locus-tag class description RGRSB_0002 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RGRSB_0002 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RGRSB_0002 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RGRSB_0002 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RGRSB_0003 PF01195 Peptidyl-tRNA hydrolase RGRSB_0008 PF02541 Ppx/GppA phosphatase family RGRSB_0009 PF01040 UbiA prenyltransferase family RGRSB_0015 PF10431 C-terminal, D2-small domain, of ClpB protein RGRSB_0015 PF00004 ATPase family associated with various cellular activities (AAA) RGRSB_0015 PF02861 Clp amino terminal domain, pathogenicity island component RGRSB_0015 PF17871 AAA lid domain RGRSB_0015 PF07724 AAA domain (Cdc48 subfamily) RGRSB_0016 PF00814 Glycoprotease family RGRSB_0016 PF00583 Acetyltransferase (GNAT) family RGRSB_0017 PF01926 50S ribosome-binding GTPase RGRSB_0017 PF12631 MnmE helical domain RGRSB_0017 PF10396 GTP-binding protein TrmE N-terminus RGRSB_0018 PF00271 Helicase conserved C-terminal domain RGRSB_0018 PF08148 DSHCT (NUC185) domain RGRSB_0018 PF00270 DEAD/DEAH box helicase RGRSB_0019 PF00578 AhpC/TSA family RGRSB_0024 PF02571 Precorrin-6x reductase CbiJ/CobK RGRSB_0031 PF01300 Telomere recombination RGRSB_0034 PF00756 Putative esterase RGRSB_0037 PF00210 Ferritin-like domain RGRSB_0038 PF07683 Cobalamin synthesis protein cobW C-terminal domain RGRSB_0038 PF02492 CobW/HypB/UreG, nucleotide-binding domain RGRSB_0042 PF00462 Glutaredoxin RGRSB_0043 PF00082 Subtilase family RGRSB_0049 PF11805 Protein of unknown function (DUF3326) RGRSB_0052 PF00664 ABC transporter transmembrane region RGRSB_0052 PF00005 ABC transporter RGRSB_0054 PF02272 DHHA1 domain RGRSB_0054 PF10141 Single-strand DNA-specific exonuclease, C terminal domain RGRSB_0054 PF01368 DHH family RGRSB_0054 PF17768 RecJ OB domain RGRSB_0057 PF00117 Glutamine amidotransferase class-I RGRSB_0058 PF01494 FAD binding domain RGRSB_0059 PF12697 Alpha/beta hydrolase family RGRSB_0060 PF00583 Acetyltransferase (GNAT) family RGRSB_0063 PF05175 Methyltransferase small domain RGRSB_0064 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RGRSB_0069 PF00294 pfkB family carbohydrate kinase RGRSB_0070 PF00595 PDZ domain RGRSB_0070 PF03572 Peptidase family S41 RGRSB_0072 PF12327 FtsZ family, C-terminal domain RGRSB_0072 PF00091 Tubulin/FtsZ family, GTPase domain RGRSB_0073 PF01029 NusB family RGRSB_0073 PF01189 16S rRNA methyltransferase RsmB/F RGRSB_0075 PF01544 CorA-like Mg2+ transporter protein RGRSB_0076 PF17757 UvrB interaction domain RGRSB_0076 PF02559 CarD-like/TRCF domain RGRSB_0076 PF00270 DEAD/DEAH box helicase RGRSB_0076 PF00271 Helicase conserved C-terminal domain RGRSB_0076 PF03461 TRCF domain RGRSB_0082 PF00361 Proton-conducting membrane transporter RGRSB_0083 PF02361 Cobalt transport protein RGRSB_0084 PF00005 ABC transporter RGRSB_0091 PF03706 Lysylphosphatidylglycerol synthase TM region RGRSB_0092 PF00011 Hsp20/alpha crystallin family RGRSB_0093 PF00361 Proton-conducting membrane transporter RGRSB_0093 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus RGRSB_0093 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RGRSB_0095 PF07687 Peptidase dimerisation domain RGRSB_0095 PF01546 Peptidase family M20/M25/M40 RGRSB_0101 PF01740 STAS domain RGRSB_0102 PF00636 Ribonuclease III domain RGRSB_0103 PF04472 Cell division protein SepF RGRSB_0104 PF00916 Sulfate permease family RGRSB_0104 PF01740 STAS domain RGRSB_0105 PF04055 Radical SAM superfamily RGRSB_0105 PF06969 HemN C-terminal domain RGRSB_0107 PF02577 Bifunctional nuclease RGRSB_0109 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RGRSB_0112 PF00171 Aldehyde dehydrogenase family RGRSB_0114 PF00180 Isocitrate/isopropylmalate dehydrogenase RGRSB_0116 PF00128 Alpha amylase, catalytic domain RGRSB_0117 PF02254 TrkA-N domain RGRSB_0117 PF02080 TrkA-C domain RGRSB_0118 PF02386 Cation transport protein RGRSB_0119 PF04122 Putative cell wall binding repeat 2 RGRSB_0119 PF08486 Stage II sporulation protein RGRSB_0124 PF02597 ThiS family RGRSB_0125 PF00291 Pyridoxal-phosphate dependent enzyme RGRSB_0126 PF02684 Lipid-A-disaccharide synthetase RGRSB_0128 PF02779 Transketolase, pyrimidine binding domain RGRSB_0128 PF02780 Transketolase, C-terminal domain RGRSB_0128 PF00456 Transketolase, thiamine diphosphate binding domain RGRSB_0130 PF00795 Carbon-nitrogen hydrolase RGRSB_0130 PF00535 Glycosyl transferase family 2 RGRSB_0132 PF03190 Protein of unknown function, DUF255 RGRSB_0135 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RGRSB_0135 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RGRSB_0136 PF01488 Shikimate / quinate 5-dehydrogenase RGRSB_0138 PF03023 Lipid II flippase MurJ RGRSB_0144 PF00176 SNF2 family N-terminal domain RGRSB_0144 PF00271 Helicase conserved C-terminal domain RGRSB_0144 PF12419 SNF2 Helicase protein RGRSB_0146 PF05221 S-adenosyl-L-homocysteine hydrolase RGRSB_0146 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RGRSB_0147 PF06055 Exopolysaccharide synthesis, ExoD RGRSB_0150 PF00355 Rieske [2Fe-2S] domain RGRSB_0151 PF01425 Amidase RGRSB_0152 PF00877 NlpC/P60 family RGRSB_0152 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain RGRSB_0154 PF01300 Telomere recombination RGRSB_0154 PF03481 Putative GTP-binding controlling metal-binding RGRSB_0157 PF01479 S4 domain RGRSB_0157 PF00579 tRNA synthetases class I (W and Y) RGRSB_0158 PF02219 Methylenetetrahydrofolate reductase RGRSB_0159 PF00579 tRNA synthetases class I (W and Y) RGRSB_0167 PF00194 Eukaryotic-type carbonic anhydrase RGRSB_0170 PF00478 IMP dehydrogenase / GMP reductase domain RGRSB_0170 PF00571 CBS domain RGRSB_0172 PF12848 ABC transporter RGRSB_0172 PF00005 ABC transporter RGRSB_0172 PF16326 ABC transporter C-terminal domain RGRSB_0174 PF00696 Amino acid kinase family RGRSB_0175 PF01266 FAD dependent oxidoreductase RGRSB_0175 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RGRSB_0176 PF00982 Glycosyltransferase family 20 RGRSB_0177 PF00085 Thioredoxin RGRSB_0178 PF08323 Starch synthase catalytic domain RGRSB_0178 PF00534 Glycosyl transferases group 1 RGRSB_0179 PF13180 PDZ domain RGRSB_0182 PF00625 Guanylate kinase RGRSB_0185 PF00107 Zinc-binding dehydrogenase RGRSB_0185 PF08240 Alcohol dehydrogenase GroES-like domain RGRSB_0186 PF01915 Glycosyl hydrolase family 3 C-terminal domain RGRSB_0186 PF00933 Glycosyl hydrolase family 3 N terminal domain RGRSB_0189 PF02915 Rubrerythrin RGRSB_0191 PF00677 Lumazine binding domain RGRSB_0195 PF03129 Anticodon binding domain RGRSB_0195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RGRSB_0195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RGRSB_0196 PF00005 ABC transporter RGRSB_0198 PF01078 Magnesium chelatase, subunit ChlI RGRSB_0198 PF17863 AAA lid domain RGRSB_0199 PF01327 Polypeptide deformylase RGRSB_0201 PF02824 TGS domain RGRSB_0201 PF13291 ACT domain RGRSB_0201 PF04607 Region found in RelA / SpoT proteins RGRSB_0203 PF00675 Insulinase (Peptidase family M16) RGRSB_0203 PF05193 Peptidase M16 inactive domain RGRSB_0205 PF03109 ABC1 family RGRSB_0208 PF04542 Sigma-70 region 2 RGRSB_0208 PF04545 Sigma-70, region 4 RGRSB_0208 PF04539 Sigma-70 region 3 RGRSB_0208 PF00140 Sigma-70 factor, region 1.2 RGRSB_0209 PF17764 3′ DNA-binding domain (3′BD) RGRSB_0209 PF18074 Primosomal protein N C-terminal domain RGRSB_0209 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RGRSB_0209 PF00271 Helicase conserved C-terminal domain RGRSB_0209 PF00270 DEAD/DEAH box helicase RGRSB_0210 PF00849 RNA pseudouridylate synthase RGRSB_0210 PF01479 S4 domain RGRSB_0212 PF00171 Aldehyde dehydrogenase family RGRSB_0213 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RGRSB_0213 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RGRSB_0213 PF00205 Thiamine pyrophosphate enzyme, central domain RGRSB_0215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RGRSB_0216 PF13089 Polyphosphate kinase N-terminal domain RGRSB_0216 PF17941 Polyphosphate kinase