VE98_C0001G0006	SM00400	zinc finger
VE98_C0001G0006	SM00493	VE98_C0001G0006
VE98_C0001G0012	SM00857	Resolvase, N terminal domain
VE98_C0001G0016	SM00857	Resolvase, N terminal domain
VE98_C0001G0029	SM00363	S4 RNA-binding domain
VE98_C0001G0034	SM00382	ATPases associated with a variety of cellular activities
VE98_C0001G0046	SM00271	DnaJ molecular chaperone homology domain
VE98_C0001G0062	SM00257	Lysin motif
VE98_C0001G0066	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VE98_C0001G0069	SM00278	Helix-hairpin-helix DNA-binding motif class 1
VE98_C0001G0071	SM00487	DEAD-like helicases superfamily
VE98_C0001G0071	SM00490	helicase superfamily c-terminal domain
VE98_C0001G0074	SM00363	S4 RNA-binding domain
VE98_C0001G0082	SM00028	Tetratricopeptide repeats
VE98_C0001G0084	SM00649	Ribosomal protein L11/L12
VE98_C0001G0096	SM00028	Tetratricopeptide repeats
VE98_C0001G0098	SM00635	Bacterial Ig-like domain 2
VE98_C0001G0112	SM00842	Cell division protein FtsA
VE98_C0001G0113	SM00864	Tubulin/FtsZ family, GTPase domain
VE98_C0001G0113	SM00865	Tubulin/FtsZ family, C-terminal domain
VE98_C0001G0118	SM01152	VE98_C0001G0118
VE98_C0001G0128	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VE98_C0001G0137	SM00957	SecA DEAD-like domain
VE98_C0001G0137	SM00958	SecA preprotein cross-linking domain
VE98_C0001G0141	SM00937	VE98_C0001G0141
VE98_C0001G0142	SM00382	ATPases associated with a variety of cellular activities
VE98_C0001G0145	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VE98_C0001G0145	SM00245	tail specific protease
VE98_C0001G0157	SM00507	HNH nucleases
VE98_C0001G0159	SM00909	Sporulation and spore germination
VE98_C0001G0168	SM00382	ATPases associated with a variety of cellular activities
VE98_C0001G0174	SM00493	VE98_C0001G0174
VE98_C0001G0178	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VE98_C0001G0179	SM00855	Phosphoglycerate mutase family
VE98_C0001G0180	SM01118	VE98_C0001G0180
VE98_C0001G0193	SM00434	DNA Topoisomerase IV
VE98_C0001G0195	SM00316	Ribosomal protein S1-like RNA-binding domain
VE98_C0001G0199	SM00358	Double-stranded RNA binding motif
VE98_C0001G0199	SM00535	Ribonuclease III family
VE98_C0001G0210	SM00487	DEAD-like helicases superfamily
VE98_C0001G0210	SM00490	helicase superfamily c-terminal domain
VE98_C0001G0214	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
VE98_C0001G0214	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
VE98_C0001G0214	SM00493	VE98_C0001G0214
VE98_C0001G0216	SM00382	ATPases associated with a variety of cellular activities
VE98_C0001G0217	SM00465	GIY-YIG type nucleases (URI domain)
VE98_C0001G0224	SM00292	breast cancer carboxy-terminal domain
VE98_C0001G0224	SM00532	Ligase N family
VE98_C0001G0229	SM00845	GatB domain
VE98_C0001G0239	SM00487	DEAD-like helicases superfamily
VE98_C0001G0239	SM00490	helicase superfamily c-terminal domain
VE98_C0001G0239	SM00982	VE98_C0001G0239
VE98_C0001G0239	SM01058	CarD-like/TRCF domain
VE98_C0001G0250	SM00518	AP endonuclease family 2
VE98_C0001G0277	SM01005	Alanine racemase, C-terminal domain
VE98_C0001G0278	SM00387	Histidine kinase-like ATPases
VE98_C0001G0278	SM00433	TopoisomeraseII
VE98_C0001G0279	SM00873	B3/4 domain
VE98_C0001G0279	SM00874	tRNA synthetase B5 domain
VE98_C0001G0279	SM00896	Ferredoxin-fold anticodon binding domain
VE98_C0001G0282	SM00479	VE98_C0001G0282
VE98_C0001G0291	SM00382	ATPases associated with a variety of cellular activities
VE98_C0001G0294	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
VE98_C0001G0294	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
VE98_C0001G0299	SM00662	RNA polymerases D
VE98_C0001G0300	SM00363	S4 RNA-binding domain
VE98_C0001G0300	SM01390	VE98_C0001G0300
VE98_C0001G0304	SM00316	Ribosomal protein S1-like RNA-binding domain
VE98_C0001G0315	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
VE98_C0001G0316	SM01374	VE98_C0001G0316
VE98_C0001G0320	SM00322	K homology RNA-binding domain
