##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM1516128v1 #!genome-build-accession NCBI_Assembly:GCA_015161285.1 ##sequence-region MT774410.1 1 98667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2772094 MT774410.1 Genbank region 1 98667 . + . ID=MT774410.1:1..98667;Dbxref=taxon:2772094;collected-by=Shkoporov_etal;collection-date=2015;country=Ireland;gbkey=Src;genome=genomic;identified-by=A. Shkoporov %26 S. Stockdale;isolation-source=pig feces;mol_type=genomic DNA MT774410.1 Genbank tRNA 1 75 . - . ID=rna-MT774410.1:1..75;gbkey=tRNA;product=tRNA-Met MT774410.1 Genbank exon 1 75 . - . ID=exon-MT774410.1:1..75-1;Parent=rna-MT774410.1:1..75;gbkey=tRNA;product=tRNA-Met MT774410.1 Genbank tmRNA 193 562 . - . ID=rna-MT774410.1:193..562;gbkey=tmRNA;product=transfer-messenger RNA%2C SsrA MT774410.1 Genbank exon 193 562 . - . ID=exon-MT774410.1:193..562-1;Parent=rna-MT774410.1:193..562;gbkey=tmRNA;product=transfer-messenger RNA%2C SsrA MT774410.1 Genbank CDS 981 1436 . - 0 ID=cds-QOR57785.1;Dbxref=NCBI_GP:QOR57785.1;Name=QOR57785.1;Note=gp_91109;gbkey=CDS;product=hypothetical protein;protein_id=QOR57785.1;transl_table=16 MT774410.1 Genbank CDS 1467 1604 . - 0 ID=cds-QOR57786.1;Dbxref=NCBI_GP:QOR57786.1;Name=QOR57786.1;Note=gp_91110;gbkey=CDS;product=hypothetical protein;protein_id=QOR57786.1;transl_table=16 MT774410.1 Genbank CDS 1588 2109 . - 0 ID=cds-QOR57787.1;Dbxref=NCBI_GP:QOR57787.1;Name=QOR57787.1;Note=gp_91111;gbkey=CDS;product=hypothetical protein;protein_id=QOR57787.1;transl_table=16 MT774410.1 Genbank CDS 2106 2585 . - 0 ID=cds-QOR57788.1;Dbxref=NCBI_GP:QOR57788.1;Name=QOR57788.1;Note=gp_91112;gbkey=CDS;product=hypothetical protein;protein_id=QOR57788.1;transl_table=16 MT774410.1 Genbank CDS 3105 3626 . - 0 ID=cds-QOR57789.1;Dbxref=NCBI_GP:QOR57789.1;Name=QOR57789.1;Note=gp_91113;gbkey=CDS;product=hypothetical protein;protein_id=QOR57789.1;transl_table=16 MT774410.1 Genbank CDS 3623 4003 . - 0 ID=cds-QOR57790.1;Dbxref=NCBI_GP:QOR57790.1;Name=QOR57790.1;Note=gp_91114;gbkey=CDS;product=hypothetical protein;protein_id=QOR57790.1;transl_table=16 MT774410.1 Genbank CDS 4264 4680 . - 0 ID=cds-QOR57791.1;Dbxref=NCBI_GP:QOR57791.1;Name=QOR57791.1;Note=gp_91115;gbkey=CDS;product=hypothetical protein;protein_id=QOR57791.1;transl_table=16 MT774410.1 Genbank CDS 5588 5908 . - 0 ID=cds-QOR57792.1;Dbxref=NCBI_GP:QOR57792.1;Name=QOR57792.1;Note=gp_91116;gbkey=CDS;product=hypothetical protein;protein_id=QOR57792.1;transl_table=16 MT774410.1 Genbank CDS 5915 6067 . - 0 ID=cds-QOR57793.1;Dbxref=NCBI_GP:QOR57793.1;Name=QOR57793.1;Note=gp_91117;gbkey=CDS;product=hypothetical protein;protein_id=QOR57793.1;transl_table=16 