I862_00005 PF00308 Bacterial dnaA protein I862_00005 PF08299 Bacterial dnaA protein helix-turn-helix I862_00005 PF11638 DnaA N-terminal domain I862_00015 PF00318 Ribosomal protein S2 I862_00020 PF00889 Elongation factor TS I862_00025 PF00696 Amino acid kinase family I862_00030 PF01765 Ribosome recycling factor I862_00040 PF00075 RNase H I862_00045 PF09360 Iron-binding zinc finger CDGSH type I862_00050 PF03572 Peptidase family S41 I862_00050 PF13180 PDZ domain I862_00055 PF13905 Thioredoxin-like I862_00065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal I862_00065 PF07559 Flagellar basal body protein FlaE I862_00070 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) I862_00075 PF01678 Diaminopimelate epimerase I862_00085 PF11160 I862_00085 I862_00090 PF02653 I862_00090 I862_00095 PF00005 ABC transporter I862_00100 PF04392 ABC transporter substrate binding protein I862_00110 PF00892 EamA-like transporter family I862_00115 PF00892 EamA-like transporter family I862_00120 PF00512 His Kinase A (phospho-acceptor) domain I862_00120 PF00672 HAMP domain I862_00120 PF00989 PAS fold I862_00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_00125 PF02355 Protein export membrane protein I862_00125 PF07549 SecD/SecF GG Motif I862_00130 PF12804 MobA-like NTP transferase domain I862_00135 PF00132 Bacterial transferase hexapeptide (six repeats) I862_00135 PF14602 Hexapeptide repeat of succinyl-transferase I862_00150 PF00474 Sodium:solute symporter family I862_00150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_00155 PF07728 AAA domain (dynein-related subfamily) I862_00155 PF08406 I862_00155 I862_00160 PF00158 Sigma-54 interaction domain I862_00160 PF02954 Bacterial regulatory protein, Fis family I862_00170 PF00712 DNA polymerase III beta subunit, N-terminal domain I862_00170 PF02767 DNA polymerase III beta subunit, central domain I862_00170 PF02768 DNA polymerase III beta subunit, C-terminal domain I862_00175 PF13304 AAA domain I862_00180 PF00156 Phosphoribosyl transferase domain I862_00195 PF06723 MreB/Mbl protein I862_00200 PF07521 RNA-metabolising metallo-beta-lactamase I862_00200 PF12706 Beta-lactamase superfamily domain I862_00205 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain I862_00205 PF03900 Porphobilinogen deaminase, C-terminal domain I862_00215 PF02245 Methylpurine-DNA glycosylase (MPG) I862_00225 PF01988 I862_00225 I862_00230 PF01649 Ribosomal protein S20 I862_00235 PF13231 I862_00235 I862_00240 PF01569 PAP2 superfamily I862_00245 PF13437 HlyD family secretion protein I862_00245 PF13533 Biotin-lipoyl like I862_00250 PF07690 Major Facilitator Superfamily I862_00255 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain I862_00255 PF06827 Zinc finger found in FPG and IleRS I862_00255 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain I862_00260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain I862_00260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain I862_00260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain I862_00265 PF01119 DNA mismatch repair protein, C-terminal domain I862_00265 PF08676 MutL C terminal dimerisation domain I862_00265 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_00275 PF02618 YceG-like family I862_00280 PF00109 Beta-ketoacyl synthase, N-terminal domain I862_00280 PF02801 Beta-ketoacyl synthase, C-terminal domain I862_00285 PF00550 Phosphopantetheine attachment site I862_00290 PF00146 NADH dehydrogenase I862_00305 PF13302 Acetyltransferase (GNAT) domain I862_00310 PF01025 GrpE I862_00315 PF00056 lactate/malate dehydrogenase, NAD binding domain I862_00315 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain I862_00320 PF07859 alpha/beta hydrolase fold I862_00325 PF12796 Ankyrin repeats (3 copies) I862_00330 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family I862_00335 PF06414 Zeta toxin I862_00340 PF03739 I862_00340 I862_00345 PF00004 ATPase family associated with various cellular activities (AAA) I862_00345 PF02861 Clp amino terminal domain I862_00345 PF07724 AAA domain (Cdc48 subfamily) I862_00345 PF10431 C-terminal, D2-small domain, of ClpB protein I862_00350 PF13673 Acetyltransferase (GNAT) domain I862_00355 PF09537 Domain of unknown function (DUF2383) I862_00360 PF10116 I862_00360 I862_00375 PF02537 I862_00375 I862_00380 PF01545 Cation efflux family I862_00385 PF01258 Prokaryotic dksA/traR C4-type zinc finger I862_00395 PF00300 Histidine phosphatase superfamily (branch 1) I862_00400 PF00009 Elongation factor Tu GTP binding domain I862_00400 PF00679 Elongation factor G C-terminus I862_00400 PF03144 Elongation factor Tu domain 2 I862_00405 PF01292 Prokaryotic cytochrome b561 I862_00410 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain I862_00410 PF00364 Biotin-requiring enzyme I862_00410 PF02785 Biotin carboxylase C-terminal domain I862_00410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain I862_00420 PF01636 Phosphotransferase enzyme family I862_00425 PF13242 HAD-hyrolase-like I862_00425 PF13344 Haloacid dehalogenase-like hydrolase I862_00430 PF02683 I862_00430 I862_00430 PF11412 Disulphide bond corrector protein DsbC I862_00430 PF13899 Thioredoxin-like I862_00440 PF00953 Glycosyl transferase family 4 I862_00450 PF01702 Queuine tRNA-ribosyltransferase I862_00455 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase I862_00455 PF12801 I862_00455 I862_00455 PF13746 4Fe-4S dicluster domain I862_00460 PF02600 Disulfide bond formation protein DsbB I862_00465 PF03232 I862_00465 I862_00470 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB I862_00475 PF01636 Phosphotransferase enzyme family I862_00480 PF01464 Transglycosylase SLT domain I862_00485 PF01066 CDP-alcohol phosphatidyltransferase I862_00485 PF08009 I862_00485 I862_00490 PF02666 I862_00490 I862_00495 PF03641 Possible lysine decarboxylase I862_00500 PF01113 Dihydrodipicolinate reductase, N-terminus I862_00500 PF05173 Dihydrodipicolinate reductase, C-terminus I862_00510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region I862_00510 PF01872 RibD C-terminal domain I862_00515 PF00677 Lumazine binding domain I862_00520 PF00925 GTP cyclohydrolase II I862_00520 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase I862_00525 PF00885 6,7-dimethyl-8-ribityllumazine synthase I862_00540 PF00043 Glutathione S-transferase, C-terminal domain I862_00540 PF02798 Glutathione S-transferase, N-terminal domain I862_00545 PF04107 Glutamate-cysteine ligase family 2(GCS2) I862_00550 PF13449 Esterase-like activity of phytase I862_00555 PF01863 Protein of unknown function DUF45 I862_00560 PF04229 GrpB protein I862_00560 PF13673 Acetyltransferase (GNAT) domain I862_00570 PF06689 ClpX C4-type zinc finger I862_00570 PF07724 AAA domain (Cdc48 subfamily) I862_00570 PF10431 C-terminal, D2-small domain, of ClpB protein I862_00575 PF00574 Clp protease I862_00580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase I862_00580 PF05697 Bacterial trigger factor protein (TF) I862_00580 PF05698 Bacterial trigger factor protein (TF) C-terminus I862_00585 PF00122 E1-E2 ATPase I862_00585 PF00403 Heavy-metal-associated domain I862_00585 PF00702 haloacid dehalogenase-like hydrolase I862_00585 PF12156 I862_00585 I862_00590 PF13419 Haloacid dehalogenase-like hydrolase I862_00610 PF04002 RadC-like JAB domain I862_00615 PF01039 Carboxyl transferase domain I862_00635 PF00005 ABC transporter I862_00640 PF02223 Thymidylate kinase I862_00645 PF06150 ChaB I862_00650 PF00005 ABC transporter I862_00660 PF04972 BON domain I862_00665 PF04972 BON domain I862_00670 PF00107 Zinc-binding dehydrogenase I862_00675 PF02050 Flagellar FliJ protein I862_00680 PF00483 Nucleotidyl transferase I862_00685 PF01636 Phosphotransferase enzyme family I862_00690 PF08534 Redoxin I862_00695 PF03099 Biotin/lipoate A/B protein ligase family I862_00705 PF08241 Methyltransferase domain I862_00710 PF00140 Sigma-70 factor, region 1 I862_00710 PF04542 Sigma-70 region 2 I862_00710 PF04545 Sigma-70, region 4 I862_00715 PF03167 Uracil DNA glycosylase superfamily I862_00725 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase I862_00725 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal I862_00725 PF13288 DXP reductoisomerase C-terminal domain I862_00730 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase I862_00735 PF01148 Cytidylyltransferase family I862_00740 PF01255 Putative undecaprenyl diphosphate synthase I862_00745 PF00483 Nucleotidyl transferase I862_00745 PF00580 UvrD/REP helicase N-terminal domain I862_00745 PF13361 UvrD-like helicase C-terminal domain I862_00755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I862_00755 PF07992 Pyridine nucleotide-disulphide oxidoreductase I862_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) I862_00765 PF00364 Biotin-requiring enzyme I862_00765 PF02817 e3 binding domain I862_00770 PF00676 Dehydrogenase E1 component I862_00770 PF02779 Transketolase, pyrimidine binding domain I862_00770 PF16078 I862_00770 I862_00770 PF16870 I862_00770 I862_00775 PF13520 Amino acid permease I862_00780 PF00011 Hsp20/alpha crystallin family I862_00785 PF00375 Sodium:dicarboxylate symporter family I862_00795 PF00456 Transketolase, thiamine diphosphate binding domain I862_00795 PF02779 Transketolase, pyrimidine binding domain I862_00795 PF02780 Transketolase, C-terminal domain I862_00805 PF00580 UvrD/REP helicase N-terminal domain