C-terminal domain 1 RGRSB_0216 PF13090 Polyphosphate kinase C-terminal domain 2 RGRSB_0216 PF02503 Polyphosphate kinase middle domain RGRSB_0217 PF08245 Mur ligase middle domain RGRSB_0217 PF02875 Mur ligase family, glutamate ligase domain RGRSB_0217 PF01225 Mur ligase family, catalytic domain RGRSB_0218 PF12146 Serine aminopeptidase, S33 RGRSB_0220 PF01207 Dihydrouridine synthase (Dus) RGRSB_0225 PF00459 Inositol monophosphatase family RGRSB_0227 PF00654 Voltage gated chloride channel RGRSB_0228 PF01513 ATP-NAD kinase RGRSB_0229 PF02350 UDP-N-acetylglucosamine 2-epimerase RGRSB_0231 PF00005 ABC transporter RGRSB_0233 PF00005 ABC transporter RGRSB_0234 PF01370 NAD dependent epimerase/dehydratase family RGRSB_0237 PF00171 Aldehyde dehydrogenase family RGRSB_0238 PF17284 Spermidine synthase tetramerisation domain RGRSB_0239 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RGRSB_0239 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGRSB_0241 PF00291 Pyridoxal-phosphate dependent enzyme RGRSB_0248 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_0252 PF02675 S-adenosylmethionine decarboxylase RGRSB_0254 PF06470 SMC proteins Flexible Hinge Domain RGRSB_0254 PF02463 RecF/RecN/SMC N terminal domain RGRSB_0256 PF07085 DRTGG domain RGRSB_0258 PF08241 Methyltransferase domain RGRSB_0259 PF03717 Penicillin-binding Protein dimerisation domain RGRSB_0259 PF00905 Penicillin binding protein transpeptidase domain RGRSB_0261 PF00535 Glycosyl transferase family 2 RGRSB_0263 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain RGRSB_0263 PF07228 Stage II sporulation protein E (SpoIIE) RGRSB_0270 PF00390 Malic enzyme, N-terminal domain RGRSB_0270 PF03949 Malic enzyme, NAD binding domain RGRSB_0271 PF02233 NAD(P) transhydrogenase beta subunit RGRSB_0272 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RGRSB_0273 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RGRSB_0273 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RGRSB_0277 PF17969 L,D-transpeptidase C-terminal domain RGRSB_0277 PF03734 L,D-transpeptidase catalytic domain RGRSB_0278 PF04966 Carbohydrate-selective porin, OprB family RGRSB_0281 PF01523 Putative modulator of DNA gyrase RGRSB_0282 PF02881 SRP54-type protein, helical bundle domain RGRSB_0282 PF00448 SRP54-type protein, GTPase domain RGRSB_0285 PF03773 Predicted permease RGRSB_0286 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGRSB_0287 PF02570 Precorrin-8X methylmutase RGRSB_0288 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_0289 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGRSB_0296 PF07688 KaiA C-terminal domain RGRSB_0297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGRSB_0297 PF00672 HAMP domain RGRSB_0297 PF00512 His Kinase A (phospho-acceptor) domain RGRSB_0297 PF01627 Hpt domain RGRSB_0297 PF00072 Response regulator receiver domain RGRSB_0297 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RGRSB_0300 PF02361 Cobalt transport protein RGRSB_0302 PF01225 Mur ligase family, catalytic domain RGRSB_0302 PF02875 Mur ligase family, glutamate ligase domain RGRSB_0302 PF08245 Mur ligase middle domain RGRSB_0303 PF00487 Fatty acid desaturase RGRSB_0306 PF01063 Amino-transferase class IV RGRSB_0310 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RGRSB_0310 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RGRSB_0312 PF01594 AI-2E family transporter RGRSB_0320 PF01370 NAD dependent epimerase/dehydratase family RGRSB_0322 PF00549 CoA-ligase RGRSB_0322 PF02629 CoA binding domain RGRSB_0323 PF00549 CoA-ligase RGRSB_0323 PF08442 ATP-grasp domain RGRSB_0325 PF13180 PDZ domain RGRSB_0327 PF02163 Peptidase family M50 RGRSB_0327 PF00571 CBS domain RGRSB_0328 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RGRSB_0328 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RGRSB_0333 PF04760 Translation initiation factor IF-2, N-terminal region RGRSB_0333 PF11987 Translation-initiation factor 2 RGRSB_0333 PF00009 Elongation factor Tu GTP binding domain RGRSB_0335 PF00575 S1 RNA binding domain RGRSB_0335 PF08529 NusA N-terminal domain RGRSB_0335 PF13184 NusA-like KH domain RGRSB_0338 PF00400 WD domain, G-beta repeat RGRSB_0339 PF14306 PUA-like domain RGRSB_0339 PF01747 ATP-sulfurylase RGRSB_0341 PF04452 RNA methyltransferase RGRSB_0343 PF02441 Flavoprotein RGRSB_0344 PF00459 Inositol monophosphatase family RGRSB_0345 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_0346 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_0347 PF01547 Bacterial extracellular solute-binding protein RGRSB_0348 PF00005 ABC transporter RGRSB_0348 PF17912 MalK OB fold domain RGRSB_0348 PF03459 TOBE domain RGRSB_0352 PF00809 Pterin binding enzyme RGRSB_0352 PF02574 Homocysteine S-methyltransferase RGRSB_0352 PF02965 Vitamin B12 dependent methionine synthase, activation domain RGRSB_0352 PF02607 B12 binding domain RGRSB_0352 PF02310 B12 binding domain RGRSB_0356 PF01026 TatD related DNase RGRSB_0357 PF04565 RNA polymerase Rpb2, domain 3 RGRSB_0357 PF04560 RNA polymerase Rpb2, domain 7 RGRSB_0357 PF04561 RNA polymerase Rpb2, domain 2 RGRSB_0357 PF10385 RNA polymerase beta subunit external 1 domain RGRSB_0357 PF04563 RNA polymerase beta subunit RGRSB_0357 PF00562 RNA polymerase Rpb2, domain 6 RGRSB_0359 PF00072 Response regulator receiver domain RGRSB_0360 PF02086 D12 class N6 adenine-specific DNA methyltransferase RGRSB_0363 PF00881 Nitroreductase family RGRSB_0364 PF01134 Glucose inhibited division protein A RGRSB_0364 PF13932 GidA associated domain RGRSB_0366 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RGRSB_0370 PF07444 Ycf66 protein N-terminus RGRSB_0371 PF00285 Citrate synthase, C-terminal domain RGRSB_0374 PF01975 Survival protein SurE RGRSB_0376 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGRSB_0376 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RGRSB_0378 PF00999 Sodium/hydrogen exchanger family RGRSB_0379 PF01520 N-acetylmuramoyl-L-alanine amidase RGRSB_0382 PF00348 Polyprenyl synthetase RGRSB_0389 PF00912 Transglycosylase RGRSB_0389 PF00905 Penicillin binding protein transpeptidase domain RGRSB_0391 PF13180 PDZ domain RGRSB_0392 PF00512 His Kinase A (phospho-acceptor) domain RGRSB_0392 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGRSB_0392 PF13426 PAS domain RGRSB_0392 PF00672 HAMP domain RGRSB_0395 PF10141 Single-strand DNA-specific exonuclease, C terminal domain RGRSB_0395 PF02272 DHHA1 domain RGRSB_0395 PF17768 RecJ OB domain RGRSB_0395 PF01368 DHH family RGRSB_0404 PF00459 Inositol monophosphatase family RGRSB_0416 PF12966 N-ATPase, AtpR subunit RGRSB_0420 PF00430 ATP synthase B/B' CF(0) RGRSB_0425 PF01791 DeoC/LacD family aldolase RGRSB_0428 PF02514 CobN/Magnesium Chelatase RGRSB_0428 PF11965 Domain of unknown function (DUF3479) RGRSB_0429 PF02817 e3 binding domain RGRSB_0429 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RGRSB_0429 PF00364 Biotin-requiring enzyme RGRSB_0433 PF00912 Transglycosylase RGRSB_0433 PF00905 Penicillin binding protein transpeptidase domain RGRSB_0435 PF00291 Pyridoxal-phosphate dependent enzyme RGRSB_0437 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RGRSB_0441 PF10502 Signal peptidase, peptidase S26 RGRSB_0442 PF09055 Nickel-containing superoxide dismutase RGRSB_0448 PF00676 Dehydrogenase E1 component RGRSB_0449 PF00226 DnaJ domain RGRSB_0449 PF01556 DnaJ C terminal domain RGRSB_0449 PF00684 DnaJ central domain RGRSB_0450 PF01165 Ribosomal protein S21 RGRSB_0451 PF01253 Translation initiation factor SUI1 RGRSB_0453 PF07969 Amidohydrolase family RGRSB_0455 PF00183 Hsp90 protein RGRSB_0457 PF01207 Dihydrouridine synthase (Dus) RGRSB_0468 PF00366 Ribosomal protein S17 RGRSB_0477 PF00344 SecY translocase RGRSB_0479 PF01176 Translation initiation factor 1A / IF-1 RGRSB_0480 PF00444 Ribosomal protein L36 RGRSB_0483 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RGRSB_0483 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RGRSB_0483 PF01000 RNA polymerase Rpb3/RpoA insert domain