 PF00459 Inositol monophosphatase family D521_0861 PF00149 Calcineurin-like phosphoesterase D521_0862 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D521_0864 PF01406 tRNA synthetases class I (C) catalytic domain D521_0864 PF09190 DALR domain D521_0866 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D521_0867 PF09179 TilS substrate binding domain D521_0867 PF11734 TilS substrate C-terminal domain D521_0867 PF01171 PP-loop family D521_0868 PF13840 ACT domain D521_0868 PF01842 ACT domain D521_0868 PF00696 Amino acid kinase family D521_0869 PF01425 Amidase D521_0875 PF00156 Phosphoribosyl transferase domain D521_0876 PF01048 Phosphorylase superfamily D521_0877 PF13193 AMP-binding enzyme C-terminal domain D521_0877 PF00501 AMP-binding enzyme D521_0882 PF02558 Ketopantoate reductase PanE/ApbA D521_0882 PF08546 Ketopantoate reductase PanE/ApbA C terminal D521_0883 PF03466 LysR substrate binding domain D521_0883 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D521_0884 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D521_0884 PF00205 Thiamine pyrophosphate enzyme, central domain D521_0884 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D521_0885 PF01261 Xylose isomerase-like TIM barrel D521_0886 PF08543 Phosphomethylpyrimidine kinase D521_0887 PF02581 Thiamine monophosphate synthase D521_0888 PF05690 Thiazole biosynthesis protein ThiG D521_0890 PF01266 FAD dependent oxidoreductase D521_0891 PF01964 Radical SAM ThiC family D521_0891 PF13667 ThiC-associated domain D521_0895 PF02515 CoA-transferase family III D521_0896 PF00204 DNA gyrase B D521_0896 PF01751 Toprim domain D521_0896 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_0896 PF00986 DNA gyrase B subunit, carboxyl terminus D521_0897 PF00521 DNA gyrase/topoisomerase IV, subunit A D521_0898 PF13478 XdhC Rossmann domain D521_0898 PF02625 XdhC and CoxI family D521_0899 PF00132 Bacterial transferase hexapeptide (six repeats) D521_0899 PF12804 MobA-like NTP transferase domain D521_0902 PF01434 Peptidase family M41 D521_0902 PF00004 ATPase family associated with various cellular activities (AAA) D521_0902 PF17862 AAA+ lid domain D521_0904 PF00034 Cytochrome c D521_0905 PF07729 FCD domain D521_0905 PF00392 Bacterial regulatory proteins, gntR family D521_0908 PF01039 Carboxyl transferase domain D521_0909 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D521_0909 PF00289 Biotin carboxylase, N-terminal domain D521_0909 PF02785 Biotin carboxylase C-terminal domain D521_0911 PF00814 Glycoprotease family D521_0912 PF00583 Acetyltransferase (GNAT) family D521_0914 PF07690 Major Facilitator Superfamily D521_0915 PF00842 Alanine racemase, C-terminal domain D521_0915 PF01168 Alanine racemase, N-terminal domain D521_0916 PF13525 Outer membrane lipoprotein D521_0917 PF01479 S4 domain D521_0917 PF00849 RNA pseudouridylate synthase D521_0919 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D521_0920 PF00106 short chain dehydrogenase D521_0921 PF05233 PHB accumulation regulatory domain D521_0921 PF07879 PHB/PHA accumulation regulator DNA-binding domain D521_0922 PF18693 TRAM domain D521_0922 PF04055 Radical SAM superfamily D521_0922 PF00919 Uncharacterized protein family UPF0004 D521_0923 PF00108 Thiolase, N-terminal domain D521_0923 PF02803 Thiolase, C-terminal domain D521_0925 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D521_0926 PF00270 DEAD/DEAH box helicase D521_0926 PF02559 CarD-like/TRCF domain D521_0926 PF00271 Helicase conserved C-terminal domain D521_0926 PF03461 TRCF domain D521_0926 PF17757 UvrB interaction domain D521_0927 PF02542 YgbB family D521_0929 PF05697 Bacterial trigger factor protein (TF) D521_0929 PF05698 Bacterial trigger factor protein (TF) C-terminus D521_0929 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D521_0930 PF00574 Clp protease D521_0931 PF07724 AAA domain (Cdc48 subfamily) D521_0931 PF06689 ClpX C4-type zinc finger D521_0931 PF10431 C-terminal, D2-small domain, of ClpB protein D521_0932 PF00004 ATPase family associated with various cellular activities (AAA) D521_0932 PF05362 Lon protease (S16) C-terminal proteolytic domain D521_0932 PF02190 ATP-dependent protease La (LON) substrate-binding domain D521_0934 PF13472 GDSL-like Lipase/Acylhydrolase family D521_0935 PF00005 ABC transporter D521_0936 PF02769 AIR synthase related protein, C-terminal domain D521_0936 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D521_0936 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D521_0939 PF00330 Aconitase family (aconitate hydratase) D521_0939 PF06434 Aconitate hydratase 2 N-terminus D521_0939 PF11791 Aconitate B N-terminal domain D521_0940 PF00117 Glutamine amidotransferase class-I D521_0940 PF06418 CTP synthase N-terminus D521_0941 PF00793 DAHP synthetase I family D521_0942 PF03952 Enolase, N-terminal domain D521_0942 PF00113 Enolase, C-terminal TIM barrel domain D521_0943 PF04977 Septum formation initiator D521_0944 PF01430 Hsp33 protein D521_0945 PF00749 tRNA synthetases class I (E and Q), catalytic domain D521_0946 PF01435 Peptidase family M48 D521_0953 PF01026 TatD related DNase D521_0954 PF09115 DNA polymerase III, delta subunit, C terminal D521_0955 PF02223 Thymidylate kinase D521_0956 PF01571 Aminomethyltransferase folate-binding domain D521_0957 PF02618 YceG-like family D521_0960 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D521_0961 PF01641 SelR domain D521_0962 PF04279 Intracellular septation protein A D521_0965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D521_0968 PF00005 ABC transporter D521_0968 PF12848 ABC transporter D521_0970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D521_0970 PF02770 Acyl-CoA dehydrogenase, middle domain D521_0970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D521_0971 PF00581 Rhodanese-like domain D521_0972 PF04273 Putative phosphatase (DUF442) D521_0972 PF00753 Metallo-beta-lactamase superfamily D521_0974 PF04143 Sulphur transport D521_0977 PF00753 Metallo-beta-lactamase superfamily D521_0979 PF00149 Calcineurin-like phosphoesterase D521_0979 PF02872 5'-nucleotidase, C-terminal domain D521_0984 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D521_0985 PF00174 Oxidoreductase molybdopterin binding domain D521_0986 PF01022 Bacterial regulatory protein, arsR family D521_0987 PF00528 Binding-protein-dependent transport system inner membrane component D521_0988 PF00005 ABC transporter D521_0988 PF17850 CysA C-terminal regulatory domain D521_0988 PF12857 TOBE-like domain D521_0989 PF01355 High potential iron-sulfur protein D521_0991 PF01053 Cys/Met metabolism PLP-dependent enzyme D521_0992 PF00156 Phosphoribosyl transferase domain D521_0995 PF02875 Mur ligase family, glutamate ligase domain D521_0995 PF08245 Mur ligase middle domain D521_0996 PF01039 Carboxyl transferase domain D521_0996 PF17848 Acetyl-coA carboxylase zinc finger domain D521_0997 PF00290 Tryptophan synthase alpha chain D521_0998 PF00291 Pyridoxal-phosphate dependent enzyme D521_0999 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D521_1000 PF01416 tRNA pseudouridine synthase D521_1002 PF02774 Semialdehyde dehydrogenase, dimerisation domain D521_1002 PF01118 