I862_00805 PF12705 PD-(D/E)XK nuclease superfamily I862_00805 PF13361 UvrD-like helicase C-terminal domain I862_00810 PF05114 Protein of unknown function (DUF692) I862_00815 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) I862_00820 PF01411 tRNA synthetases class II (A) I862_00820 PF02272 DHHA1 domain I862_00820 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain I862_00835 PF00032 Cytochrome b(C-terminal)/b6/petD I862_00835 PF00033 Cytochrome b(N-terminal)/b6/petB I862_00840 PF00355 Rieske [2Fe-2S] domain I862_00840 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal I862_00845 PF16363 I862_00845 I862_00855 PF00477 I862_00855 I862_00860 PF00226 DnaJ domain I862_00860 PF12796 Ankyrin repeats (3 copies) I862_00870 PF04070 I862_00870 I862_00885 PF01734 Patatin-like phospholipase I862_00890 PF00210 Ferritin-like domain I862_00895 PF02033 Ribosome-binding factor A I862_00900 PF00009 Elongation factor Tu GTP binding domain I862_00900 PF04760 Translation initiation factor IF-2, N-terminal region I862_00900 PF11987 Translation-initiation factor 2 I862_00910 PF00575 S1 RNA binding domain I862_00910 PF08529 NusA N-terminal domain I862_00910 PF13184 NusA-like KH domain I862_00910 PF14520 Helix-hairpin-helix domain I862_00915 PF02576 Uncharacterised BCR, YhbC family COG0779 I862_00915 PF17384 I862_00915 I862_00920 PF00459 Inositol monophosphatase family I862_00925 PF02779 Transketolase, pyrimidine binding domain I862_00925 PF02780 Transketolase, C-terminal domain I862_00925 PF13292 1-deoxy-D-xylulose-5-phosphate synthase I862_00930 PF13673 Acetyltransferase (GNAT) domain I862_00940 PF09825 I862_00940 I862_00945 PF00474 Sodium:solute symporter family I862_00945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_00950 PF05618 Putative ATP-dependant zinc protease I862_00950 PF08443 RimK-like ATP-grasp domain I862_00955 PF00814 Glycoprotease family I862_00960 PF04972 BON domain I862_00965 PF00226 DnaJ domain I862_00970 PF03190 Protein of unknown function, DUF255 I862_00980 PF00355 Rieske [2Fe-2S] domain I862_00980 PF01266 FAD dependent oxidoreductase I862_00985 PF01738 Dienelactone hydrolase family I862_00990 PF01814 Hemerythrin HHE cation binding domain I862_01005 PF10025 Uncharacterized conserved protein (DUF2267) I862_01015 PF00293 NUDIX domain I862_01025 PF00589 Phage integrase family I862_01025 PF02899 Phage integrase, N-terminal SAM-like domain I862_01030 PF01312 FlhB HrpN YscU SpaS Family I862_01035 PF01311 I862_01035 I862_01040 PF02599 Global regulator protein family I862_01045 PF05050 Methyltransferase FkbM domain I862_01050 PF00330 Aconitase family (aconitate hydratase) I862_01050 PF00694 Aconitase C-terminal domain I862_01055 PF00326 Prolyl oligopeptidase family I862_01055 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain I862_01060 PF12796 Ankyrin repeats (3 copies) I862_01075 PF03548 Outer membrane lipoprotein carrier protein LolA I862_01080 PF13116 I862_01080 I862_01080 PF13502 I862_01080 I862_01095 PF01327 Polypeptide deformylase I862_01100 PF00472 RF-1 domain I862_01100 PF03462 PCRF domain I862_01105 PF01098 I862_01105 I862_01110 PF01098 I862_01110 I862_01115 PF07722 Peptidase C26 I862_01120 PF00313 'Cold-shock' DNA-binding domain I862_01125 PF00270 DEAD/DEAH box helicase I862_01125 PF00271 Helicase conserved C-terminal domain I862_01135 PF13505 Outer membrane protein beta-barrel domain I862_01150 PF00216 Bacterial DNA-binding protein I862_01155 PF01343 Peptidase family S49 I862_01165 PF02627 Carboxymuconolactone decarboxylase family I862_01170 PF00905 Penicillin binding protein transpeptidase domain I862_01175 PF00171 Aldehyde dehydrogenase family I862_01180 PF04052 TolB amino-terminal domain I862_01180 PF07676 WD40-like Beta Propeller Repeat I862_01185 PF01361 Tautomerase enzyme I862_01190 PF00521 DNA gyrase/topoisomerase IV, subunit A I862_01190 PF03989 DNA gyrase C-terminal domain, beta-propeller I862_01195 PF13180 PDZ domain I862_01195 PF13365 Trypsin-like peptidase domain I862_01205 PF01926 50S ribosome-binding GTPase I862_01205 PF07650 KH domain I862_01210 PF00035 Double-stranded RNA binding motif I862_01210 PF14622 Ribonuclease-III-like I862_01215 PF00717 Peptidase S24-like I862_01220 PF02016 LD-carboxypeptidase I862_01230 PF06242 I862_01230 I862_01235 PF14437 I862_01235 I862_01240 PF07690 Major Facilitator Superfamily I862_01245 PF00883 Cytosol aminopeptidase family, catalytic domain I862_01245 PF02789 Cytosol aminopeptidase family, N-terminal domain I862_01255 PF02592 I862_01255 I862_01260 PF00005 ABC transporter I862_01260 PF16326 I862_01260 I862_01265 PF04402 Protein of unknown function (DUF541) I862_01270 PF00849 RNA pseudouridylate synthase I862_01270 PF01479 S4 domain I862_01275 PF07722 Peptidase C26 I862_01280 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase I862_01285 PF01475 Ferric uptake regulator family I862_01295 PF01266 FAD dependent oxidoreductase I862_01295 PF05430 S-adenosyl-L-methionine-dependent methyltransferase I862_01305 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family I862_01310 PF00072 Response regulator receiver domain I862_01310 PF00486 Transcriptional regulatory protein, C terminal I862_01315 PF02686 Glu-tRNAGln amidotransferase C subunit I862_01320 PF03652 Uncharacterised protein family (UPF0081) I862_01330 PF01225 Mur ligase family, catalytic domain I862_01330 PF02875 Mur ligase family, glutamate ligase domain I862_01330 PF08245 Mur ligase middle domain I862_01335 PF00009 Elongation factor Tu GTP binding domain I862_01335 PF00679 Elongation factor G C-terminus I862_01335 PF03144 Elongation factor Tu domain 2 I862_01335 PF06421 GTP-binding protein LepA C-terminus I862_01355 PF10090 Uncharacterized protein conserved in bacteria (DUF2328) I862_01360 PF00271 Helicase conserved C-terminal domain I862_01360 PF01043 SecA preprotein cross-linking domain I862_01360 PF02810 SEC-C motif I862_01360 PF07516 SecA Wing and Scaffold domain I862_01360 PF07517 SecA DEAD-like domain I862_01385 PF12705 PD-(D/E)XK nuclease superfamily I862_01385 PF13361 UvrD-like helicase C-terminal domain I862_01390 PF00892 EamA-like transporter family I862_01395 PF00268 Ribonucleotide reductase, small chain I862_01405 PF01061 I862_01405 I862_01410 PF00005 ABC transporter I862_01420 PF05159 I862_01420 I862_01425 PF05159 I862_01425 I862_01440 PF01513 ATP-NAD kinase I862_01445 PF01713 Smr domain I862_01450 PF02602 Uroporphyrinogen-III synthase HemD I862_01455 PF01715 IPP transferase I862_01465 PF01618 I862_01465 I862_01470 PF02472 Biopolymer transport protein ExbD/TolR I862_01475 PF13103 TonB C terminal I862_01485 PF13502 I862_01485 I862_01495 PF08245 Mur ligase middle domain I862_01500 PF00793 DAHP synthetase I family I862_01505 PF01668 SmpB protein I862_01510 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase I862_01520 PF03547 I862_01520 I862_01525 PF10768 I862_01525 I862_01530 PF00384 Molybdopterin oxidoreductase I862_01530 PF09326 I862_01530 I862_01530 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region I862_01530 PF13510 2Fe-2S iron-sulfur cluster binding domain I862_01535 PF03358 NADPH-dependent FMN reductase I862_01540 PF07690 Major Facilitator Superfamily I862_01545 PF00749 tRNA synthetases class I (E and Q), catalytic domain I862_01555 PF05175 Methyltransferase small domain I862_01560 PF01812 5-formyltetrahydrofolate cyclo-ligase family I862_01565 PF00072 Response regulator receiver domain I862_01565 PF00486 Transcriptional regulatory protein, C terminal I862_01570 PF01381 Helix-turn-helix I862_01575 PF00795 Carbon-nitrogen hydrolase I862_01580 PF04748 Divergent polysaccharide deacetylase I862_01585 PF10098 I862_01585 I862_01590 PF04380 I862_01590 I862_01595 PF01790 I862_01595 I862_01600 PF07963 Prokaryotic N-terminal methylation motif I862_01610 PF06271 I862_01610 I862_01615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) I862_01615 PF02403 Seryl-tRNA synthetase N-terminal domain I862_01620 PF00902 Sec-independent protein translocase protein (TatC) I862_01635 PF05164 Cell division protein ZapA I862_01655 PF01541 GIY-YIG catalytic domain I862_01655 PF02151 UvrB/uvrC motif I862_01655 PF08459 UvrC Helix-hairpin-helix N-terminal I862_01655 PF12826 Helix-hairpin-helix motif I862_01660 PF01066 CDP-alcohol phosphatidyltransferase I862_01665 PF00805 Pentapeptide repeats (8 copies) I862_01670 PF13437 HlyD family secretion protein I862_01675 PF00005 ABC transporter I862_01675 PF00664 ABC transporter transmembrane region I862_01680 PF13505 Outer membrane protein beta-barrel domain I862_01685 PF13505 Outer membrane protein beta-barrel domain I862_01690 PF13505 Outer membrane protein beta-barrel domain I862_01700 PF04800 ETC complex I subunit conserved region I862_01705 PF02609 Exonuclease VII small subunit I862_01710 PF05159 I862_01710 I862_01710 PF10111 Glycosyltransferase like family 2 I862_01720 PF01230 HIT domain I862_01725 PF06258 I862_01725 I862_01730 PF06258 I862_01730 I862_01735 PF00830 Ribosomal L28 family I862_01740 PF01764 Lipase (class 3) I862_01755 PF13673 Acetyltransferase (GNAT) domain I862_01760 PF00072 Response regulator receiver domain I862_01765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_01770 PF04577 I862_01770 I862_01780 PF00749 tRNA synthetases class I (E and Q), catalytic domain I862_01785 PF00482 Type II secretion system (T2SS), protein F I862_01790 PF00437 Type II/IV