VE98_C0001G0001 PF13412 Winged helix-turn-helix DNA-binding VE98_C0001G0001 PF13581 Histidine kinase-like ATPase domain VE98_C0001G0001 PF14213 VE98_C0001G0001 VE98_C0001G0002 PF00293 NUDIX domain VE98_C0001G0003 PF03819 MazG nucleotide pyrophosphohydrolase domain VE98_C0001G0005 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) VE98_C0001G0006 PF01807 CHC2 zinc finger VE98_C0001G0006 PF08275 DNA primase catalytic core, N-terminal domain VE98_C0001G0006 PF10410 DnaB-helicase binding domain of primase VE98_C0001G0006 PF13155 Toprim-like VE98_C0001G0007 PF00140 Sigma-70 factor, region 1 VE98_C0001G0007 PF03979 Sigma-70 factor, region 1 VE98_C0001G0007 PF04539 Sigma-70 region 3 VE98_C0001G0007 PF04542 Sigma-70 region 2 VE98_C0001G0007 PF04545 Sigma-70, region 4 VE98_C0001G0008 PF01464 Transglycosylase SLT domain VE98_C0001G0009 PF01541 GIY-YIG catalytic domain VE98_C0001G0010 PF01972 Serine dehydrogenase proteinase VE98_C0001G0012 PF00239 Resolvase, N terminal domain VE98_C0001G0012 PF07508 Recombinase VE98_C0001G0012 PF13408 Recombinase zinc beta ribbon domain VE98_C0001G0013 PF01555 DNA methylase VE98_C0001G0014 PF15515 MvaI/BcnI restriction endonuclease family VE98_C0001G0016 PF00239 Resolvase, N terminal domain VE98_C0001G0016 PF07508 Recombinase VE98_C0001G0016 PF13408 Recombinase zinc beta ribbon domain VE98_C0001G0017 PF02384 N-6 DNA Methylase VE98_C0001G0018 PF12728 Helix-turn-helix domain VE98_C0001G0022 PF13274 VE98_C0001G0022 VE98_C0001G0026 PF13376 VE98_C0001G0026 VE98_C0001G0027 PF01207 Dihydrouridine synthase (Dus) VE98_C0001G0028 PF04070 VE98_C0001G0028 VE98_C0001G0029 PF00849 RNA pseudouridylate synthase VE98_C0001G0029 PF01479 S4 domain VE98_C0001G0030 PF02578 Multi-copper polyphenol oxidoreductase laccase VE98_C0001G0031 PF04977 Septum formation initiator VE98_C0001G0033 PF01171 PP-loop family VE98_C0001G0034 PF00004 ATPase family associated with various cellular activities (AAA) VE98_C0001G0034 PF01434 Peptidase family M41 VE98_C0001G0035 PF03023 VE98_C0001G0035 VE98_C0001G0038 PF00009 Elongation factor Tu GTP binding domain VE98_C0001G0038 PF00679 Elongation factor G C-terminus VE98_C0001G0038 PF06421 GTP-binding protein LepA C-terminus VE98_C0001G0040 PF01628 HrcA protein C terminal domain VE98_C0001G0041 PF01025 GrpE VE98_C0001G0044 PF00012 Hsp70 protein VE98_C0001G0046 PF00226 DnaJ domain VE98_C0001G0046 PF00684 DnaJ central domain VE98_C0001G0046 PF01556 DnaJ C terminal domain VE98_C0001G0050 PF00293 NUDIX domain VE98_C0001G0056 PF06821 Serine hydrolase VE98_C0001G0059 PF01923 Cobalamin adenosyltransferase VE98_C0001G0060 PF02565 Recombination protein O C terminal VE98_C0001G0060 PF11967 Recombination protein O N terminal VE98_C0001G0061 PF00589 Phage integrase family VE98_C0001G0061 PF02899 Phage integrase, N-terminal SAM-like domain VE98_C0001G0062 PF01476 LysM domain VE98_C0001G0062 PF01551 Peptidase family M23 VE98_C0001G0064 PF03816 Cell envelope-related transcriptional attenuator domain VE98_C0001G0064 PF13399 LytR cell envelope-related transcriptional attenuator VE98_C0001G0066 PF13180 PDZ domain VE98_C0001G0066 PF13365 Trypsin-like peptidase domain VE98_C0001G0068 PF05552 Conserved TM helix VE98_C0001G0069 PF10531 SLBB domain VE98_C0001G0069 PF12836 Helix-hairpin-helix motif VE98_C0001G0070 PF03602 Conserved hypothetical protein 95 VE98_C0001G0071 PF00270 DEAD/DEAH box helicase VE98_C0001G0071 PF00271 Helicase conserved C-terminal domain VE98_C0001G0071 PF17191 VE98_C0001G0071 VE98_C0001G0074 PF00579 tRNA synthetases class I (W and Y) VE98_C0001G0074 PF01479 S4 domain VE98_C0001G0075 PF00905 Penicillin binding protein transpeptidase domain VE98_C0001G0075 PF00912 Transglycosylase VE98_C0001G0077 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VE98_C0001G0077 PF05697 Bacterial trigger factor protein (TF) VE98_C0001G0077 PF05698 Bacterial trigger factor protein (TF) C-terminus VE98_C0001G0079 PF01875 Memo-like protein VE98_C0001G0080 PF00574 Clp protease VE98_C0001G0081 PF13177 DNA polymerase III, delta subunit VE98_C0001G0082 PF00515 Tetratricopeptide