RGRSB_0491 PF16916 Dimerisation domain of Zinc Transporter RGRSB_0491 PF01545 Cation efflux family RGRSB_0492 PF01336 OB-fold nucleic acid binding domain RGRSB_0492 PF07733 Bacterial DNA polymerase III alpha NTPase domain RGRSB_0492 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RGRSB_0492 PF14579 Helix-hairpin-helix motif RGRSB_0492 PF02811 PHP domain RGRSB_0493 PF01507 Phosphoadenosine phosphosulfate reductase family RGRSB_0494 PF00696 Amino acid kinase family RGRSB_0496 PF02325 YGGT family RGRSB_0498 PF02684 Lipid-A-disaccharide synthetase RGRSB_0500 PF01546 Peptidase family M20/M25/M40 RGRSB_0500 PF07687 Peptidase dimerisation domain RGRSB_0503 PF01479 S4 domain RGRSB_0503 PF01728 FtsJ-like methyltransferase RGRSB_0505 PF00148 Nitrogenase component 1 type Oxidoreductase RGRSB_0506 PF08486 Stage II sporulation protein RGRSB_0507 PF03989 DNA gyrase C-terminal domain, beta-propeller RGRSB_0507 PF00521 DNA gyrase/topoisomerase IV, subunit A RGRSB_0508 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RGRSB_0508 PF00128 Alpha amylase, catalytic domain RGRSB_0509 PF02657 Fe-S metabolism associated domain RGRSB_0511 PF00266 Aminotransferase class-V RGRSB_0516 PF12849 PBP superfamily domain RGRSB_0517 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_0518 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_0519 PF00005 ABC transporter RGRSB_0520 PF00005 ABC transporter RGRSB_0524 PF06745 KaiC RGRSB_0524 PF18073 Rubredoxin metal binding domain RGRSB_0525 PF00072 Response regulator receiver domain RGRSB_0525 PF00486 Transcriptional regulatory protein, C terminal RGRSB_0526 PF01888 CbiD RGRSB_0532 PF00012 Hsp70 protein RGRSB_0534 PF13439 Glycosyltransferase Family 4 RGRSB_0534 PF00534 Glycosyl transferases group 1 RGRSB_0538 PF07977 FabA-like domain RGRSB_0539 PF00571 CBS domain RGRSB_0539 PF01769 Divalent cation transporter RGRSB_0539 PF03448 MgtE intracellular N domain RGRSB_0540 PF10369 Small subunit of acetolactate synthase RGRSB_0543 PF16166 Chloroplast import apparatus Tic20-like RGRSB_0544 PF01557 Fumarylacetoacetate (FAA) hydrolase family RGRSB_0549 PF02941 Ferredoxin thioredoxin reductase variable alpha chain RGRSB_0550 PF16363 GDP-mannose 4,6 dehydratase RGRSB_0553 PF01648 4'-phosphopantetheinyl transferase superfamily RGRSB_0555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RGRSB_0555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RGRSB_0558 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGRSB_0562 PF00465 Iron-containing alcohol dehydrogenase RGRSB_0563 PF00582 Universal stress protein family RGRSB_0565 PF00127 Copper binding proteins, plastocyanin/azurin family RGRSB_0566 PF00155 Aminotransferase class I and II RGRSB_0570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGRSB_0571 PF01702 Queuine tRNA-ribosyltransferase RGRSB_0573 PF04966 Carbohydrate-selective porin, OprB family RGRSB_0574 PF01895 PhoU domain RGRSB_0575 PF00557 Metallopeptidase family M24 RGRSB_0576 PF00175 Oxidoreductase NAD-binding domain RGRSB_0579 PF03819 MazG nucleotide pyrophosphohydrolase domain RGRSB_0580 PF10502 Signal peptidase, peptidase S26 RGRSB_0581 PF02492 CobW/HypB/UreG, nucleotide-binding domain RGRSB_0583 PF12697 Alpha/beta hydrolase family RGRSB_0584 PF00072 Response regulator receiver domain RGRSB_0584 PF00486 Transcriptional regulatory protein, C terminal RGRSB_0591 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGRSB_0591 PF00512 His Kinase A (phospho-acceptor) domain RGRSB_0591 PF07689 KaiB domain RGRSB_0599 PF08264 Anticodon-binding domain of tRNA RGRSB_0599 PF00133 tRNA synthetases class I (I, L, M and V) RGRSB_0599 PF10458 Valyl tRNA synthetase tRNA binding arm RGRSB_0601 PF00551 Formyl transferase RGRSB_0602 PF00355 Rieske [2Fe-2S] domain RGRSB_0604 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RGRSB_0607 PF00106 short chain dehydrogenase RGRSB_0608 PF00005 ABC transporter RGRSB_0611 PF01618 MotA/TolQ/ExbB proton channel family RGRSB_0612 PF02472 Biopolymer transport protein ExbD/TolR RGRSB_0616 PF01050 Mannose-6-phosphate isomerase RGRSB_0616 PF00483 Nucleotidyl transferase RGRSB_0619 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGRSB_0620 PF02347 Glycine cleavage system P-protein RGRSB_0622 PF00483 Nucleotidyl transferase RGRSB_0624 PF00266 Aminotransferase class-V RGRSB_0633 PF03699 Uncharacterised protein family (UPF0182) RGRSB_0640 PF02405 Permease MlaE RGRSB_0645 PF16861 Carbamoyltransferase C-terminus RGRSB_0645 PF02543 Carbamoyltransferase N-terminus RGRSB_0647 PF04542 Sigma-70 region 2 RGRSB_0647 PF04539 Sigma-70 region 3 RGRSB_0647 PF04545 Sigma-70, region 4 RGRSB_0647 PF00140 Sigma-70 factor, region 1.2 RGRSB_0649 PF02681 Divergent PAP2 family RGRSB_0650 PF00348 Polyprenyl synthetase RGRSB_0654 PF01370 NAD dependent epimerase/dehydratase family RGRSB_0655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RGRSB_0655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RGRSB_0655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RGRSB_0656 PF13419 Haloacid dehalogenase-like hydrolase RGRSB_0657 PF01551 Peptidase family M23 RGRSB_0657 PF08525 Opacity-associated protein A N-terminal motif RGRSB_0657 PF01476 LysM domain RGRSB_0659 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RGRSB_0659 PF00753 Metallo-beta-lactamase superfamily RGRSB_0659 PF17770 Ribonuclease J C-terminal domain RGRSB_0660 PF00701 Dihydrodipicolinate synthetase family RGRSB_0661 PF01118 Semialdehyde dehydrogenase, NAD binding domain RGRSB_0661 PF02774 Semialdehyde dehydrogenase, dimerisation domain RGRSB_0663 PF00574 Clp protease RGRSB_0666 PF01812 5-formyltetrahydrofolate cyclo-ligase family RGRSB_0670 PF00145 C-5 cytosine-specific DNA methylase RGRSB_0671 PF03372 Endonuclease/Exonuclease/phosphatase family RGRSB_0672 PF00595 PDZ domain RGRSB_0672 PF03572 Peptidase family S41 RGRSB_0674 PF01593 Flavin containing amine oxidoreductase RGRSB_0682 PF00557 Metallopeptidase family M24 RGRSB_0682 PF05195 Aminopeptidase P, N-terminal domain RGRSB_0683 PF10792 Protein of unknown function (DUF2605) RGRSB_0685 PF00106 short chain dehydrogenase RGRSB_0687 PF13519 von Willebrand factor type A domain RGRSB_0687 PF01078 Magnesium chelatase, subunit ChlI RGRSB_0687 PF17863 AAA lid domain RGRSB_0688 PF04241 Protein of unknown function (DUF423) RGRSB_0691 PF03330 Lytic transglycolase RGRSB_0695 PF12911 N-terminal TM domain of oligopeptide transport permease C RGRSB_0695 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_0697 PF00474 Sodium:solute symporter family RGRSB_0698 PF17862 AAA+ lid domain RGRSB_0698 PF06480 FtsH Extracellular RGRSB_0698 PF01434 Peptidase family M41 RGRSB_0698 PF00004 ATPase family associated with various cellular activities (AAA) RGRSB_0699 PF00326 Prolyl oligopeptidase family RGRSB_0701 PF04542 Sigma-70 region 2 RGRSB_0701 PF08281 Sigma-70, region 4 RGRSB_0704 PF00501 AMP-binding enzyme RGRSB_0708 PF00909 Ammonium Transporter Family RGRSB_0709 PF01872 RibD C-terminal domain RGRSB_0709 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RGRSB_0711 PF01084 Ribosomal protein S18 RGRSB_0712 PF00773 RNB domain RGRSB_0716 PF03900 Porphobilinogen deaminase, C-terminal domain RGRSB_0716 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RGRSB_0717 PF01218 Coproporphyrinogen III oxidase RGRSB_0718 PF01593 Flavin containing amine oxidoreductase RGRSB_0720 PF02581 Thiamine monophosphate synthase RGRSB_0720 PF17792 ThiD2 family RGRSB_0722 PF01596 O-methyltransferase RGRSB_0723 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RGRSB_0723 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RGRSB_0723 PF00205 Thiamine pyrophosphate enzyme, central domain RGRSB_0725 PF03808 Glycosyl transferase WecB/TagA/CpsF family RGRSB_0727 PF00155 Aminotransferase class I and II RGRSB_0729 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RGRSB_0730 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_0736 PF00300 Histidine phosphatase superfamily (branch 1) RGRSB_0737 PF00694 