secretion system protein I862_01790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain I862_01800 PF01416 tRNA pseudouridine synthase I862_01805 PF01368 DHH family I862_01805 PF02272 DHHA1 domain I862_01810 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus I862_01810 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus I862_01815 PF13637 Ankyrin repeats (many copies) I862_01820 PF00155 Aminotransferase class I and II I862_01830 PF03129 Anticodon binding domain I862_01830 PF13393 Histidyl-tRNA synthetase I862_01835 PF09140 ATPase MipZ I862_01840 PF00717 Peptidase S24-like I862_01845 PF12796 Ankyrin repeats (3 copies) I862_01850 PF00817 impB/mucB/samB family I862_01850 PF11799 impB/mucB/samB family C-terminal domain I862_01850 PF13438 I862_01850 I862_01855 PF00717 Peptidase S24-like I862_01860 PF00023 Ankyrin repeat I862_01860 PF12796 Ankyrin repeats (3 copies) I862_01865 PF07798 I862_01865 I862_01870 PF02491 SHS2 domain inserted in FTSA I862_01870 PF14450 Cell division protein FtsA I862_01875 PF03799 Cell division protein FtsQ I862_01875 PF08478 POTRA domain, FtsQ-type I862_01880 PF01820 D-ala D-ala ligase N-terminus I862_01880 PF07478 D-ala D-ala ligase C-terminus I862_01885 PF00120 Glutamine synthetase, catalytic domain I862_01890 PF00085 Thioredoxin I862_01895 PF01176 Translation initiation factor 1A / IF-1 I862_01900 PF02545 Maf-like protein I862_01910 PF00549 CoA-ligase I862_01910 PF08442 ATP-grasp domain I862_01915 PF00549 CoA-ligase I862_01915 PF02629 CoA binding domain I862_01920 PF03602 Conserved hypothetical protein 95 I862_01925 PF00589 Phage integrase family I862_01925 PF13356 Domain of unknown function (DUF4102) I862_01925 PF14659 Phage integrase, N-terminal SAM-like domain I862_01930 PF13276 I862_01930 I862_01930 PF13683 I862_01930 I862_01935 PF01527 Transposase I862_01940 PF01476 LysM domain I862_01960 PF12305 I862_01960 I862_01975 PF01476 LysM domain I862_01985 PF01476 LysM domain I862_01990 PF13276 I862_01990 I862_01990 PF13683 I862_01990 I862_01995 PF01527 Transposase I862_02000 PF13276 I862_02000 I862_02005 PF01527 Transposase I862_02010 PF13612 I862_02010 I862_02020 PF13714 Phosphoenolpyruvate phosphomutase I862_02035 PF13612 I862_02035 I862_02040 PF02441 Flavoprotein I862_02055 PF01202 Shikimate kinase I862_02060 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase I862_02065 PF11019 I862_02065 I862_02070 PF00892 EamA-like transporter family I862_02075 PF00665 Integrase core domain I862_02080 PF12796 Ankyrin repeats (3 copies) I862_02080 PF13857 Ankyrin repeats (many copies) I862_02085 PF13516 Leucine Rich repeat I862_02090 PF00665 Integrase core domain I862_02090 PF13276 I862_02090 I862_02095 PF01527 Transposase I862_02100 PF01527 Transposase I862_02105 PF00665 Integrase core domain I862_02105 PF13276 I862_02105 I862_02110 PF01839 FG-GAP repeat I862_02115 PF00476 DNA polymerase family A I862_02115 PF01367 5'-3' exonuclease, C-terminal SAM fold I862_02115 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain I862_02120 PF00924 Mechanosensitive ion channel I862_02125 PF13462 Thioredoxin I862_02130 PF01138 3' exoribonuclease family, domain 1 I862_02130 PF03725 3' exoribonuclease family, domain 2 I862_02135 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) I862_02140 PF02559 CarD-like/TRCF domain I862_02145 PF16868 I862_02145 I862_02165 PF14441 I862_02165 I862_02170 PF10092 I862_02170 I862_02175 PF03116 I862_02175 I862_02180 PF00293 NUDIX domain I862_02195 PF00512 His Kinase A (phospho-acceptor) domain I862_02195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_02200 PF00588 SpoU rRNA Methylase family I862_02200 PF08032 RNA 2'-O ribose methyltransferase substrate binding I862_02205 PF06835 Lipopolysaccharide-assembly, LptC-related I862_02210 PF00571 CBS domain I862_02210 PF01380 SIS domain I862_02215 PF13637 Ankyrin repeats (many copies) I862_02220 PF12796 Ankyrin repeats (3 copies) I862_02225 PF01909 Nucleotidyltransferase domain I862_02235 PF01741 Large-conductance mechanosensitive channel, MscL I862_02240 PF14526 Integron-associated effector binding protein I862_02245 PF00583 Acetyltransferase (GNAT) family I862_02255 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit I862_02260 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 I862_02265 PF00111 2Fe-2S iron-sulfur cluster binding domain I862_02270 PF02699 Preprotein translocase subunit I862_02275 PF13847 Methyltransferase domain I862_02280 PF01106 NifU-like domain I862_02280 PF08712 Scaffold protein Nfu/NifU N terminal I862_02285 PF00691 OmpA family I862_02285 PF13677 I862_02285 I862_02290 PF01618 I862_02290 I862_02295 PF00939 Sodium:sulfate symporter transmembrane region I862_02300 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel I862_02305 PF03135 I862_02305 I862_02320 PF00091 Tubulin/FtsZ family, GTPase domain I862_02320 PF12327 FtsZ family, C-terminal domain I862_02325 PF07963 Prokaryotic N-terminal methylation motif I862_02335 PF13547 I862_02335 I862_02335 PF13550 I862_02335 I862_02345 PF00448 SRP54-type protein, GTPase domain I862_02345 PF02881 SRP54-type protein, helical bundle domain I862_02350 PF00448 SRP54-type protein, GTPase domain I862_02355 PF02205 WH2 motif I862_02360 PF10142 PhoPQ-activated pathogenicity-related protein I862_02360 PF12146 Putative lysophospholipase I862_02365 PF07992 Pyridine nucleotide-disulphide oxidoreductase I862_02370 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain I862_02370 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain I862_02375 PF03631 I862_02375 I862_02380 PF00023 Ankyrin repeat I862_02380 PF12796 Ankyrin repeats (3 copies) I862_02385 PF07963 Prokaryotic N-terminal methylation motif I862_02390 PF03372 Endonuclease/Exonuclease/phosphatase family I862_02395 PF04754 I862_02395 I862_02400 PF04754 I862_02400 I862_02410 PF00271 Helicase conserved C-terminal domain I862_02410 PF02151 UvrB/uvrC motif I862_02410 PF04851 Type III restriction enzyme, res subunit I862_02410 PF12344 Ultra-violet resistance protein B I862_02425 PF01926 50S ribosome-binding GTPase I862_02430 PF13516 Leucine Rich repeat I862_02435 PF00999 Sodium/hydrogen exchanger family I862_02435 PF02254 TrkA-N domain I862_02440 PF00106 short chain dehydrogenase I862_02445 PF02132 RecR protein I862_02445 PF13662 Toprim domain I862_02455 PF12796 Ankyrin repeats (3 copies) I862_02460 PF03023 I862_02460 I862_02465 PF01245 Ribosomal protein L19 I862_02470 PF01746 tRNA (Guanine-1)-methyltransferase I862_02475 PF01782 RimM N-terminal domain I862_02475 PF05239 PRC-barrel domain I862_02480 PF00886 Ribosomal protein S16 I862_02485 PF13637 Ankyrin repeats (many copies) I862_02490 PF12796 Ankyrin repeats (3 copies) I862_02500 PF01883 Domain of unknown function DUF59 I862_02500 PF10609 ParA/MinD ATPase like I862_02505 PF01145 SPFH domain / Band 7 family I862_02505 PF12221 I862_02505 I862_02510 PF01145 SPFH domain / Band 7 family I862_02515 PF04384 Iron-sulphur cluster assembly I862_02525 PF01786 Alternative oxidase I862_02535 PF02082 Transcriptional regulator I862_02545 PF03379 I862_02545 I862_02550 PF00005 ABC transporter I862_02555 PF00005 ABC transporter I862_02555 PF00664 ABC transporter transmembrane region I862_02560 PF10150 Ribonuclease E/G family I862_02565 PF01612 3'-5' exonuclease I862_02570 PF01195 Peptidyl-tRNA hydrolase I862_02575 PF01926 50S ribosome-binding GTPase I862_02575 PF06071 Protein of unknown function (DUF933) I862_02595 PF01494 FAD binding domain I862_02600 PF01722 BolA-like protein I862_02605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain I862_02605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I I862_02605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II I862_02605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III I862_02610 PF01435 Peptidase family M48 I862_02620 PF01740 STAS domain I862_02625 PF00072 Response regulator receiver domain I862_02625 PF00990 GGDEF domain I862_02630 PF00072 Response regulator receiver domain I862_02635 PF01171 PP-loop family I862_02640 PF00309 I862_02640 I862_02640 PF04552 Sigma-54, DNA binding domain I862_02640 PF04963 Sigma-54 factor, core binding domain I862_02645 PF00834 Ribulose-phosphate 3 epimerase family I862_02650 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded I862_02665 PF00180 Isocitrate/isopropylmalate dehydrogenase I862_02670 PF03033 Glycosyltransferase family 28 N-terminal domain I862_02670 PF04101 Glycosyltransferase family 28 C-terminal domain I862_02675 PF03477 ATP cone domain I862_02685 PF00849 RNA pseudouridylate synthase I862_02700 PF00578 AhpC/TSA family I862_02705 PF04932 I862_02705 I862_02710 PF04134 I862_02710 I862_02725 PF09356 I862_02725 I862_02725 PF09931 I862_02725 I862_02730 PF09343 I862_02730 I862_02770 PF05521 Phage head-tail joining protein I862_02775 PF05135 Phage gp6-like head-tail connector protein I862_02780 PF05065 Phage capsid family I862_02785 PF04586 I862_02785 I862_02795 PF01878 EVE domain I862_02800 PF04860 Phage portal protein I862_02805 PF06213 I862_02805 I862_02805 PF11775 I862_02805 I862_02810 PF06965 Na+/H+ antiporter 1 I862_02820 PF00873 AcrB/AcrD/AcrF family I862_02825 PF13533 Biotin-lipoyl like I862_02835 PF10097 I862_02835 I862_02840 PF12860 I862_02840 I862_02845 PF00107 Zinc-binding dehydrogenase I862_02845 PF08240 Alcohol dehydrogenase GroES-like domain I862_02850 PF00675 Insulinase (Peptidase family M16) I862_02850 