repeat VE98_C0001G0082 PF13432 Tetratricopeptide repeat VE98_C0001G0083 PF01541 GIY-YIG catalytic domain VE98_C0001G0084 PF00298 Ribosomal protein L11, RNA binding domain VE98_C0001G0084 PF03946 Ribosomal protein L11, N-terminal domain VE98_C0001G0085 PF00687 Ribosomal protein L1p/L10e family VE98_C0001G0087 PF00692 dUTPase VE98_C0001G0088 PF02223 Thymidylate kinase VE98_C0001G0089 PF02511 Thymidylate synthase complementing protein VE98_C0001G0090 PF00466 Ribosomal protein L10 VE98_C0001G0091 PF00542 Ribosomal protein L7/L12 C-terminal domain VE98_C0001G0091 PF16320 VE98_C0001G0091 VE98_C0001G0092 PF01702 Queuine tRNA-ribosyltransferase VE98_C0001G0096 PF13176 Tetratricopeptide repeat VE98_C0001G0096 PF13191 AAA ATPase domain VE98_C0001G0098 PF02368 Bacterial Ig-like domain (group 2) VE98_C0001G0099 PF00483 Nucleotidyl transferase VE98_C0001G0099 PF01050 Mannose-6-phosphate isomerase VE98_C0001G0100 PF02355 Protein export membrane protein VE98_C0001G0101 PF02355 Protein export membrane protein VE98_C0001G0101 PF07549 SecD/SecF GG Motif VE98_C0001G0102 PF12705 PD-(D/E)XK nuclease superfamily VE98_C0001G0103 PF03129 Anticodon binding domain VE98_C0001G0103 PF13393 Histidyl-tRNA synthetase VE98_C0001G0105 PF01894 Uncharacterised protein family UPF0047 VE98_C0001G0108 PF01230 HIT domain VE98_C0001G0109 PF01165 Ribosomal protein S21 VE98_C0001G0110 PF09424 Yqey-like protein VE98_C0001G0111 PF02130 Uncharacterized protein family UPF0054 VE98_C0001G0112 PF02491 SHS2 domain inserted in FTSA VE98_C0001G0112 PF14450 Cell division protein FtsA VE98_C0001G0113 PF00091 Tubulin/FtsZ family, GTPase domain VE98_C0001G0113 PF12327 FtsZ family, C-terminal domain VE98_C0001G0114 PF03477 ATP cone domain VE98_C0001G0115 PF02867 Ribonucleotide reductase, barrel domain VE98_C0001G0115 PF08471 VE98_C0001G0115 VE98_C0001G0118 PF02594 Uncharacterised ACR, YggU family COG1872 VE98_C0001G0119 PF01936 NYN domain VE98_C0001G0120 PF00133 tRNA synthetases class I (I, L, M and V) VE98_C0001G0120 PF08264 Anticodon-binding domain of tRNA VE98_C0001G0121 PF02643 Uncharacterized ACR, COG1430 VE98_C0001G0122 PF00829 Ribosomal prokaryotic L21 protein VE98_C0001G0123 PF00717 Peptidase S24-like VE98_C0001G0124 PF00318 Ribosomal protein S2 VE98_C0001G0125 PF00889 Elongation factor TS VE98_C0001G0126 PF01765 Ribosome recycling factor VE98_C0001G0127 PF01255 Putative undecaprenyl diphosphate synthase VE98_C0001G0128 PF02163 Peptidase family M50 VE98_C0001G0128 PF13180 PDZ domain VE98_C0001G0129 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VE98_C0001G0129 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VE98_C0001G0130 PF01272 Transcription elongation factor, GreA/GreB, C-term VE98_C0001G0130 PF03449 Transcription elongation factor, N-terminal VE98_C0001G0131 PF00152 tRNA synthetases class II (D, K and N) VE98_C0001G0131 PF01336 OB-fold nucleic acid binding domain VE98_C0001G0132 PF00072 Response regulator receiver domain VE98_C0001G0134 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VE98_C0001G0134 PF02403 Seryl-tRNA synthetase N-terminal domain VE98_C0001G0136 PF12728 Helix-turn-helix domain VE98_C0001G0137 PF01043 SecA preprotein cross-linking domain VE98_C0001G0137 PF02810 SEC-C motif VE98_C0001G0137 PF07516 SecA Wing and Scaffold domain VE98_C0001G0137 PF07517 SecA DEAD-like domain VE98_C0001G0138 PF00293 NUDIX domain VE98_C0001G0140 PF01345 VE98_C0001G0140 VE98_C0001G0141 PF00472 RF-1 domain VE98_C0001G0141 PF03462 PCRF domain VE98_C0001G0142 PF00005 ABC transporter VE98_C0001G0143 PF02687 VE98_C0001G0143 VE98_C0001G0144 PF01551 Peptidase family M23 VE98_C0001G0145 PF03572 Peptidase family S41 VE98_C0001G0145 PF13180 PDZ domain VE98_C0001G0146 PF01281 Ribosomal protein L9, N-terminal domain VE98_C0001G0146 PF03948 Ribosomal protein L9, C-terminal domain VE98_C0001G0147 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VE98_C0001G0147 PF03129 Anticodon binding domain VE98_C0001G0149 PF12961 Domain of Unknown Function with PDB structure (DUF3850) VE98_C0001G0150 PF02381 MraZ protein VE98_C0001G0151 