locus-tag class description VE98_C0001G0002 PF00293 NUDIX domain VE98_C0001G0006 PF08275 DNA primase catalytic core, N-terminal domain VE98_C0001G0006 PF01807 CHC2 zinc finger VE98_C0001G0006 PF10410 DnaB-helicase binding domain of primase VE98_C0001G0007 PF04542 Sigma-70 region 2 VE98_C0001G0007 PF04545 Sigma-70, region 4 VE98_C0001G0007 PF03979 Sigma-70 factor, region 1.1 VE98_C0001G0007 PF00140 Sigma-70 factor, region 1.2 VE98_C0001G0007 PF04539 Sigma-70 region 3 VE98_C0001G0013 PF01555 DNA methylase VE98_C0001G0027 PF01207 Dihydrouridine synthase (Dus) VE98_C0001G0028 PF04070 Domain of unknown function (DUF378) VE98_C0001G0029 PF01479 S4 domain VE98_C0001G0029 PF00849 RNA pseudouridylate synthase VE98_C0001G0033 PF01171 PP-loop family VE98_C0001G0033 PF11734 TilS substrate C-terminal domain VE98_C0001G0034 PF01434 Peptidase family M41 VE98_C0001G0034 PF00004 ATPase family associated with various cellular activities (AAA) VE98_C0001G0034 PF17862 AAA+ lid domain VE98_C0001G0035 PF03023 Lipid II flippase MurJ VE98_C0001G0038 PF00679 Elongation factor G C-terminus VE98_C0001G0038 PF00009 Elongation factor Tu GTP binding domain VE98_C0001G0038 PF03144 Elongation factor Tu domain 2 VE98_C0001G0038 PF06421 GTP-binding protein LepA C-terminus VE98_C0001G0040 PF01628 HrcA protein C terminal domain VE98_C0001G0040 PF08220 DeoR-like helix-turn-helix domain VE98_C0001G0041 PF01025 GrpE VE98_C0001G0042 PF01784 NIF3 (NGG1p interacting factor 3) VE98_C0001G0044 PF00012 Hsp70 protein VE98_C0001G0059 PF01923 Cobalamin adenosyltransferase VE98_C0001G0060 PF02565 Recombination protein O C terminal VE98_C0001G0060 PF11967 Recombination protein O N terminal VE98_C0001G0061 PF02899 Phage integrase, N-terminal SAM-like domain VE98_C0001G0061 PF00589 Phage integrase family VE98_C0001G0062 PF08525 Opacity-associated protein A N-terminal motif VE98_C0001G0062 PF01476 LysM domain VE98_C0001G0062 PF01551 Peptidase family M23 VE98_C0001G0064 PF03816 Cell envelope-related transcriptional attenuator domain VE98_C0001G0066 PF13180 PDZ domain VE98_C0001G0068 PF05552 Conserved TM helix VE98_C0001G0071 PF00271 Helicase conserved C-terminal domain VE98_C0001G0071 PF00270 DEAD/DEAH box helicase VE98_C0001G0071 PF17191 RecG wedge domain VE98_C0001G0074 PF00579 tRNA synthetases class I (W and Y) VE98_C0001G0074 PF01479 S4 domain VE98_C0001G0075 PF00912 Transglycosylase VE98_C0001G0075 PF00905 Penicillin binding protein transpeptidase domain VE98_C0001G0077 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VE98_C0001G0077 PF05697 Bacterial trigger factor protein (TF) VE98_C0001G0077 PF05698 Bacterial trigger factor protein (TF) C-terminus VE98_C0001G0080 PF00574 Clp protease VE98_C0001G0081 PF09115 DNA polymerase III, delta subunit, C terminal VE98_C0001G0084 PF03946 Ribosomal protein L11, N-terminal domain VE98_C0001G0084 PF00298 Ribosomal protein L11, RNA binding domain VE98_C0001G0085 PF00687 Ribosomal protein L1p/L10e family VE98_C0001G0087 PF00692 dUTPase VE98_C0001G0088 PF02223 Thymidylate kinase VE98_C0001G0090 PF00466 Ribosomal protein L10 VE98_C0001G0091 PF00542 Ribosomal protein L7/L12 C-terminal domain VE98_C0001G0091 PF16320 Ribosomal protein L7/L12 dimerisation domain VE98_C0001G0092 PF01702 Queuine tRNA-ribosyltransferase VE98_C0001G0099 PF01050 Mannose-6-phosphate isomerase VE98_C0001G0099 PF00483 Nucleotidyl transferase VE98_C0001G0100 PF07549 SecD/SecF GG Motif