Semialdehyde dehydrogenase, NAD binding domain D521_1003 PF00180 Isocitrate/isopropylmalate dehydrogenase D521_1004 PF00694 Aconitase C-terminal domain D521_1006 PF00330 Aconitase family (aconitate hydratase) D521_1007 PF00285 Citrate synthase, C-terminal domain D521_1008 PF03937 Flavinator of succinate dehydrogenase D521_1009 PF13085 2Fe-2S iron-sulfur cluster binding domain D521_1010 PF00890 FAD binding domain D521_1010 PF02910 Fumarate reductase flavoprotein C-term D521_1011 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D521_1012 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D521_1013 PF00392 Bacterial regulatory proteins, gntR family D521_1013 PF07702 UTRA domain D521_1014 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D521_1014 PF00056 lactate/malate dehydrogenase, NAD binding domain D521_1017 PF03883 Peroxide stress protein YaaA D521_1018 PF00155 Aminotransferase class I and II D521_1019 PF02798 Glutathione S-transferase, N-terminal domain D521_1019 PF00043 Glutathione S-transferase, C-terminal domain D521_1020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D521_1020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D521_1022 PF00004 ATPase family associated with various cellular activities (AAA) D521_1022 PF12002 MgsA AAA+ ATPase C terminal D521_1022 PF16193 AAA C-terminal domain D521_1024 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D521_1025 PF04715 Anthranilate synthase component I, N terminal region D521_1025 PF00425 chorismate binding enzyme D521_1027 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D521_1028 PF04376 Arginine-tRNA-protein transferase, N terminus D521_1028 PF04377 Arginine-tRNA-protein transferase, C terminus D521_1029 PF01180 Dihydroorotate dehydrogenase D521_1030 PF09339 IclR helix-turn-helix domain D521_1030 PF01614 Bacterial transcriptional regulator D521_1031 PF00768 D-alanyl-D-alanine carboxypeptidase D521_1033 PF09361 Phasin protein D521_1034 PF07992 Pyridine nucleotide-disulphide oxidoreductase D521_1034 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D521_1035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D521_1035 PF02817 e3 binding domain D521_1035 PF00364 Biotin-requiring enzyme D521_1036 PF17831 Pyruvate dehydrogenase E1 component middle domain D521_1036 PF00456 Transketolase, thiamine diphosphate binding domain D521_1037 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_1037 PF00512 His Kinase A (phospho-acceptor) domain D521_1037 PF00989 PAS fold D521_1038 PF00072 Response regulator receiver domain D521_1038 PF00196 Bacterial regulatory proteins, luxR family D521_1039 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D521_1039 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D521_1040 PF01432 Peptidase family M3 D521_1041 PF03372 Endonuclease/Exonuclease/phosphatase family D521_1042 PF00158 Sigma-54 interaction domain D521_1042 PF02954 Bacterial regulatory protein, Fis family D521_1042 PF00072 Response regulator receiver domain D521_1043 PF00512 His Kinase A (phospho-acceptor) domain D521_1043 PF00989 PAS fold D521_1043 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_1045 PF02464 Competence-damaged protein D521_1045 PF00994 Probable molybdopterin binding domain D521_1048 PF00457 Glycosyl hydrolases family 11 D521_1048 PF03422 Carbohydrate binding module (family 6) D521_1048 PF01522 Polysaccharide deacetylase D521_1050 PF04408 Helicase associated domain (HA2) D521_1050 PF00270 DEAD/DEAH box helicase D521_1050 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D521_1050 PF00271 Helicase conserved C-terminal domain D521_1050 PF11898 Domain of unknown function (DUF3418) D521_1051 PF00583 Acetyltransferase (GNAT) family D521_1051 PF00696 Amino acid kinase family D521_1052 PF04362 Bacterial Fe(2+) trafficking D521_1053 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D521_1054 PF00923 Transaldolase/Fructose-6-phosphate aldolase D521_1055 PF00085 Thioredoxin D521_1057 PF08032 RNA 2'-O ribose methyltransferase substrate binding D521_1057 PF00588 SpoU rRNA Methylase family D521_1058 PF00575 S1 RNA binding domain D521_1058 PF00773 RNB domain D521_1058 PF08206 Ribonuclease B OB domain D521_1058 PF08461 Ribonuclease R winged-helix domain D521_1058 PF17876 Cold shock domain D521_1060 PF01738 Dienelactone hydrolase family D521_1061 PF07690 Major Facilitator Superfamily D521_1065 PF01274 Malate synthase D521_1066 PF00709 Adenylosuccinate synthetase D521_1067 PF13393 Histidyl-tRNA synthetase D521_1068 PF01145 SPFH domain / Band 7 family D521_1069 PF12221 Bacterial membrane protein N terminal D521_1069 PF01145 SPFH domain / Band 7 family D521_1070 PF01926 50S ribosome-binding GTPase D521_1070 PF13167 GTP-binding GTPase N-terminal D521_1070 PF16360 GTP-binding GTPase Middle Region D521_1071 PF17209 Hfq protein D521_1072 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D521_1072 PF01926 50S ribosome-binding GTPase D521_1073 PF13360 PQQ-like domain D521_1075 PF03129 Anticodon binding domain D521_1075 PF13393 Histidyl-tRNA synthetase D521_1076 PF04551 GcpE protein D521_1077 PF04055 Radical SAM superfamily D521_1078 PF00334 Nucleoside diphosphate kinase D521_1079 PF01027 Inhibitor of apoptosis-promoting Bax1 D521_1080 PF05958 tRNA (Uracil-5-)-methyltransferase D521_1082 PF01551 Peptidase family M23 D521_1082 PF01476 LysM domain D521_1084 PF01975 Survival protein SurE D521_1085 PF00873 AcrB/AcrD/AcrF family D521_1090 PF04221 RelB antitoxin D521_1091 PF02132 RecR protein D521_1091 PF13662 Toprim domain D521_1092 PF02575 YbaB/EbfC DNA-binding family D521_1093 PF12170 DNA polymerase III tau subunit V interacting with alpha D521_1093 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D521_1093 PF12169 DNA polymerase III subunits gamma and tau domain III D521_1096 PF01230 HIT domain D521_1100 PF00929 Exonuclease D521_1101 PF03350 Uncharacterized protein family, UPF0114 D521_1103 PF00817 impB/mucB/samB family D521_1103 PF11799 impB/mucB/samB family C-terminal domain D521_1103 PF11798 IMS family HHH motif D521_1103 PF13438 Domain of unknown function (DUF4113) D521_1104 PF00717 Peptidase S24-like D521_1108 PF12705 PD-(D/E)XK nuclease superfamily D521_1108 PF00580 UvrD/REP helicase N-terminal domain D521_1108 PF13361 UvrD-like helicase C-terminal domain D521_1110 PF00085 Thioredoxin D521_1111 PF07498 Rho termination factor, N-terminal domain D521_1111 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D521_1111 PF07497 Rho termination factor, RNA-binding domain D521_1112 PF01197 Ribosomal protein L31 D521_1114 PF01554 MatE D521_1117 PF03401 Tripartite tricarboxylate transporter family receptor D521_1118 PF02600 Disulfide bond formation protein DsbB D521_1120 PF00378 Enoyl-CoA hydratase/isomerase D521_1121 PF00561 alpha/beta hydrolase fold D521_1122 PF01557 Fumarylacetoacetate (FAA) hydrolase family D521_1123 PF04193 PQ loop repeat D521_1124 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D521_1125 PF07670 Nucleoside recognition D521_1125 PF02421 Ferrous iron transport protein B D521_1125 PF17910 FeoB cytosolic helical domain D521_1125 PF07664 Ferrous iron transport protein B C terminus D521_1125 PF04023 FeoA