PF01795 MraW methylase family VE98_C0001G0153 PF00905 Penicillin binding protein transpeptidase domain VE98_C0001G0153 PF03717 Penicillin-binding Protein dimerisation domain VE98_C0001G0154 PF02875 Mur ligase family, glutamate ligase domain VE98_C0001G0154 PF08245 Mur ligase middle domain VE98_C0001G0155 PF00953 Glycosyl transferase family 4 VE98_C0001G0157 PF01844 HNH endonuclease VE98_C0001G0158 PF10648 VE98_C0001G0158 VE98_C0001G0159 PF10646 VE98_C0001G0159 VE98_C0001G0160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VE98_C0001G0161 PF08245 Mur ligase middle domain VE98_C0001G0162 PF01098 VE98_C0001G0162 VE98_C0001G0163 PF03033 Glycosyltransferase family 28 N-terminal domain VE98_C0001G0163 PF04101 Glycosyltransferase family 28 C-terminal domain VE98_C0001G0164 PF04203 Sortase family VE98_C0001G0165 PF01225 Mur ligase family, catalytic domain VE98_C0001G0165 PF02875 Mur ligase family, glutamate ligase domain VE98_C0001G0165 PF08245 Mur ligase middle domain VE98_C0001G0166 PF08478 POTRA domain, FtsQ-type VE98_C0001G0168 PF12169 DNA polymerase III subunits gamma and tau domain III VE98_C0001G0168 PF13177 DNA polymerase III, delta subunit VE98_C0001G0169 PF00772 DnaB-like helicase N terminal domain VE98_C0001G0169 PF03796 DnaB-like helicase C terminal domain VE98_C0001G0172 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VE98_C0001G0173 PF02575 YbaB/EbfC DNA-binding family VE98_C0001G0174 PF02132 RecR protein VE98_C0001G0174 PF13662 Toprim domain VE98_C0001G0175 PF00892 EamA-like transporter family VE98_C0001G0176 PF01406 tRNA synthetases class I (C) catalytic domain VE98_C0001G0176 PF09190 DALR domain VE98_C0001G0177 PF07853 VE98_C0001G0177 VE98_C0001G0177 PF13630 VE98_C0001G0177 VE98_C0001G0178 PF01022 Bacterial regulatory protein, arsR family VE98_C0001G0179 PF00300 Histidine phosphatase superfamily (branch 1) VE98_C0001G0180 PF01928 CYTH domain VE98_C0001G0181 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VE98_C0001G0181 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VE98_C0001G0184 PF01699 Sodium/calcium exchanger protein VE98_C0001G0185 PF00140 Sigma-70 factor, region 1 VE98_C0001G0185 PF04539 Sigma-70 region 3 VE98_C0001G0185 PF04542 Sigma-70 region 2 VE98_C0001G0185 PF04545 Sigma-70, region 4 VE98_C0001G0186 PF13473 Cupredoxin-like domain VE98_C0001G0187 PF07995 Glucose / Sorbosone dehydrogenase VE98_C0001G0193 PF00521 DNA gyrase/topoisomerase IV, subunit A VE98_C0001G0193 PF03989 DNA gyrase C-terminal domain, beta-propeller VE98_C0001G0195 PF00575 S1 RNA binding domain VE98_C0001G0195 PF14520 Helix-hairpin-helix domain VE98_C0001G0196 PF00009 Elongation factor Tu GTP binding domain VE98_C0001G0196 PF04760 Translation initiation factor IF-2, N-terminal region VE98_C0001G0196 PF11987 Translation-initiation factor 2 VE98_C0001G0197 PF02033 Ribosome-binding factor A VE98_C0001G0198 PF01368 DHH family VE98_C0001G0198 PF02272 DHHA1 domain VE98_C0001G0199 PF00035 Double-stranded RNA binding motif VE98_C0001G0199 PF14622 Ribonuclease-III-like VE98_C0001G0200 PF01029 NusB family VE98_C0001G0201 PF01783 Ribosomal L32p protein family VE98_C0001G0202 PF02620 VE98_C0001G0202 VE98_C0001G0203 PF00886 Ribosomal protein S16 VE98_C0001G0204 PF13083 KH domain VE98_C0001G0205 PF09827 CRISPR associated protein Cas2 VE98_C0001G0206 PF01746 tRNA (Guanine-1)-methyltransferase VE98_C0001G0209 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VE98_C0001G0210 PF00271 Helicase conserved C-terminal domain VE98_C0001G0210 PF02151 UvrB/uvrC motif VE98_C0001G0210 PF04851 Type III restriction enzyme, res subunit VE98_C0001G0210 PF12344 Ultra-violet resistance protein B VE98_C0001G0211 PF01594 VE98_C0001G0211 VE98_C0001G0213 PF02481 DNA recombination-mediator protein A VE98_C0001G0214 PF01131 DNA topoisomerase VE98_C0001G0214 PF01396 VE98_C0001G0214 VE98_C0001G0214 PF01751 Toprim domain VE98_C0001G0217 PF01541 GIY-YIG catalytic domain VE98_C0001G0217 PF02151 UvrB/uvrC motif VE98_C0001G0217 PF08459 UvrC Helix-hairpin-helix N-terminal VE98_C0001G0217 PF14520 Helix-hairpin-helix