VE98_C0001G0100 PF02355 Protein export membrane protein VE98_C0001G0101 PF02355 Protein export membrane protein VE98_C0001G0101 PF07549 SecD/SecF GG Motif VE98_C0001G0103 PF13393 Histidyl-tRNA synthetase VE98_C0001G0103 PF03129 Anticodon binding domain VE98_C0001G0105 PF01894 Uncharacterised protein family UPF0047 VE98_C0001G0108 PF01230 HIT domain VE98_C0001G0110 PF02934 GatB/GatE catalytic domain VE98_C0001G0110 PF02637 GatB domain VE98_C0001G0111 PF02130 Uncharacterized protein family UPF0054 VE98_C0001G0112 PF02491 SHS2 domain inserted in FTSA VE98_C0001G0113 PF00091 Tubulin/FtsZ family, GTPase domain VE98_C0001G0113 PF12327 FtsZ family, C-terminal domain VE98_C0001G0114 PF03477 ATP cone domain VE98_C0001G0115 PF02867 Ribonucleotide reductase, barrel domain VE98_C0001G0115 PF08471 Class II vitamin B12-dependent ribonucleotide reductase VE98_C0001G0118 PF02594 Uncharacterised ACR, YggU family COG1872 VE98_C0001G0120 PF00133 tRNA synthetases class I (I, L, M and V) VE98_C0001G0120 PF08264 Anticodon-binding domain of tRNA VE98_C0001G0122 PF00829 Ribosomal prokaryotic L21 protein VE98_C0001G0123 PF10502 Signal peptidase, peptidase S26 VE98_C0001G0124 PF00318 Ribosomal protein S2 VE98_C0001G0127 PF01255 Putative undecaprenyl diphosphate synthase VE98_C0001G0128 PF02163 Peptidase family M50 VE98_C0001G0128 PF17820 PDZ domain VE98_C0001G0129 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VE98_C0001G0129 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VE98_C0001G0130 PF03449 Transcription elongation factor, N-terminal VE98_C0001G0130 PF01272 Transcription elongation factor, GreA/GreB, C-term VE98_C0001G0131 PF00152 tRNA synthetases class II (D, K and N) VE98_C0001G0131 PF01336 OB-fold nucleic acid binding domain VE98_C0001G0134 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VE98_C0001G0134 PF02403 Seryl-tRNA synthetase N-terminal domain VE98_C0001G0137 PF07516 SecA Wing and Scaffold domain VE98_C0001G0137 PF01043 SecA preprotein cross-linking domain VE98_C0001G0137 PF07517 SecA DEAD-like domain VE98_C0001G0137 PF02810 SEC-C motif VE98_C0001G0138 PF00293 NUDIX domain VE98_C0001G0141 PF03462 PCRF domain VE98_C0001G0141 PF00472 RF-1 domain VE98_C0001G0142 PF00005 ABC transporter VE98_C0001G0143 PF18075 FtsX extracellular domain VE98_C0001G0143 PF02687 FtsX-like permease family VE98_C0001G0145 PF01471 Putative peptidoglycan binding domain VE98_C0001G0145 PF03572 Peptidase family S41 VE98_C0001G0145 PF17820 PDZ domain VE98_C0001G0146 PF03948 Ribosomal protein L9, C-terminal domain VE98_C0001G0146 PF01281 Ribosomal protein L9, N-terminal domain VE98_C0001G0147 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VE98_C0001G0147 PF03129 Anticodon binding domain VE98_C0001G0150 PF02381 MraZ protein, putative antitoxin-like VE98_C0001G0151 PF01795 MraW methylase family VE98_C0001G0154 PF01225 Mur ligase family, catalytic domain VE98_C0001G0154 PF02875 Mur ligase family, glutamate ligase domain VE98_C0001G0154 PF08245 Mur ligase middle domain VE98_C0001G0155 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VE98_C0001G0155 PF00953 Glycosyl transferase family 4 VE98_C0001G0160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VE98_C0001G0160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VE98_C0001G0162 PF01098 Cell cycle protein VE98_C0001G0163 PF03033 Glycosyltransferase family 28 N-terminal domain VE98_C0001G0163 PF04101 