PF05193 Peptidase M16 inactive domain I862_02855 PF13302 Acetyltransferase (GNAT) domain I862_02865 PF00390 Malic enzyme, N-terminal domain I862_02865 PF01515 Phosphate acetyl/butaryl transferase I862_02865 PF03949 Malic enzyme, NAD binding domain I862_02870 PF00037 4Fe-4S binding domain I862_02870 PF11953 Domain of unknown function (DUF3470) I862_02875 PF00885 6,7-dimethyl-8-ribityllumazine synthase I862_02880 PF01029 NusB family I862_02885 PF03597 I862_02885 I862_02890 PF02565 Recombination protein O C terminal I862_02890 PF11967 Recombination protein O N terminal I862_02895 PF00892 EamA-like transporter family I862_02900 PF00216 Bacterial DNA-binding protein I862_02905 PF00132 Bacterial transferase hexapeptide (six repeats) I862_02910 PF01131 DNA topoisomerase I862_02910 PF01396 I862_02910 I862_02910 PF01751 Toprim domain I862_02910 PF13368 I862_02910 I862_02915 PF00589 Phage integrase family I862_02915 PF02899 Phage integrase, N-terminal SAM-like domain I862_02925 PF01300 Telomere recombination I862_02930 PF10276 Zinc-finger domain I862_02935 PF02237 Biotin protein ligase C terminal domain I862_02935 PF16917 I862_02935 I862_02940 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains I862_02945 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains I862_02945 PF01059 I862_02945 I862_02950 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains I862_02950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus I862_02955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L I862_02960 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 I862_02980 PF13458 Periplasmic binding protein I862_02985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases I862_03000 PF11387 I862_03000 I862_03005 PF12796 Ankyrin repeats (3 copies) I862_03005 PF13857 Ankyrin repeats (many copies) I862_03010 PF13737 I862_03010 I862_03030 PF02661 Fic/DOC family I862_03030 PF13776 I862_03030 I862_03035 PF03073 TspO/MBR family I862_03040 PF00239 Resolvase, N terminal domain I862_03045 PF00665 Integrase core domain I862_03045 PF13276 I862_03045 I862_03050 PF01527 Transposase I862_03055 PF11459 I862_03055 I862_03060 PF00005 ABC transporter I862_03065 PF02405 I862_03065 I862_03070 PF00842 Alanine racemase, C-terminal domain I862_03070 PF01168 Alanine racemase, N-terminal domain I862_03075 PF01510 N-acetylmuramoyl-L-alanine amidase I862_03080 PF01209 ubiE/COQ5 methyltransferase family I862_03095 PF09012 FeoC like transcriptional regulator I862_03100 PF02421 Ferrous iron transport protein B I862_03100 PF07664 I862_03100 I862_03100 PF07670 Nucleoside recognition I862_03105 PF04023 FeoA domain I862_03120 PF00890 FAD binding domain I862_03120 PF02910 Fumarate reductase flavoprotein C-term I862_03125 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit I862_03130 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit I862_03140 PF13609 Gram-negative porin I862_03145 PF13609 Gram-negative porin I862_03150 PF01207 Dihydrouridine synthase (Dus) I862_03155 PF02646 I862_03155 I862_03180 PF01330 RuvA N terminal domain I862_03180 PF07499 RuvA, C-terminal domain I862_03180 PF14520 Helix-hairpin-helix domain I862_03195 PF01148 Cytidylyltransferase family I862_03205 PF01052 Surface presentation of antigens (SPOA) I862_03210 PF02108 I862_03210 I862_03215 PF01706 FliG C-terminal domain I862_03215 PF14841 FliG middle domain I862_03215 PF14842 FliG N-terminal domain I862_03220 PF01514 Secretory protein of YscJ/FliF family I862_03220 PF08345 I862_03220 I862_03225 PF12796 Ankyrin repeats (3 copies) I862_03235 PF13231 I862_03235 I862_03245 PF02511 Thymidylate synthase complementing protein I862_03250 PF02824 TGS domain I862_03250 PF04607 Region found in RelA / SpoT proteins I862_03250 PF13291 ACT domain I862_03250 PF13328 HD domain I862_03255 PF05656 I862_03255 I862_03260 PF05656 I862_03260 I862_03265 PF07167 I862_03265 I862_03275 PF00311 Phosphoenolpyruvate carboxylase I862_03280 PF04279 I862_03280 I862_03285 PF09839 I862_03285 I862_03295 PF02355 Protein export membrane protein I862_03295 PF07549 SecD/SecF GG Motif I862_03300 PF13520 Amino acid permease I862_03305 PF12796 Ankyrin repeats (3 copies) I862_03310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region I862_03315 PF02567 Phenazine biosynthesis-like protein I862_03320 PF03562 MltA specific insert domain I862_03320 PF06725 3D domain I862_03325 PF04280 Tim44-like domain I862_03330 PF02556 Preprotein translocase subunit SecB I862_03335 PF01313 I862_03335 I862_03340 PF01258 Prokaryotic dksA/traR C4-type zinc finger I862_03350 PF00117 Glutamine amidotransferase class-I I862_03350 PF06418 CTP synthase N-terminus I862_03355 PF03840 Preprotein translocase SecG subunit I862_03360 PF04977 Septum formation initiator I862_03365 PF08264 Anticodon-binding domain of tRNA I862_03365 PF09334 tRNA synthetases class I (M) I862_03370 PF17289 I862_03370 I862_03375 PF01321 Creatinase/Prolidase N-terminal domain I862_03380 PF00557 Metallopeptidase family M24 I862_03380 PF16188 I862_03380 I862_03380 PF16189 I862_03380 I862_03385 PF13599 Pentapeptide repeats (9 copies) I862_03390 PF01118 Semialdehyde dehydrogenase, NAD binding domain I862_03390 PF02774 Semialdehyde dehydrogenase, dimerisation domain I862_03410 PF00005 ABC transporter I862_03410 PF00664 ABC transporter transmembrane region I862_03415 PF00698 Acyl transferase domain I862_03420 PF13561 Enoyl-(Acyl carrier protein) reductase I862_03425 PF03969 AFG1-like ATPase I862_03430 PF03741 I862_03430 I862_03435 PF01791 DeoC/LacD family aldolase I862_03440 PF01546 Peptidase family M20/M25/M40 I862_03440 PF07687 Peptidase dimerisation domain I862_03445 PF00132 Bacterial transferase hexapeptide (six repeats) I862_03445 PF14602 Hexapeptide repeat of succinyl-transferase I862_03445 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal I862_03450 PF13717 I862_03450 I862_03455 PF00440 Bacterial regulatory proteins, tetR family I862_03455 PF13305 WHG domain I862_03465 PF00227 Proteasome subunit I862_03470 PF05233 I862_03470 I862_03470 PF07879 I862_03470 I862_03480 PF00561 alpha/beta hydrolase fold I862_03485 PF04263 Thiamin pyrophosphokinase, catalytic domain I862_03485 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain I862_03490 PF00892 EamA-like transporter family I862_03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_03500 PF08448 PAS fold I862_03505 PF00072 Response regulator receiver domain I862_03505 PF01381 Helix-turn-helix I862_03510 PF00477 I862_03510 I862_03515 PF03219 I862_03515 I862_03520 PF05258 I862_03520 I862_03525 PF01078 Magnesium chelatase, subunit ChlI I862_03525 PF13335 I862_03525 I862_03525 PF13541 Subunit ChlI of Mg-chelatase I862_03530 PF00512 His Kinase A (phospho-acceptor) domain I862_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_03545 PF07063 Domain of unknown function (DUF1338) I862_03550 PF00623 RNA polymerase Rpb1, domain 2 I862_03550 PF04983 RNA polymerase Rpb1, domain 3 I862_03550 PF04997 RNA polymerase Rpb1, domain 1 I862_03550 PF04998 RNA polymerase Rpb1, domain 5 I862_03550 PF05000 RNA polymerase Rpb1, domain 4 I862_03555 PF00562 RNA polymerase Rpb2, domain 6 I862_03555 PF04560 RNA polymerase Rpb2, domain 7 I862_03555 PF04561 RNA polymerase Rpb2, domain 2 I862_03555 PF04563 RNA polymerase beta subunit I862_03555 PF04565 RNA polymerase Rpb2, domain 3 I862_03555 PF10385 RNA polymerase beta subunit external 1 domain I862_03560 PF00542 Ribosomal protein L7/L12 C-terminal domain I862_03560 PF16320 I862_03560 I862_03565 PF00466 Ribosomal protein L10 I862_03570 PF00687 Ribosomal protein L1p/L10e family I862_03575 PF00298 Ribosomal protein L11, RNA binding domain I862_03575 PF03946 Ribosomal protein L11, N-terminal domain I862_03580 PF00467 KOW motif I862_03580 PF02357 Transcription termination factor nusG I862_03585 PF00584 SecE/Sec61-gamma subunits of protein translocation complex I862_03595 PF00009 Elongation factor Tu GTP binding domain I862_03595 PF03143 Elongation factor Tu C-terminal domain I862_03595 PF03144 Elongation factor Tu domain 2 I862_03600 PF00005 ABC transporter I862_03605 PF03968 OstA-like protein I862_03610 PF07992 Pyridine nucleotide-disulphide oxidoreductase I862_03615 PF02594 Uncharacterised ACR, YggU family COG1872 I862_03620 PF02119 I862_03620 I862_03625 PF10135 I862_03625 I862_03635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal I862_03645 PF02623 FliW protein I862_03650 PF02416 mttA/Hcf106 family I862_03655 PF02091 Glycyl-tRNA synthetase alpha subunit I862_03665 PF01370 NAD dependent epimerase/dehydratase family I862_03670 PF00534 Glycosyl transferases group 1 I862_03670 PF13477 Glycosyl transferase 4-like I862_03685 PF13847 Methyltransferase domain I862_03695 PF00534 Glycosyl transferases group 1 I862_03695 PF13439 Glycosyltransferase Family 4 I862_03700 PF01728 FtsJ-like methyltransferase I862_03705 PF02321 Outer membrane efflux protein I862_03710 PF01225 Mur ligase family, catalytic domain I862_03710 PF02875 Mur ligase family, glutamate ligase domain I862_03710 PF08245 Mur ligase middle domain I862_03715 PF13525 Outer membrane lipoprotein I862_03720 PF13085 2Fe-2S iron-sulfur cluster binding domain I862_03720 PF13534 4Fe-4S dicluster domain I862_03725 PF04956 I862_03725 I862_03730 PF00471 Ribosomal protein L33 I862_03735 PF00005 ABC transporter I862_03740 PF05491 Holliday junction DNA helicase ruvB C-terminus I862_03740 PF05496 