##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM1516095v1 #!genome-build-accession NCBI_Assembly:GCA_015160955.1 ##sequence-region MT774377.1 1 93787 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2772061 MT774377.1 Genbank region 1 93787 . + . ID=MT774377.1:1..93787;Dbxref=taxon:2772061;collected-by=Stockdale_etal;collection-date=2015;country=Ireland;gbkey=Src;genome=genomic;identified-by=A. Shkoporov %26 S. Stockdale;isolation-source=human feces;mol_type=genomic DNA MT774377.1 Genbank CDS 400 579 . - 0 ID=cds-QOR58176.1;Dbxref=NCBI_GP:QOR58176.1;Name=QOR58176.1;Note=gp_13128%3B intracellular signaling%2C bacterial PH domain%2C transcription activator;gbkey=CDS;product=hypothetical protein;protein_id=QOR58176.1;transl_table=11 MT774377.1 Genbank CDS 821 1513 . - 0 ID=cds-QOR58177.1;Dbxref=NCBI_GP:QOR58177.1;Name=QOR58177.1;Note=gp_13129;gbkey=CDS;product=hypothetical protein;protein_id=QOR58177.1;transl_table=11 MT774377.1 Genbank CDS 1833 1988 . - 0 ID=cds-QOR58178.1;Dbxref=NCBI_GP:QOR58178.1;Name=QOR58178.1;Note=gp_13130;gbkey=CDS;product=hypothetical protein;protein_id=QOR58178.1;transl_table=11 MT774377.1 Genbank CDS 2036 2203 . - 0 ID=cds-QOR58179.1;Dbxref=NCBI_GP:QOR58179.1;Name=QOR58179.1;Note=gp_13131;gbkey=CDS;product=hypothetical protein;protein_id=QOR58179.1;transl_table=11 MT774377.1 Genbank CDS 2416 2556 . - 0 ID=cds-QOR58180.1;Dbxref=NCBI_GP:QOR58180.1;Name=QOR58180.1;Note=gp_13132;gbkey=CDS;product=hypothetical protein;protein_id=QOR58180.1;transl_table=11 MT774377.1 Genbank CDS 3071 3712 . + 0 ID=cds-QOR58181.1;Dbxref=NCBI_GP:QOR58181.1;Name=QOR58181.1;Note=gp_13133;gbkey=CDS;product=hypothetical protein;protein_id=QOR58181.1;transl_table=11 MT774377.1 Genbank CDS 3716 4261 . + 0 ID=cds-QOR58182.1;Dbxref=NCBI_GP:QOR58182.1;Name=QOR58182.1;Note=gp_13134%3B site-specific recombination co-factor%2C IHF;gbkey=CDS;product=site-specific recombination co-factor;protein_id=QOR58182.1;transl_table=11 MT774377.1 Genbank CDS 4218 4937 . + 0 ID=cds-QOR58183.1;Dbxref=NCBI_GP:QOR58183.1;Name=QOR58183.1;Note=gp_13135;gbkey=CDS;product=hypothetical protein;protein_id=QOR58183.1;transl_table=11 MT774377.1 Genbank CDS 4934 5932 . + 0 ID=cds-QOR58184.1;Dbxref=NCBI_GP:QOR58184.1;Name=QOR58184.1;Note=gp_13136;gbkey=CDS;product=DNA replication%2C ATP-dependent helicase;protein_id=QOR58184.1;transl_table=11 MT774377.1 Genbank CDS 5944 6561 . + 0 ID=cds-QOR58185.1;Dbxref=NCBI_GP:QOR58185.1;Name=QOR58185.1;Note=gp_13137;gbkey=CDS;product=hypothetical protein;protein_id=QOR58185.1;transl_table=11 MT774377.1 Genbank CDS 6558 6893 . + 0 ID=cds-QOR58186.1;Dbxref=NCBI_GP:QOR58186.1;Name=QOR58186.1;Note=gp_13138;gbkey=CDS;product=ATP synthase;protein_id=QOR58186.1;transl_table=11 