domain VE98_C0001G0219 PF04545 Sigma-70, region 4 VE98_C0001G0220 PF01935 Domain of unknown function DUF87 VE98_C0001G0220 PF12696 TraM recognition site of TraD and TraG VE98_C0001G0223 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VE98_C0001G0224 PF00533 BRCA1 C Terminus (BRCT) domain VE98_C0001G0224 PF01653 NAD-dependent DNA ligase adenylation domain VE98_C0001G0224 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VE98_C0001G0224 PF03120 NAD-dependent DNA ligase OB-fold domain VE98_C0001G0224 PF12826 Helix-hairpin-helix motif VE98_C0001G0225 PF01219 Prokaryotic diacylglycerol kinase VE98_C0001G0226 PF02686 Glu-tRNAGln amidotransferase C subunit VE98_C0001G0227 PF01425 Amidase VE98_C0001G0229 PF02637 GatB domain VE98_C0001G0229 PF02934 GatB/GatE catalytic domain VE98_C0001G0231 PF02534 Type IV secretory system Conjugative DNA transfer VE98_C0001G0237 PF01551 Peptidase family M23 VE98_C0001G0239 PF00270 DEAD/DEAH box helicase VE98_C0001G0239 PF00271 Helicase conserved C-terminal domain VE98_C0001G0239 PF02559 CarD-like/TRCF domain VE98_C0001G0239 PF03461 TRCF domain VE98_C0001G0241 PF01195 Peptidyl-tRNA hydrolase VE98_C0001G0244 PF01926 50S ribosome-binding GTPase VE98_C0001G0244 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VE98_C0001G0245 PF00768 D-alanyl-D-alanine carboxypeptidase VE98_C0001G0246 PF00152 tRNA synthetases class II (D, K and N) VE98_C0001G0246 PF01336 OB-fold nucleic acid binding domain VE98_C0001G0249 PF01380 SIS domain VE98_C0001G0249 PF10432 Bacterial phospho-glucose isomerase C-terminal region VE98_C0001G0250 PF01261 Xylose isomerase-like TIM barrel VE98_C0001G0251 PF01068 ATP dependent DNA ligase domain VE98_C0001G0251 PF04679 ATP dependent DNA ligase C terminal region VE98_C0001G0252 PF00140 Sigma-70 factor, region 1 VE98_C0001G0252 PF04539 Sigma-70 region 3 VE98_C0001G0252 PF04542 Sigma-70 region 2 VE98_C0001G0252 PF04545 Sigma-70, region 4 VE98_C0001G0254 PF13522 Glutamine amidotransferase domain VE98_C0001G0256 PF00578 AhpC/TSA family VE98_C0001G0259 PF02274 Amidinotransferase VE98_C0001G0260 PF00202 Aminotransferase class-III VE98_C0001G0262 PF00534 Glycosyl transferases group 1 VE98_C0001G0262 PF13439 Glycosyltransferase Family 4 VE98_C0001G0263 PF00749 tRNA synthetases class I (E and Q), catalytic domain VE98_C0001G0264 PF03808 VE98_C0001G0264 VE98_C0001G0265 PF00534 Glycosyl transferases group 1 VE98_C0001G0265 PF13439 Glycosyltransferase Family 4 VE98_C0001G0266 PF00534 Glycosyl transferases group 1 VE98_C0001G0266 PF13439 Glycosyltransferase Family 4 VE98_C0001G0267 PF08308 VE98_C0001G0267 VE98_C0001G0268 PF04203 Sortase family VE98_C0001G0269 PF00085 Thioredoxin VE98_C0001G0271 PF00464 Serine hydroxymethyltransferase VE98_C0001G0272 PF01170 Putative RNA methylase family UPF0020 VE98_C0001G0275 PF01016 Ribosomal L27 protein VE98_C0001G0276 PF00117 Glutamine amidotransferase class-I VE98_C0001G0276 PF06418 CTP synthase N-terminus VE98_C0001G0277 PF00842 Alanine racemase, C-terminal domain VE98_C0001G0277 PF01168 Alanine racemase, N-terminal domain VE98_C0001G0278 PF00204 DNA gyrase B VE98_C0001G0278 PF00986 DNA gyrase B subunit, carboxyl terminus VE98_C0001G0278 PF01751 Toprim domain VE98_C0001G0278 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VE98_C0001G0279 PF01588 Putative tRNA binding domain VE98_C0001G0279 PF03147 Ferredoxin-fold anticodon binding domain VE98_C0001G0279 PF03483 B3/4 domain VE98_C0001G0279 PF03484 tRNA synthetase B5 domain VE98_C0001G0280 PF01409 tRNA synthetases class II core domain (F) VE98_C0001G0280 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VE98_C0001G0282 PF00929 Exonuclease VE98_C0001G0283 PF07949 YbbR-like protein VE98_C0001G0284 PF02457 DisA bacterial checkpoint controller nucleotide-binding VE98_C0001G0287 PF07883 Cupin domain VE98_C0001G0289 PF02535 VE98_C0001G0289 VE98_C0001G0290 PF02687 VE98_C0001G0290 VE98_C0001G0290 PF12704 MacB-like periplasmic core domain VE98_C0001G0291 PF00005 ABC transporter VE98_C0001G0293 PF00471 Ribosomal protein L33 VE98_C0001G0294 PF02357 Transcription