Glycosyltransferase family 28 C-terminal domain VE98_C0001G0165 PF02875 Mur ligase family, glutamate ligase domain VE98_C0001G0165 PF08245 Mur ligase middle domain VE98_C0001G0165 PF01225 Mur ligase family, catalytic domain VE98_C0001G0168 PF12169 DNA polymerase III subunits gamma and tau domain III VE98_C0001G0169 PF00772 DnaB-like helicase N terminal domain VE98_C0001G0169 PF03796 DnaB-like helicase C terminal domain VE98_C0001G0172 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VE98_C0001G0174 PF02132 RecR protein VE98_C0001G0174 PF13662 Toprim domain VE98_C0001G0176 PF01406 tRNA synthetases class I (C) catalytic domain VE98_C0001G0178 PF01022 Bacterial regulatory protein, arsR family VE98_C0001G0181 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VE98_C0001G0181 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VE98_C0001G0184 PF01699 Sodium/calcium exchanger protein VE98_C0001G0185 PF04542 Sigma-70 region 2 VE98_C0001G0185 PF00140 Sigma-70 factor, region 1.2 VE98_C0001G0185 PF03979 Sigma-70 factor, region 1.1 VE98_C0001G0185 PF04545 Sigma-70, region 4 VE98_C0001G0185 PF04539 Sigma-70 region 3 VE98_C0001G0193 PF00521 DNA gyrase/topoisomerase IV, subunit A VE98_C0001G0193 PF03989 DNA gyrase C-terminal domain, beta-propeller VE98_C0001G0195 PF00575 S1 RNA binding domain VE98_C0001G0196 PF11987 Translation-initiation factor 2 VE98_C0001G0196 PF08364 Bacterial translation initiation factor IF-2 associated region VE98_C0001G0196 PF00009 Elongation factor Tu GTP binding domain VE98_C0001G0196 PF04760 Translation initiation factor IF-2, N-terminal region VE98_C0001G0196 PF03144 Elongation factor Tu domain 2 VE98_C0001G0199 PF00035 Double-stranded RNA binding motif VE98_C0001G0199 PF14622 Ribonuclease-III-like VE98_C0001G0200 PF01029 NusB family VE98_C0001G0201 PF01783 Ribosomal L32p protein family VE98_C0001G0203 PF00886 Ribosomal protein S16 VE98_C0001G0206 PF01746 tRNA (Guanine-1)-methyltransferase VE98_C0001G0210 PF02151 UvrB/uvrC motif VE98_C0001G0210 PF04851 Type III restriction enzyme, res subunit VE98_C0001G0210 PF17757 UvrB interaction domain VE98_C0001G0210 PF12344 Ultra-violet resistance protein B VE98_C0001G0210 PF00271 Helicase conserved C-terminal domain VE98_C0001G0211 PF01594 AI-2E family transporter VE98_C0001G0213 PF02481 DNA recombination-mediator protein A VE98_C0001G0214 PF01131 DNA topoisomerase VE98_C0001G0214 PF01396 Topoisomerase DNA binding C4 zinc finger VE98_C0001G0214 PF01751 Toprim domain VE98_C0001G0216 PF17760 UvrA interaction domain VE98_C0001G0216 PF17755 UvrA DNA-binding domain VE98_C0001G0219 PF00140 Sigma-70 factor, region 1.2 VE98_C0001G0219 PF04542 Sigma-70 region 2 VE98_C0001G0219 PF04539 Sigma-70 region 3 VE98_C0001G0219 PF04545 Sigma-70, region 4 VE98_C0001G0219 PF03979 Sigma-70 factor, region 1.1 VE98_C0001G0223 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VE98_C0001G0224 PF03120 NAD-dependent DNA ligase OB-fold domain VE98_C0001G0224 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VE98_C0001G0224 PF00533 BRCA1 C Terminus (BRCT) domain VE98_C0001G0224 PF12826 Helix-hairpin-helix motif VE98_C0001G0224 PF01653 NAD-dependent DNA ligase adenylation domain VE98_C0001G0225 PF01219 Prokaryotic diacylglycerol kinase VE98_C0001G0227 PF01425 Amidase VE98_C0001G0239 PF00270 DEAD/DEAH box helicase VE98_C0001G0239 PF17757 UvrB interaction domain VE98_C0001G0239 PF03461 TRCF domain VE98_C0001G0239 