MT774377.1 Genbank CDS 6916 7239 . + 0 ID=cds-QOR58187.1;Dbxref=NCBI_GP:QOR58187.1;Name=QOR58187.1;Note=gp_13139;gbkey=CDS;product=hypothetical protein;protein_id=QOR58187.1;transl_table=11 MT774377.1 Genbank CDS 7251 9548 . + 0 ID=cds-QOR58188.1;Dbxref=NCBI_GP:QOR58188.1;Name=QOR58188.1;Note=gp_13140;gbkey=CDS;product=terminase;protein_id=QOR58188.1;transl_table=11 MT774377.1 Genbank CDS 9551 9817 . + 0 ID=cds-QOR58189.1;Dbxref=NCBI_GP:QOR58189.1;Name=QOR58189.1;Note=gp_13141;gbkey=CDS;product=putative lipoprotein;protein_id=QOR58189.1;transl_table=11 MT774377.1 Genbank CDS 9814 12246 . + 0 ID=cds-QOR58190.1;Dbxref=NCBI_GP:QOR58190.1;Name=QOR58190.1;Note=gp_13142;gbkey=CDS;product=portal protein;protein_id=QOR58190.1;transl_table=11 MT774377.1 Genbank CDS 12619 13959 . + 0 ID=cds-QOR58191.1;Dbxref=NCBI_GP:QOR58191.1;Name=QOR58191.1;Note=gp_13143;gbkey=CDS;product=hypothetical protein;protein_id=QOR58191.1;transl_table=11 MT774377.1 Genbank CDS 13976 15451 . + 0 ID=cds-QOR58192.1;Dbxref=NCBI_GP:QOR58192.1;Name=QOR58192.1;Note=gp_13144;gbkey=CDS;product=major capsid protein;protein_id=QOR58192.1;transl_table=11 MT774377.1 Genbank CDS 15477 16631 . + 0 ID=cds-QOR58193.1;Dbxref=NCBI_GP:QOR58193.1;Name=QOR58193.1;Note=gp_13145;gbkey=CDS;product=hypothetical protein;protein_id=QOR58193.1;transl_table=11 MT774377.1 Genbank CDS 16644 17297 . + 0 ID=cds-QOR58194.1;Dbxref=NCBI_GP:QOR58194.1;Name=QOR58194.1;Note=gp_13146;gbkey=CDS;product=hypothetical protein;protein_id=QOR58194.1;transl_table=11 MT774377.1 Genbank CDS 17299 18189 . + 0 ID=cds-QOR58195.1;Dbxref=NCBI_GP:QOR58195.1;Name=QOR58195.1;Note=gp_13147;gbkey=CDS;product=hypothetical protein;protein_id=QOR58195.1;transl_table=11 MT774377.1 Genbank CDS 18282 18872 . + 0 ID=cds-QOR58196.1;Dbxref=NCBI_GP:QOR58196.1;Name=QOR58196.1;Note=gp_13148;gbkey=CDS;product=putative pholin;protein_id=QOR58196.1;transl_table=11 MT774377.1 Genbank CDS 18872 19090 . + 0 ID=cds-QOR58197.1;Dbxref=NCBI_GP:QOR58197.1;Name=QOR58197.1;Note=gp_13149;gbkey=CDS;product=hypothetical protein;protein_id=QOR58197.1;transl_table=11 MT774377.1 Genbank CDS 19087 20055 . + 0 ID=cds-QOR58198.1;Dbxref=NCBI_GP:QOR58198.1;Name=QOR58198.1;Note=gp_13150;gbkey=CDS;product=hypothetical protein;protein_id=QOR58198.1;transl_table=11 MT774377.1 Genbank CDS 20057 23518 . + 0 ID=cds-QOR58199.1;Dbxref=NCBI_GP:QOR58199.1;Name=QOR58199.1;Note=gp_13151;gbkey=CDS;product=phosphatase;protein_id=QOR58199.1;transl_table=11 MT774377.1 Genbank CDS 23521 31389 . + 0 ID=cds-QOR58200.1;Dbxref=NCBI_GP:QOR58200.1;Name=QOR58200.1;Note=gp_13152%3B similar to internalin%2C receptor-binding protein;gbkey=CDS;product=internalin-like protein;protein_id=QOR58200.1;transl_table=11 MT774377.1 Genbank CDS 