termination factor nusG VE98_C0001G0295 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VE98_C0001G0296 PF00380 Ribosomal protein S9/S16 VE98_C0001G0297 PF00572 Ribosomal protein L13 VE98_C0001G0298 PF01196 Ribosomal protein L17 VE98_C0001G0299 PF01000 RNA polymerase Rpb3/RpoA insert domain VE98_C0001G0299 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VE98_C0001G0299 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VE98_C0001G0300 PF00163 Ribosomal protein S4/S9 N-terminal domain VE98_C0001G0300 PF01479 S4 domain VE98_C0001G0301 PF00411 Ribosomal protein S11 VE98_C0001G0302 PF00416 Ribosomal protein S13/S18 VE98_C0001G0303 PF00444 Ribosomal protein L36 VE98_C0001G0304 PF01176 Translation initiation factor 1A / IF-1 VE98_C0001G0305 PF00557 Metallopeptidase family M24 VE98_C0001G0306 PF00406 Adenylate kinase VE98_C0001G0307 PF00344 SecY translocase VE98_C0001G0308 PF00828 Ribosomal protein L18e/L15 VE98_C0001G0309 PF00333 Ribosomal protein S5, N-terminal domain VE98_C0001G0309 PF03719 Ribosomal protein S5, C-terminal domain VE98_C0001G0310 PF00861 Ribosomal L18p/L5e family VE98_C0001G0311 PF00347 Ribosomal protein L6 VE98_C0001G0312 PF00410 Ribosomal protein S8 VE98_C0001G0313 PF00253 Ribosomal protein S14p/S29e VE98_C0001G0314 PF00281 Ribosomal protein L5 VE98_C0001G0314 PF00673 ribosomal L5P family C-terminus VE98_C0001G0315 PF17136 VE98_C0001G0315 VE98_C0001G0316 PF00238 Ribosomal protein L14p/L23e VE98_C0001G0317 PF00366 Ribosomal protein S17 VE98_C0001G0318 PF00831 Ribosomal L29 protein VE98_C0001G0319 PF00252 Ribosomal protein L16p/L10e VE98_C0001G0320 PF00189 Ribosomal protein S3, C-terminal domain VE98_C0001G0320 PF07650 KH domain VE98_C0001G0321 PF00237 Ribosomal protein L22p/L17e VE98_C0001G0322 PF00203 Ribosomal protein S19 VE98_C0001G0323 PF00181 Ribosomal Proteins L2, RNA binding domain VE98_C0001G0323 PF03947 Ribosomal Proteins L2, C-terminal domain VE98_C0001G0324 PF00276 Ribosomal protein L23 VE98_C0001G0325 PF00573 Ribosomal protein L4/L1 family VE98_C0001G0326 PF00297 Ribosomal protein L3 VE98_C0001G0327 PF00338 Ribosomal protein S10p/S20e VE98_C0001G0328 PF00009 Elongation factor Tu GTP binding domain VE98_C0001G0328 PF03143 Elongation factor Tu C-terminal domain VE98_C0001G0328 PF03144 Elongation factor Tu domain 2 VE98_C0001G0331 PF00009 Elongation factor Tu GTP binding domain VE98_C0001G0331 PF00679 Elongation factor G C-terminus VE98_C0001G0331 PF03144 Elongation factor Tu domain 2 VE98_C0001G0331 PF03764 Elongation factor G, domain IV VE98_C0001G0331 PF14492 Elongation Factor G, domain II VE98_C0001G0332 PF00177 Ribosomal protein S7p/S5e VE98_C0001G0333 PF00164 Ribosomal protein S12/S23 VE98_C0001G0334 PF00623 RNA polymerase Rpb1, domain 2 VE98_C0001G0334 PF04983 RNA polymerase Rpb1, domain 3 VE98_C0001G0334 PF04997 RNA polymerase Rpb1, domain 1 VE98_C0001G0334 PF04998 RNA polymerase Rpb1, domain 5 VE98_C0001G0335 PF00562 RNA polymerase Rpb2, domain 6 VE98_C0001G0335 PF04560 RNA polymerase Rpb2, domain 7 VE98_C0001G0335 PF04561 RNA polymerase Rpb2, domain 2 VE98_C0001G0335 PF04563 RNA polymerase beta subunit VE98_C0001G0335 PF04565 RNA polymerase Rpb2, domain 3 VE98_C0001G0335 PF10385 RNA polymerase beta subunit external 1 domain VE98_C0001G0337 PF01435 Peptidase family M48 VE98_C0001G0338 PF04011 LemA family VE98_C0001G0339 PF02698 DUF218 domain VE98_C0001G0340 PF01476 LysM domain VE98_C0001G0341 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VE98_C0001G0342 PF03840 Preprotein translocase SecG subunit VE98_C0001G0343 PF04519 VE98_C0001G0343 VE98_C0001G0344 PF00781 Diacylglycerol kinase catalytic domain VE98_C0001G0345 PF00707 Translation initiation factor IF-3, C-terminal domain VE98_C0001G0345 PF05198 Translation initiation factor IF-3, N-terminal domain VE98_C0001G0346 PF01632 Ribosomal protein L35 VE98_C0001G0347 PF00453 Ribosomal protein L20 VE98_C0001G0350 PF13196 VE98_C0001G0350 VE98_C0001G0351 PF00534 Glycosyl transferases group 1 VE98_C0001G0351 PF13439 Glycosyltransferase Family 4 VE98_C0001G0352 PF00534 Glycosyl transferases group 