MT774410.1 Genbank CDS 7581 8426 . - 0 ID=cds-QOR57794.1;Dbxref=NCBI_GP:QOR57794.1;Name=QOR57794.1;Note=gp_91118;gbkey=CDS;product=hypothetical protein;protein_id=QOR57794.1;transl_table=16 MT774410.1 Genbank CDS 9220 9639 . - 0 ID=cds-QOR57795.1;Dbxref=NCBI_GP:QOR57795.1;Name=QOR57795.1;Note=gp_91119;gbkey=CDS;product=hypothetical protein;protein_id=QOR57795.1;transl_table=16 MT774410.1 Genbank CDS 9693 10196 . - 0 ID=cds-QOR57796.1;Dbxref=NCBI_GP:QOR57796.1;Name=QOR57796.1;Note=gp_91120;gbkey=CDS;product=hypothetical protein;protein_id=QOR57796.1;transl_table=16 MT774410.1 Genbank CDS 10193 10597 . - 0 ID=cds-QOR57797.1;Dbxref=NCBI_GP:QOR57797.1;Name=QOR57797.1;Note=gp_91121;gbkey=CDS;product=hypothetical protein;protein_id=QOR57797.1;transl_table=16 MT774410.1 Genbank CDS 10771 11157 . + 0 ID=cds-QOR57798.1;Dbxref=NCBI_GP:QOR57798.1;Name=QOR57798.1;Note=gp_91122;gbkey=CDS;product=hypothetical protein;protein_id=QOR57798.1;transl_table=16 MT774410.1 Genbank CDS 11157 11570 . + 0 ID=cds-QOR57799.1;Dbxref=NCBI_GP:QOR57799.1;Name=QOR57799.1;Note=gp_91123;gbkey=CDS;product=chaperonin;protein_id=QOR57799.1;transl_table=16 MT774410.1 Genbank CDS 11751 12134 . + 0 ID=cds-QOR57800.1;Dbxref=NCBI_GP:QOR57800.1;Name=QOR57800.1;Note=gp_91124;gbkey=CDS;product=hypothetical protein;protein_id=QOR57800.1;transl_table=16 MT774410.1 Genbank CDS 12169 12525 . + 0 ID=cds-QOR57801.1;Dbxref=NCBI_GP:QOR57801.1;Name=QOR57801.1;Note=gp_91125;gbkey=CDS;product=hypothetical protein;protein_id=QOR57801.1;transl_table=16 MT774410.1 Genbank tRNA 12606 12679 . + . ID=rna-MT774410.1:12606..12679;gbkey=tRNA;product=tRNA-Gln MT774410.1 Genbank exon 12606 12679 . + . ID=exon-MT774410.1:12606..12679-1;Parent=rna-MT774410.1:12606..12679;gbkey=tRNA;product=tRNA-Gln MT774410.1 Genbank CDS 12714 13283 . + 0 ID=cds-QOR57802.1;Dbxref=NCBI_GP:QOR57802.1;Name=QOR57802.1;Note=gp_91127%3B Dut dUTPase;gbkey=CDS;product=dUTPase;protein_id=QOR57802.1;transl_table=16 MT774410.1 Genbank CDS 13412 14188 . + 0 ID=cds-QOR57803.1;Dbxref=NCBI_GP:QOR57803.1;Name=QOR57803.1;Note=gp_91128;gbkey=CDS;product=hypothetical protein;protein_id=QOR57803.1;transl_table=16 MT774410.1 Genbank CDS 14193 15986 . + 0 ID=cds-QOR57804.1;Dbxref=NCBI_GP:QOR57804.1;Name=QOR57804.1;Note=gp_91129;gbkey=CDS;product=hypothetical protein;protein_id=QOR57804.1;transl_table=16 MT774410.1 Genbank CDS 16180 22716 . + 0 ID=cds-QOR57805.1;Dbxref=NCBI_GP:QOR57805.1;Name=QOR57805.1;Note=gp_91130;gbkey=CDS;product=hypothetical protein;protein_id=QOR57805.1;transl_table=16 MT774410.1 Genbank CDS 22713 24278 . + 0 ID=cds-QOR57806.1;Dbxref=NCBI_GP:QOR57806.1;Name=QOR57806.1;Note=gp_91131;gbkey=CDS;product=hypothetical