PF00271 Helicase conserved C-terminal domain VE98_C0001G0239 PF02559 CarD-like/TRCF domain VE98_C0001G0241 PF01195 Peptidyl-tRNA hydrolase VE98_C0001G0244 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VE98_C0001G0244 PF01926 50S ribosome-binding GTPase VE98_C0001G0245 PF07943 Penicillin-binding protein 5, C-terminal domain VE98_C0001G0245 PF00768 D-alanyl-D-alanine carboxypeptidase VE98_C0001G0246 PF02938 GAD domain VE98_C0001G0246 PF00152 tRNA synthetases class II (D, K and N) VE98_C0001G0246 PF01336 OB-fold nucleic acid binding domain VE98_C0001G0249 PF01380 SIS domain VE98_C0001G0249 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain VE98_C0001G0250 PF01261 Xylose isomerase-like TIM barrel VE98_C0001G0251 PF01068 ATP dependent DNA ligase domain VE98_C0001G0251 PF04679 ATP dependent DNA ligase C terminal region VE98_C0001G0251 PF13298 DNA polymerase Ligase (LigD) VE98_C0001G0252 PF04542 Sigma-70 region 2 VE98_C0001G0252 PF04539 Sigma-70 region 3 VE98_C0001G0252 PF04545 Sigma-70, region 4 VE98_C0001G0252 PF00140 Sigma-70 factor, region 1.2 VE98_C0001G0252 PF03979 Sigma-70 factor, region 1.1 VE98_C0001G0256 PF10417 C-terminal domain of 1-Cys peroxiredoxin VE98_C0001G0256 PF00578 AhpC/TSA family VE98_C0001G0260 PF00202 Aminotransferase class-III VE98_C0001G0262 PF00534 Glycosyl transferases group 1 VE98_C0001G0262 PF13439 Glycosyltransferase Family 4 VE98_C0001G0263 PF00749 tRNA synthetases class I (E and Q), catalytic domain VE98_C0001G0264 PF03808 Glycosyl transferase WecB/TagA/CpsF family VE98_C0001G0265 PF13439 Glycosyltransferase Family 4 VE98_C0001G0265 PF00534 Glycosyl transferases group 1 VE98_C0001G0271 PF00464 Serine hydroxymethyltransferase VE98_C0001G0275 PF01016 Ribosomal L27 protein VE98_C0001G0276 PF06418 CTP synthase N-terminus VE98_C0001G0276 PF00117 Glutamine amidotransferase class-I VE98_C0001G0277 PF00842 Alanine racemase, C-terminal domain VE98_C0001G0277 PF01168 Alanine racemase, N-terminal domain VE98_C0001G0278 PF00986 DNA gyrase B subunit, carboxyl terminus VE98_C0001G0278 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VE98_C0001G0278 PF01751 Toprim domain VE98_C0001G0278 PF00204 DNA gyrase B VE98_C0001G0279 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VE98_C0001G0279 PF01588 Putative tRNA binding domain VE98_C0001G0279 PF03484 tRNA synthetase B5 domain VE98_C0001G0279 PF03147 Ferredoxin-fold anticodon binding domain VE98_C0001G0279 PF03483 B3/4 domain VE98_C0001G0280 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VE98_C0001G0280 PF01409 tRNA synthetases class II core domain (F) VE98_C0001G0282 PF14480 DNA polymerase III polC-type N-terminus I VE98_C0001G0282 PF11490 DNA polymerase III polC-type N-terminus II VE98_C0001G0282 PF07733 Bacterial DNA polymerase III alpha NTPase domain VE98_C0001G0282 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VE98_C0001G0282 PF02811 PHP domain VE98_C0001G0282 PF00929 Exonuclease VE98_C0001G0282 PF14579 Helix-hairpin-helix motif VE98_C0001G0287 PF07883 Cupin domain VE98_C0001G0290 PF02687 FtsX-like permease family VE98_C0001G0290 PF12704 MacB-like periplasmic core domain VE98_C0001G0291 PF00005 ABC transporter VE98_C0001G0293 PF00471 Ribosomal protein L33 VE98_C0001G0294 PF00467 KOW motif VE98_C0001G0294 PF02357 Transcription termination factor nusG VE98_C0001G0297 PF00572 Ribosomal protein L13 VE98_C0001G0298 PF01196 Ribosomal protein L17 VE98_C0001G0299 