31538 31816 . + 0 ID=cds-QOR58201.1;Dbxref=NCBI_GP:QOR58201.1;Name=QOR58201.1;Note=gp_13153;gbkey=CDS;product=hypothetical protein;protein_id=QOR58201.1;transl_table=11 MT774377.1 Genbank CDS 31806 35087 . + 0 ID=cds-QOR58202.1;Dbxref=NCBI_GP:QOR58202.1;Name=QOR58202.1;Note=gp_13154;gbkey=CDS;product=hypothetical protein;protein_id=QOR58202.1;transl_table=11 MT774377.1 Genbank CDS 35141 35239 . + 0 ID=cds-QOR58203.1;Dbxref=NCBI_GP:QOR58203.1;Name=QOR58203.1;Note=gp_13155;gbkey=CDS;product=hypothetical protein;protein_id=QOR58203.1;transl_table=11 MT774377.1 Genbank CDS 35245 35556 . + 0 ID=cds-QOR58204.1;Dbxref=NCBI_GP:QOR58204.1;Name=QOR58204.1;Note=gp_13156;gbkey=CDS;product=hypothetical protein;protein_id=QOR58204.1;transl_table=11 MT774377.1 Genbank CDS 35819 36334 . + 0 ID=cds-QOR58205.1;Dbxref=NCBI_GP:QOR58205.1;Name=QOR58205.1;Note=gp_13157%3B similar to nuclear pore complex;gbkey=CDS;product=nuclear pore complex-like protein;protein_id=QOR58205.1;transl_table=11 MT774377.1 Genbank CDS 36334 36522 . + 0 ID=cds-QOR58206.1;Dbxref=NCBI_GP:QOR58206.1;Name=QOR58206.1;Note=gp_13158;gbkey=CDS;product=hypothetical protein;protein_id=QOR58206.1;transl_table=11 MT774377.1 Genbank CDS 36631 36798 . + 0 ID=cds-QOR58207.1;Dbxref=NCBI_GP:QOR58207.1;Name=QOR58207.1;Note=gp_13159;gbkey=CDS;product=hypothetical protein;protein_id=QOR58207.1;transl_table=11 MT774377.1 Genbank CDS 36800 37159 . + 0 ID=cds-QOR58208.1;Dbxref=NCBI_GP:QOR58208.1;Name=QOR58208.1;Note=gp_13160;gbkey=CDS;product=hypothetical protein;protein_id=QOR58208.1;transl_table=11 MT774377.1 Genbank CDS 37507 38199 . + 0 ID=cds-QOR58209.1;Dbxref=NCBI_GP:QOR58209.1;Name=QOR58209.1;Note=gp_13161;gbkey=CDS;product=hypothetical protein;protein_id=QOR58209.1;transl_table=11 MT774377.1 Genbank CDS 38196 39173 . + 0 ID=cds-QOR58210.1;Dbxref=NCBI_GP:QOR58210.1;Name=QOR58210.1;Note=gp_13162;gbkey=CDS;product=hypothetical protein;protein_id=QOR58210.1;transl_table=11 MT774377.1 Genbank CDS 39127 39858 . + 0 ID=cds-QOR58211.1;Dbxref=NCBI_GP:QOR58211.1;Name=QOR58211.1;Note=gp_13163;gbkey=CDS;product=hypothetical protein;protein_id=QOR58211.1;transl_table=11 MT774377.1 Genbank CDS 39858 45275 . + 0 ID=cds-QOR58212.1;Dbxref=NCBI_GP:QOR58212.1;Name=QOR58212.1;Note=gp_13164;gbkey=CDS;product=hypothetical protein;protein_id=QOR58212.1;transl_table=11 MT774377.1 Genbank CDS 45275 47653 . + 0 ID=cds-QOR58213.1;Dbxref=NCBI_GP:QOR58213.1;Name=QOR58213.1;Note=gp_13165;gbkey=CDS;product=hypothetical protein;protein_id=QOR58213.1;transl_table=11 MT774377.1 Genbank CDS 47671 50439 . + 0 ID=cds-QOR58214.1;Dbxref=NCBI_GP:QOR58214.1;Name=QOR58214.1;Note=gp_13166;gbkey=CDS;product=hypothetical protein;protein_id=QOR58214.1;transl_table=11 MT774377.1 Genbank