domain D521_1127 PF12728 Helix-turn-helix domain D521_1127 PF12727 PBP superfamily domain D521_1128 PF12849 PBP superfamily domain D521_1129 PF12849 PBP superfamily domain D521_1130 PF03459 TOBE domain D521_1132 PF13673 Acetyltransferase (GNAT) domain D521_1134 PF05995 Cysteine dioxygenase type I D521_1135 PF00270 DEAD/DEAH box helicase D521_1135 PF00271 Helicase conserved C-terminal domain D521_1136 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D521_1136 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D521_1139 PF00581 Rhodanese-like domain D521_1142 PF01152 Bacterial-like globin D521_1147 PF00753 Metallo-beta-lactamase superfamily D521_1147 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D521_1147 PF10996 Beta-Casp domain D521_1148 PF03853 YjeF-related protein N-terminus D521_1148 PF01256 Carbohydrate kinase D521_1149 PF00892 EamA-like transporter family D521_1152 PF00266 Aminotransferase class-V D521_1154 PF01070 FMN-dependent dehydrogenase D521_1158 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D521_1159 PF03466 LysR substrate binding domain D521_1159 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D521_1160 PF02915 Rubrerythrin D521_1161 PF00301 Rubredoxin D521_1162 PF18113 Rubredoxin binding C-terminal domain D521_1162 PF07992 Pyridine nucleotide-disulphide oxidoreductase D521_1164 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D521_1164 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D521_1165 PF00106 short chain dehydrogenase D521_1166 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D521_1166 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D521_1167 PF00111 2Fe-2S iron-sulfur cluster binding domain D521_1167 PF01799 [2Fe-2S] binding domain D521_1168 PF00941 FAD binding domain in molybdopterin dehydrogenase D521_1168 PF03450 CO dehydrogenase flavoprotein C-terminal domain D521_1170 PF00440 Bacterial regulatory proteins, tetR family D521_1174 PF02653 Branched-chain amino acid transport system / permease component D521_1175 PF11862 Domain of unknown function (DUF3382) D521_1175 PF02653 Branched-chain amino acid transport system / permease component D521_1176 PF00005 ABC transporter D521_1176 PF12399 Branched-chain amino acid ATP-binding cassette transporter D521_1177 PF00005 ABC transporter D521_1178 PF09335 SNARE associated Golgi protein D521_1179 PF02515 CoA-transferase family III D521_1180 PF13091 PLD-like domain D521_1180 PF13396 Phospholipase_D-nuclease N-terminal D521_1181 PF03372 Endonuclease/Exonuclease/phosphatase family D521_1183 PF00528 Binding-protein-dependent transport system inner membrane component D521_1184 PF00005 ABC transporter D521_1188 PF13247 4Fe-4S dicluster domain D521_1189 PF00384 Molybdopterin oxidoreductase D521_1189 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D521_1189 PF01568 Molydopterin dinucleotide binding domain D521_1195 PF10609 NUBPL iron-transfer P-loop NTPase D521_1196 PF01384 Phosphate transporter family D521_1197 PF01865 Protein of unknown function DUF47 D521_1199 PF00403 Heavy-metal-associated domain D521_1205 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D521_1207 PF02016 LD-carboxypeptidase N-terminal domain D521_1207 PF17676 LD-carboxypeptidase C-terminal domain D521_1208 PF14437 MafB19-like deaminase D521_1209 PF01242 6-pyruvoyl tetrahydropterin synthase D521_1214 PF04305 Protein of unknown function (DUF455) D521_1224 PF00958 GMP synthase C terminal domain D521_1224 PF00117 Glutamine amidotransferase class-I D521_1224 PF02540 NAD synthase D521_1225 PF00571 CBS domain D521_1225 PF00478 IMP dehydrogenase / GMP reductase domain D521_1226 PF03658 RnfH family Ubiquitin D521_1227 PF03364 Polyketide cyclase / dehydrase and lipid transport D521_1228 PF01668 SmpB protein D521_1229 PF14403 Circularly permuted ATP-grasp type 2 D521_1233 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D521_1233 PF02896 PEP-utilising enzyme, TIM barrel domain D521_1233 PF00391 PEP-utilising enzyme, mobile domain D521_1236 PF05683 Fumarase C-terminus D521_1237 PF05681 Fumarate hydratase (Fumerase) D521_1238 PF03401 Tripartite tricarboxylate transporter family receptor D521_1239 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D521_1239 PF03466 LysR substrate binding domain D521_1241 PF03401 Tripartite tricarboxylate transporter family receptor D521_1242 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D521_1242 PF02770 Acyl-CoA dehydrogenase, middle domain D521_1242 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D521_1243 PF09339 IclR helix-turn-helix domain D521_1244 PF02515 CoA-transferase family III D521_1246 PF08032 RNA 2'-O ribose methyltransferase substrate binding D521_1246 PF00588 SpoU rRNA Methylase family D521_1247 PF01351 Ribonuclease HII D521_1248 PF02684 Lipid-A-disaccharide synthetase D521_1249 PF00132 Bacterial transferase hexapeptide (six repeats) D521_1249 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D521_1250 PF07977 FabA-like domain D521_1251 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D521_1251 PF00132 Bacterial transferase hexapeptide (six repeats) D521_1253 PF07244 Surface antigen variable number repeat D521_1253 PF01103 Surface antigen D521_1254 PF02163 Peptidase family M50 D521_1254 PF17820 PDZ domain D521_1257 PF01255 Putative undecaprenyl diphosphate synthase D521_1258 PF01765 Ribosome recycling factor D521_1260 PF00889 Elongation factor TS D521_1261 PF00318 Ribosomal protein S2 D521_1262 PF00557 Metallopeptidase family M24 D521_1264 PF00293 NUDIX domain D521_1265 PF12826 Helix-hairpin-helix motif D521_1265 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D521_1265 PF03120 NAD-dependent DNA ligase OB-fold domain D521_1265 PF00533 BRCA1 C Terminus (BRCT) domain D521_1265 PF01653 NAD-dependent DNA ligase adenylation domain D521_1267 PF06470 SMC proteins Flexible Hinge Domain D521_1267 PF02463 RecF/RecN/SMC N terminal domain D521_1268 PF14602 Hexapeptide repeat of succinyl-transferase D521_1268 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D521_1268 PF00132 Bacterial transferase hexapeptide (six repeats) D521_1269 PF07687 Peptidase dimerisation domain D521_1269 PF01546 Peptidase family M20/M25/M40 D521_1270 PF05175 Methyltransferase small domain D521_1271 PF18073 Rubredoxin metal binding domain D521_1276 PF00176 SNF2 family N-terminal domain D521_1276 PF00271 Helicase conserved C-terminal domain D521_1278 PF00092 von Willebrand factor type A domain D521_1289 PF04539 Sigma-70 region 3 D521_1289 PF04542 Sigma-70 region 2 D521_1289 PF00140 Sigma-70 factor, region 1.2 D521_1289 PF04545 Sigma-70, region 4 D521_1289 PF04546 Sigma-70, non-essential region D521_1289 PF03979 Sigma-70 factor, region 1.1 D521_1310 PF05973 Phage derived protein Gp49-like (DUF891) D521_1311 PF13356 Arm DNA-binding domain D521_1311 PF00589 Phage integrase family D521_1316 PF00753 Metallo-beta-lactamase superfamily D521_1316 PF03772 Competence protein D521_1317 PF01026 TatD related DNase D521_1319 PF12704 MacB-like periplasmic core domain D521_1319 PF02687 FtsX-like permease family D521_1321 PF01368 DHH family D521_1321 PF02272 DHHA1 domain D521_1321 PF17768 RecJ OB domain D521_1322 PF03462 