1 VE98_C0001G0352 PF13439 Glycosyltransferase Family 4 VE98_C0001G0353 PF02397 VE98_C0001G0353 VE98_C0001G0353 PF13727 CoA-binding domain VE98_C0001G0354 PF00485 Phosphoribulokinase / Uridine kinase family VE98_C0001G0357 PF00801 PKD domain VE98_C0001G0359 PF01476 LysM domain VE98_C0001G0359 PF06030 VE98_C0001G0359 VE98_C0001G0360 PF01476 LysM domain VE98_C0001G0362 PF11028 VE98_C0001G0362 VE98_C0001G0364 PF10131 VE98_C0001G0364 VE98_C0001G0365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VE98_C0001G0365 PF03129 Anticodon binding domain VE98_C0001G0365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VE98_C0001G0366 PF04932 VE98_C0001G0366 VE98_C0001G0367 PF01715 IPP transferase VE98_C0001G0368 PF00535 Glycosyl transferase family 2 VE98_C0001G0369 PF04138 VE98_C0001G0369 VE98_C0001G0370 PF13489 Methyltransferase domain VE98_C0001G0372 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VE98_C0001G0372 PF03129 Anticodon binding domain VE98_C0001G0374 PF02274 Amidinotransferase VE98_C0001G0375 PF00750 tRNA synthetases class I (R) VE98_C0001G0375 PF03485 Arginyl tRNA synthetase N terminal domain VE98_C0001G0375 PF05746 DALR anticodon binding domain VE98_C0001G0376 PF01546 Peptidase family M20/M25/M40 VE98_C0001G0376 PF07687 Peptidase dimerisation domain VE98_C0001G0379 PF01476 LysM domain VE98_C0001G0379 PF06030 VE98_C0001G0379 VE98_C0001G0381 PF01476 LysM domain VE98_C0001G0381 PF06030 VE98_C0001G0381 VE98_C0001G0382 PF00801 PKD domain VE98_C0001G0382 PF06739 VE98_C0001G0382 VE98_C0001G0385 PF09587 Bacterial capsule synthesis protein PGA_cap VE98_C0001G0386 PF01078 Magnesium chelatase, subunit ChlI VE98_C0001G0386 PF13335 VE98_C0001G0386 VE98_C0001G0386 PF13541 Subunit ChlI of Mg-chelatase VE98_C0001G0394 PF01327 Polypeptide deformylase VE98_C0001G0395 PF00551 Formyl transferase VE98_C0001G0395 PF02911 Formyl transferase, C-terminal domain VE98_C0001G0401 PF00206 Lyase VE98_C0001G0402 PF01018 GTP1/OBG VE98_C0001G0402 PF01926 50S ribosome-binding GTPase VE98_C0001G0402 PF09269 Domain of unknown function (DUF1967) VE98_C0001G0403 PF01833 IPT/TIG domain VE98_C0001G0407 PF01197 Ribosomal protein L31 VE98_C0001G0408 PF00472 RF-1 domain VE98_C0001G0408 PF03462 PCRF domain VE98_C0001G0409 PF13649 Methyltransferase domain VE98_C0001G0410 PF00625 Guanylate kinase VE98_C0001G0411 PF00849 RNA pseudouridylate synthase VE98_C0001G0412 PF01252 VE98_C0001G0412 VE98_C0001G0413 PF01258 Prokaryotic dksA/traR C4-type zinc finger VE98_C0001G0414 PF02080 TrkA-C domain VE98_C0001G0414 PF02254 TrkA-N domain VE98_C0001G0414 PF07885 Ion channel VE98_C0001G0416 PF02646 VE98_C0001G0416 VE98_C0001G0417 PF01790 VE98_C0001G0417 VE98_C0001G0419 PF01668 SmpB protein VE98_C0001G0424 PF13205 Bacterial Ig-like domain VE98_C0001G0426 PF13456 Reverse transcriptase-like VE98_C0001G0427 PF00300 Histidine phosphatase superfamily (branch 1) VE98_C0001G0428 PF02163 Peptidase family M50 VE98_C0001G0429 PF00830 Ribosomal L28 family VE98_C0001G0430 PF13483 Beta-lactamase superfamily domain VE98_C0001G0433 PF03703 VE98_C0001G0433 VE98_C0001G0435 PF00076 RNA recognition motif VE98_C0001G0436 PF00515 Tetratricopeptide repeat VE98_C0001G0437 PF01943 VE98_C0001G0437 VE98_C0001G0437 PF14667 Polysaccharide biosynthesis C-terminal domain VE98_C0001G0438 PF02348 Cytidylyltransferase VE98_C0001G0438 PF08282 haloacid dehalogenase-like hydrolase VE98_C0001G0439 PF03102 NeuB family VE98_C0001G0439 PF08666 SAF domain VE98_C0001G0440 PF04230 VE98_C0001G0440 VE98_C0001G0441 PF13489 Methyltransferase domain VE98_C0001G0443 PF13641 Glycosyltransferase like family 2 VE98_C0001G0445 PF04932 VE98_C0001G0445 VE98_C0001G0446 PF00515 Tetratricopeptide repeat VE98_C0001G0447 PF00515 Tetratricopeptide repeat VE98_C0001G0451 PF04542 Sigma-70 region 2 VE98_C0001G0451 PF08281 Sigma-70, region 4 VE98_C0001G0453 PF04542 Sigma-70 region 2 VE98_C0001G0453 PF08281 Sigma-70, region 4 VE98_C0001G0454 PF03054 tRNA methyl transferase VE98_C0001G0456 PF13411 MerR HTH family regulatory protein VE98_C0001G0457 PF00334 Nucleoside diphosphate kinase VE98_C0001G0458 