Aconitase C-terminal domain RGRSB_0738 PF08331 Domain of unknown function (DUF1730) RGRSB_0740 PF03209 PUCC protein RGRSB_0741 PF10502 Signal peptidase, peptidase S26 RGRSB_0742 PF01979 Amidohydrolase family RGRSB_0743 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) RGRSB_0747 PF12169 DNA polymerase III subunits gamma and tau domain III RGRSB_0748 PF02342 TerD domain RGRSB_0750 PF01027 Inhibitor of apoptosis-promoting Bax1 RGRSB_0758 PF01050 Mannose-6-phosphate isomerase RGRSB_0758 PF00483 Nucleotidyl transferase RGRSB_0759 PF03109 ABC1 family RGRSB_0762 PF00684 DnaJ central domain RGRSB_0762 PF00226 DnaJ domain RGRSB_0762 PF01556 DnaJ C terminal domain RGRSB_0764 PF02082 Transcriptional regulator RGRSB_0765 PF03186 CobD/Cbib protein RGRSB_0766 PF00155 Aminotransferase class I and II RGRSB_0767 PF00216 Bacterial DNA-binding protein RGRSB_0768 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RGRSB_0768 PF12557 Cob(I)alamin adenosyltransferase N terminal RGRSB_0770 PF04542 Sigma-70 region 2 RGRSB_0770 PF04539 Sigma-70 region 3 RGRSB_0770 PF00140 Sigma-70 factor, region 1.2 RGRSB_0770 PF04545 Sigma-70, region 4 RGRSB_0779 PF16363 GDP-mannose 4,6 dehydratase RGRSB_0780 PF04371 Porphyromonas-type peptidyl-arginine deiminase RGRSB_0781 PF00795 Carbon-nitrogen hydrolase RGRSB_0782 PF17676 LD-carboxypeptidase C-terminal domain RGRSB_0782 PF02016 LD-carboxypeptidase N-terminal domain RGRSB_0784 PF00535 Glycosyl transferase family 2 RGRSB_0789 PF01551 Peptidase family M23 RGRSB_0789 PF01476 LysM domain RGRSB_0790 PF01451 Low molecular weight phosphotyrosine protein phosphatase RGRSB_0794 PF00902 Sec-independent protein translocase protein (TatC) RGRSB_0798 PF01336 OB-fold nucleic acid binding domain RGRSB_0798 PF02811 PHP domain RGRSB_0798 PF07733 Bacterial DNA polymerase III alpha NTPase domain RGRSB_0798 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RGRSB_0798 PF14579 Helix-hairpin-helix motif RGRSB_0805 PF01926 50S ribosome-binding GTPase RGRSB_0805 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RGRSB_0817 PF04055 Radical SAM superfamily RGRSB_0818 PF00512 His Kinase A (phospho-acceptor) domain RGRSB_0818 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGRSB_0818 PF07689 KaiB domain RGRSB_0819 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGRSB_0819 PF00512 His Kinase A (phospho-acceptor) domain RGRSB_0819 PF09308 LuxQ, periplasmic RGRSB_0819 PF00072 Response regulator receiver domain RGRSB_0821 PF01170 Putative RNA methylase family UPF0020 RGRSB_0821 PF02926 THUMP domain RGRSB_0822 PF00268 Ribonucleotide reductase, small chain RGRSB_0823 PF03477 ATP cone domain RGRSB_0823 PF00317 Ribonucleotide reductase, all-alpha domain RGRSB_0823 PF02867 Ribonucleotide reductase, barrel domain RGRSB_0829 PF03471 Transporter associated domain RGRSB_0829 PF01595 Cyclin M transmembrane N-terminal domain RGRSB_0829 PF00571 CBS domain RGRSB_0832 PF02310 B12 binding domain RGRSB_0832 PF04055 Radical SAM superfamily RGRSB_0833 PF11266 Long-chain fatty aldehyde decarbonylase RGRSB_0834 PF17755 UvrA DNA-binding domain RGRSB_0834 PF17760 UvrA interaction domain RGRSB_0837 PF03816 Cell envelope-related transcriptional attenuator domain RGRSB_0839 PF00293 NUDIX domain RGRSB_0842 PF04545 Sigma-70, region 4 RGRSB_0842 PF04539 Sigma-70 region 3 RGRSB_0842 PF04542 Sigma-70 region 2 RGRSB_0842 PF00140 Sigma-70 factor, region 1.2 RGRSB_0845 PF02542 YgbB family RGRSB_0846 PF01336 OB-fold nucleic acid binding domain RGRSB_0846 PF00152 tRNA synthetases class II (D, K and N) RGRSB_0848 PF01641 SelR domain RGRSB_0852 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RGRSB_0852 PF01872 RibD C-terminal domain RGRSB_0855 PF05378 Hydantoinase/oxoprolinase N-terminal region RGRSB_0855 PF01968 Hydantoinase/oxoprolinase RGRSB_0857 PF01230 HIT domain RGRSB_0858 PF01521 Iron-sulphur cluster biosynthesis RGRSB_0860 PF01435 Peptidase family M48 RGRSB_0864 PF00535 Glycosyl transferase family 2 RGRSB_0867 PF01209 ubiE/COQ5 methyltransferase family RGRSB_0872 PF13439 Glycosyltransferase Family 4 RGRSB_0872 PF00534 Glycosyl transferases group 1 RGRSB_0875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RGRSB_0875 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RGRSB_0876 PF00111 2Fe-2S iron-sulfur cluster binding domain RGRSB_0886 PF10674 Protein of unknown function (DUF2488) RGRSB_0888 PF12704 MacB-like periplasmic core domain RGRSB_0888 PF02687 FtsX-like permease family RGRSB_0888 PF00005 ABC transporter RGRSB_0894 PF00588 SpoU rRNA Methylase family RGRSB_0894 PF12105 SpoU, rRNA methylase, C-terminal RGRSB_0900 PF01842 ACT domain RGRSB_0900 PF00800 Prephenate dehydratase RGRSB_0900 PF01817 Chorismate mutase type II RGRSB_0901 PF10150 Ribonuclease E/G family RGRSB_0905 PF00266 Aminotransferase class-V RGRSB_0907 PF00595 PDZ domain RGRSB_0907 PF03572 Peptidase family S41 RGRSB_0908 PF00293 NUDIX domain RGRSB_0911 PF12965 Domain of unknown function (DUF3854) RGRSB_0912 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RGRSB_0912 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGRSB_0916 PF00578 AhpC/TSA family RGRSB_0916 PF10417 C-terminal domain of 1-Cys peroxiredoxin RGRSB_0919 PF01556 DnaJ C terminal domain RGRSB_0919 PF00226 DnaJ domain RGRSB_0923 PF00117 Glutamine amidotransferase class-I RGRSB_0923 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RGRSB_0927 PF01903 CbiX RGRSB_0930 PF00731 AIR carboxylase RGRSB_0931 PF01979 Amidohydrolase family RGRSB_0932 PF02811 PHP domain RGRSB_0936 PF01726 LexA DNA binding domain RGRSB_0936 PF00717 Peptidase S24-like RGRSB_0938 PF01926 50S ribosome-binding GTPase RGRSB_0938 PF10396 GTP-binding protein TrmE N-terminus RGRSB_0938 PF12631 MnmE helical domain RGRSB_0940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RGRSB_0940 PF00289 Biotin carboxylase, N-terminal domain RGRSB_0940 PF02785 Biotin carboxylase C-terminal domain RGRSB_0946 PF00310 Glutamine amidotransferases class-II RGRSB_0946 PF01645 Conserved region in glutamate synthase RGRSB_0946 PF01493 GXGXG motif RGRSB_0946 PF04898 Glutamate synthase central domain RGRSB_0948 PF01551 Peptidase family M23 RGRSB_0949 PF03447 Homoserine dehydrogenase, NAD binding domain RGRSB_0949 PF00742 Homoserine dehydrogenase RGRSB_0949 PF01842 ACT domain RGRSB_0962 PF00834 Ribulose-phosphate 3 epimerase family RGRSB_0964 PF01556 DnaJ C terminal domain RGRSB_0964 PF00684 DnaJ central domain RGRSB_0964 PF00226 DnaJ domain RGRSB_0965 PF02416 mttA/Hcf106 family RGRSB_0967 PF02632 BioY family RGRSB_0972 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain RGRSB_0973 PF02562 PhoH-like protein RGRSB_0974 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RGRSB_0976 PF01171 PP-loop family RGRSB_0976 PF09179 TilS substrate binding domain RGRSB_0983 PF00156 Phosphoribosyl transferase domain RGRSB_0987 PF12911 N-terminal TM domain of oligopeptide transport permease C RGRSB_0987 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_0989 PF01106 NifU-like domain RGRSB_0990 PF00476 DNA polymerase family A RGRSB_0990 PF01612 3'-5' exonuclease RGRSB_0991 PF04055 Radical SAM superfamily RGRSB_0993 PF00490 Delta-aminolevulinic acid dehydratase RGRSB_0994 PF01479 S4 domain RGRSB_0994 PF00849 RNA pseudouridylate synthase RGRSB_0998 PF01266 FAD dependent oxidoreductase RGRSB_0999 PF01751 Toprim domain RGRSB_0999 PF01131 DNA topoisomerase RGRSB_0999 PF13368 Topoisomerase C-terminal repeat RGRSB_1002 PF14748 Pyrroline-5-carboxylate reductase dimerisation RGRSB_1002 PF03807 NADP oxidoreductase coenzyme F420-dependent RGRSB_1004 PF01168 Alanine racemase, N-terminal domain RGRSB_1008 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RGRSB_1008 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RGRSB_1016 PF08669 Glycine cleavage T-protein C-terminal barrel domain RGRSB_1016 PF01571 Aminomethyltransferase folate-binding domain RGRSB_1018 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RGRSB_1018 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RGRSB_1019 