PF01000 RNA polymerase Rpb3/RpoA insert domain VE98_C0001G0299 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VE98_C0001G0299 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VE98_C0001G0300 PF01479 S4 domain VE98_C0001G0300 PF00163 Ribosomal protein S4/S9 N-terminal domain VE98_C0001G0301 PF00411 Ribosomal protein S11 VE98_C0001G0302 PF00416 Ribosomal protein S13/S18 VE98_C0001G0303 PF00444 Ribosomal protein L36 VE98_C0001G0304 PF01176 Translation initiation factor 1A / IF-1 VE98_C0001G0305 PF00557 Metallopeptidase family M24 VE98_C0001G0307 PF00344 SecY translocase VE98_C0001G0308 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VE98_C0001G0309 PF00333 Ribosomal protein S5, N-terminal domain VE98_C0001G0309 PF03719 Ribosomal protein S5, C-terminal domain VE98_C0001G0310 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VE98_C0001G0311 PF00347 Ribosomal protein L6 VE98_C0001G0312 PF00410 Ribosomal protein S8 VE98_C0001G0314 PF00281 Ribosomal protein L5 VE98_C0001G0314 PF00673 ribosomal L5P family C-terminus VE98_C0001G0315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VE98_C0001G0315 PF00467 KOW motif VE98_C0001G0316 PF00238 Ribosomal protein L14p/L23e VE98_C0001G0317 PF00366 Ribosomal protein S17 VE98_C0001G0319 PF00252 Ribosomal protein L16p/L10e VE98_C0001G0320 PF00189 Ribosomal protein S3, C-terminal domain VE98_C0001G0320 PF07650 KH domain VE98_C0001G0321 PF00237 Ribosomal protein L22p/L17e VE98_C0001G0322 PF00203 Ribosomal protein S19 VE98_C0001G0323 PF00181 Ribosomal Proteins L2, RNA binding domain VE98_C0001G0323 PF03947 Ribosomal Proteins L2, C-terminal domain VE98_C0001G0324 PF00276 Ribosomal protein L23 VE98_C0001G0325 PF00573 Ribosomal protein L4/L1 family VE98_C0001G0326 PF00297 Ribosomal protein L3 VE98_C0001G0327 PF00338 Ribosomal protein S10p/S20e VE98_C0001G0328 PF03143 Elongation factor Tu C-terminal domain VE98_C0001G0328 PF03144 Elongation factor Tu domain 2 VE98_C0001G0328 PF00009 Elongation factor Tu GTP binding domain VE98_C0001G0331 PF00679 Elongation factor G C-terminus VE98_C0001G0331 PF03764 Elongation factor G, domain IV VE98_C0001G0331 PF00009 Elongation factor Tu GTP binding domain VE98_C0001G0331 PF03144 Elongation factor Tu domain 2 VE98_C0001G0331 PF14492 Elongation Factor G, domain II VE98_C0001G0332 PF00177 Ribosomal protein S7p/S5e VE98_C0001G0333 PF00164 Ribosomal protein S12/S23 VE98_C0001G0334 PF00623 RNA polymerase Rpb1, domain 2 VE98_C0001G0334 PF04998 RNA polymerase Rpb1, domain 5 VE98_C0001G0334 PF05000 RNA polymerase Rpb1, domain 4 VE98_C0001G0334 PF04983 RNA polymerase Rpb1, domain 3 VE98_C0001G0334 PF04997 RNA polymerase Rpb1, domain 1 VE98_C0001G0335 PF04560 RNA polymerase Rpb2, domain 7 VE98_C0001G0335 PF00562 RNA polymerase Rpb2, domain 6 VE98_C0001G0335 PF10385 RNA polymerase beta subunit external 1 domain VE98_C0001G0335 PF04565 RNA polymerase Rpb2, domain 3 VE98_C0001G0335 PF04561 RNA polymerase Rpb2, domain 2 VE98_C0001G0335 PF04563 RNA polymerase beta subunit VE98_C0001G0337 PF01435 Peptidase family M48 VE98_C0001G0338 PF04011 LemA family VE98_C0001G0340 PF01551 Peptidase family M23 VE98_C0001G0340 PF01476 LysM domain VE98_C0001G0341 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VE98_C0001G0344 PF00781 Diacylglycerol kinase catalytic domain VE98_C0001G0345 PF05198 Translation initiation factor IF-3, N-terminal domain VE98_C0001G0345 PF00707 Translation