protein;protein_id=QOR57806.1;transl_table=16 MT774410.1 Genbank CDS 24495 25394 . + 0 ID=cds-QOR57807.1;Dbxref=NCBI_GP:QOR57807.1;Name=QOR57807.1;Note=gp_91132;gbkey=CDS;product=hypothetical protein;protein_id=QOR57807.1;transl_table=16 MT774410.1 Genbank CDS 25412 25753 . + 0 ID=cds-QOR57808.1;Dbxref=NCBI_GP:QOR57808.1;Name=QOR57808.1;Note=gp_91133;gbkey=CDS;product=hypothetical protein;protein_id=QOR57808.1;transl_table=16 MT774410.1 Genbank CDS 25770 26120 . + 0 ID=cds-QOR57809.1;Dbxref=NCBI_GP:QOR57809.1;Name=QOR57809.1;Note=gp_91134;gbkey=CDS;product=hypothetical protein;protein_id=QOR57809.1;transl_table=16 MT774410.1 Genbank CDS 26183 26704 . + 0 ID=cds-QOR57810.1;Dbxref=NCBI_GP:QOR57810.1;Name=QOR57810.1;Note=gp_91135;gbkey=CDS;product=hypothetical protein;protein_id=QOR57810.1;transl_table=16 MT774410.1 Genbank CDS 26682 27062 . + 0 ID=cds-QOR57811.1;Dbxref=NCBI_GP:QOR57811.1;Name=QOR57811.1;Note=gp_91136;gbkey=CDS;product=hypothetical protein;protein_id=QOR57811.1;transl_table=16 MT774410.1 Genbank CDS 27067 27576 . + 0 ID=cds-QOR57812.1;Dbxref=NCBI_GP:QOR57812.1;Name=QOR57812.1;Note=gp_91137;gbkey=CDS;product=hypothetical protein;protein_id=QOR57812.1;transl_table=16 MT774410.1 Genbank CDS 27576 28154 . + 0 ID=cds-QOR57813.1;Dbxref=NCBI_GP:QOR57813.1;Name=QOR57813.1;Note=gp_91138;gbkey=CDS;product=putative endolysin;protein_id=QOR57813.1;transl_table=16 MT774410.1 Genbank CDS 28156 30213 . + 0 ID=cds-QOR57814.1;Dbxref=NCBI_GP:QOR57814.1;Name=QOR57814.1;Note=gp_91139;gbkey=CDS;product=terminase;protein_id=QOR57814.1;transl_table=16 MT774410.1 Genbank CDS 30216 32702 . + 0 ID=cds-QOR57815.1;Dbxref=NCBI_GP:QOR57815.1;Name=QOR57815.1;Note=gp_91140;gbkey=CDS;product=portal protein;protein_id=QOR57815.1;transl_table=16 MT774410.1 Genbank CDS 32699 33676 . + 0 ID=cds-QOR57816.1;Dbxref=NCBI_GP:QOR57816.1;Name=QOR57816.1;Note=gp_91141;gbkey=CDS;product=hypothetical protein;protein_id=QOR57816.1;transl_table=16 MT774410.1 Genbank CDS 33695 34279 . + 0 ID=cds-QOR57817.1;Dbxref=NCBI_GP:QOR57817.1;Name=QOR57817.1;Note=gp_91142;gbkey=CDS;product=hypothetical protein;protein_id=QOR57817.1;transl_table=16 MT774410.1 Genbank CDS 34269 34388 . + 0 ID=cds-QOR57818.1;Dbxref=NCBI_GP:QOR57818.1;Name=QOR57818.1;Note=gp_91143;gbkey=CDS;product=hypothetical protein;protein_id=QOR57818.1;transl_table=16 MT774410.1 Genbank CDS 34430 35596 . + 0 ID=cds-QOR57819.1;Dbxref=NCBI_GP:QOR57819.1;Name=QOR57819.1;Note=gp_91144%3B Regulatory protein RecX;gbkey=CDS;product=regulatory protein;protein_id=QOR57819.1;transl_table=16 MT774410.1 Genbank CDS 35622 37145 . + 0 ID=cds-QOR57820.1;Dbxref=NCBI_GP:QOR57820.1;Name=QOR57820.1;Note=gp_91145;gbkey=CDS;product=major