CDS 50443 56502 . + 0 ID=cds-QOR58215.1;Dbxref=NCBI_GP:QOR58215.1;Name=QOR58215.1;Note=gp_13167;gbkey=CDS;product=peptidase;protein_id=QOR58215.1;transl_table=11 MT774377.1 Genbank CDS 56768 69409 . + 0 ID=cds-QOR58216.1;Dbxref=NCBI_GP:QOR58216.1;Name=QOR58216.1;Note=gp_13168;gbkey=CDS;product=hypothetical protein;protein_id=QOR58216.1;transl_table=11 MT774377.1 Genbank CDS 70104 70286 . - 0 ID=cds-QOR58217.1;Dbxref=NCBI_GP:QOR58217.1;Name=QOR58217.1;Note=gp_13169;gbkey=CDS;product=hypothetical protein;protein_id=QOR58217.1;transl_table=11 MT774377.1 Genbank CDS 70358 70495 . - 0 ID=cds-QOR58218.1;Dbxref=NCBI_GP:QOR58218.1;Name=QOR58218.1;Note=gp_13170%3B Transcription regulator%2C NO-stimulated promoter binding;gbkey=CDS;product=transcription regulator;protein_id=QOR58218.1;transl_table=11 MT774377.1 Genbank CDS 70467 70760 . - 0 ID=cds-QOR58219.1;Dbxref=NCBI_GP:QOR58219.1;Name=QOR58219.1;Note=gp_13171;gbkey=CDS;product=hypothetical protein;protein_id=QOR58219.1;transl_table=11 MT774377.1 Genbank CDS 70771 71454 . - 0 ID=cds-QOR58220.1;Dbxref=NCBI_GP:QOR58220.1;Name=QOR58220.1;Note=gp_13172;gbkey=CDS;product=hypothetical protein;protein_id=QOR58220.1;transl_table=11 MT774377.1 Genbank CDS 71491 72159 . - 0 ID=cds-QOR58221.1;Dbxref=NCBI_GP:QOR58221.1;Name=QOR58221.1;Note=gp_13173;gbkey=CDS;product=deoxyuridine 5-triphosphate nucleotidohydrolase;protein_id=QOR58221.1;transl_table=11 MT774377.1 Genbank CDS 72152 72346 . - 0 ID=cds-QOR58222.1;Dbxref=NCBI_GP:QOR58222.1;Name=QOR58222.1;Note=gp_13174;gbkey=CDS;product=hypothetical protein;protein_id=QOR58222.1;transl_table=11 MT774377.1 Genbank CDS 72330 72575 . - 0 ID=cds-QOR58223.1;Dbxref=NCBI_GP:QOR58223.1;Name=QOR58223.1;Note=gp_13175;gbkey=CDS;product=hypothetical protein;protein_id=QOR58223.1;transl_table=11 MT774377.1 Genbank CDS 72566 72718 . - 0 ID=cds-QOR58224.1;Dbxref=NCBI_GP:QOR58224.1;Name=QOR58224.1;Note=gp_13176%3B PhnA Zn-ribbon%2C lysine biosynthesis protein%2C similar to a ribosomal protein;gbkey=CDS;product=lysine biosynthesis protein;protein_id=QOR58224.1;transl_table=11 MT774377.1 Genbank CDS 72709 73797 . - 0 ID=cds-QOR58225.1;Dbxref=NCBI_GP:QOR58225.1;Name=QOR58225.1;Note=gp_13177%3B Plasmid-like protein;gbkey=CDS;product=hypothetical protein;protein_id=QOR58225.1;transl_table=11 MT774377.1 Genbank CDS 73800 73904 . - 0 ID=cds-QOR58226.1;Dbxref=NCBI_GP:QOR58226.1;Name=QOR58226.1;Note=gp_13178;gbkey=CDS;product=hypothetical protein;protein_id=QOR58226.1;transl_table=11 MT774377.1 Genbank CDS 73906 74679 . - 0 ID=cds-QOR58227.1;Dbxref=NCBI_GP:QOR58227.1;Name=QOR58227.1;Note=gp_13179%3B Siphovirus Gp157%2C host-nuclease inhibitor protein Gam;gbkey=CDS;product=host-nuclease inhibitor protein;protein_id=QOR58227.1;transl_table=11 