PF00391 PEP-utilising enzyme, mobile domain RGRSB_1019 PF02896 PEP-utilising enzyme, TIM barrel domain RGRSB_1019 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RGRSB_1021 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RGRSB_1021 PF09363 XFP C-terminal domain RGRSB_1021 PF09364 XFP N-terminal domain RGRSB_1022 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RGRSB_1023 PF01699 Sodium/calcium exchanger protein RGRSB_1025 PF01790 Prolipoprotein diacylglyceryl transferase RGRSB_1029 PF09115 DNA polymerase III, delta subunit, C terminal RGRSB_1031 PF00403 Heavy-metal-associated domain RGRSB_1033 PF02767 DNA polymerase III beta subunit, central domain RGRSB_1033 PF02768 DNA polymerase III beta subunit, C-terminal domain RGRSB_1033 PF00712 DNA polymerase III beta subunit, N-terminal domain RGRSB_1037 PF13419 Haloacid dehalogenase-like hydrolase RGRSB_1038 PF00128 Alpha amylase, catalytic domain RGRSB_1040 PF03816 Cell envelope-related transcriptional attenuator domain RGRSB_1041 PF00069 Protein kinase domain RGRSB_1044 PF03099 Biotin/lipoate A/B protein ligase family RGRSB_1045 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RGRSB_1045 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RGRSB_1049 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RGRSB_1049 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RGRSB_1051 PF12804 MobA-like NTP transferase domain RGRSB_1051 PF00132 Bacterial transferase hexapeptide (six repeats) RGRSB_1052 PF08544 GHMP kinases C terminal RGRSB_1052 PF00288 GHMP kinases N terminal domain RGRSB_1054 PF00140 Sigma-70 factor, region 1.2 RGRSB_1054 PF04542 Sigma-70 region 2 RGRSB_1054 PF04545 Sigma-70, region 4 RGRSB_1054 PF04539 Sigma-70 region 3 RGRSB_1058 PF06434 Aconitate hydratase 2 N-terminus RGRSB_1058 PF00330 Aconitase family (aconitate hydratase) RGRSB_1058 PF11791 Aconitate B N-terminal domain RGRSB_1068 PF05199 GMC oxidoreductase RGRSB_1069 PF03109 ABC1 family RGRSB_1073 PF00557 Metallopeptidase family M24 RGRSB_1075 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_1076 PF00035 Double-stranded RNA binding motif RGRSB_1076 PF14622 Ribonuclease-III-like RGRSB_1079 PF01938 TRAM domain RGRSB_1079 PF13847 Methyltransferase domain RGRSB_1082 PF01925 Sulfite exporter TauE/SafE RGRSB_1083 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RGRSB_1083 PF02806 Alpha amylase, C-terminal all-beta domain RGRSB_1083 PF00128 Alpha amylase, catalytic domain RGRSB_1089 PF02529 Cytochrome B6-F complex subunit 5 RGRSB_1090 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RGRSB_1091 PF01933 Uncharacterised protein family UPF0052 RGRSB_1094 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_1096 PF02685 Glucokinase RGRSB_1097 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RGRSB_1100 PF02223 Thymidylate kinase RGRSB_1102 PF10431 C-terminal, D2-small domain, of ClpB protein RGRSB_1102 PF00004 ATPase family associated with various cellular activities (AAA) RGRSB_1102 PF07724 AAA domain (Cdc48 subfamily) RGRSB_1102 PF17871 AAA lid domain RGRSB_1102 PF02861 Clp amino terminal domain, pathogenicity island component RGRSB_1104 PF02769 AIR synthase related protein, C-terminal domain RGRSB_1104 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RGRSB_1104 PF00586 AIR synthase related protein, N-terminal domain RGRSB_1105 PF00156 Phosphoribosyl transferase domain RGRSB_1106 PF13476 AAA domain RGRSB_1109 PF02152 Dihydroneopterin aldolase RGRSB_1110 PF01694 Rhomboid family RGRSB_1111 PF01066 CDP-alcohol phosphatidyltransferase RGRSB_1114 PF03764 Elongation factor G, domain IV RGRSB_1114 PF00679 Elongation factor G C-terminus RGRSB_1114 PF14492 Elongation Factor G, domain II RGRSB_1114 PF00009 Elongation factor Tu GTP binding domain RGRSB_1114 PF03144 Elongation factor Tu domain 2 RGRSB_1117 PF01521 Iron-sulphur cluster biosynthesis RGRSB_1119 PF00586 AIR synthase related protein, N-terminal domain RGRSB_1119 PF02769 AIR synthase related protein, C-terminal domain RGRSB_1124 PF00132 Bacterial transferase hexapeptide (six repeats) RGRSB_1130 PF00953 Glycosyl transferase family 4 RGRSB_1131 PF17284 Spermidine synthase tetramerisation domain RGRSB_1133 PF08245 Mur ligase middle domain RGRSB_1134 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RGRSB_1136 PF11283 Protein of unknown function (DUF3084) RGRSB_1137 PF13545 Crp-like helix-turn-helix domain RGRSB_1137 PF00027 Cyclic nucleotide-binding domain RGRSB_1140 PF03092 BT1 family RGRSB_1146 PF00005 ABC transporter RGRSB_1151 PF03649 Uncharacterised protein family (UPF0014) RGRSB_1153 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RGRSB_1153 PF01502 Phosphoribosyl-AMP cyclohydrolase RGRSB_1154 PF00202 Aminotransferase class-III RGRSB_1161 PF00478 IMP dehydrogenase / GMP reductase domain RGRSB_1162 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RGRSB_1162 PF02142 MGS-like domain RGRSB_1162 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RGRSB_1163 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RGRSB_1163 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RGRSB_1163 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RGRSB_1163 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RGRSB_1165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGRSB_1165 PF00512 His Kinase A (phospho-acceptor) domain RGRSB_1165 PF00989 PAS fold RGRSB_1167 PF00486 Transcriptional regulatory protein, C terminal RGRSB_1167 PF00072 Response regulator receiver domain RGRSB_1168 PF02633 Creatinine amidohydrolase RGRSB_1169 PF00575 S1 RNA binding domain RGRSB_1171 PF00196 Bacterial regulatory proteins, luxR family RGRSB_1171 PF00072 Response regulator receiver domain RGRSB_1174 PF03437 BtpA family RGRSB_1175 PF07884 Vitamin K epoxide reductase family RGRSB_1184 PF00364 Biotin-requiring enzyme RGRSB_1187 PF10397 Adenylosuccinate lyase C-terminus RGRSB_1187 PF00206 Lyase RGRSB_1190 PF00636 Ribonuclease III domain RGRSB_1190 PF00035 Double-stranded RNA binding motif RGRSB_1191 PF00535 Glycosyl transferase family 2 RGRSB_1196 PF01116 Fructose-bisphosphate aldolase class-II RGRSB_1200 PF02130 Uncharacterized protein family UPF0054 RGRSB_1201 PF01219 Prokaryotic diacylglycerol kinase RGRSB_1202 PF02885 Glycosyl transferase family, helical bundle domain RGRSB_1202 PF00591 Glycosyl transferase family, a/b domain RGRSB_1202 PF00117 Glutamine amidotransferase class-I RGRSB_1206 PF03466 LysR substrate binding domain RGRSB_1206 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGRSB_1216 PF00005 ABC transporter RGRSB_1217 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RGRSB_1221 PF00588 SpoU rRNA Methylase family RGRSB_1221 PF08032 RNA 2'-O ribose methyltransferase substrate binding RGRSB_1226 PF01471 Putative peptidoglycan binding domain RGRSB_1226 PF10128 Glucose-6-phosphate dehydrogenase subunit RGRSB_1227 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RGRSB_1227 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RGRSB_1229 PF01894 Uncharacterised protein family UPF0047 RGRSB_1230 PF14572 Phosphoribosyl synthetase-associated domain RGRSB_1230 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RGRSB_1235 PF07685 CobB/CobQ-like glutamine amidotransferase domain RGRSB_1235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGRSB_1236 PF00395 S-layer homology domain RGRSB_1236 PF04966 Carbohydrate-selective porin, OprB family RGRSB_1237 PF14251 Domain of unknown function (DUF4346) RGRSB_1238 PF00391 PEP-utilising enzyme, mobile domain RGRSB_1238 PF02887 Pyruvate kinase, alpha/beta domain RGRSB_1238 PF00224 Pyruvate kinase, barrel domain RGRSB_1239 PF04055 Radical SAM superfamily RGRSB_1239 PF06463 Molybdenum Cofactor Synthesis C RGRSB_1242 PF01523 Putative modulator of DNA gyrase RGRSB_1243 PF07503 HypF finger RGRSB_1243 PF00708 Acylphosphatase RGRSB_1243 PF17788 HypF Kae1-like domain RGRSB_1243 PF01300 Telomere recombination RGRSB_1244 PF01455 HupF/HypC family RGRSB_1246 PF02628 