PF00675 Insulinase (Peptidase family M16) VE98_C0001G0458 PF05193 Peptidase M16 inactive domain VE98_C0001G0459 PF00013 KH domain VE98_C0001G0459 PF01966 HD domain VE98_C0001G0459 PF12072 VE98_C0001G0459 VE98_C0001G0461 PF00932 Lamin Tail Domain VE98_C0001G0462 PF02367 Uncharacterised P-loop hydrolase UPF0079 VE98_C0001G0463 PF00814 Glycoprotease family VE98_C0001G0467 PF03703 VE98_C0001G0467 VE98_C0001G0467 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VE98_C0001G0469 PF05491 Holliday junction DNA helicase ruvB C-terminus VE98_C0001G0469 PF05496 Holliday junction DNA helicase ruvB N-terminus VE98_C0001G0470 PF06695 VE98_C0001G0470 VE98_C0001G0471 PF02673 VE98_C0001G0471 VE98_C0001G0472 PF00082 Subtilase family VE98_C0001G0475 PF01743 Poly A polymerase head domain VE98_C0001G0476 PF01026 TatD related DNase VE98_C0001G0477 PF00892 EamA-like transporter family VE98_C0001G0478 PF09334 tRNA synthetases class I (M) VE98_C0001G0479 PF02631 RecX family VE98_C0001G0480 PF00462 Glutaredoxin VE98_C0001G0481 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VE98_C0001G0481 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain VE98_C0001G0482 PF07992 Pyridine nucleotide-disulphide oxidoreductase VE98_C0001G0484 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VE98_C0001G0486 PF00216 Bacterial DNA-binding protein VE98_C0001G0487 PF03652 Uncharacterised protein family (UPF0081) VE98_C0001G0489 PF14450 Cell division protein FtsA VE98_C0001G0490 PF01411 tRNA synthetases class II (A) VE98_C0001G0490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VE98_C0001G0494 PF00266 Aminotransferase class-V VE98_C0001G0496 PF01386 Ribosomal L25p family VE98_C0001G0496 PF14693 Ribosomal protein TL5, C-terminal domain VE98_C0001G0498 PF00953 Glycosyl transferase family 4 VE98_C0001G0499 PF12647 VE98_C0001G0499 VE98_C0001G0500 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) VE98_C0001G0501 PF00753 Metallo-beta-lactamase superfamily VE98_C0001G0502 PF03772 VE98_C0001G0502 VE98_C0001G0502 PF13567 VE98_C0001G0502 VE98_C0001G0503 PF02618 YceG-like family VE98_C0001G0505 PF01330 RuvA N terminal domain VE98_C0001G0505 PF07499 RuvA, C-terminal domain VE98_C0001G0505 PF14520 Helix-hairpin-helix domain VE98_C0001G0506 PF02075 Crossover junction endodeoxyribonuclease RuvC VE98_C0001G0507 PF01709 Transcriptional regulator VE98_C0001G0508 PF00580 UvrD/REP helicase N-terminal domain VE98_C0001G0508 PF13361 UvrD-like helicase C-terminal domain VE98_C0001G0509 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel VE98_C0001G0510 PF00398 Ribosomal RNA adenine dimethylase VE98_C0001G0511 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VE98_C0001G0514 PF03734 L,D-transpeptidase catalytic domain VE98_C0001G0516 PF00154 recA bacterial DNA recombination protein VE98_C0001G0517 PF04461 Protein of unknown function (DUF520) VE98_C0001G0518 PF05635 23S rRNA-intervening sequence protein VE98_C0001G0519 PF01580 FtsK/SpoIIIE family VE98_C0001G0519 PF09397 Ftsk gamma domain VE98_C0001G0519 PF13491 VE98_C0001G0519 VE98_C0001G0523 PF00753 Metallo-beta-lactamase superfamily VE98_C0001G0523 PF07521 RNA-metabolising metallo-beta-lactamase VE98_C0001G0524 PF03167 Uracil DNA glycosylase superfamily VE98_C0001G0525 PF00013 KH domain VE98_C0001G0525 PF00575 S1 RNA binding domain VE98_C0001G0525 PF01138 3' exoribonuclease family, domain 1 VE98_C0001G0525 PF03725 3' exoribonuclease family, domain 2 VE98_C0001G0525 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VE98_C0001G0526 PF00312 Ribosomal protein S15 VE98_C0001G0527 PF01368 DHH family VE98_C0001G0527 PF02272 DHHA1 domain VE98_C0001G0528 PF01649 Ribosomal protein S20 VE98_C0001G0529 PF06144 DNA polymerase III, delta subunit VE98_C0001G0530 PF04294 VE98_C0001G0530 VE98_C0001G0530 PF12229 Putative peptidoglycan binding domain VE98_C0001G0532 PF03030 Inorganic H+ pyrophosphatase VE98_C0001G0533 PF00534 Glycosyl transferases group 1 VE98_C0001G0533 PF13439 Glycosyltransferase Family 4 VE98_C0001G0534 PF04932 VE98_C0001G0534 VE98_C0001G0535 PF04932 VE98_C0001G0535 