Holliday junction DNA helicase ruvB N-terminus I862_03745 PF00775 Dioxygenase I862_03750 PF01965 DJ-1/PfpI family I862_03755 PF17372 I862_03755 I862_03765 PF11233 I862_03765 I862_03770 PF00762 Ferrochelatase I862_03780 PF13561 Enoyl-(Acyl carrier protein) reductase I862_03785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily I862_03790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain I862_03790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain I862_03795 PF00528 Binding-protein-dependent transport system inner membrane component I862_03800 PF00005 ABC transporter I862_03800 PF09821 I862_03800 I862_03805 PF13358 DDE superfamily endonuclease I862_03810 PF01381 Helix-turn-helix I862_03815 PF02951 Prokaryotic glutathione synthetase, N-terminal domain I862_03815 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain I862_03820 PF00625 Guanylate kinase I862_03830 PF01409 tRNA synthetases class II core domain (F) I862_03830 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain I862_03835 PF00453 Ribosomal protein L20 I862_03840 PF01632 Ribosomal protein L35 I862_03850 PF00375 Sodium:dicarboxylate symporter family I862_03855 PF09608 I862_03855 I862_03860 PF01925 I862_03860 I862_03865 PF00462 Glutaredoxin I862_03870 PF01722 BolA-like protein I862_03875 PF01132 Elongation factor P (EF-P) OB domain I862_03875 PF08207 Elongation factor P (EF-P) KOW-like domain I862_03875 PF09285 Elongation factor P, C-terminal I862_03880 PF00317 Ribonucleotide reductase, all-alpha domain I862_03880 PF02867 Ribonucleotide reductase, barrel domain I862_03885 PF13525 Outer membrane lipoprotein I862_03890 PF00133 tRNA synthetases class I (I, L, M and V) I862_03890 PF08264 Anticodon-binding domain of tRNA I862_03890 PF13603 Leucyl-tRNA synthetase, Domain 2 I862_03895 PF00488 MutS domain V I862_03895 PF01624 MutS domain I I862_03895 PF05188 MutS domain II I862_03895 PF05190 MutS family domain IV I862_03895 PF05192 MutS domain III I862_03900 PF00490 Delta-aminolevulinic acid dehydratase I862_03920 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain I862_03925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain I862_03925 PF02874 ATP synthase alpha/beta family, beta-barrel domain I862_03935 PF00231 ATP synthase I862_03940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain I862_03940 PF00306 ATP synthase alpha/beta chain, C terminal domain I862_03940 PF02874 ATP synthase alpha/beta family, beta-barrel domain I862_03945 PF00213 ATP synthase delta (OSCP) subunit I862_03950 PF02390 Putative methyltransferase I862_03955 PF00438 S-adenosylmethionine synthetase, N-terminal domain I862_03955 PF02772 S-adenosylmethionine synthetase, central domain I862_03955 PF02773 S-adenosylmethionine synthetase, C-terminal domain I862_03960 PF00348 Polyprenyl synthetase I862_03965 PF00533 BRCA1 C Terminus (BRCT) domain I862_03965 PF01653 NAD-dependent DNA ligase adenylation domain I862_03965 PF03119 NAD-dependent DNA ligase C4 zinc finger domain I862_03965 PF03120 NAD-dependent DNA ligase OB-fold domain I862_03965 PF12826 Helix-hairpin-helix motif I862_03970 PF01225 Mur ligase family, catalytic domain I862_03970 PF02875 Mur ligase family, glutamate ligase domain I862_03970 PF08245 Mur ligase middle domain I862_03975 PF02021 Uncharacterised protein family UPF0102 I862_03980 PF00437 Type II/IV secretion system protein I862_03985 PF00515 Tetratricopeptide repeat I862_03985 PF07719 Tetratricopeptide repeat I862_03990 PF00474 Sodium:solute symporter family I862_03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_03995 PF01230 HIT domain I862_04000 PF03279 I862_04000 I862_04010 PF00768 D-alanyl-D-alanine carboxypeptidase I862_04010 PF07943 Penicillin-binding protein 5, C-terminal domain I862_04025 PF10983 I862_04025 I862_04030 PF07690 Major Facilitator Superfamily I862_04035 PF08543 Phosphomethylpyrimidine kinase I862_04045 PF00512 His Kinase A (phospho-acceptor) domain I862_04045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_04050 PF00701 Dihydrodipicolinate synthetase family I862_04055 PF13177 DNA polymerase III, delta subunit I862_04060 PF01252 I862_04060 I862_04070 PF02074 Carboxypeptidase Taq (M32) metallopeptidase I862_04075 PF00512 His Kinase A (phospho-acceptor) domain I862_04075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_04080 PF01676 Metalloenzyme superfamily I862_04080 PF06415 BPG-independent PGAM N-terminus (iPGM_N) I862_04085 PF00342 Phosphoglucose isomerase I862_04090 PF01966 HD domain I862_04090 PF13286 Phosphohydrolase-associated domain I862_04095 PF02381 MraZ protein I862_04100 PF01795 MraW methylase family I862_04110 PF00905 Penicillin binding protein transpeptidase domain I862_04110 PF03717 Penicillin-binding Protein dimerisation domain I862_04125 PF01380 SIS domain I862_04125 PF13522 Glutamine amidotransferase domain I862_04135 PF00512 His Kinase A (phospho-acceptor) domain I862_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_04140 PF00072 Response regulator receiver domain I862_04140 PF13581 Histidine kinase-like ATPase domain I862_04145 PF01734 Patatin-like phospholipase I862_04150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain I862_04150 PF07497 Rho termination factor, RNA-binding domain I862_04150 PF07498 Rho termination factor, N-terminal domain I862_04155 PF00288 GHMP kinases N terminal domain I862_04155 PF08544 GHMP kinases C terminal I862_04160 PF00563 EAL domain I862_04165 PF00589 Phage integrase family I862_04165 PF13356 Domain of unknown function (DUF4102) I862_04165 PF14659 Phage integrase, N-terminal SAM-like domain I862_04175 PF12796 Ankyrin repeats (3 copies) I862_04185 PF13424 Tetratricopeptide repeat I862_04195 PF12796 Ankyrin repeats (3 copies) I862_04205 PF00474 Sodium:solute symporter family I862_04205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_04220 PF13547 I862_04220 I862_04225 PF00959 Phage lysozyme I862_04230 PF11351 I862_04230 I862_04240 PF10983 I862_04240 I862_04245 PF13547 I862_04245 I862_04245 PF13550 I862_04245 I862_04255 PF12686 I862_04255 I862_04260 PF09356 I862_04260 I862_04260 PF09931 I862_04260 I862_04265 PF09343 I862_04265 I862_04270 PF06120 I862_04270 I862_04270 PF09718 I862_04270 I862_04310 PF03864 Phage major capsid protein E I862_04315 PF02924 Bacteriophage lambda head decoration protein D I862_04320 PF01343 Peptidase family S49 I862_04325 PF05136 I862_04325 I862_04330 PF02831 gpW I862_04335 PF05876 I862_04335 I862_04345 PF01555 DNA methylase I862_04345 PF02195 ParB-like nuclease domain I862_04360 PF13481 AAA domain I862_04375 PF13479 I862_04375 I862_04400 PF00023 Ankyrin repeat I862_04400 PF12796 Ankyrin repeats (3 copies) I862_04405 PF14441 I862_04405 I862_04410 PF13599 Pentapeptide repeats (9 copies) I862_04415 PF00665 Integrase core domain I862_04415 PF13276 I862_04415 I862_04420 PF01527 Transposase I862_04440 PF00474 Sodium:solute symporter family I862_04440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_04445 PF00444 Ribosomal protein L36 I862_04450 PF12796 Ankyrin repeats (3 copies) I862_04455 PF01569 PAP2 superfamily I862_04465 PF00813 I862_04465 I862_04475 PF00905 Penicillin binding protein transpeptidase domain I862_04475 PF00912 Transglycosylase I862_04475 PF17092 I862_04475 I862_04480 PF12969 Domain of Unknown Function with PDB structure (DUF3857) I862_04485 PF02441 Flavoprotein I862_04485 PF04127 DNA / pantothenate metabolism flavoprotein I862_04490 PF00293 NUDIX domain I862_04495 PF08241 Methyltransferase domain I862_04500 PF00436 Single-strand binding protein family I862_04505 PF01197 Ribosomal protein L31 I862_04510 PF04610 I862_04510 I862_04515 PF02410 Oligomerisation domain I862_04520 PF01467 Cytidylyltransferase I862_04525 PF01467 Cytidylyltransferase I862_04530 PF00004 ATPase family associated with various cellular activities (AAA) I862_04530 PF02190 ATP-dependent protease La (LON) domain I862_04530 PF05362 Lon protease (S16) C-terminal proteolytic domain I862_04535 PF04093 I862_04535 I862_04540 PF00905 Penicillin binding protein transpeptidase domain I862_04540 PF03717 Penicillin-binding Protein dimerisation domain I862_04550 PF01227 GTP cyclohydrolase I I862_04565 PF00892 EamA-like transporter family I862_04585 PF00892 EamA-like transporter family I862_04590 PF09335 I862_04590 I862_04600 PF00583 Acetyltransferase (GNAT) family I862_04605 PF02834 LigT like Phosphoesterase I862_04610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein I862_04610 PF16321 I862_04610 I862_04615 PF04055 Radical SAM superfamily I862_04615 PF13394 4Fe-4S single cluster domain I862_04625 PF05982 I862_04625 I862_04635 PF02348 Cytidylyltransferase I862_04645 PF13975 I862_04645 I862_04650 PF01272 Transcription elongation factor, GreA/GreB, C-term I862_04650 PF03449 Transcription elongation factor, N-terminal I862_04660 PF00005 ABC transporter I862_04665 PF07866 Protein of unknown function (DUF1653) I862_04670 PF00571 CBS domain I862_04670 PF03471 Transporter associated domain I862_04675 PF02130 Uncharacterized protein family UPF0054 I862_04680 PF02562 PhoH-like protein I862_04685 PF13505 Outer membrane protein beta-barrel domain I862_04700 PF00768 D-alanyl-D-alanine carboxypeptidase I862_04705 PF04452 RNA methyltransferase I862_04710 PF08886 Glutamate-cysteine ligase I862_04715 PF12796 Ankyrin repeats (3 copies) I862_04720 PF09923 I862_04720 I862_04725 PF02470 I862_04725 I862_04730 PF05071 