Cytochrome oxidase assembly protein RGRSB_1248 PF12848 ABC transporter RGRSB_1248 PF16326 ABC transporter C-terminal domain RGRSB_1248 PF00005 ABC transporter RGRSB_1250 PF00986 DNA gyrase B subunit, carboxyl terminus RGRSB_1250 PF00204 DNA gyrase B RGRSB_1250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGRSB_1250 PF01751 Toprim domain RGRSB_1251 PF03989 DNA gyrase C-terminal domain, beta-propeller RGRSB_1251 PF00521 DNA gyrase/topoisomerase IV, subunit A RGRSB_1252 PF01713 Smr domain RGRSB_1252 PF00488 MutS domain V RGRSB_1254 PF07549 SecD/SecF GG Motif RGRSB_1254 PF02355 Protein export membrane protein RGRSB_1255 PF07549 SecD/SecF GG Motif RGRSB_1255 PF02355 Protein export membrane protein RGRSB_1256 PF02779 Transketolase, pyrimidine binding domain RGRSB_1256 PF00364 Biotin-requiring enzyme RGRSB_1256 PF02780 Transketolase, C-terminal domain RGRSB_1263 PF01458 Uncharacterized protein family (UPF0051) RGRSB_1264 PF00005 ABC transporter RGRSB_1265 PF01458 Uncharacterized protein family (UPF0051) RGRSB_1266 PF00266 Aminotransferase class-V RGRSB_1268 PF07670 Nucleoside recognition RGRSB_1270 PF00109 Beta-ketoacyl synthase, N-terminal domain RGRSB_1270 PF02801 Beta-ketoacyl synthase, C-terminal domain RGRSB_1271 PF00550 Phosphopantetheine attachment site RGRSB_1273 PF00180 Isocitrate/isopropylmalate dehydrogenase RGRSB_1280 PF00581 Rhodanese-like domain RGRSB_1280 PF00899 ThiF family RGRSB_1282 PF03775 Septum formation inhibitor MinC, C-terminal domain RGRSB_1283 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RGRSB_1284 PF03776 Septum formation topological specificity factor MinE RGRSB_1285 PF02881 SRP54-type protein, helical bundle domain RGRSB_1285 PF00448 SRP54-type protein, GTPase domain RGRSB_1285 PF02978 Signal peptide binding domain RGRSB_1289 PF02446 4-alpha-glucanotransferase RGRSB_1290 PF01725 Ham1 family RGRSB_1292 PF01227 GTP cyclohydrolase I RGRSB_1293 PF00106 short chain dehydrogenase RGRSB_1297 PF00675 Insulinase (Peptidase family M16) RGRSB_1297 PF05193 Peptidase M16 inactive domain RGRSB_1303 PF02357 Transcription termination factor nusG RGRSB_1303 PF00467 KOW motif RGRSB_1304 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RGRSB_1307 PF01740 STAS domain RGRSB_1307 PF00916 Sulfate permease family RGRSB_1308 PF16363 GDP-mannose 4,6 dehydratase RGRSB_1312 PF00675 Insulinase (Peptidase family M16) RGRSB_1312 PF05193 Peptidase M16 inactive domain RGRSB_1313 PF00574 Clp protease RGRSB_1315 PF08206 Ribonuclease B OB domain RGRSB_1315 PF00575 S1 RNA binding domain RGRSB_1315 PF17876 Cold shock domain RGRSB_1315 PF00773 RNB domain RGRSB_1319 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGRSB_1327 PF06838 Methionine gamma-lyase RGRSB_1328 PF00989 PAS fold RGRSB_1328 PF00672 HAMP domain RGRSB_1328 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGRSB_1328 PF00512 His Kinase A (phospho-acceptor) domain RGRSB_1329 PF08502 LeuA allosteric (dimerisation) domain RGRSB_1329 PF00682 HMGL-like RGRSB_1330 PF02463 RecF/RecN/SMC N terminal domain RGRSB_1331 PF03099 Biotin/lipoate A/B protein ligase family RGRSB_1333 PF01475 Ferric uptake regulator family RGRSB_1334 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_1338 PF02575 YbaB/EbfC DNA-binding family RGRSB_1339 PF01565 FAD binding domain RGRSB_1339 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RGRSB_1341 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RGRSB_1341 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RGRSB_1345 PF01743 Poly A polymerase head domain RGRSB_1345 PF12627 Probable RNA and SrmB- binding site of polymerase A RGRSB_1345 PF13735 tRNA nucleotidyltransferase domain 2 putative RGRSB_1348 PF02617 ATP-dependent Clp protease adaptor protein ClpS RGRSB_1350 PF00120 Glutamine synthetase, catalytic domain RGRSB_1350 PF03951 Glutamine synthetase, beta-Grasp domain RGRSB_1355 PF00480 ROK family RGRSB_1357 PF01743 Poly A polymerase head domain RGRSB_1357 PF12627 Probable RNA and SrmB- binding site of polymerase A RGRSB_1357 PF13735 tRNA nucleotidyltransferase domain 2 putative RGRSB_1359 PF05419 GUN4-like RGRSB_1359 PF16416 ARM-like repeat domain, GUN4-N terminal RGRSB_1360 PF02310 B12 binding domain RGRSB_1360 PF04055 Radical SAM superfamily RGRSB_1365 PF00925 GTP cyclohydrolase II RGRSB_1365 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RGRSB_1366 PF08032 RNA 2'-O ribose methyltransferase substrate binding RGRSB_1366 PF00588 SpoU rRNA Methylase family RGRSB_1367 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RGRSB_1369 PF00873 AcrB/AcrD/AcrF family RGRSB_1371 PF00271 Helicase conserved C-terminal domain RGRSB_1371 PF00270 DEAD/DEAH box helicase RGRSB_1373 PF00072 Response regulator receiver domain RGRSB_1373 PF00196 Bacterial regulatory proteins, luxR family RGRSB_1376 PF01687 Riboflavin kinase RGRSB_1376 PF06574 FAD synthetase RGRSB_1382 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGRSB_1385 PF00035 Double-stranded RNA binding motif RGRSB_1385 PF14622 Ribonuclease-III-like RGRSB_1386 PF00392 Bacterial regulatory proteins, gntR family RGRSB_1386 PF07702 UTRA domain RGRSB_1389 PF00101 Ribulose bisphosphate carboxylase, small chain RGRSB_1394 PF00936 BMC domain RGRSB_1395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RGRSB_1395 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus RGRSB_1395 PF00361 Proton-conducting membrane transporter RGRSB_1396 PF00361 Proton-conducting membrane transporter RGRSB_1397 PF02910 Fumarate reductase flavoprotein C-term RGRSB_1397 PF00890 FAD binding domain RGRSB_1399 PF02654 Cobalamin-5-phosphate synthase RGRSB_1402 PF03717 Penicillin-binding Protein dimerisation domain RGRSB_1402 PF00905 Penicillin binding protein transpeptidase domain RGRSB_1402 PF03793 PASTA domain RGRSB_1403 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RGRSB_1403 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RGRSB_1404 PF00115 Cytochrome C and Quinol oxidase polypeptide I RGRSB_1405 PF00510 Cytochrome c oxidase subunit III RGRSB_1406 PF02374 Anion-transporting ATPase RGRSB_1406 PF17886 HSP20-like domain found in ArsA RGRSB_1409 PF03309 Type III pantothenate kinase RGRSB_1410 PF08338 Domain of unknown function (DUF1731) RGRSB_1410 PF01370 NAD dependent epimerase/dehydratase family RGRSB_1413 PF00118 TCP-1/cpn60 chaperonin family RGRSB_1420 PF02080 TrkA-C domain RGRSB_1420 PF03600 Citrate transporter RGRSB_1421 PF13840 ACT domain RGRSB_1421 PF00696 Amino acid kinase family RGRSB_1421 PF01842 ACT domain RGRSB_1426 PF00719 Inorganic pyrophosphatase RGRSB_1430 PF00731 AIR carboxylase RGRSB_1433 PF00005 ABC transporter RGRSB_1435 PF12795 Mechanosensitive ion channel porin domain RGRSB_1435 PF00924 Mechanosensitive ion channel RGRSB_1435 PF12794 Mechanosensitive ion channel inner membrane domain 1 RGRSB_1441 PF08534 Redoxin RGRSB_1443 PF00664 ABC transporter transmembrane region RGRSB_1443 PF00005 ABC transporter RGRSB_1445 PF00403 Heavy-metal-associated domain RGRSB_1451 PF00005 ABC transporter RGRSB_1455 PF03741 Integral membrane protein TerC family RGRSB_1456 PF05188 MutS domain II RGRSB_1456 PF01624 MutS domain I RGRSB_1456 PF00488 MutS domain V RGRSB_1456 PF05192 MutS domain III RGRSB_1456 PF05190 MutS family domain IV RGRSB_1461 PF00485 Phosphoribulokinase / Uridine kinase family RGRSB_1463 PF00171 Aldehyde dehydrogenase family RGRSB_1466 PF13614 AAA domain RGRSB_1469 PF09210 Domain of unknown function (DUF1957) RGRSB_1469 PF03065 Glycosyl hydrolase family 57 RGRSB_1471 PF00535 Glycosyl transferase family 2 RGRSB_1471 PF13181 Tetratricopeptide repeat RGRSB_1473 PF11378 Protein of unknown function (DUF3181) RGRSB_1474 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RGRSB_1475 PF00156 Phosphoribosyl transferase domain RGRSB_1477 PF09382 RQC domain RGRSB_1477 PF16124 RecQ zinc-binding RGRSB_1477 PF00570 HRDC domain RGRSB_1477 PF00271 Helicase conserved C-terminal domain RGRSB_1477 PF00270 DEAD/DEAH box helicase RGRSB_1478 PF00535 Glycosyl transferase family 