PCRF domain D521_1322 PF00472 RF-1 domain D521_1323 PF00152 tRNA synthetases class II (D, K and N) D521_1323 PF01336 OB-fold nucleic acid binding domain D521_1327 PF00175 Oxidoreductase NAD-binding domain D521_1327 PF00970 Oxidoreductase FAD-binding domain D521_1329 PF03601 Conserved hypothetical protein 698 D521_1330 PF00392 Bacterial regulatory proteins, gntR family D521_1330 PF07702 UTRA domain D521_1331 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D521_1332 PF08666 SAF domain D521_1333 PF02615 Malate/L-lactate dehydrogenase D521_1334 PF03401 Tripartite tricarboxylate transporter family receptor D521_1336 PF02910 Fumarate reductase flavoprotein C-term D521_1336 PF00890 FAD binding domain D521_1337 PF05683 Fumarase C-terminus D521_1338 PF05681 Fumarate hydratase (Fumerase) D521_1338 PF05683 Fumarase C-terminus D521_1341 PF13085 2Fe-2S iron-sulfur cluster binding domain D521_1341 PF13183 4Fe-4S dicluster domain D521_1345 PF11737 Protein of unknown function (DUF3300) D521_1346 PF00111 2Fe-2S iron-sulfur cluster binding domain D521_1347 PF00012 Hsp70 protein D521_1348 PF07743 HSCB C-terminal oligomerisation domain D521_1349 PF01521 Iron-sulphur cluster biosynthesis D521_1350 PF01592 NifU-like N terminal domain D521_1351 PF00266 Aminotransferase class-V D521_1352 PF02082 Transcriptional regulator D521_1354 PF00155 Aminotransferase class I and II D521_1356 PF04060 Putative Fe-S cluster D521_1357 PF10576 Iron-sulfur binding domain of endonuclease III D521_1357 PF00633 Helix-hairpin-helix motif D521_1357 PF00730 HhH-GPD superfamily base excision DNA repair protein D521_1360 PF10017 Histidine-specific methyltransferase, SAM-dependent D521_1361 PF02769 AIR synthase related protein, C-terminal domain D521_1361 PF00586 AIR synthase related protein, N-terminal domain D521_1364 PF00463 Isocitrate lyase family D521_1366 PF07724 AAA domain (Cdc48 subfamily) D521_1366 PF02861 Clp amino terminal domain, pathogenicity island component D521_1366 PF00004 ATPase family associated with various cellular activities (AAA) D521_1366 PF10431 C-terminal, D2-small domain, of ClpB protein D521_1366 PF17871 AAA lid domain D521_1367 PF01541 GIY-YIG catalytic domain D521_1379 PF01593 Flavin containing amine oxidoreductase D521_1380 PF02391 MoaE protein D521_1382 PF00994 Probable molybdopterin binding domain D521_1382 PF03454 MoeA C-terminal region (domain IV) D521_1382 PF03453 MoeA N-terminal region (domain I and II) D521_1383 PF14821 Threonine synthase N terminus D521_1383 PF00291 Pyridoxal-phosphate dependent enzyme D521_1384 PF01842 ACT domain D521_1384 PF00742 Homoserine dehydrogenase D521_1384 PF03447 Homoserine dehydrogenase, NAD binding domain D521_1385 PF00155 Aminotransferase class I and II D521_1386 PF04430 Protein of unknown function (DUF498/DUF598) D521_1387 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D521_1388 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D521_1389 PF00535 Glycosyl transferase family 2 D521_1390 PF02911 Formyl transferase, C-terminal domain D521_1390 PF00551 Formyl transferase D521_1390 PF01370 NAD dependent epimerase/dehydratase family D521_1391 PF01370 NAD dependent epimerase/dehydratase family D521_1391 PF02911 Formyl transferase, C-terminal domain D521_1391 PF00551 Formyl transferase D521_1392 PF01522 Polysaccharide deacetylase D521_1393 PF00578 AhpC/TSA family D521_1394 PF13638 PIN domain D521_1394 PF02562 PhoH-like protein D521_1395 PF00877 NlpC/P60 family D521_1396 PF05552 Conserved TM helix D521_1396 PF00924 Mechanosensitive ion channel D521_1398 PF00772 DnaB-like helicase N terminal domain D521_1398 PF03796 DnaB-like helicase C terminal domain D521_1399 PF01281 Ribosomal protein L9, N-terminal domain D521_1399 PF03948 Ribosomal protein L9, C-terminal domain D521_1400 PF01084 Ribosomal protein S18 D521_1402 PF01250 Ribosomal protein S6 D521_1403 PF17763 Glutaminase/Asparaginase C-terminal domain D521_1403 PF00710 Asparaginase, N-terminal D521_1404 PF00717 Peptidase S24-like D521_1404 PF01726 LexA DNA binding domain D521_1410 PF16363 GDP-mannose 4,6 dehydratase D521_1411 PF01066 CDP-alcohol phosphatidyltransferase D521_1413 PF02151 UvrB/uvrC motif D521_1413 PF08459 UvrC Helix-hairpin-helix N-terminal D521_1413 PF01541 GIY-YIG catalytic domain D521_1414 PF01132 Elongation factor P (EF-P) OB domain D521_1414 PF08207 Elongation factor P (EF-P) KOW-like domain D521_1414 PF09285 Elongation factor P, C-terminal D521_1415 PF00933 Glycosyl hydrolase family 3 N terminal domain D521_1416 PF01648 4'-phosphopantetheinyl transferase superfamily D521_1417 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D521_1418 PF11967 Recombination protein O N terminal D521_1418 PF02565 Recombination protein O C terminal D521_1419 PF07650 KH domain D521_1419 PF01926 50S ribosome-binding GTPase D521_1420 PF00035 Double-stranded RNA binding motif D521_1420 PF14622 Ribonuclease-III-like D521_1421 PF10502 Signal peptidase, peptidase S26 D521_1422 PF03144 Elongation factor Tu domain 2 D521_1422 PF00679 Elongation factor G C-terminus D521_1422 PF00009 Elongation factor Tu GTP binding domain D521_1422 PF06421 GTP-binding protein LepA C-terminus D521_1423 PF13180 PDZ domain D521_1424 PF00109 Beta-ketoacyl synthase, N-terminal domain D521_1424 PF02801 Beta-ketoacyl synthase, C-terminal domain D521_1426 PF00550 Phosphopantetheine attachment site D521_1428 PF00698 Acyl transferase domain D521_1429 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D521_1429 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D521_1430 PF02504 Fatty acid synthesis protein D521_1431 PF01783 Ribosomal L32p protein family D521_1432 PF02620 Large ribosomal RNA subunit accumulation protein YceD D521_1433 PF02545 Maf-like protein D521_1434 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D521_1435 PF06965 Na+/H+ antiporter 1 D521_1435 PF01343 Peptidase family S49 D521_1436 PF13419 Haloacid dehalogenase-like hydrolase D521_1437 PF00849 RNA pseudouridylate synthase D521_1437 PF01479 S4 domain D521_1438 PF12111 Polyribonucleotide phosphorylase C terminal D521_1438 PF10150 Ribonuclease E/G family D521_1438 PF00575 S1 RNA binding domain D521_1439 PF06463 Molybdenum Cofactor Synthesis C D521_1439 PF04055 Radical SAM superfamily D521_1440 PF12804 MobA-like NTP transferase domain D521_1441 PF03453 MoeA N-terminal region (domain I and II) D521_1441 PF03454 MoeA C-terminal region (domain IV) D521_1441 PF00994 Probable molybdopterin binding domain D521_1443 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D521_1443 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D521_1444 PF11953 Domain of unknown function (DUF3470) D521_1444 PF00037 4Fe-4S binding domain D521_1445 PF07992 Pyridine nucleotide-disulphide oxidoreductase D521_1446 PF00303 Thymidylate synthase D521_1447 PF00186 Dihydrofolate reductase D521_1448 PF03480 Bacterial extracellular solute-binding protein, family 7 D521_1449 PF01523 Putative modulator of DNA gyrase D521_1450 PF00994 Probable molybdopterin binding domain D521_1451 PF00929 Exonuclease D521_1452 PF16491 CAAX prenyl protease N-terminal, five membrane helices D521_1452 PF01435 Peptidase family M48 D521_1453 