VE98_C0001G0323	SM01382	VE98_C0001G0323
VE98_C0001G0323	SM01383	VE98_C0001G0323
VE98_C0001G0327	SM01403	VE98_C0001G0327
VE98_C0001G0331	SM00838	Elongation factor G C-terminus
VE98_C0001G0331	SM00889	Elongation factor G, domain IV
VE98_C0001G0334	SM00663	RNA polymerase I subunit A N-terminus
VE98_C0001G0340	SM00257	Lysin motif
VE98_C0001G0344	SM00046	Diacylglycerol kinase catalytic domain (presumed)
VE98_C0001G0357	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
VE98_C0001G0359	SM00257	Lysin motif
VE98_C0001G0360	SM00257	Lysin motif
VE98_C0001G0365	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
VE98_C0001G0375	SM00836	DALR anticodon binding domain
VE98_C0001G0375	SM01016	Arginyl tRNA synthetase N terminal dom
VE98_C0001G0379	SM00257	Lysin motif
VE98_C0001G0381	SM00257	Lysin motif
VE98_C0001G0382	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
VE98_C0001G0385	SM00854	Bacterial capsule synthesis protein PGA_cap
VE98_C0001G0386	SM00382	ATPases associated with a variety of cellular activities
VE98_C0001G0401	SM00998	Adenylosuccinate lyase C-terminus
VE98_C0001G0408	SM00937	VE98_C0001G0408
VE98_C0001G0410	SM00072	Guanylate kinase homologues.
VE98_C0001G0427	SM00855	Phosphoglycerate mutase family
VE98_C0001G0435	SM00360	RNA recognition motif
VE98_C0001G0436	SM00028	Tetratricopeptide repeats
VE98_C0001G0439	SM00858	VE98_C0001G0439
VE98_C0001G0446	SM00028	Tetratricopeptide repeats
VE98_C0001G0447	SM00028	Tetratricopeptide repeats
VE98_C0001G0457	SM00562	VE98_C0001G0457
VE98_C0001G0459	SM00322	K homology RNA-binding domain
VE98_C0001G0459	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
VE98_C0001G0469	SM00382	ATPases associated with a variety of cellular activities
VE98_C0001G0481	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
VE98_C0001G0486	SM00411	bacterial (prokaryotic) histone like domain
VE98_C0001G0487	SM00732	Likely ribonuclease with RNase H fold.
VE98_C0001G0489	SM00842	Cell division protein FtsA
VE98_C0001G0490	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
VE98_C0001G0501	SM00849	Metallo-beta-lactamase superfamily
VE98_C0001G0505	SM00278	Helix-hairpin-helix DNA-binding motif class 1
VE98_C0001G0510	SM00650	Ribosomal RNA adenine dimethylases
VE98_C0001G0516	SM00382	ATPases associated with a variety of cellular activities
VE98_C0001G0519	SM00382	ATPases associated with a variety of cellular activities
VE98_C0001G0519	SM00843	VE98_C0001G0519
VE98_C0001G0523	SM00849	Metallo-beta-lactamase superfamily
VE98_C0001G0524	SM00986	Uracil DNA glycosylase superfamily
VE98_C0001G0524	SM00987	UreE urease accessory protein, C-terminal domain 
VE98_C0001G0525	SM00316	Ribosomal protein S1-like RNA-binding domain
VE98_C0001G0525	SM00322	K homology RNA-binding domain
VE98_C0001G0526	SM01387	VE98_C0001G0526
VE98_C0001G0539	SM00393	Putative single-stranded nucleic acids-binding domain
VE98_C0001G0543	SM00382	ATPases associated with a variety of cellular activities
VE98_C0001G0543	SM00760	Bacterial dnaA protein helix-turn-helix domain
VE98_C0001G0544	SM00480	DNA polymerase III beta subunit
VE98_C0001G0546	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
VE98_C0001G0546	SM01232	VE98_C0001G0546
VE98_C0001G0548	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
VE98_C0001G0548	SM00475	5'-3' exonuclease
VE98_C0001G0548	SM00482	DNA polymerase A domain
VE98_C0001G0555	SM00382	ATPases associated with a variety of cellular activities
VE98_C0001G0579	SM00481	DNA polymerase alpha chain like domain
VE98_C0001G0584	SM00316	Ribosomal protein S1-like RNA-binding domain
VE98_C0001G0585	SM00382	ATPases associated with a variety of cellular activities
VE98_C0001G0585	SM01086	C-terminal, D2-small domain, of ClpB protein
VE98_C0001G0586	SM00670	Large family of predicted nucleotide-binding domains
VE98_C0001G0592	SM00841	Elongation factor P, C-terminal
VE98_C0001G0592	SM01185	VE98_C0001G0592