2 RGRSB_1479 PF02861 Clp amino terminal domain, pathogenicity island component RGRSB_1479 PF00004 ATPase family associated with various cellular activities (AAA) RGRSB_1479 PF17871 AAA lid domain RGRSB_1479 PF10431 C-terminal, D2-small domain, of ClpB protein RGRSB_1479 PF07724 AAA domain (Cdc48 subfamily) RGRSB_1481 PF00795 Carbon-nitrogen hydrolase RGRSB_1481 PF02540 NAD synthase RGRSB_1483 PF01467 Cytidylyltransferase-like RGRSB_1487 PF00809 Pterin binding enzyme RGRSB_1488 PF17944 Arginine decarboxylase C-terminal helical extension RGRSB_1488 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RGRSB_1488 PF17810 Arginine decarboxylase helical bundle domain RGRSB_1489 PF00425 chorismate binding enzyme RGRSB_1489 PF04715 Anthranilate synthase component I, N terminal region RGRSB_1491 PF00005 ABC transporter RGRSB_1491 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RGRSB_1495 PF01891 Cobalt uptake substrate-specific transmembrane region RGRSB_1496 PF08275 DNA primase catalytic core, N-terminal domain RGRSB_1496 PF01807 CHC2 zinc finger RGRSB_1498 PF01960 ArgJ family RGRSB_1502 PF00085 Thioredoxin RGRSB_1503 PF13361 UvrD-like helicase C-terminal domain RGRSB_1503 PF00580 UvrD/REP helicase N-terminal domain RGRSB_1504 PF03061 Thioesterase superfamily RGRSB_1508 PF02617 ATP-dependent Clp protease adaptor protein ClpS RGRSB_1509 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RGRSB_1514 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RGRSB_1516 PF01255 Putative undecaprenyl diphosphate synthase RGRSB_1517 PF02457 DisA bacterial checkpoint controller nucleotide-binding RGRSB_1518 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RGRSB_1518 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RGRSB_1519 PF01242 6-pyruvoyl tetrahydropterin synthase RGRSB_1520 PF13181 Tetratricopeptide repeat RGRSB_1520 PF01435 Peptidase family M48 RGRSB_1521 PF08245 Mur ligase middle domain RGRSB_1521 PF08353 Domain of unknown function (DUF1727) RGRSB_1522 PF00476 DNA polymerase family A RGRSB_1522 PF01367 5'-3' exonuclease, C-terminal SAM fold RGRSB_1522 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RGRSB_1522 PF01612 3'-5' exonuclease RGRSB_1524 PF03330 Lytic transglycolase RGRSB_1526 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RGRSB_1526 PF03466 LysR substrate binding domain RGRSB_1528 PF00535 Glycosyl transferase family 2 RGRSB_1531 PF03960 ArsC family RGRSB_1534 PF04319 NifZ domain RGRSB_1535 PF00682 HMGL-like RGRSB_1538 PF06426 Serine acetyltransferase, N-terminal RGRSB_1538 PF00132 Bacterial transferase hexapeptide (six repeats) RGRSB_1539 PF04055 Radical SAM superfamily RGRSB_1539 PF02579 Dinitrogenase iron-molybdenum cofactor RGRSB_1542 PF01106 NifU-like domain RGRSB_1542 PF04324 BFD-like [2Fe-2S] binding domain RGRSB_1542 PF01592 NifU-like N terminal domain RGRSB_1548 PF02579 Dinitrogenase iron-molybdenum cofactor RGRSB_1549 PF03270 Protein of unknown function, DUF269 RGRSB_1550 PF05082 Rop-like RGRSB_1558 PF07664 Ferrous iron transport protein B C terminus RGRSB_1558 PF07670 Nucleoside recognition RGRSB_1558 PF02421 Ferrous iron transport protein B RGRSB_1558 PF17910 FeoB cytosolic helical domain RGRSB_1560 PF04023 FeoA domain RGRSB_1561 PF08402 TOBE domain RGRSB_1561 PF00005 ABC transporter RGRSB_1562 PF12838 4Fe-4S dicluster domain RGRSB_1566 PF08865 Domain of unknown function (DUF1830) RGRSB_1571 PF00005 ABC transporter RGRSB_1572 PF01435 Peptidase family M48 RGRSB_1575 PF00072 Response regulator receiver domain RGRSB_1575 PF00486 Transcriptional regulatory protein, C terminal RGRSB_1578 PF13439 Glycosyltransferase Family 4 RGRSB_1578 PF00534 Glycosyl transferases group 1 RGRSB_1582 PF01594 AI-2E family transporter RGRSB_1583 PF13361 UvrD-like helicase C-terminal domain RGRSB_1583 PF00580 UvrD/REP helicase N-terminal domain RGRSB_1583 PF12705 PD-(D/E)XK nuclease superfamily RGRSB_1592 PF02547 Queuosine biosynthesis protein RGRSB_1597 PF01266 FAD dependent oxidoreductase RGRSB_1597 PF05690 Thiazole biosynthesis protein ThiG RGRSB_1598 PF01940 Integral membrane protein DUF92 RGRSB_1599 PF03109 ABC1 family RGRSB_1600 PF02325 YGGT family RGRSB_1603 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RGRSB_1604 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RGRSB_1605 PF12838 4Fe-4S dicluster domain RGRSB_1609 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus RGRSB_1613 PF00497 Bacterial extracellular solute-binding proteins, family 3 RGRSB_1615 PF02390 Putative methyltransferase RGRSB_1616 PF00149 Calcineurin-like phosphoesterase RGRSB_1619 PF00475 Imidazoleglycerol-phosphate dehydratase RGRSB_1622 PF00355 Rieske [2Fe-2S] domain RGRSB_1626 PF01256 Carbohydrate kinase RGRSB_1626 PF03853 YjeF-related protein N-terminus RGRSB_1628 PF00291 Pyridoxal-phosphate dependent enzyme RGRSB_1628 PF00571 CBS domain RGRSB_1632 PF01266 FAD dependent oxidoreductase RGRSB_1632 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RGRSB_1636 PF03773 Predicted permease RGRSB_1641 PF00781 Diacylglycerol kinase catalytic domain RGRSB_1642 PF02540 NAD synthase RGRSB_1643 PF04055 Radical SAM superfamily RGRSB_1647 PF08443 RimK-like ATP-grasp domain RGRSB_1647 PF18030 RimK PreATP-grasp domain RGRSB_1649 PF03484 tRNA synthetase B5 domain RGRSB_1649 PF03483 B3/4 domain RGRSB_1649 PF01588 Putative tRNA binding domain RGRSB_1649 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RGRSB_1649 PF03147 Ferredoxin-fold anticodon binding domain RGRSB_1650 PF16363 GDP-mannose 4,6 dehydratase RGRSB_1651 PF14524 Wzt C-terminal domain RGRSB_1651 PF00005 ABC transporter RGRSB_1652 PF01061 ABC-2 type transporter RGRSB_1654 PF17886 HSP20-like domain found in ArsA RGRSB_1654 PF02374 Anion-transporting ATPase RGRSB_1655 PF01040 UbiA prenyltransferase family RGRSB_1657 PF02237 Biotin protein ligase C terminal domain RGRSB_1657 PF03099 Biotin/lipoate A/B protein ligase family RGRSB_1657 PF08279 HTH domain RGRSB_1660 PF07689 KaiB domain RGRSB_1661 PF00793 DAHP synthetase I family RGRSB_1661 PF18152 DAHP synthase ferredoxin-like domain RGRSB_1663 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGRSB_1666 PF00085 Thioredoxin RGRSB_1670 PF00575 S1 RNA binding domain RGRSB_1673 PF01464 Transglycosylase SLT domain RGRSB_1677 PF00586 AIR synthase related protein, N-terminal domain RGRSB_1677 PF02769 AIR synthase related protein, C-terminal domain RGRSB_1678 PF13180 PDZ domain RGRSB_1678 PF02163 Peptidase family M50 RGRSB_1679 PF00633 Helix-hairpin-helix motif RGRSB_1679 PF00730 HhH-GPD superfamily base excision DNA repair protein RGRSB_1683 PF02096 60Kd inner membrane protein RGRSB_1686 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase RGRSB_1687 PF00072 Response regulator receiver domain RGRSB_1687 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RGRSB_1687 PF00512 His Kinase A (phospho-acceptor) domain RGRSB_1687 PF09308 LuxQ, periplasmic RGRSB_1688 PF02514 CobN/Magnesium Chelatase RGRSB_1691 PF01722 BolA-like protein RGRSB_1692 PF00462 Glutaredoxin RGRSB_1694 PF00072 Response regulator receiver domain RGRSB_1694 PF00486 Transcriptional regulatory protein, C terminal RGRSB_1695 PF01593 Flavin containing amine oxidoreductase RGRSB_1697 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RGRSB_1698 PF00574 Clp protease RGRSB_1704 PF16363 GDP-mannose 4,6 dehydratase RGRSB_1705 PF06071 Protein of unknown function (DUF933) RGRSB_1705 PF01926 50S ribosome-binding GTPase RGRSB_1706 PF02567 Phenazine biosynthesis-like protein RGRSB_1707 PF00881 Nitroreductase family RGRSB_1710 PF10742 Protein of unknown function (DUF2555) RGRSB_1712 PF00226 DnaJ domain RGRSB_1712 PF01556 DnaJ C terminal domain RGRSB_1713 PF00012 Hsp70 protein RGRSB_1716 PF00216 Bacterial DNA-binding protein RGRSB_1717 PF07698 7TM receptor with intracellular HD hydrolase RGRSB_1717 PF07697 7TM-HD extracellular RGRSB_1717 PF01966 HD domain RGRSB_1721 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RGRSB_1721 