PF03186 CobD/Cbib protein D521_1453 PF17113 Regulatory signalling modulator protein AmpE D521_1454 PF00293 NUDIX domain D521_1455 PF01245 Ribosomal protein L19 D521_1456 PF01746 tRNA (Guanine-1)-methyltransferase D521_1457 PF01782 RimM N-terminal domain D521_1458 PF00886 Ribosomal protein S16 D521_1462 PF02770 Acyl-CoA dehydrogenase, middle domain D521_1462 PF12806 Acetyl-CoA dehydrogenase C-terminal like D521_1462 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D521_1462 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D521_1463 PF01012 Electron transfer flavoprotein domain D521_1464 PF13193 AMP-binding enzyme C-terminal domain D521_1464 PF00501 AMP-binding enzyme D521_1465 PF00850 Histone deacetylase domain D521_1466 PF13406 Transglycosylase SLT domain D521_1467 PF00291 Pyridoxal-phosphate dependent enzyme D521_1472 PF01370 NAD dependent epimerase/dehydratase family D521_1473 PF00294 pfkB family carbohydrate kinase D521_1474 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D521_1474 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D521_1474 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D521_1475 PF18073 Rubredoxin metal binding domain D521_1476 PF00216 Bacterial DNA-binding protein D521_1477 PF00575 S1 RNA binding domain D521_1478 PF02224 Cytidylate kinase D521_1479 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D521_1480 PF01842 ACT domain D521_1480 PF02153 Prephenate dehydrogenase D521_1482 PF01817 Chorismate mutase type II D521_1482 PF00800 Prephenate dehydratase D521_1482 PF01842 ACT domain D521_1483 PF00266 Aminotransferase class-V D521_1484 PF03989 DNA gyrase C-terminal domain, beta-propeller D521_1484 PF00521 DNA gyrase/topoisomerase IV, subunit A D521_1485 PF00691 OmpA family D521_1487 PF13419 Haloacid dehalogenase-like hydrolase D521_1488 PF00920 Dehydratase family D521_1489 PF03401 Tripartite tricarboxylate transporter family receptor D521_1498 PF03992 Antibiotic biosynthesis monooxygenase D521_1499 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D521_1499 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D521_1502 PF03401 Tripartite tricarboxylate transporter family receptor D521_1503 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D521_1504 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D521_1507 PF02163 Peptidase family M50 D521_1508 PF01322 Cytochrome C' D521_1510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D521_1510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D521_1511 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D521_1511 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D521_1512 PF00701 Dihydrodipicolinate synthetase family D521_1513 PF16868 NMT1-like family D521_1515 PF13378 Enolase C-terminal domain-like D521_1515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D521_1516 PF01476 LysM domain D521_1516 PF01551 Peptidase family M23 D521_1516 PF08525 Opacity-associated protein A N-terminal motif D521_1519 PF00916 Sulfate permease family D521_1519 PF01740 STAS domain D521_1521 PF00027 Cyclic nucleotide-binding domain D521_1521 PF13545 Crp-like helix-turn-helix domain D521_1524 PF13746 4Fe-4S dicluster domain D521_1524 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D521_1524 PF12801 4Fe-4S binding domain D521_1525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D521_1525 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D521_1528 PF00115 Cytochrome C and Quinol oxidase polypeptide I D521_1530 PF00403 Heavy-metal-associated domain D521_1533 PF16868 NMT1-like family D521_1536 PF03918 Cytochrome C biogenesis protein D521_1537 PF08534 Redoxin D521_1538 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D521_1538 PF01578 Cytochrome C assembly protein D521_1539 PF03100 CcmE D521_1541 PF01578 Cytochrome C assembly protein D521_1542 PF03379 CcmB protein D521_1543 PF00005 ABC transporter D521_1547 PF00107 Zinc-binding dehydrogenase D521_1547 PF08240 Alcohol dehydrogenase GroES-like domain D521_1549 PF04244 Deoxyribodipyrimidine photo-lyase-related protein D521_1557 PF00875 DNA photolyase D521_1557 PF03441 FAD binding domain of DNA photolyase D521_1559 PF00850 Histone deacetylase domain D521_1561 PF00027 Cyclic nucleotide-binding domain D521_1561 PF00520 Ion transport protein D521_1566 PF00690 Cation transporter/ATPase, N-terminus D521_1566 PF00689 Cation transporting ATPase, C-terminus D521_1567 PF00881 Nitroreductase family D521_1569 PF00875 DNA photolyase D521_1569 PF03441 FAD binding domain of DNA photolyase D521_1570 PF00255 Glutathione peroxidase D521_1571 PF01227 GTP cyclohydrolase I D521_1574 PF07969 Amidohydrolase family D521_1577 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family D521_1578 PF00311 Phosphoenolpyruvate carboxylase D521_1579 PF03466 LysR substrate binding domain D521_1579 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D521_1580 PF01012 Electron transfer flavoprotein domain D521_1580 PF00766 Electron transfer flavoprotein FAD-binding domain D521_1581 PF01012 Electron transfer flavoprotein domain D521_1586 PF01527 Transposase D521_1589 PF01527 Transposase D521_1597 PF00665 Integrase core domain D521_1597 PF13936 Helix-turn-helix domain D521_1601 PF00766 Electron transfer flavoprotein FAD-binding domain D521_1601 PF01012 Electron transfer flavoprotein domain D521_1602 PF01012 Electron transfer flavoprotein domain D521_1603 PF02770 Acyl-CoA dehydrogenase, middle domain D521_1603 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D521_1603 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D521_1604 PF02515 CoA-transferase family III D521_1608 PF00392 Bacterial regulatory proteins, gntR family D521_1608 PF07729 FCD domain D521_1610 PF01266 FAD dependent oxidoreductase D521_1616 PF01965 DJ-1/PfpI family D521_1616 PF12833 Helix-turn-helix domain D521_1621 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family D521_1625 PF02470 MlaD protein D521_1626 PF04403 Paraquat-inducible protein A D521_1632 PF00486 Transcriptional regulatory protein, C terminal D521_1632 PF00072 Response regulator receiver domain D521_1633 PF07689 KaiB domain D521_1633 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_1643 PF02899 Phage integrase, N-terminal SAM-like domain D521_1643 PF00589 Phage integrase family D521_1660 PF00127 Copper binding proteins, plastocyanin/azurin family D521_1661 PF07731 Multicopper oxidase D521_1661 PF07732 Multicopper oxidase D521_1669 PF00403 Heavy-metal-associated domain D521_1670 PF13411 MerR HTH family regulatory protein D521_1672 PF00873 AcrB/AcrD/AcrF family D521_1673 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D521_1673 PF00529 HlyD membrane-fusion protein of T1SS D521_1683 PF00392 Bacterial regulatory proteins, gntR family D521_1683 PF07729 FCD domain D521_1684 PF00083 Sugar (and other) transporter D521_1684 PF07690 Major Facilitator Superfamily D521_1686 PF03979 Sigma-70 factor, region 1.1 D521_1686 PF04546 Sigma-70, non-essential region D521_1686 PF00140 Sigma-70 factor, region 1.2 D521_1686 PF04542 Sigma-70 region 2 D521_1686 PF04539 Sigma-70 region 3 D521_1686 PF04545 Sigma-70, region 4 D521_1688 PF01807 CHC2 zinc finger D521_1688 PF08275 