capsid protein;protein_id=QOR57820.1;transl_table=16 MT774410.1 Genbank CDS 37224 37976 . + 0 ID=cds-QOR57821.1;Dbxref=NCBI_GP:QOR57821.1;Name=QOR57821.1;Note=gp_91146;gbkey=CDS;product=RecA protein;protein_id=QOR57821.1;transl_table=16 MT774410.1 Genbank CDS 38000 38884 . + 0 ID=cds-QOR57822.1;Dbxref=NCBI_GP:QOR57822.1;Name=QOR57822.1;Note=gp_91147;gbkey=CDS;product=hypothetical protein;protein_id=QOR57822.1;transl_table=16 MT774410.1 Genbank CDS 38881 39702 . + 0 ID=cds-QOR57823.1;Dbxref=NCBI_GP:QOR57823.1;Name=QOR57823.1;Note=gp_91148;gbkey=CDS;product=hypothetical protein;protein_id=QOR57823.1;transl_table=16 MT774410.1 Genbank CDS 39705 40391 . + 0 ID=cds-QOR57824.1;Dbxref=NCBI_GP:QOR57824.1;Name=QOR57824.1;Note=gp_91149;gbkey=CDS;product=hypothetical protein;protein_id=QOR57824.1;transl_table=16 MT774410.1 Genbank CDS 40470 41486 . + 0 ID=cds-QOR57825.1;Dbxref=NCBI_GP:QOR57825.1;Name=QOR57825.1;Note=gp_91150;gbkey=CDS;product=hypothetical protein;protein_id=QOR57825.1;transl_table=16 MT774410.1 Genbank CDS 41489 42202 . + 0 ID=cds-QOR57826.1;Dbxref=NCBI_GP:QOR57826.1;Name=QOR57826.1;Note=gp_91151;gbkey=CDS;product=hypothetical protein;protein_id=QOR57826.1;transl_table=16 MT774410.1 Genbank CDS 42205 42480 . + 0 ID=cds-QOR57827.1;Dbxref=NCBI_GP:QOR57827.1;Name=QOR57827.1;Note=gp_91152;gbkey=CDS;product=hypothetical protein;protein_id=QOR57827.1;transl_table=16 MT774410.1 Genbank CDS 42431 43090 . + 0 ID=cds-QOR57828.1;Dbxref=NCBI_GP:QOR57828.1;Name=QOR57828.1;Note=gp_91153;gbkey=CDS;product=hypothetical protein;protein_id=QOR57828.1;transl_table=16 MT774410.1 Genbank CDS 43092 43820 . + 0 ID=cds-QOR57829.1;Dbxref=NCBI_GP:QOR57829.1;Name=QOR57829.1;Note=gp_91154;gbkey=CDS;product=hypothetical protein;protein_id=QOR57829.1;transl_table=16 MT774410.1 Genbank CDS 43820 44257 . + 0 ID=cds-QOR57830.1;Dbxref=NCBI_GP:QOR57830.1;Name=QOR57830.1;Note=gp_91155;gbkey=CDS;product=topoisomerase;protein_id=QOR57830.1;transl_table=16 MT774410.1 Genbank CDS 44277 45155 . + 0 ID=cds-QOR57831.1;Dbxref=NCBI_GP:QOR57831.1;Name=QOR57831.1;Note=gp_91156;gbkey=CDS;product=hypothetical protein;protein_id=QOR57831.1;transl_table=16 MT774410.1 Genbank CDS 45145 49890 . + 0 ID=cds-QOR57832.1;Dbxref=NCBI_GP:QOR57832.1;Name=QOR57832.1;Note=gp_91157;gbkey=CDS;product=hypothetical protein;protein_id=QOR57832.1;transl_table=16 MT774410.1 Genbank CDS 49887 50696 . + 0 ID=cds-QOR57833.1;Dbxref=NCBI_GP:QOR57833.1;Name=QOR57833.1;Note=gp_91158;gbkey=CDS;product=hypothetical protein;protein_id=QOR57833.1;transl_table=16 MT774410.1 Genbank CDS 50683 51753 . + 0 ID=cds-QOR57834.1;Dbxref=NCBI_GP:QOR57834.1;Name=QOR57834.1;Note=gp_91159;gbkey=CDS;product=hypothetical