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RGRSB_1721 PF01842 ACT domain RGRSB_1726 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RGRSB_1726 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RGRSB_1727 PF00698 Acyl transferase domain RGRSB_1728 PF01081 KDPG and KHG aldolase RGRSB_1730 PF01924 Hydrogenase formation hypA family RGRSB_1733 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RGRSB_1738 PF01259 SAICAR synthetase RGRSB_1739 PF07244 Surface antigen variable number repeat RGRSB_1739 PF01103 Surface antigen RGRSB_1741 PF00111 2Fe-2S iron-sulfur cluster binding domain RGRSB_1742 PF00459 Inositol monophosphatase family RGRSB_1745 PF00977 Histidine biosynthesis protein RGRSB_1747 PF07685 CobB/CobQ-like glutamine amidotransferase domain RGRSB_1749 PF00486 Transcriptional regulatory protein, C terminal RGRSB_1749 PF00072 Response regulator receiver domain RGRSB_1752 PF00133 tRNA synthetases class I (I, L, M and V) RGRSB_1752 PF08264 Anticodon-binding domain of tRNA RGRSB_1752 PF09334 tRNA synthetases class I (M) RGRSB_1753 PF03144 Elongation factor Tu domain 2 RGRSB_1753 PF00009 Elongation factor Tu GTP binding domain RGRSB_1753 PF03764 Elongation factor G, domain IV RGRSB_1753 PF00679 Elongation factor G C-terminus RGRSB_1753 PF14492 Elongation Factor G, domain II RGRSB_1759 PF01467 Cytidylyltransferase-like RGRSB_1760 PF02397 Bacterial sugar transferase RGRSB_1761 PF00534 Glycosyl transferases group 1 RGRSB_1761 PF13439 Glycosyltransferase Family 4 RGRSB_1762 PF00436 Single-strand binding protein family RGRSB_1764 PF04085 rod shape-determining protein MreC RGRSB_1766 PF01380 SIS domain RGRSB_1768 PF01699 Sodium/calcium exchanger protein RGRSB_1770 PF00350 Dynamin family RGRSB_1773 PF00924 Mechanosensitive ion channel RGRSB_1777 PF17862 AAA+ lid domain RGRSB_1777 PF00004 ATPase family associated with various cellular activities (AAA) RGRSB_1777 PF06480 FtsH Extracellular RGRSB_1777 PF01434 Peptidase family M41 RGRSB_1780 PF00005 ABC transporter RGRSB_1782 PF00795 Carbon-nitrogen hydrolase RGRSB_1783 PF01297 Zinc-uptake complex component A periplasmic RGRSB_1784 PF00005 ABC transporter RGRSB_1785 PF00950 ABC 3 transport family RGRSB_1787 PF02492 CobW/HypB/UreG, nucleotide-binding domain RGRSB_1787 PF07683 Cobalamin synthesis protein cobW C-terminal domain RGRSB_1788 PF01276 Orn/Lys/Arg decarboxylase, major domain RGRSB_1788 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RGRSB_1789 PF01343 Peptidase family S49 RGRSB_1792 PF01098 Cell cycle protein RGRSB_1793 PF01883 Iron-sulfur cluster assembly protein RGRSB_1793 PF10609 NUBPL iron-transfer P-loop NTPase RGRSB_1798 PF00912 Transglycosylase RGRSB_1798 PF00905 Penicillin binding protein transpeptidase domain RGRSB_1801 PF00206 Lyase RGRSB_1801 PF10415 Fumarase C C-terminus RGRSB_1804 PF12826 Helix-hairpin-helix motif RGRSB_1804 PF01653 NAD-dependent DNA ligase adenylation domain RGRSB_1804 PF00533 BRCA1 C Terminus (BRCT) domain RGRSB_1804 PF03120 NAD-dependent DNA ligase OB-fold domain RGRSB_1804 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RGRSB_1807 PF01336 OB-fold nucleic acid binding domain RGRSB_1807 PF00152 tRNA synthetases class II (D, K and N) RGRSB_1811 PF02844 Phosphoribosylglycinamide synthetase, N domain RGRSB_1811 PF02843 Phosphoribosylglycinamide synthetase, C domain RGRSB_1811 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RGRSB_1812 PF06803 Protein of unknown function (DUF1232) RGRSB_1813 PF05199 GMC oxidoreductase RGRSB_1813 PF00732 GMC oxidoreductase RGRSB_1814 PF00510 Cytochrome c oxidase subunit III RGRSB_1815 PF00115 Cytochrome C and Quinol oxidase polypeptide I RGRSB_1816 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RGRSB_1816 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RGRSB_1819 PF07992 Pyridine nucleotide-disulphide oxidoreductase RGRSB_1821 PF01594 AI-2E family transporter RGRSB_1824 PF00875 DNA photolyase RGRSB_1824 PF03441 FAD binding domain of DNA photolyase RGRSB_1825 PF00293 NUDIX domain RGRSB_1826 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RGRSB_1827 PF00270 DEAD/DEAH box helicase RGRSB_1827 PF00271 Helicase conserved C-terminal domain RGRSB_1827 PF17191 RecG wedge domain RGRSB_1828 PF01050 Mannose-6-phosphate isomerase RGRSB_1828 PF00483 Nucleotidyl transferase RGRSB_1831 PF01926 50S ribosome-binding GTPase RGRSB_1832 PF09335 SNARE associated Golgi protein RGRSB_1834 PF00462 Glutaredoxin RGRSB_1836 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RGRSB_1837 PF13249 Squalene-hopene cyclase N-terminal domain RGRSB_1837 PF13243 Squalene-hopene cyclase C-terminal domain RGRSB_1839 PF01266 FAD dependent oxidoreductase RGRSB_1839 PF05690 Thiazole biosynthesis protein ThiG RGRSB_1841 PF01427 D-ala-D-ala dipeptidase RGRSB_1843 PF02151 UvrB/uvrC motif RGRSB_1843 PF08459 UvrC Helix-hairpin-helix N-terminal RGRSB_1843 PF01541 GIY-YIG catalytic domain RGRSB_1843 PF12826 Helix-hairpin-helix motif RGRSB_1844 PF00528 Binding-protein-dependent transport system inner membrane component RGRSB_1846 PF06949 Protein of unknown function (DUF1292) RGRSB_1848 PF01409 tRNA synthetases class II core domain (F) RGRSB_1848 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RGRSB_1861 PF01048 Phosphorylase superfamily RGRSB_1862 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RGRSB_1862 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RGRSB_1865 PF04483 Protein of unknown function (DUF565) RGRSB_1872 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RGRSB_1872 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RGRSB_1873 PF00374 Nickel-dependent hydrogenase RGRSB_1874 PF00483 Nucleotidyl transferase RGRSB_1877 PF00923 Transaldolase/Fructose-6-phosphate aldolase RGRSB_1877 PF13202 EF hand RGRSB_1878 PF00772 DnaB-like helicase N terminal domain RGRSB_1878 PF03796 DnaB-like helicase C terminal domain RGRSB_1878 PF14528 LAGLIDADG-like domain RGRSB_1882 PF02687 FtsX-like permease family RGRSB_1882 PF00005 ABC transporter RGRSB_1882 PF12704 MacB-like periplasmic core domain RGRSB_1884 PF00118 TCP-1/cpn60 chaperonin family RGRSB_1886 PF02075 Crossover junction endodeoxyribonuclease RuvC RGRSB_1887 PF00795 Carbon-nitrogen hydrolase RGRSB_1891 PF01165 Ribosomal protein S21 RGRSB_1894 PF17912 MalK OB fold domain RGRSB_1894 PF00005 ABC transporter RGRSB_1899 PF00664 ABC transporter transmembrane region RGRSB_1899 PF00005 ABC transporter RGRSB_1901 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RGRSB_1902 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RGRSB_1902 PF02222 ATP-grasp domain RGRSB_1905 PF01098 Cell cycle protein RGRSB_1910 PF00266 Aminotransferase class-V RGRSB_1914 PF00753 Metallo-beta-lactamase superfamily RGRSB_1915 PF01925 Sulfite exporter TauE/SafE RGRSB_1916 PF11780 Protein of unknown function (DUF3318) RGRSB_1921 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RGRSB_1921 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RGRSB_1924 PF04055 Radical SAM superfamily RGRSB_1928 PF01168 Alanine racemase, N-terminal domain RGRSB_1928 PF00842 Alanine racemase, C-terminal domain RGRSB_1932 PF00111 2Fe-2S iron-sulfur cluster binding domain RGRSB_1933 PF04107 Glutamate-cysteine ligase family 2(GCS2) RGRSB_1934 PF00588 SpoU rRNA Methylase family RGRSB_1935 PF01551 Peptidase family M23 RGRSB_1937 PF01475 Ferric uptake regulator family RGRSB_1938 PF00072 Response regulator receiver domain RGRSB_1938 PF12452 Protein of unknown function (DUF3685) RGRSB_1939 PF00004 ATPase family associated with various cellular activities (AAA) RGRSB_1939 PF01434 Peptidase family M41 RGRSB_1939 PF17862 AAA+ lid domain RGRSB_1941 PF00543 Nitrogen regulatory protein P-II RGRSB_1943 PF00085 Thioredoxin RGRSB_1944 PF04012 PspA/IM30 family RGRSB_1945 PF04012 PspA/IM30 family RGRSB_1949 PF01595 Cyclin M transmembrane N-terminal domain RGRSB_1949 PF03471 Transporter associated domain RGRSB_1949 PF00571 CBS domain RGRSB_1950 PF00343 Carbohydrate phosphorylase RGRSB_1951 PF01628 HrcA protein C terminal domain