DNA primase catalytic core, N-terminal domain D521_1688 PF08278 DNA primase DnaG DnaB-binding D521_1688 PF10410 DnaB-helicase binding domain of primase D521_1690 PF01165 Ribosomal protein S21 D521_1691 PF00814 Glycoprotease family D521_1692 PF02649 Type I GTP cyclohydrolase folE2 D521_1693 PF02780 Transketolase, C-terminal domain D521_1693 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D521_1693 PF02779 Transketolase, pyrimidine binding domain D521_1694 PF00348 Polyprenyl synthetase D521_1695 PF02609 Exonuclease VII small subunit D521_1697 PF00581 Rhodanese-like domain D521_1699 PF01738 Dienelactone hydrolase family D521_1700 PF01367 5'-3' exonuclease, C-terminal SAM fold D521_1700 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D521_1700 PF01612 3'-5' exonuclease D521_1700 PF00476 DNA polymerase family A D521_1702 PF01636 Phosphotransferase enzyme family D521_1704 PF00580 UvrD/REP helicase N-terminal domain D521_1704 PF13361 UvrD-like helicase C-terminal domain D521_1705 PF10458 Valyl tRNA synthetase tRNA binding arm D521_1705 PF00133 tRNA synthetases class I (I, L, M and V) D521_1705 PF08264 Anticodon-binding domain of tRNA D521_1706 PF00483 Nucleotidyl transferase D521_1708 PF01206 Sulfurtransferase TusA D521_1709 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D521_1709 PF02272 DHHA1 domain D521_1709 PF01411 tRNA synthetases class II (A) D521_1711 PF01970 Tripartite tricarboxylate transporter TctA family D521_1712 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D521_1712 PF00749 tRNA synthetases class I (E and Q), catalytic domain D521_1714 PF00175 Oxidoreductase NAD-binding domain D521_1714 PF00111 2Fe-2S iron-sulfur cluster binding domain D521_1714 PF00970 Oxidoreductase FAD-binding domain D521_1715 PF00202 Aminotransferase class-III D521_1716 PF02401 LytB protein D521_1717 PF04002 RadC-like JAB domain D521_1718 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D521_1719 PF00830 Ribosomal L28 family D521_1720 PF00471 Ribosomal protein L33 D521_1722 PF01189 16S rRNA methyltransferase RsmB/F D521_1722 PF01029 NusB family D521_1723 PF00551 Formyl transferase D521_1724 PF06574 FAD synthetase D521_1724 PF01687 Riboflavin kinase D521_1725 PF00133 tRNA synthetases class I (I, L, M and V) D521_1725 PF06827 Zinc finger found in FPG and IleRS D521_1725 PF08264 Anticodon-binding domain of tRNA D521_1726 PF01252 Signal peptidase (SPase) II D521_1727 PF02441 Flavoprotein D521_1727 PF04127 DNA / pantothenate metabolism flavoprotein D521_1728 PF00692 dUTPase D521_1730 PF07724 AAA domain (Cdc48 subfamily) D521_1730 PF00004 ATPase family associated with various cellular activities (AAA) D521_1730 PF17871 AAA lid domain D521_1730 PF02861 Clp amino terminal domain, pathogenicity island component D521_1730 PF10431 C-terminal, D2-small domain, of ClpB protein D521_1731 PF02617 ATP-dependent Clp protease adaptor protein ClpS D521_1732 PF00313 'Cold-shock' DNA-binding domain D521_1734 PF06865 Pyrimidine/purine nucleoside phosphorylase D521_1735 PF00764 Arginosuccinate synthase D521_1736 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D521_1736 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D521_1738 PF01649 Ribosomal protein S20 D521_1739 PF03023 Lipid II flippase MurJ D521_1740 PF13369 Transglutaminase-like superfamily D521_1741 PF09335 SNARE associated Golgi protein D521_1743 PF00586 AIR synthase related protein, N-terminal domain D521_1743 PF02769 AIR synthase related protein, C-terminal domain D521_1744 PF01594 AI-2E family transporter D521_1745 PF00308 Bacterial dnaA protein D521_1745 PF08299 Bacterial dnaA protein helix-turn-helix D521_1747 PF12627 Probable RNA and SrmB- binding site of polymerase A D521_1747 PF12626 Polymerase A arginine-rich C-terminus D521_1747 PF01743 Poly A polymerase head domain D521_1748 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D521_1749 PF02548 Ketopantoate hydroxymethyltransferase D521_1750 PF00226 DnaJ domain D521_1750 PF00684 DnaJ central domain D521_1750 PF01556 DnaJ C terminal domain D521_1751 PF00012 Hsp70 protein D521_1752 PF01025 GrpE D521_1753 PF00762 Ferrochelatase D521_1754 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding D521_1754 PF01628 HrcA protein C terminal domain D521_1756 PF02463 RecF/RecN/SMC N terminal domain D521_1757 PF08335 GlnD PII-uridylyltransferase D521_1757 PF03710 Glutamate-ammonia ligase adenylyltransferase D521_1759 PF00795 Carbon-nitrogen hydrolase D521_1760 PF01523 Putative modulator of DNA gyrase D521_1761 PF00793 DAHP synthetase I family D521_1762 PF01923 Cobalamin adenosyltransferase D521_1763 PF01565 FAD binding domain D521_1763 PF02913 FAD linked oxidases, C-terminal domain D521_1764 PF01565 FAD binding domain D521_1765 PF02754 Cysteine-rich domain D521_1765 PF13183 4Fe-4S dicluster domain D521_1766 PF01168 Alanine racemase, N-terminal domain D521_1767 PF03807 NADP oxidoreductase coenzyme F420-dependent D521_1767 PF14748 Pyrroline-5-carboxylate reductase dimerisation D521_1768 PF01040 UbiA prenyltransferase family D521_1769 PF17191 RecG wedge domain D521_1769 PF00271 Helicase conserved C-terminal domain D521_1769 PF00270 DEAD/DEAH box helicase D521_1770 PF02547 Queuosine biosynthesis protein D521_1772 PF02699 Preprotein translocase subunit D521_1773 PF02355 Protein export membrane protein D521_1773 PF13721 SecD export protein N-terminal TM region D521_1773 PF07549 SecD/SecF GG Motif D521_1774 PF07549 SecD/SecF GG Motif D521_1774 PF02355 Protein export membrane protein D521_1775 PF00534 Glycosyl transferases group 1 D521_1775 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D521_1776 PF08328 Adenylosuccinate lyase C-terminal D521_1776 PF00206 Lyase D521_1777 PF13417 Glutathione S-transferase, N-terminal domain D521_1777 PF00043 Glutathione S-transferase, C-terminal domain D521_1779 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D521_1779 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D521_1780 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D521_1781 PF02233 NAD(P) transhydrogenase beta subunit D521_1783 PF03401 Tripartite tricarboxylate transporter family receptor D521_1784 PF00118 TCP-1/cpn60 chaperonin family D521_1785 PF00166 Chaperonin 10 Kd subunit D521_1788 PF00107 Zinc-binding dehydrogenase D521_1788 PF08240 Alcohol dehydrogenase GroES-like domain D521_1789 PF02583 Metal-sensitive transcriptional repressor D521_1790 PF12697 Alpha/beta hydrolase family D521_1791 PF00005 ABC transporter D521_1792 PF00005 ABC transporter D521_1792 PF12399 Branched-chain amino acid ATP-binding cassette transporter D521_1796 PF00392 Bacterial regulatory proteins, gntR family D521_1796 PF07729 FCD domain D521_1798 PF00561 alpha/beta hydrolase fold D521_1799 PF02798 Glutathione S-transferase, N-terminal domain D521_1799 PF14497 Glutathione S-transferase, C-terminal domain D521_1800 PF00171 Aldehyde dehydrogenase family D521_1803 PF00072 Response regulator receiver domain D521_1803 PF00196 Bacterial regulatory proteins, luxR family D521_1804 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_1804 PF00072 Response regulator receiver domain D521_1804 PF01627 Hpt domain D521_1804 PF00989 PAS fold