protein;protein_id=QOR57834.1;transl_table=16 MT774410.1 Genbank CDS 51757 53232 . + 0 ID=cds-QOR57835.1;Dbxref=NCBI_GP:QOR57835.1;Name=QOR57835.1;Note=gp_91160;gbkey=CDS;product=hypothetical protein;protein_id=QOR57835.1;transl_table=16 MT774410.1 Genbank CDS 53236 72396 . + 0 ID=cds-QOR57836.1;Dbxref=NCBI_GP:QOR57836.1;Name=QOR57836.1;Note=gp_91161;gbkey=CDS;product=hypothetical protein;protein_id=QOR57836.1;transl_table=16 MT774410.1 Genbank CDS 72402 79247 . + 0 ID=cds-QOR57837.1;Dbxref=NCBI_GP:QOR57837.1;Name=QOR57837.1;Note=gp_91162;gbkey=CDS;product=hypothetical protein;protein_id=QOR57837.1;transl_table=16 MT774410.1 Genbank CDS 79302 79784 . - 0 ID=cds-QOR57838.1;Dbxref=NCBI_GP:QOR57838.1;Name=QOR57838.1;Note=gp_91163;gbkey=CDS;product=hypothetical protein;protein_id=QOR57838.1;transl_table=16 MT774410.1 Genbank CDS 79781 80770 . - 0 ID=cds-QOR57839.1;Dbxref=NCBI_GP:QOR57839.1;Name=QOR57839.1;Note=gp_91164;gbkey=CDS;product=exonuclease;protein_id=QOR57839.1;transl_table=16 MT774410.1 Genbank CDS 80767 81546 . - 0 ID=cds-QOR57840.1;Dbxref=NCBI_GP:QOR57840.1;Name=QOR57840.1;Note=gp_91165%3B proteasome (non-ATPase regulatory subunit);gbkey=CDS;product=non-ATPase regulatory subunit;protein_id=QOR57840.1;transl_table=16 MT774410.1 Genbank CDS 81533 81928 . - 0 ID=cds-QOR57841.1;Dbxref=NCBI_GP:QOR57841.1;Name=QOR57841.1;Note=gp_91166;gbkey=CDS;product=hypothetical protein;protein_id=QOR57841.1;transl_table=16 MT774410.1 Genbank CDS 81925 82914 . - 0 ID=cds-QOR57842.1;Dbxref=NCBI_GP:QOR57842.1;Name=QOR57842.1;Note=gp_91167;gbkey=CDS;product=DNA primase/helicase;protein_id=QOR57842.1;transl_table=16 MT774410.1 Genbank CDS 83132 83740 . - 0 ID=cds-QOR57843.1;Dbxref=NCBI_GP:QOR57843.1;Name=QOR57843.1;Note=gp_91168;gbkey=CDS;product=hypothetical protein;protein_id=QOR57843.1;transl_table=16 MT774410.1 Genbank CDS 83757 84509 . - 0 ID=cds-QOR57844.1;Dbxref=NCBI_GP:QOR57844.1;Name=QOR57844.1;Note=gp_91169%3B P-loop/AAA domain/RecA protein;gbkey=CDS;product=RecA protein;protein_id=QOR57844.1;transl_table=16 MT774410.1 Genbank CDS 84512 84949 . - 0 ID=cds-QOR57845.1;Dbxref=NCBI_GP:QOR57845.1;Name=QOR57845.1;Note=gp_91170;gbkey=CDS;product=hypothetical protein;protein_id=QOR57845.1;transl_table=16 MT774410.1 Genbank CDS 84989 85882 . - 0 ID=cds-QOR57846.1;Dbxref=NCBI_GP:QOR57846.1;Name=QOR57846.1;Note=gp_91171%3B DNA helicase%2C ATPase;gbkey=CDS;product=DNA helicase;protein_id=QOR57846.1;transl_table=16 MT774410.1 Genbank CDS 85896 86456 . - 0 ID=cds-QOR57847.1;Dbxref=NCBI_GP:QOR57847.1;Name=QOR57847.1;Note=gp_91172%3B similar to a segregation and condensation