initiation factor IF-3, C-terminal domain VE98_C0001G0346 PF01632 Ribosomal protein L35 VE98_C0001G0347 PF00453 Ribosomal protein L20 VE98_C0001G0351 PF00534 Glycosyl transferases group 1 VE98_C0001G0351 PF13439 Glycosyltransferase Family 4 VE98_C0001G0352 PF00534 Glycosyl transferases group 1 VE98_C0001G0352 PF13439 Glycosyltransferase Family 4 VE98_C0001G0353 PF02397 Bacterial sugar transferase VE98_C0001G0354 PF00485 Phosphoribulokinase / Uridine kinase family VE98_C0001G0365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VE98_C0001G0365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VE98_C0001G0365 PF03129 Anticodon binding domain VE98_C0001G0365 PF02824 TGS domain VE98_C0001G0368 PF02709 N-terminal domain of galactosyltransferase VE98_C0001G0368 PF00535 Glycosyl transferase family 2 VE98_C0001G0372 PF04073 Aminoacyl-tRNA editing domain VE98_C0001G0372 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VE98_C0001G0372 PF03129 Anticodon binding domain VE98_C0001G0375 PF00750 tRNA synthetases class I (R) VE98_C0001G0375 PF03485 Arginyl tRNA synthetase N terminal domain VE98_C0001G0375 PF05746 DALR anticodon binding domain VE98_C0001G0376 PF07687 Peptidase dimerisation domain VE98_C0001G0376 PF01546 Peptidase family M20/M25/M40 VE98_C0001G0382 PF01752 Collagenase VE98_C0001G0382 PF08453 Peptidase family M9 N-terminal VE98_C0001G0382 PF18496 Collagenase G catalytic helper subdomain VE98_C0001G0385 PF09587 Bacterial capsule synthesis protein PGA_cap VE98_C0001G0386 PF13335 Magnesium chelatase, subunit ChlI C-terminal VE98_C0001G0386 PF01078 Magnesium chelatase, subunit ChlI VE98_C0001G0394 PF01327 Polypeptide deformylase VE98_C0001G0395 PF02911 Formyl transferase, C-terminal domain VE98_C0001G0395 PF00551 Formyl transferase VE98_C0001G0401 PF10397 Adenylosuccinate lyase C-terminus VE98_C0001G0401 PF00206 Lyase VE98_C0001G0402 PF09269 Domain of unknown function (DUF1967) VE98_C0001G0402 PF01018 GTP1/OBG VE98_C0001G0402 PF01926 50S ribosome-binding GTPase VE98_C0001G0407 PF01197 Ribosomal protein L31 VE98_C0001G0408 PF03462 PCRF domain VE98_C0001G0408 PF00472 RF-1 domain VE98_C0001G0409 PF05175 Methyltransferase small domain VE98_C0001G0409 PF17827 PrmC N-terminal domain VE98_C0001G0410 PF00625 Guanylate kinase VE98_C0001G0411 PF00849 RNA pseudouridylate synthase VE98_C0001G0417 PF01790 Prolipoprotein diacylglyceryl transferase VE98_C0001G0419 PF01668 SmpB protein VE98_C0001G0426 PF13456 Reverse transcriptase-like VE98_C0001G0428 PF02163 Peptidase family M50 VE98_C0001G0429 PF00830 Ribosomal L28 family VE98_C0001G0435 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) VE98_C0001G0439 PF08666 SAF domain VE98_C0001G0439 PF03102 NeuB family VE98_C0001G0453 PF08281 Sigma-70, region 4 VE98_C0001G0453 PF04542 Sigma-70 region 2 VE98_C0001G0457 PF00334 Nucleoside diphosphate kinase VE98_C0001G0458 PF05193 Peptidase M16 inactive domain VE98_C0001G0458 PF00675 Insulinase (Peptidase family M16) VE98_C0001G0459 PF12072 Domain of unknown function (DUF3552) VE98_C0001G0459 PF01966 HD domain VE98_C0001G0459 PF00013 KH domain VE98_C0001G0462 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VE98_C0001G0463 PF00814 Glycoprotease family VE98_C0001G0469 PF05496 Holliday junction DNA helicase RuvB P-loop domain VE98_C0001G0469 PF05491 RuvB C-terminal winged helix domain VE98_C0001G0469 PF17864 RuvB AAA lid domain VE98_C0001G0471 PF02673 Bacitracin