D521_1804 PF00497 Bacterial extracellular solute-binding proteins, family 3 D521_1804 PF00512 His Kinase A (phospho-acceptor) domain D521_1805 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D521_1806 PF01300 Telomere recombination D521_1806 PF03481 Putative GTP-binding controlling metal-binding D521_1807 PF02222 ATP-grasp domain D521_1807 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D521_1808 PF00731 AIR carboxylase D521_1809 PF01259 SAICAR synthetase D521_1810 PF01116 Fructose-bisphosphate aldolase class-II D521_1811 PF02887 Pyruvate kinase, alpha/beta domain D521_1811 PF00224 Pyruvate kinase, barrel domain D521_1812 PF00162 Phosphoglycerate kinase D521_1813 PF01063 Amino-transferase class IV D521_1815 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D521_1819 PF01967 MoaC family D521_1820 PF00589 Phage integrase family D521_1824 PF01967 MoaC family D521_1825 PF07963 Prokaryotic N-terminal methylation motif D521_1825 PF00114 Pilin (bacterial filament) D521_1826 PF03741 Integral membrane protein TerC family D521_1827 PF02629 CoA binding domain D521_1827 PF00549 CoA-ligase D521_1828 PF00549 CoA-ligase D521_1828 PF08442 ATP-grasp domain D521_1829 PF02631 RecX family D521_1832 PF00072 Response regulator receiver domain D521_1833 PF17151 Periplasmic sensor domain D521_1833 PF00990 Diguanylate cyclase, GGDEF domain D521_1837 PF03475 3-alpha domain D521_1837 PF03473 MOSC domain D521_1838 PF07690 Major Facilitator Superfamily D521_1838 PF07690 Major Facilitator Superfamily D521_1839 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D521_1841 PF03480 Bacterial extracellular solute-binding protein, family 7 D521_1843 PF03458 UPF0126 domain D521_1844 PF14497 Glutathione S-transferase, C-terminal domain D521_1844 PF02798 Glutathione S-transferase, N-terminal domain D521_1846 PF00132 Bacterial transferase hexapeptide (six repeats) D521_1847 PF00909 Ammonium Transporter Family D521_1850 PF00183 Hsp90 protein D521_1850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_1853 PF00919 Uncharacterized protein family UPF0004 D521_1853 PF04055 Radical SAM superfamily D521_1853 PF01938 TRAM domain D521_1854 PF02130 Uncharacterized protein family UPF0054 D521_1855 PF03471 Transporter associated domain D521_1855 PF00571 CBS domain D521_1856 PF00795 Carbon-nitrogen hydrolase D521_1857 PF02091 Glycyl-tRNA synthetase alpha subunit D521_1858 PF02092 Glycyl-tRNA synthetase beta subunit D521_1858 PF05746 DALR anticodon binding domain D521_1860 PF01553 Acyltransferase D521_1861 PF00398 Ribosomal RNA adenine dimethylase D521_1862 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D521_1863 PF09312 SurA N-terminal domain D521_1864 PF03968 OstA-like protein D521_1864 PF04453 LPS transport system D D521_1865 PF01636 Phosphotransferase enzyme family D521_1866 PF00483 Nucleotidyl transferase D521_1867 PF00557 Metallopeptidase family M24 D521_1867 PF05195 Aminopeptidase P, N-terminal domain D521_1868 PF01494 FAD binding domain D521_1869 PF01207 Dihydrouridine synthase (Dus) D521_1870 PF02954 Bacterial regulatory protein, Fis family D521_1871 PF01808 AICARFT/IMPCHase bienzyme D521_1871 PF02142 MGS-like domain D521_1872 PF02075 Crossover junction endodeoxyribonuclease RuvC D521_1873 PF01330 RuvA N terminal domain D521_1873 PF07499 RuvA, C-terminal domain D521_1874 PF05491 RuvB C-terminal winged helix domain D521_1874 PF05496 Holliday junction DNA helicase RuvB P-loop domain D521_1874 PF17864 RuvB AAA lid domain D521_1876 PF03702 Anhydro-N-acetylmuramic acid kinase D521_1877 PF01521 Iron-sulphur cluster biosynthesis D521_1878 PF02774 Semialdehyde dehydrogenase, dimerisation domain D521_1878 PF01118 Semialdehyde dehydrogenase, NAD binding domain D521_1879 PF00380 Ribosomal protein S9/S16 D521_1881 PF00572 Ribosomal protein L13 D521_1882 PF02566 OsmC-like protein D521_1884 PF13660 Domain of unknown function (DUF4147) D521_1884 PF05161 MOFRL family D521_1885 PF00664 ABC transporter transmembrane region D521_1885 PF00005 ABC transporter D521_1886 PF00293 NUDIX domain D521_1887 PF00152 tRNA synthetases class II (D, K and N) D521_1887 PF01336 OB-fold nucleic acid binding domain D521_1887 PF02938 GAD domain D521_1889 PF03109 ABC1 family D521_1892 PF01209 ubiE/COQ5 methyltransferase family D521_1895 PF00291 Pyridoxal-phosphate dependent enzyme D521_1895 PF00585 C-terminal regulatory domain of Threonine dehydratase D521_1897 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D521_1897 PF14489 QueF-like protein D521_1899 PF00436 Single-strand binding protein family D521_1900 PF07690 Major Facilitator Superfamily D521_1901 PF17760 UvrA interaction domain D521_1901 PF17755 UvrA DNA-binding domain D521_1902 PF00999 Sodium/hydrogen exchanger family D521_1902 PF02254 TrkA-N domain D521_1902 PF02080 TrkA-C domain D521_1903 PF00571 CBS domain D521_1903 PF01380 SIS domain D521_1907 PF12399 Branched-chain amino acid ATP-binding cassette transporter D521_1907 PF00005 ABC transporter D521_1908 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D521_1909 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D521_1910 PF02603 HPr Serine kinase N terminus D521_1910 PF07475 HPr Serine kinase C-terminal domain D521_1911 PF03668 P-loop ATPase protein family D521_1913 PF00730 HhH-GPD superfamily base excision DNA repair protein D521_1913 PF10576 Iron-sulfur binding domain of endonuclease III D521_1913 PF14815 NUDIX domain D521_1913 PF00633 Helix-hairpin-helix motif D521_1914 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D521_1914 PF06827 Zinc finger found in FPG and IleRS D521_1914 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D521_1916 PF00288 GHMP kinases N terminal domain D521_1916 PF08544 GHMP kinases C terminal D521_1917 PF14572 Phosphoribosyl synthetase-associated domain D521_1917 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D521_1918 PF01386 Ribosomal L25p family D521_1918 PF14693 Ribosomal protein TL5, C-terminal domain D521_1919 PF01195 Peptidyl-tRNA hydrolase D521_1920 PF00037 4Fe-4S binding domain D521_1921 PF01467 Cytidylyltransferase-like D521_1923 PF05193 Peptidase M16 inactive domain D521_1924 PF05193 Peptidase M16 inactive domain D521_1924 PF00675 Insulinase (Peptidase family M16) D521_1925 PF00448 SRP54-type protein, GTPase domain D521_1925 PF02881 SRP54-type protein, helical bundle domain D521_1926 PF00140 Sigma-70 factor, region 1.2 D521_1926 PF04542 Sigma-70 region 2 D521_1926 PF04545 Sigma-70, region 4 D521_1927 PF02630 SCO1/SenC D521_1928 PF01040 UbiA prenyltransferase family D521_1933 PF00510 Cytochrome c oxidase subunit III D521_1935 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D521_1937 PF00115 Cytochrome C and Quinol oxidase polypeptide I D521_1938 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D521_1938 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D521_1939 PF08241 Methyltransferase domain D521_1941 PF00588 SpoU rRNA Methylase family D521_1942 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D521_1942 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D521_1943 PF02556 Preprotein translocase subunit SecB D521_1944 PF00462 Glutaredoxin D521_1946 PF00300 Histidine