MT774377.1 Genbank CDS 74669 74839 . - 0 ID=cds-QOR58228.1;Dbxref=NCBI_GP:QOR58228.1;Name=QOR58228.1;Note=gp_13180;gbkey=CDS;product=hypothetical protein;protein_id=QOR58228.1;transl_table=11 MT774377.1 Genbank CDS 74811 75080 . - 0 ID=cds-QOR58229.1;Dbxref=NCBI_GP:QOR58229.1;Name=QOR58229.1;Note=gp_13181;gbkey=CDS;product=hypothetical protein;protein_id=QOR58229.1;transl_table=11 MT774377.1 Genbank CDS 75061 75363 . - 0 ID=cds-QOR58230.1;Dbxref=NCBI_GP:QOR58230.1;Name=QOR58230.1;Note=gp_13182;gbkey=CDS;product=hypothetical protein;protein_id=QOR58230.1;transl_table=11 MT774377.1 Genbank CDS 75356 75649 . - 0 ID=cds-QOR58231.1;Dbxref=NCBI_GP:QOR58231.1;Name=QOR58231.1;Note=gp_13183;gbkey=CDS;product=hypothetical protein;protein_id=QOR58231.1;transl_table=11 MT774377.1 Genbank CDS 75636 75971 . - 0 ID=cds-QOR58232.1;Dbxref=NCBI_GP:QOR58232.1;Name=QOR58232.1;Note=gp_13184;gbkey=CDS;product=DNA endonuclease;protein_id=QOR58232.1;transl_table=11 MT774377.1 Genbank CDS 75946 76236 . - 0 ID=cds-QOR58233.1;Dbxref=NCBI_GP:QOR58233.1;Name=QOR58233.1;Note=gp_13185;gbkey=CDS;product=hypothetical protein;protein_id=QOR58233.1;transl_table=11 MT774377.1 Genbank CDS 76591 76944 . - 0 ID=cds-QOR58234.1;Dbxref=NCBI_GP:QOR58234.1;Name=QOR58234.1;Note=gp_13186%3B similar to virion egress protein;gbkey=CDS;product=virion egress protein-like protein;protein_id=QOR58234.1;transl_table=11 MT774377.1 Genbank CDS 76901 78166 . - 0 ID=cds-QOR58235.1;Dbxref=NCBI_GP:QOR58235.1;Name=QOR58235.1;Note=gp_13187;gbkey=CDS;product=DNA ligase;protein_id=QOR58235.1;transl_table=11 MT774377.1 Genbank CDS 78163 78645 . - 0 ID=cds-QOR58236.1;Dbxref=NCBI_GP:QOR58236.1;Name=QOR58236.1;Note=gp_13188;gbkey=CDS;product=hypothetical protein;protein_id=QOR58236.1;transl_table=11 MT774377.1 Genbank CDS 78617 79156 . - 0 ID=cds-QOR58237.1;Dbxref=NCBI_GP:QOR58237.1;Name=QOR58237.1;Note=gp_13189;gbkey=CDS;product=hypothetical protein;protein_id=QOR58237.1;transl_table=11 MT774377.1 Genbank CDS 79149 80282 . - 0 ID=cds-QOR58238.1;Dbxref=NCBI_GP:QOR58238.1;Name=QOR58238.1;Note=gp_13190;gbkey=CDS;product=DNA primase;protein_id=QOR58238.1;transl_table=11 MT774377.1 Genbank CDS 80356 81396 . - 0 ID=cds-QOR58239.1;Dbxref=NCBI_GP:QOR58239.1;Name=QOR58239.1;Note=gp_13191;gbkey=CDS;product=hypothetical protein;protein_id=QOR58239.1;transl_table=11 MT774377.1 Genbank CDS 81568 82323 . - 0 ID=cds-QOR58240.1;Dbxref=NCBI_GP:QOR58240.1;Name=QOR58240.1;Note=gp_13192;gbkey=CDS;product=recombination endonuclease;protein_id=QOR58240.1;transl_table=11 MT774377.1 Genbank CDS 82446 83360 . - 0 ID=cds-QOR58241.1;Dbxref=NCBI_GP:QOR58241.1;Name=QOR58241.1;Note=gp_13193%3B recombination protein Bet%2C RecT recombinase;gbkey=CDS;product=recombination