resistance protein BacA VE98_C0001G0472 PF00082 Subtilase family VE98_C0001G0475 PF13735 tRNA nucleotidyltransferase domain 2 putative VE98_C0001G0475 PF12627 Probable RNA and SrmB- binding site of polymerase A VE98_C0001G0475 PF01743 Poly A polymerase head domain VE98_C0001G0476 PF01026 TatD related DNase VE98_C0001G0478 PF01588 Putative tRNA binding domain VE98_C0001G0478 PF09334 tRNA synthetases class I (M) VE98_C0001G0478 PF08264 Anticodon-binding domain of tRNA VE98_C0001G0480 PF00462 Glutaredoxin VE98_C0001G0481 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VE98_C0001G0481 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain VE98_C0001G0482 PF00085 Thioredoxin VE98_C0001G0482 PF07992 Pyridine nucleotide-disulphide oxidoreductase VE98_C0001G0486 PF00216 Bacterial DNA-binding protein VE98_C0001G0487 PF03652 Holliday junction resolvase VE98_C0001G0489 PF02491 SHS2 domain inserted in FTSA VE98_C0001G0490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VE98_C0001G0490 PF01411 tRNA synthetases class II (A) VE98_C0001G0494 PF00266 Aminotransferase class-V VE98_C0001G0496 PF01386 Ribosomal L25p family VE98_C0001G0496 PF14693 Ribosomal protein TL5, C-terminal domain VE98_C0001G0498 PF00953 Glycosyl transferase family 4 VE98_C0001G0501 PF00753 Metallo-beta-lactamase superfamily VE98_C0001G0501 PF16123 Hydroxyacylglutathione hydrolase C-terminus VE98_C0001G0502 PF00753 Metallo-beta-lactamase superfamily VE98_C0001G0502 PF03772 Competence protein VE98_C0001G0502 PF13567 Domain of unknown function (DUF4131) VE98_C0001G0503 PF02618 YceG-like family VE98_C0001G0505 PF01330 RuvA N terminal domain VE98_C0001G0505 PF07499 RuvA, C-terminal domain VE98_C0001G0506 PF02075 Crossover junction endodeoxyribonuclease RuvC VE98_C0001G0507 PF01709 Transcriptional regulator VE98_C0001G0508 PF00580 UvrD/REP helicase N-terminal domain VE98_C0001G0508 PF13361 UvrD-like helicase C-terminal domain VE98_C0001G0510 PF00398 Ribosomal RNA adenine dimethylase VE98_C0001G0511 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VE98_C0001G0516 PF00154 recA bacterial DNA recombination protein VE98_C0001G0517 PF04461 Protein of unknown function (DUF520) VE98_C0001G0519 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VE98_C0001G0519 PF17854 FtsK alpha domain VE98_C0001G0519 PF09397 Ftsk gamma domain VE98_C0001G0519 PF01580 FtsK/SpoIIIE family VE98_C0001G0523 PF17770 Ribonuclease J C-terminal domain VE98_C0001G0523 PF00753 Metallo-beta-lactamase superfamily VE98_C0001G0523 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VE98_C0001G0524 PF03167 Uracil DNA glycosylase superfamily VE98_C0001G0525 PF01138 3' exoribonuclease family, domain 1 VE98_C0001G0525 PF03725 3' exoribonuclease family, domain 2 VE98_C0001G0525 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VE98_C0001G0525 PF00575 S1 RNA binding domain VE98_C0001G0525 PF00013 KH domain VE98_C0001G0526 PF00312 Ribosomal protein S15 VE98_C0001G0528 PF01649 Ribosomal protein S20 VE98_C0001G0530 PF04294 VanW like protein VE98_C0001G0532 PF03030 Inorganic H+ pyrophosphatase VE98_C0001G0533 PF00534 Glycosyl transferases group 1 VE98_C0001G0533 PF13439 Glycosyltransferase Family 4 VE98_C0001G0536 PF13439 Glycosyltransferase Family 4 VE98_C0001G0536 PF00534 Glycosyl transferases group 1 VE98_C0001G0540 PF14849 YidC periplasmic domain VE98_C0001G0540 PF02096 60Kd inner membrane protein VE98_C0001G0541 PF00825 