phosphatase superfamily (branch 1) D521_1947 PF03572 Peptidase family S41 D521_1947 PF13180 PDZ domain D521_1948 PF00899 ThiF family D521_1949 PF02896 PEP-utilising enzyme, TIM barrel domain D521_1949 PF00391 PEP-utilising enzyme, mobile domain D521_1949 PF05524 PEP-utilising enzyme, N-terminal D521_1950 PF00381 PTS HPr component phosphorylation site D521_1952 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D521_1952 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D521_1954 PF00909 Ammonium Transporter Family D521_1955 PF00543 Nitrogen regulatory protein P-II D521_1957 PF04380 Membrane fusogenic activity D521_1959 PF04055 Radical SAM superfamily D521_1959 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D521_1960 PF03099 Biotin/lipoate A/B protein ligase family D521_1961 PF04359 Protein of unknown function (DUF493) D521_1965 PF03099 Biotin/lipoate A/B protein ligase family D521_1965 PF02237 Biotin protein ligase C terminal domain D521_1966 PF03309 Type III pantothenate kinase D521_1967 PF01467 Cytidylyltransferase-like D521_1968 PF00255 Glutathione peroxidase D521_1969 PF01593 Flavin containing amine oxidoreductase D521_1969 PF02027 RolB/RolC glucosidase family D521_1972 PF00106 short chain dehydrogenase D521_1973 PF13462 Thioredoxin D521_1975 PF00750 tRNA synthetases class I (R) D521_1975 PF05746 DALR anticodon binding domain D521_1975 PF03485 Arginyl tRNA synthetase N terminal domain D521_1977 PF02574 Homocysteine S-methyltransferase D521_1977 PF02965 Vitamin B12 dependent methionine synthase, activation domain D521_1977 PF00809 Pterin binding enzyme D521_1977 PF02607 B12 binding domain D521_1977 PF02310 B12 binding domain D521_1978 PF02310 B12 binding domain D521_1978 PF02607 B12 binding domain D521_1978 PF02965 Vitamin B12 dependent methionine synthase, activation domain D521_1978 PF00809 Pterin binding enzyme D521_1978 PF02574 Homocysteine S-methyltransferase D521_1982 PF00107 Zinc-binding dehydrogenase D521_1982 PF08240 Alcohol dehydrogenase GroES-like domain D521_1984 PF01613 Flavin reductase like domain D521_1985 PF13417 Glutathione S-transferase, N-terminal domain D521_1985 PF00043 Glutathione S-transferase, C-terminal domain D521_1986 PF00873 AcrB/AcrD/AcrF family D521_1987 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D521_1989 PF05726 Pirin C-terminal cupin domain D521_1989 PF02678 Pirin D521_1990 PF03358 NADPH-dependent FMN reductase D521_1993 PF01380 SIS domain D521_1994 PF14602 Hexapeptide repeat of succinyl-transferase D521_1994 PF00132 Bacterial transferase hexapeptide (six repeats) D521_1994 PF12804 MobA-like NTP transferase domain D521_1995 PF01171 PP-loop family D521_1997 PF00106 short chain dehydrogenase D521_1999 PF12627 Probable RNA and SrmB- binding site of polymerase A D521_1999 PF01966 HD domain D521_1999 PF01743 Poly A polymerase head domain D521_2001 PF01464 Transglycosylase SLT domain D521_2001 PF14718 Soluble lytic murein transglycosylase L domain D521_2002 PF01812 5-formyltetrahydrofolate cyclo-ligase family D521_2003 PF02219 Methylenetetrahydrofolate reductase D521_2004 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D521_2004 PF05221 S-adenosyl-L-homocysteine hydrolase D521_2005 PF00438 S-adenosylmethionine synthetase, N-terminal domain D521_2005 PF02772 S-adenosylmethionine synthetase, central domain D521_2005 PF02773 S-adenosylmethionine synthetase, C-terminal domain D521_2008 PF01678 Diaminopimelate epimerase D521_2009 PF00156 Phosphoribosyl transferase domain D521_2010 PF03372 Endonuclease/Exonuclease/phosphatase family D521_2011 PF07690 Major Facilitator Superfamily D521_2013 PF00561 alpha/beta hydrolase fold D521_2014 PF00440 Bacterial regulatory proteins, tetR family D521_2015 PF00696 Amino acid kinase family D521_2016 PF01258 Prokaryotic dksA/traR C4-type zinc finger D521_2017 PF07683 Cobalamin synthesis protein cobW C-terminal domain D521_2017 PF02492 CobW/HypB/UreG, nucleotide-binding domain D521_2018 PF00589 Phage integrase family D521_2018 PF02899 Phage integrase, N-terminal SAM-like domain D521_2020 PF02637 GatB domain D521_2020 PF02934 GatB/GatE catalytic domain D521_2021 PF01425 Amidase D521_2022 PF02686 Glu-tRNAGln amidotransferase C subunit D521_2026 PF03717 Penicillin-binding Protein dimerisation domain D521_2026 PF00905 Penicillin binding protein transpeptidase domain D521_2027 PF01098 Cell cycle protein D521_2028 PF00216 Bacterial DNA-binding protein D521_2032 PF00484 Carbonic anhydrase D521_2033 PF03279 Bacterial lipid A biosynthesis acyltransferase D521_2035 PF00069 Protein kinase domain D521_2035 PF03793 PASTA domain D521_2036 PF00849 RNA pseudouridylate synthase D521_2036 PF01479 S4 domain D521_2037 PF16658 Class II release factor RF3, C-terminal domain D521_2037 PF03144 Elongation factor Tu domain 2 D521_2037 PF00009 Elongation factor Tu GTP binding domain D521_2042 PF00300 Histidine phosphatase superfamily (branch 1) D521_2044 PF00497 Bacterial extracellular solute-binding proteins, family 3 D521_2046 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP D521_2053 PF13302 Acetyltransferase (GNAT) domain D521_2054 PF13419 Haloacid dehalogenase-like hydrolase D521_2059 PF00141 Peroxidase D521_2064 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_2064 PF00512 His Kinase A (phospho-acceptor) domain D521_2064 PF00989 PAS fold D521_2066 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D521_2075 PF00107 Zinc-binding dehydrogenase D521_2075 PF08240 Alcohol dehydrogenase GroES-like domain D521_2082 PF02899 Phage integrase, N-terminal SAM-like domain D521_2082 PF00589 Phage integrase family D521_2088 PF01555 DNA methylase D521_2094 PF02082 Transcriptional regulator D521_2103 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D521_2103 PF18381 YcaO cyclodehydratase C-terminal domain D521_2104 PF00072 Response regulator receiver domain D521_2104 PF02954 Bacterial regulatory protein, Fis family D521_2104 PF00158 Sigma-54 interaction domain D521_2105 PF00672 HAMP domain D521_2105 PF00512 His Kinase A (phospho-acceptor) domain D521_2105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D521_2105 PF00989 PAS fold D521_2107 PF01029 NusB family D521_2107 PF01189 16S rRNA methyltransferase RsmB/F D521_2108 PF01435 Peptidase family M48 D521_2109 PF02911 Formyl transferase, C-terminal domain D521_2109 PF00551 Formyl transferase D521_2110 PF01327 Polypeptide deformylase D521_2111 PF02481 DNA recombination-mediator protein A D521_2111 PF17782 DprA winged helix domain D521_2112 PF01751 Toprim domain D521_2112 PF01131 DNA topoisomerase D521_2113 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D521_2113 PF01266 FAD dependent oxidoreductase D521_2114 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain D521_2114 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain D521_2115 PF01926 50S ribosome-binding GTPase D521_2115 PF12631 MnmE helical domain D521_2115 PF10396 GTP-binding protein TrmE N-terminus D521_2116 PF14849 YidC periplasmic domain D521_2116 PF02096 60Kd inner membrane protein D521_2117 PF01809 Putative membrane protein insertion efficiency factor D521_2118 PF00825 Ribonuclease P D521_2119 PF00468 Ribosomal protein L34