VE98_C0001G0536 PF00534 Glycosyl transferases group 1 VE98_C0001G0536 PF13439 Glycosyltransferase Family 4 VE98_C0001G0537 PF01943 VE98_C0001G0537 VE98_C0001G0537 PF14667 Polysaccharide biosynthesis C-terminal domain VE98_C0001G0538 PF13649 Methyltransferase domain VE98_C0001G0539 PF01424 R3H domain VE98_C0001G0540 PF02096 60Kd inner membrane protein VE98_C0001G0541 PF00825 Ribonuclease P VE98_C0001G0542 PF00468 Ribosomal protein L34 VE98_C0001G0543 PF00308 Bacterial dnaA protein VE98_C0001G0543 PF08299 Bacterial dnaA protein helix-turn-helix VE98_C0001G0543 PF11638 DnaA N-terminal domain VE98_C0001G0544 PF00712 DNA polymerase III beta subunit, N-terminal domain VE98_C0001G0544 PF02767 DNA polymerase III beta subunit, central domain VE98_C0001G0544 PF02768 DNA polymerase III beta subunit, C-terminal domain VE98_C0001G0545 PF02463 RecF/RecN/SMC N terminal domain VE98_C0001G0546 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VE98_C0001G0546 PF06827 Zinc finger found in FPG and IleRS VE98_C0001G0546 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VE98_C0001G0548 PF00476 DNA polymerase family A VE98_C0001G0548 PF01367 5'-3' exonuclease, C-terminal SAM fold VE98_C0001G0548 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VE98_C0001G0549 PF04402 Protein of unknown function (DUF541) VE98_C0001G0550 PF02875 Mur ligase family, glutamate ligase domain VE98_C0001G0550 PF08245 Mur ligase middle domain VE98_C0001G0551 PF02388 FemAB family VE98_C0001G0552 PF00814 Glycoprotease family VE98_C0001G0553 PF00133 tRNA synthetases class I (I, L, M and V) VE98_C0001G0553 PF08264 Anticodon-binding domain of tRNA VE98_C0001G0555 PF00437 Type II/IV secretion system protein VE98_C0001G0555 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VE98_C0001G0557 PF12846 AAA-like domain VE98_C0001G0559 PF12666 VE98_C0001G0559 VE98_C0001G0564 PF14437 VE98_C0001G0564 VE98_C0001G0567 PF13416 Bacterial extracellular solute-binding protein VE98_C0001G0568 PF00483 Nucleotidyl transferase VE98_C0001G0569 PF00011 Hsp20/alpha crystallin family VE98_C0001G0570 PF08486 VE98_C0001G0570 VE98_C0001G0571 PF00156 Phosphoribosyl transferase domain VE98_C0001G0572 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VE98_C0001G0572 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VE98_C0001G0572 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VE98_C0001G0572 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VE98_C0001G0573 PF00579 tRNA synthetases class I (W and Y) VE98_C0001G0575 PF04932 VE98_C0001G0575 VE98_C0001G0577 PF00133 tRNA synthetases class I (I, L, M and V) VE98_C0001G0577 PF08264 Anticodon-binding domain of tRNA VE98_C0001G0577 PF09334 tRNA synthetases class I (M) VE98_C0001G0577 PF13603 Leucyl-tRNA synthetase, Domain 2 VE98_C0001G0579 PF02811 PHP domain VE98_C0001G0579 PF07733 Bacterial DNA polymerase III alpha subunit VE98_C0001G0579 PF14579 Helix-hairpin-helix motif VE98_C0001G0581 PF01245 Ribosomal protein L19 VE98_C0001G0582 PF01351 Ribonuclease HII VE98_C0001G0583 PF02021 Uncharacterised protein family UPF0102 VE98_C0001G0584 PF00575 S1 RNA binding domain VE98_C0001G0584 PF08529 NusA N-terminal domain VE98_C0001G0584 PF13184 NusA-like KH domain VE98_C0001G0585 PF00004 ATPase family associated with various cellular activities (AAA) VE98_C0001G0585 PF02151 UvrB/uvrC motif VE98_C0001G0585 PF02861 Clp amino terminal domain VE98_C0001G0585 PF07724 AAA domain (Cdc48 subfamily) VE98_C0001G0585 PF10431 C-terminal, D2-small domain, of ClpB protein VE98_C0001G0586 PF01938 TRAM domain VE98_C0001G0589 PF14827 Sensory domain of two-component sensor kinase VE98_C0001G0591 PF01926 50S ribosome-binding GTPase VE98_C0001G0591 PF06071 Protein of unknown function (DUF933) VE98_C0001G0592 PF01132 Elongation factor P (EF-P) OB domain VE98_C0001G0592 PF08207 Elongation factor P (EF-P) KOW-like domain VE98_C0001G0592 PF09285 Elongation factor P, C-terminal VE98_C0001G0593 PF01084 Ribosomal protein S18 VE98_C0001G0594 PF00436 Single-strand binding protein family VE98_C0001G0595 PF01250 Ribosomal protein S6