Ribonuclease P VE98_C0001G0542 PF00468 Ribosomal protein L34 VE98_C0001G0543 PF00308 Bacterial dnaA protein VE98_C0001G0543 PF08299 Bacterial dnaA protein helix-turn-helix VE98_C0001G0543 PF11638 DnaA N-terminal domain VE98_C0001G0544 PF00712 DNA polymerase III beta subunit, N-terminal domain VE98_C0001G0544 PF02767 DNA polymerase III beta subunit, central domain VE98_C0001G0544 PF02768 DNA polymerase III beta subunit, C-terminal domain VE98_C0001G0546 PF06827 Zinc finger found in FPG and IleRS VE98_C0001G0546 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VE98_C0001G0546 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VE98_C0001G0548 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VE98_C0001G0548 PF01367 5'-3' exonuclease, C-terminal SAM fold VE98_C0001G0548 PF00476 DNA polymerase family A VE98_C0001G0550 PF08245 Mur ligase middle domain VE98_C0001G0550 PF02875 Mur ligase family, glutamate ligase domain VE98_C0001G0550 PF01225 Mur ligase family, catalytic domain VE98_C0001G0552 PF00814 Glycoprotease family VE98_C0001G0553 PF10458 Valyl tRNA synthetase tRNA binding arm VE98_C0001G0553 PF00133 tRNA synthetases class I (I, L, M and V) VE98_C0001G0553 PF08264 Anticodon-binding domain of tRNA VE98_C0001G0555 PF00437 Type II/IV secretion system protein VE98_C0001G0564 PF14437 MafB19-like deaminase VE98_C0001G0568 PF00483 Nucleotidyl transferase VE98_C0001G0570 PF08486 Stage II sporulation protein VE98_C0001G0571 PF00156 Phosphoribosyl transferase domain VE98_C0001G0572 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VE98_C0001G0572 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VE98_C0001G0572 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VE98_C0001G0572 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VE98_C0001G0573 PF00579 tRNA synthetases class I (W and Y) VE98_C0001G0577 PF09334 tRNA synthetases class I (M) VE98_C0001G0577 PF13603 Leucyl-tRNA synthetase, Domain 2 VE98_C0001G0577 PF00133 tRNA synthetases class I (I, L, M and V) VE98_C0001G0577 PF08264 Anticodon-binding domain of tRNA VE98_C0001G0579 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VE98_C0001G0579 PF14579 Helix-hairpin-helix motif VE98_C0001G0579 PF07733 Bacterial DNA polymerase III alpha NTPase domain VE98_C0001G0579 PF01336 OB-fold nucleic acid binding domain VE98_C0001G0579 PF02811 PHP domain VE98_C0001G0581 PF01245 Ribosomal protein L19 VE98_C0001G0582 PF01351 Ribonuclease HII VE98_C0001G0583 PF02021 Uncharacterised protein family UPF0102 VE98_C0001G0584 PF08529 NusA N-terminal domain VE98_C0001G0584 PF13184 NusA-like KH domain VE98_C0001G0584 PF00575 S1 RNA binding domain VE98_C0001G0585 PF02861 Clp amino terminal domain, pathogenicity island component VE98_C0001G0585 PF07724 AAA domain (Cdc48 subfamily) VE98_C0001G0585 PF00004 ATPase family associated with various cellular activities (AAA) VE98_C0001G0585 PF17871 AAA lid domain VE98_C0001G0585 PF10431 C-terminal, D2-small domain, of ClpB protein VE98_C0001G0591 PF06071 Protein of unknown function (DUF933) VE98_C0001G0591 PF01926 50S ribosome-binding GTPase VE98_C0001G0592 PF09285 Elongation factor P, C-terminal VE98_C0001G0592 PF01132 Elongation factor P (EF-P) OB domain VE98_C0001G0592 PF08207 Elongation factor P (EF-P) KOW-like domain VE98_C0001G0593 PF01084 Ribosomal protein S18 VE98_C0001G0594 PF00436 Single-strand binding protein family VE98_C0001G0595 PF01250 Ribosomal protein S6