protein;protein_id=QOR58241.1;transl_table=11 MT774377.1 Genbank CDS 83434 84900 . - 0 ID=cds-QOR58242.1;Dbxref=NCBI_GP:QOR58242.1;Name=QOR58242.1;Note=gp_13194%3B putative DNA repair protein%2C helicase;gbkey=CDS;product=putative DNA repair protein;protein_id=QOR58242.1;transl_table=11 MT774377.1 Genbank CDS 84902 87097 . - 0 ID=cds-QOR58243.1;Dbxref=NCBI_GP:QOR58243.1;Name=QOR58243.1;Note=gp_13195;gbkey=CDS;product=DNA polymerase;protein_id=QOR58243.1;transl_table=11 MT774377.1 Genbank CDS 87111 88568 . - 0 ID=cds-QOR58244.1;Dbxref=NCBI_GP:QOR58244.1;Name=QOR58244.1;Note=gp_13196%3B Exodeoxyribonuclease%2C DNA helicase;gbkey=CDS;product=DNA helicase;protein_id=QOR58244.1;transl_table=11 MT774377.1 Genbank CDS 88558 88857 . - 0 ID=cds-QOR58245.1;Dbxref=NCBI_GP:QOR58245.1;Name=QOR58245.1;Note=gp_13197;gbkey=CDS;product=hypothetical protein;protein_id=QOR58245.1;transl_table=11 MT774377.1 Genbank CDS 88928 89179 . - 0 ID=cds-QOR58246.1;Dbxref=NCBI_GP:QOR58246.1;Name=QOR58246.1;Note=gp_13198;gbkey=CDS;product=hypothetical protein;protein_id=QOR58246.1;transl_table=11 MT774377.1 Genbank CDS 89181 89492 . - 0 ID=cds-QOR58247.1;Dbxref=NCBI_GP:QOR58247.1;Name=QOR58247.1;Note=gp_13199%3B Zn ribbon domain of transcription factor%2C similar to a ribosomal protein;gbkey=CDS;product=ribosomal protein-like protein;protein_id=QOR58247.1;transl_table=11 MT774377.1 Genbank CDS 89476 89622 . - 0 ID=cds-QOR58248.1;Dbxref=NCBI_GP:QOR58248.1;Name=QOR58248.1;Note=gp_13200;gbkey=CDS;product=hypothetical protein;protein_id=QOR58248.1;transl_table=11 MT774377.1 Genbank CDS 89645 89965 . - 0 ID=cds-QOR58249.1;Dbxref=NCBI_GP:QOR58249.1;Name=QOR58249.1;Note=gp_13201;gbkey=CDS;product=hypothetical protein;protein_id=QOR58249.1;transl_table=11 MT774377.1 Genbank CDS 90363 90935 . - 0 ID=cds-QOR58250.1;Dbxref=NCBI_GP:QOR58250.1;Name=QOR58250.1;Note=gp_13202;gbkey=CDS;product=hypothetical protein;protein_id=QOR58250.1;transl_table=11 MT774377.1 Genbank CDS 91075 91461 . - 0 ID=cds-QOR58251.1;Dbxref=NCBI_GP:QOR58251.1;Name=QOR58251.1;Note=gp_13203;gbkey=CDS;product=putative glycoprotein;protein_id=QOR58251.1;transl_table=11 MT774377.1 Genbank CDS 91478 91630 . - 0 ID=cds-QOR58252.1;Dbxref=NCBI_GP:QOR58252.1;Name=QOR58252.1;Note=gp_13204;gbkey=CDS;product=hypothetical protein;protein_id=QOR58252.1;transl_table=11 MT774377.1 Genbank CDS 91703 92647 . - 0 ID=cds-QOR58253.1;Dbxref=NCBI_GP:QOR58253.1;Name=QOR58253.1;Note=gp_13205;gbkey=CDS;product=putative outer capsid protein;protein_id=QOR58253.1;transl_table=11 MT774377.1 Genbank CDS 92882 93061 . - 0 ID=cds-QOR58254.1;Dbxref=NCBI_GP:QOR58254.1;Name=QOR58254.1;Note=gp_13206;gbkey=CDS;product=hypothetical protein;protein_id=QOR58254.1;transl_table=11 ###