I862_04730 I862_04735 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family I862_04740 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain I862_04740 PF02777 Iron/manganese superoxide dismutases, C-terminal domain I862_04745 PF04335 VirB8 protein I862_04750 PF03524 Conjugal transfer protein I862_04755 PF03743 Bacterial conjugation TrbI-like protein I862_04760 PF00437 Type II/IV secretion system protein I862_04765 PF02534 Type IV secretory system Conjugative DNA transfer I862_04775 PF02322 I862_04775 I862_04780 PF01654 I862_04780 I862_04785 PF09411 Lipid A 3-O-deacylase (PagL) I862_04795 PF00216 Bacterial DNA-binding protein I862_04800 PF03819 MazG nucleotide pyrophosphohydrolase domain I862_04805 PF01527 Transposase I862_04810 PF13419 Haloacid dehalogenase-like hydrolase I862_04815 PF00005 ABC transporter I862_04815 PF00664 ABC transporter transmembrane region I862_04820 PF00719 Inorganic pyrophosphatase I862_04825 PF00581 Rhodanese-like domain I862_04830 PF00571 CBS domain I862_04830 PF01595 I862_04830 I862_04830 PF03471 Transporter associated domain I862_04840 PF04551 GcpE protein I862_04850 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD I862_04855 PF00133 tRNA synthetases class I (I, L, M and V) I862_04855 PF08264 Anticodon-binding domain of tRNA I862_04860 PF02601 I862_04860 I862_04860 PF13742 I862_04860 I862_04865 PF00460 Flagella basal body rod protein I862_04865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal I862_04870 PF00460 Flagella basal body rod protein I862_04870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal I862_04875 PF13144 SAF-like I862_04880 PF02107 I862_04880 I862_04900 PF00140 Sigma-70 factor, region 1 I862_04900 PF03979 Sigma-70 factor, region 1 I862_04905 PF04539 Sigma-70 region 3 I862_04905 PF04542 Sigma-70 region 2 I862_04905 PF04545 Sigma-70, region 4 I862_04905 PF04546 Sigma-70, non-essential region I862_04915 PF00118 TCP-1/cpn60 chaperonin family I862_04920 PF00166 Chaperonin 10 Kd subunit I862_04925 PF07963 Prokaryotic N-terminal methylation motif I862_04930 PF00829 Ribosomal prokaryotic L21 protein I862_04935 PF01016 Ribosomal L27 protein I862_04945 PF02049 I862_04945 I862_04955 PF00460 Flagella basal body rod protein I862_04960 PF00923 Transaldolase I862_04965 PF12796 Ankyrin repeats (3 copies) I862_04975 PF12796 Ankyrin repeats (3 copies) I862_04980 PF00133 tRNA synthetases class I (I, L, M and V) I862_04980 PF08264 Anticodon-binding domain of tRNA I862_04990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal I862_04990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III I862_04995 PF02504 Fatty acid synthesis protein I862_05000 PF01783 Ribosomal L32p protein family I862_05005 PF00501 AMP-binding enzyme I862_05005 PF01553 Acyltransferase I862_05005 PF07690 Major Facilitator Superfamily I862_05010 PF13302 Acetyltransferase (GNAT) domain I862_05015 PF10101 I862_05015 I862_05020 PF13505 Outer membrane protein beta-barrel domain I862_05030 PF00285 Citrate synthase I862_05035 PF03937 Flavinator of succinate dehydrogenase I862_05040 PF02684 I862_05040 I862_05045 PF02541 Ppx/GppA phosphatase family I862_05050 PF00154 recA bacterial DNA recombination protein I862_05055 PF13302 Acetyltransferase (GNAT) domain I862_05065 PF00380 Ribosomal protein S9/S16 I862_05070 PF00572 Ribosomal protein L13 I862_05075 PF01509 TruB family pseudouridylate synthase (N terminal domain) I862_05075 PF16198 I862_05075 I862_05080 PF00312 Ribosomal protein S15 I862_05085 PF00013 KH domain I862_05085 PF00575 S1 RNA binding domain I862_05085 PF01138 3' exoribonuclease family, domain 1 I862_05085 PF03725 3' exoribonuclease family, domain 2 I862_05085 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain I862_05095 PF13481 AAA domain I862_05095 PF13541 Subunit ChlI of Mg-chelatase I862_05100 PF02674 I862_05100 I862_05105 PF00892 EamA-like transporter family I862_05110 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) I862_05110 PF00364 Biotin-requiring enzyme I862_05110 PF02817 e3 binding domain I862_05115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I862_05115 PF07992 Pyridine nucleotide-disulphide oxidoreductase I862_05120 PF07691 PA14 domain I862_05125 PF00892 EamA-like transporter family I862_05135 PF04364 DNA polymerase III chi subunit, HolC I862_05140 PF05088 I862_05140 I862_05150 PF03739 I862_05150 I862_05155 PF00588 SpoU rRNA Methylase family I862_05160 PF01336 OB-fold nucleic acid binding domain I862_05160 PF02811 PHP domain I862_05160 PF07733 Bacterial DNA polymerase III alpha subunit I862_05160 PF14579 Helix-hairpin-helix motif I862_05165 PF02811 PHP domain I862_05170 PF03524 Conjugal transfer protein I862_05175 PF04335 VirB8 protein I862_05195 PF00012 Hsp70 protein I862_05200 PF07743 HSCB C-terminal oligomerisation domain I862_05205 PF12796 Ankyrin repeats (3 copies) I862_05210 PF10691 I862_05210 I862_05215 PF00072 Response regulator receiver domain I862_05215 PF00512 His Kinase A (phospho-acceptor) domain I862_05215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_05225 PF00072 Response regulator receiver domain I862_05225 PF00486 Transcriptional regulatory protein, C terminal I862_05230 PF00072 Response regulator receiver domain I862_05230 PF07228 Stage II sporulation protein E (SpoIIE) I862_05235 PF00293 NUDIX domain I862_05240 PF07963 Prokaryotic N-terminal methylation motif I862_05250 PF07963 Prokaryotic N-terminal methylation motif I862_05255 PF07963 Prokaryotic N-terminal methylation motif I862_05260 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase I862_05260 PF02542 YgbB family I862_05265 PF04608 Phosphatidylglycerophosphatase A I862_05270 PF02464 Competence-damaged protein I862_05280 PF00933 Glycosyl hydrolase family 3 N terminal domain I862_05285 PF02643 Uncharacterized ACR, COG1430 I862_05290 PF02120 Flagellar hook-length control protein FliK I862_05295 PF03963 I862_05295 I862_05295 PF13860 FlgD Ig-like domain I862_05305 PF00474 Sodium:solute symporter family I862_05320 PF00474 Sodium:solute symporter family I862_05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_05325 PF12796 Ankyrin repeats (3 copies) I862_05335 PF03100 CcmE I862_05340 PF01192 RNA polymerase Rpb6 I862_05345 PF00152 tRNA synthetases class II (D, K and N) I862_05345 PF01336 OB-fold nucleic acid binding domain I862_05345 PF02938 GAD domain I862_05350 PF02590 Predicted SPOUT methyltransferase I862_05355 PF04055 Radical SAM superfamily I862_05355 PF06969 HemN C-terminal domain I862_05360 PF00448 SRP54-type protein, GTPase domain I862_05360 PF02881 SRP54-type protein, helical bundle domain I862_05360 PF02978 Signal peptide binding domain I862_05365 PF04355 SmpA / OmlA family I862_05370 PF00486 Transcriptional regulatory protein, C terminal I862_05375 PF00578 AhpC/TSA family I862_05375 PF10417 C-terminal domain of 1-Cys peroxiredoxin I862_05380 PF07992 Pyridine nucleotide-disulphide oxidoreductase I862_05385 PF01218 Coproporphyrinogen III oxidase I862_05390 PF02622 Uncharacterized ACR, COG1678 I862_05400 PF13516 Leucine Rich repeat I862_05405 PF00004 ATPase family associated with various cellular activities (AAA) I862_05405 PF01434 Peptidase family M41 I862_05405 PF06480 FtsH Extracellular I862_05425 PF00072 Response regulator receiver domain I862_05425 PF00158 Sigma-54 interaction domain I862_05425 PF02954 Bacterial regulatory protein, Fis family I862_05435 PF01578 I862_05435 I862_05445 PF13632 Glycosyl transferase family group 2 I862_05450 PF03364 Polyketide cyclase / dehydrase and lipid transport I862_05455 PF13413 Helix-turn-helix domain I862_05460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I862_05460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain I862_05465 PF00162 Phosphoglycerate kinase I862_05470 PF06271 I862_05470 I862_05485 PF00263 I862_05485 I862_05485 PF07655 I862_05485 I862_05490 PF00113 Enolase, C-terminal TIM barrel domain I862_05490 PF03952 Enolase, N-terminal domain I862_05495 PF00113 Enolase, C-terminal TIM barrel domain I862_05505 PF01648 4'-phosphopantetheinyl transferase superfamily I862_05515 PF01144 Coenzyme A transferase I862_05520 PF01144 Coenzyme A transferase I862_05525 PF07690 Major Facilitator Superfamily I862_05530 PF16576 I862_05530 I862_05540 PF00873 AcrB/AcrD/AcrF family I862_05545 PF13489 Methyltransferase domain I862_05550 PF00534 Glycosyl transferases group 1 I862_05550 PF13439 Glycosyltransferase Family 4 I862_05555 PF13180 PDZ domain I862_05555 PF13365 Trypsin-like peptidase domain I862_05560 PF00005 ABC transporter I862_05560 PF00664 ABC transporter transmembrane region I862_05565 PF00270 DEAD/DEAH box helicase I862_05565 PF00271 Helicase conserved C-terminal domain I862_05565 PF17191 I862_05565 I862_05570 PF01427 D-ala-D-ala dipeptidase I862_05575 PF06750 I862_05575 I862_05580 PF00892 EamA-like transporter family I862_05585 PF00334 Nucleoside diphosphate kinase I862_05590 PF00696 Amino acid kinase family I862_05590 PF13840 ACT domain I862_05595 PF13561 Enoyl-(Acyl carrier protein) reductase I862_05600 PF16998 I862_05600 I862_05610 PF00633 Helix-hairpin-helix motif I862_05610 PF00730 HhH-GPD superfamily base excision DNA repair protein I862_05610 PF10576 Iron-sulfur binding domain of endonuclease III I862_05615 PF00535 Glycosyl transferase family 2 I862_05620 PF01121 Dephospho-CoA kinase I862_05625 PF00929 Exonuclease I862_05630 PF01368 DHH family I862_05635 