complex;gbkey=CDS;product=hypothetical protein;protein_id=QOR57847.1;transl_table=16 MT774410.1 Genbank CDS 86484 88373 . - 0 ID=cds-QOR57848.1;Dbxref=NCBI_GP:QOR57848.1;Name=QOR57848.1;Note=gp_91173;gbkey=CDS;product=DNA polymerase;protein_id=QOR57848.1;transl_table=16 MT774410.1 Genbank CDS 88458 89162 . - 0 ID=cds-QOR57849.1;Dbxref=NCBI_GP:QOR57849.1;Name=QOR57849.1;Note=gp_91174;gbkey=CDS;product=hypothetical protein;protein_id=QOR57849.1;transl_table=16 MT774410.1 Genbank CDS 89186 89827 . - 0 ID=cds-QOR57850.1;Dbxref=NCBI_GP:QOR57850.1;Name=QOR57850.1;Note=gp_91175;gbkey=CDS;product=hypothetical protein;protein_id=QOR57850.1;transl_table=16 MT774410.1 Genbank CDS 89947 90492 . - 0 ID=cds-QOR57851.1;Dbxref=NCBI_GP:QOR57851.1;Name=QOR57851.1;Note=gp_91176;gbkey=CDS;product=hypothetical protein;protein_id=QOR57851.1;transl_table=16 MT774410.1 Genbank CDS 90811 91404 . - 0 ID=cds-QOR57852.1;Dbxref=NCBI_GP:QOR57852.1;Name=QOR57852.1;Note=gp_91177;gbkey=CDS;product=hypothetical protein;protein_id=QOR57852.1;transl_table=16 MT774410.1 Genbank CDS 91410 92033 . - 0 ID=cds-QOR57853.1;Dbxref=NCBI_GP:QOR57853.1;Name=QOR57853.1;Note=gp_91178;gbkey=CDS;product=hypothetical protein;protein_id=QOR57853.1;transl_table=16 MT774410.1 Genbank CDS 94257 94709 . - 0 ID=cds-QOR57854.1;Dbxref=NCBI_GP:QOR57854.1;Name=QOR57854.1;Note=gp_91179;gbkey=CDS;product=hypothetical protein;protein_id=QOR57854.1;transl_table=16 MT774410.1 Genbank CDS 94808 96220 . - 0 ID=cds-QOR57855.1;Dbxref=NCBI_GP:QOR57855.1;Name=QOR57855.1;Note=gp_91180;gbkey=CDS;product=hypothetical protein;protein_id=QOR57855.1;transl_table=16 MT774410.1 Genbank CDS 96288 96716 . - 0 ID=cds-QOR57856.1;Dbxref=NCBI_GP:QOR57856.1;Name=QOR57856.1;Note=gp_91181;gbkey=CDS;product=hypothetical protein;protein_id=QOR57856.1;transl_table=16 MT774410.1 Genbank CDS 96713 97276 . - 0 ID=cds-QOR57857.1;Dbxref=NCBI_GP:QOR57857.1;Name=QOR57857.1;Note=gp_91182;gbkey=CDS;product=RNA polymerase sigma-W factor;protein_id=QOR57857.1;transl_table=16 MT774410.1 Genbank CDS 97215 98339 . - 0 ID=cds-QOR57858.1;Dbxref=NCBI_GP:QOR57858.1;Name=QOR57858.1;Note=gp_91183;gbkey=CDS;product=hypothetical protein;protein_id=QOR57858.1;transl_table=16 MT774410.1 Genbank tRNA 98367 98453 . - . ID=rna-MT774410.1:98367..98453;gbkey=tRNA;product=tRNA-Leu MT774410.1 Genbank exon 98367 98453 . - . ID=exon-MT774410.1:98367..98453-1;Parent=rna-MT774410.1:98367..98453;gbkey=tRNA;product=tRNA-Leu MT774410.1 Genbank tRNA 98527 98601 . - . ID=rna-MT774410.1:98527..98601;gbkey=tRNA;product=tRNA-Met MT774410.1 Genbank exon 98527 98601 . - . ID=exon-MT774410.1:98527..98601-1;Parent=rna-MT774410.1:98527..98601;gbkey=tRNA;product=tRNA-Met ###