PF13857 Ankyrin repeats (many copies) I862_05640 PF00933 Glycosyl hydrolase family 3 N terminal domain I862_05650 PF00535 Glycosyl transferase family 2 I862_05655 PF07690 Major Facilitator Superfamily I862_05660 PF01921 tRNA synthetases class I (K) I862_05665 PF00300 Histidine phosphatase superfamily (branch 1) I862_05675 PF00183 Hsp90 protein I862_05675 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_05690 PF00750 tRNA synthetases class I (R) I862_05690 PF03485 Arginyl tRNA synthetase N terminal domain I862_05690 PF05746 DALR anticodon binding domain I862_05695 PF07690 Major Facilitator Superfamily I862_05710 PF01018 GTP1/OBG I862_05710 PF01926 50S ribosome-binding GTPase I862_05715 PF00691 OmpA family I862_05720 PF01553 Acyltransferase I862_05725 PF05170 I862_05725 I862_05730 PF00805 Pentapeptide repeats (8 copies) I862_05740 PF04085 rod shape-determining protein MreC I862_05745 PF04055 Radical SAM superfamily I862_05750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) I862_05750 PF03129 Anticodon binding domain I862_05755 PF00814 Glycoprotease family I862_05765 PF00583 Acetyltransferase (GNAT) family I862_05770 PF01196 Ribosomal protein L17 I862_05775 PF01000 RNA polymerase Rpb3/RpoA insert domain I862_05775 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain I862_05775 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain I862_05780 PF00411 Ribosomal protein S11 I862_05785 PF00416 Ribosomal protein S13/S18 I862_05790 PF00406 Adenylate kinase I862_05790 PF05191 Adenylate kinase, active site lid I862_05795 PF00344 SecY translocase I862_05800 PF00828 Ribosomal protein L18e/L15 I862_05805 PF00327 Ribosomal protein L30p/L7e I862_05810 PF00333 Ribosomal protein S5, N-terminal domain I862_05810 PF03719 Ribosomal protein S5, C-terminal domain I862_05815 PF00861 Ribosomal L18p/L5e family I862_05820 PF00347 Ribosomal protein L6 I862_05825 PF00410 Ribosomal protein S8 I862_05830 PF00253 Ribosomal protein S14p/S29e I862_05835 PF00281 Ribosomal protein L5 I862_05835 PF00673 ribosomal L5P family C-terminus I862_05840 PF00467 KOW motif I862_05840 PF17136 I862_05840 I862_05845 PF00238 Ribosomal protein L14p/L23e I862_05850 PF00366 Ribosomal protein S17 I862_05855 PF00831 Ribosomal L29 protein I862_05860 PF00252 Ribosomal protein L16p/L10e I862_05865 PF00189 Ribosomal protein S3, C-terminal domain I862_05865 PF07650 KH domain I862_05870 PF00237 Ribosomal protein L22p/L17e I862_05875 PF00203 Ribosomal protein S19 I862_05880 PF00181 Ribosomal Proteins L2, RNA binding domain I862_05880 PF03947 Ribosomal Proteins L2, C-terminal domain I862_05885 PF00276 Ribosomal protein L23 I862_05890 PF00573 Ribosomal protein L4/L1 family I862_05895 PF00297 Ribosomal protein L3 I862_05900 PF00338 Ribosomal protein S10p/S20e I862_05905 PF00009 Elongation factor Tu GTP binding domain I862_05905 PF03143 Elongation factor Tu C-terminal domain I862_05905 PF03144 Elongation factor Tu domain 2 I862_05910 PF00009 Elongation factor Tu GTP binding domain I862_05910 PF00679 Elongation factor G C-terminus I862_05910 PF03144 Elongation factor Tu domain 2 I862_05910 PF03764 Elongation factor G, domain IV I862_05910 PF14492 Elongation Factor G, domain II I862_05915 PF00177 Ribosomal protein S7p/S5e I862_05920 PF00164 Ribosomal protein S12/S23 I862_05925 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain I862_05930 PF01202 Shikimate kinase I862_05940 PF01571 Aminomethyltransferase folate-binding domain I862_05940 PF08669 Glycine cleavage T-protein C-terminal barrel domain I862_05945 PF00464 Serine hydroxymethyltransferase I862_05950 PF02502 Ribose/Galactose Isomerase I862_05955 PF06347 Bacterial SH3 domain I862_05960 PF01467 Cytidylyltransferase I862_05965 PF02367 Uncharacterised P-loop hydrolase UPF0079 I862_05970 PF00905 Penicillin binding protein transpeptidase domain I862_05970 PF00912 Transglycosylase I862_05975 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit I862_05975 PF10531 SLBB domain I862_05975 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region I862_05980 PF01618 I862_05980 I862_05985 PF01544 CorA-like Mg2+ transporter protein I862_05990 PF01281 Ribosomal protein L9, N-terminal domain I862_05990 PF03948 Ribosomal protein L9, C-terminal domain I862_05995 PF01084 Ribosomal protein S18 I862_06000 PF01250 Ribosomal protein S6 I862_06005 PF12706 Beta-lactamase superfamily domain I862_06010 PF01026 TatD related DNase I862_06015 PF00216 Bacterial DNA-binding protein I862_06020 PF09527 I862_06020 I862_06025 PF00119 ATP synthase A chain I862_06030 PF00137 ATP synthase subunit C I862_06035 PF00430 ATP synthase B/B' CF(0) I862_06040 PF00430 ATP synthase B/B' CF(0) I862_06045 PF00579 tRNA synthetases class I (W and Y) I862_06050 PF02167 Cytochrome C1 family I862_06055 PF00069 Protein kinase domain I862_06055 PF03109 I862_06055 I862_06060 PF01027 Inhibitor of apoptosis-promoting Bax1 I862_06065 PF00034 Cytochrome c I862_06070 PF01957 NfeD-like C-terminal, partner-binding I862_06075 PF01145 SPFH domain / Band 7 family I862_06075 PF16200 I862_06075 I862_06080 PF13489 Methyltransferase domain I862_06085 PF04333 I862_06085 I862_06090 PF05494 Toluene tolerance, Ttg2 I862_06095 PF00115 Cytochrome C and Quinol oxidase polypeptide I I862_06100 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO I862_06105 PF05545 I862_06105 I862_06110 PF13442 Cytochrome C oxidase, cbb3-type, subunit III I862_06110 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP I862_06115 PF00477 I862_06115 I862_06120 PF00216 Bacterial DNA-binding protein I862_06125 PF14518 Iron-containing redox enzyme I862_06130 PF02582 I862_06130 I862_06135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit I862_06140 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin I862_06145 PF02481 DNA recombination-mediator protein A I862_06150 PF12169 DNA polymerase III subunits gamma and tau domain III I862_06150 PF12362 I862_06150 I862_06150 PF13177 DNA polymerase III, delta subunit I862_06155 PF02575 YbaB/EbfC DNA-binding family I862_06160 PF04028 I862_06160 I862_06165 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) I862_06170 PF02606 Tetraacyldisaccharide-1-P 4'-kinase I862_06175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain I862_06180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I I862_06180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II I862_06180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III I862_06185 PF12838 4Fe-4S dicluster domain I862_06190 PF01565 FAD binding domain I862_06190 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain I862_06195 PF00472 RF-1 domain I862_06195 PF03462 PCRF domain I862_06200 PF00919 Uncharacterized protein family UPF0004 I862_06200 PF01938 TRAM domain I862_06200 PF04055 Radical SAM superfamily I862_06205 PF09361 I862_06205 I862_06210 PF12796 Ankyrin repeats (3 copies) I862_06220 PF13561 Enoyl-(Acyl carrier protein) reductase I862_06225 PF01734 Patatin-like phospholipase I862_06230 PF01521 Iron-sulphur cluster biosynthesis I862_06240 PF01351 Ribonuclease HII I862_06245 PF00348 Polyprenyl synthetase I862_06250 PF04386 Stringent starvation protein B I862_06255 PF02152 Dihydroneopterin aldolase I862_06260 PF00163 Ribosomal protein S4/S9 N-terminal domain I862_06260 PF01479 S4 domain I862_06270 PF00155 Aminotransferase class I and II I862_06275 PF03309 Type III pantothenate kinase I862_06280 PF01596 O-methyltransferase I862_06285 PF01521 Iron-sulphur cluster biosynthesis I862_06290 PF01592 NifU-like N terminal domain I862_06295 PF00266 Aminotransferase class-V I862_06300 PF00266 Aminotransferase class-V I862_06305 PF02082 Transcriptional regulator I862_06310 PF00561 alpha/beta hydrolase fold I862_06315 PF03702 Uncharacterised protein family (UPF0075) I862_06320 PF13417 Glutathione S-transferase, N-terminal domain I862_06320 PF14497 Glutathione S-transferase, C-terminal domain I862_06325 PF02401 LytB protein I862_06340 PF13145 PPIC-type PPIASE domain I862_06340 PF13624 SurA N-terminal domain I862_06345 PF03938 Outer membrane protein (OmpH-like) I862_06350 PF01103 Surface antigen I862_06350 PF07244 Surface antigen variable number repeat I862_06355 PF02163 Peptidase family M50 I862_06355 PF13180 PDZ domain I862_06360 PF00875 DNA photolyase I862_06365 PF03441 FAD binding domain of DNA photolyase I862_06380 PF01527 Transposase I862_06385 PF00665 Integrase core domain I862_06385 PF13276 I862_06385 I862_06400 PF01527 Transposase I862_06405 PF13847 Methyltransferase domain I862_06410 PF04002 RadC-like JAB domain I862_06420 PF12796 Ankyrin repeats (3 copies) I862_06425 PF00849 RNA pseudouridylate synthase I862_06430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain I862_06435 PF03918 Cytochrome C biogenesis protein I862_06445 PF06414 Zeta toxin I862_06450 PF03219 I862_06450 I862_06455 PF00884 Sulfatase I862_06460 PF00795 Carbon-nitrogen hydrolase I862_06460 PF02540 NAD synthase I862_06470 PF02578 Multi-copper polyphenol oxidoreductase laccase I862_06475 PF04610 I862_06475 I862_06480 PF04610 I862_06480 I862_06485 PF04610 I862_06485 I862_06490 PF03135 I862_06490 I862_06495 PF05101 I862_06495 I862_06505 PF06144 DNA polymerase III, delta subunit I862_06510 PF01134 Glucose inhibited division protein A I862_06515 PF01386 Ribosomal L25p family I862_06515 PF14693 Ribosomal protein TL5, C-terminal domain I862_06520 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase I862_06520 PF14572 Phosphoribosyl synthetase-associated domain I862_06530 PF00512 His Kinase A (phospho-acceptor) domain I862_06530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_06535 PF01478 Type IV leader peptidase family I862_06535 PF06750 I862_06535 I862_06540 PF07963 Prokaryotic N-terminal methylation motif I862_06550 PF07963 Prokaryotic N-terminal methylation motif I862_06555 PF01327 Polypeptide deformylase I862_06560 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase I862_06565 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase I862_06575 PF02698 DUF218 domain I862_06585 PF08780 Nucleotidyltransferase substrate binding protein like I862_06590 PF01909 Nucleotidyltransferase domain I862_06595 PF03054 tRNA methyl transferase I862_06600 PF02096 60Kd inner membrane protein I862_06600 PF14849 YidC periplasmic domain I862_06605 PF01809 I862_06605 I862_06610 PF00825 Ribonuclease P I862_06615 PF00468 Ribosomal protein L34 I862_06620 PF03167 Uracil DNA glycosylase superfamily I862_06625 PF01687 Riboflavin kinase I862_06625 PF06574 FAD synthetase I862_06630 PF01580 FtsK/SpoIIIE family I862_06630 PF09397 Ftsk gamma domain I862_06630 PF13491 I862_06630 I862_06635 PF00570 HRDC domain I862_06635 PF01612 3'-5' exonuclease I862_06640 PF01743 Poly A polymerase head domain I862_06640 PF12627 Probable RNA and SrmB- binding site of polymerase A I862_06645 PF00676 Dehydrogenase E1 component I862_06650 PF03358 NADPH-dependent FMN reductase I862_06655 PF02779 Transketolase, pyrimidine binding domain I862_06655 PF02780 Transketolase, C-terminal domain I862_06660 PF00005 ABC transporter I862_06660 PF00664 ABC transporter transmembrane region I862_06665 PF07992 Pyridine nucleotide-disulphide oxidoreductase I862_06670 PF02627 Carboxymuconolactone decarboxylase family I862_06675 PF01926 50S ribosome-binding GTPase I862_06675 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal I862_06680 PF00583 Acetyltransferase (GNAT) family I862_06685 PF02463 RecF/RecN/SMC N terminal domain I862_06690 PF03448 MgtE intracellular N domain I862_06700 PF01052 Surface presentation of antigens (SPOA) I862_06700 PF02154 Flagellar motor switch protein FliM I862_06705 PF03748 I862_06705 I862_06710 PF01432 Peptidase family M3 I862_06710 PF08439 Oligopeptidase F I862_06725 PF00692 dUTPase I862_06730 PF08534 Redoxin I862_06735 PF00206 Lyase I862_06740 PF00023 Ankyrin repeat I862_06740 PF12796 Ankyrin repeats (3 copies) I862_06745 PF00005 ABC transporter I862_06745 PF12848 ABC transporter I862_06750 PF01040 UbiA prenyltransferase family I862_06755 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit I862_06760 PF01709 Transcriptional regulator I862_06765 PF02075 Crossover junction endodeoxyribonuclease RuvC I862_06770 PF01594 I862_06770 I862_06775 PF10073 I862_06775 I862_06780 PF03772 I862_06780 I862_06780 PF13567 I862_06780 I862_06790 PF02637 GatB domain I862_06790 PF02934 GatB/GatE catalytic domain I862_06800 PF00120 Glutamine synthetase, catalytic domain I862_06800 PF03951 Glutamine synthetase, beta-Grasp domain I862_06805 PF00270 DEAD/DEAH box helicase I862_06805 PF00271 Helicase conserved C-terminal domain I862_06805 PF02559 CarD-like/TRCF domain I862_06805 PF03461 TRCF domain I862_06810 PF01464 Transglycosylase SLT domain I862_06815 PF01926 50S ribosome-binding GTPase I862_06815 PF10396 GTP-binding protein TrmE N-terminus I862_06815 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE I862_06820 PF01134 Glucose inhibited division protein A I862_06820 PF13932 GidA associated domain 3 I862_06825 PF02527 rRNA small subunit methyltransferase G I862_06830 PF13614 AAA domain I862_06835 PF02195 ParB-like nuclease domain I862_06850 PF01371 Trp repressor protein I862_06855 PF02592 I862_06855 I862_06860 PF04610 I862_06860 I862_06865 PF13360 PQQ-like domain I862_06870 PF13386 I862_06870 I862_06875 PF00300 Histidine phosphatase superfamily (branch 1) I862_06880 PF01208 Uroporphyrinogen decarboxylase (URO-D) I862_06885 PF00772 DnaB-like helicase N terminal domain I862_06885 PF03796 DnaB-like helicase C terminal domain I862_06890 PF00474 Sodium:solute symporter family I862_06890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_06895 PF11020 I862_06895 I862_06905 PF01588 Putative tRNA binding domain I862_06905 PF03147 Ferredoxin-fold anticodon binding domain I862_06905 PF03483 B3/4 domain I862_06905 PF03484 tRNA synthetase B5 domain I862_06910 PF00563 EAL domain I862_06915 PF03653 I862_06915 I862_06920 PF13516 Leucine Rich repeat I862_06925 PF00023 Ankyrin repeat I862_06925 PF12796 Ankyrin repeats (3 copies) I862_06930 PF08511 COQ9 I862_06935 PF00557 Metallopeptidase family M24 I862_06940 PF12796 Ankyrin repeats (3 copies) I862_06945 PF00204 DNA gyrase B I862_06945 PF00986 DNA gyrase B subunit, carboxyl terminus I862_06945 PF01751 Toprim domain I862_06945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_06950 PF01636 Phosphotransferase enzyme family I862_06955 PF00206 Lyase I862_06955 PF10415 Fumarase C C-terminus I862_06960 PF01425 Amidase I862_06975 PF02660 I862_06975 I862_06980 PF00004 ATPase family associated with various cellular activities (AAA) I862_06980 PF07724 AAA domain (Cdc48 subfamily) I862_06980 PF10431 C-terminal, D2-small domain, of ClpB protein I862_06985 PF00108 Thiolase, N-terminal domain I862_06985 PF02803 Thiolase, C-terminal domain I862_06990 PF13561 Enoyl-(Acyl carrier protein) reductase I862_06995 PF01476 LysM domain I862_06995 PF01551 Peptidase family M23 I862_07000 PF01551 Peptidase family M23 I862_07005 PF00551 Formyl transferase I862_07005 PF02911 Formyl transferase, C-terminal domain I862_07015 PF12100 I862_07015 I862_07020 PF00121 Triosephosphate isomerase I862_07025 PF07219 I862_07025 I862_07035 PF13462 Thioredoxin I862_07040 PF01435 Peptidase family M48 I862_07045 PF00771 FHIPEP family I862_07050 PF00271 Helicase conserved C-terminal domain I862_07050 PF04851 Type III restriction enzyme, res subunit I862_07055 PF01406 tRNA synthetases class I (C) catalytic domain I862_07065 PF13624 SurA N-terminal domain I862_07070 PF03968 OstA-like protein I862_07070 PF04453 Organic solvent tolerance protein I862_07075 PF01063 Aminotransferase class IV I862_07080 PF00398 Ribosomal RNA adenine dimethylase I862_07085 PF01316 Arginine repressor, DNA binding domain I862_07085 PF02863 Arginine repressor, C-terminal domain I862_07090 PF00497 Bacterial extracellular solute-binding proteins, family 3 I862_07095 PF00528 Binding-protein-dependent transport system inner membrane component I862_07100 PF00005 ABC transporter I862_07115 PF05751 I862_07115 I862_07120 PF00669 Bacterial flagellin N-terminal helical region I862_07120 PF00700 Bacterial flagellin C-terminal helical region I862_07125 PF02465 I862_07125 I862_07125 PF07195 I862_07125 I862_07125 PF07196 Flagellin hook IN motif I862_07135 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) I862_07140 PF00809 Pterin binding enzyme I862_07145 PF02092 I862_07145 I862_07150 PF02092 I862_07150 I862_07165 PF02875 Mur ligase family, glutamate ligase domain I862_07165 PF08245 Mur ligase middle domain I862_07170 PF00953 Glycosyl transferase family 4 I862_07170 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 I862_07175 PF02230 Phospholipase/Carboxylesterase I862_07180 PF01098 I862_07180 I862_07185 PF13103 TonB C terminal I862_07205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) I862_07205 PF02824 TGS domain I862_07205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain I862_07210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) I862_07210 PF03129 Anticodon binding domain I862_07215 PF00707 Translation initiation factor IF-3, C-terminal domain I862_07215 PF05198 Translation initiation factor IF-3, N-terminal domain I862_07220 PF00512 His Kinase A (phospho-acceptor) domain I862_07220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I862_07225 PF03706 I862_07225 I862_07235 PF01578 I862_07235 I862_07235 PF16327 I862_07235 I862_07240 PF06965 Na+/H+ antiporter 1 I862_07245 PF02687 I862_07245 I862_07245 PF12704 MacB-like periplasmic core domain I862_07250 PF00579 tRNA synthetases class I (W and Y) I862_07255 PF00483 Nucleotidyl transferase I862_07255 PF01050 Mannose-6-phosphate isomerase I862_07265 PF03062 I862_07265 I862_07270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain I862_07270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain I862_07270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain I862_07275 PF00132 Bacterial transferase hexapeptide (six repeats) I862_07275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold I862_07275 PF14602 Hexapeptide repeat of succinyl-transferase I862_07280 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family I862_07285 PF01061 I862_07285 I862_07290 PF00005 ABC transporter I862_07310 PF00534 Glycosyl transferases group 1 I862_07310 PF13439 Glycosyltransferase Family 4 I862_07315 PF00534 Glycosyl transferases group 1 I862_07315 PF13439 Glycosyltransferase Family 4 I862_07330 PF02350 UDP-N-acetylglucosamine 2-epimerase I862_07335 PF13439 Glycosyltransferase Family 4 I862_07335 PF13692 Glycosyl transferases group 1 I862_07340 PF07690 Major Facilitator Superfamily I862_07345 PF00884 Sulfatase I862_07345 PF08019 I862_07345 I862_07350 PF14441 I862_07350 I862_07355 PF00023 Ankyrin repeat I862_07355 PF12796 Ankyrin repeats (3 copies) I862_07370 PF02452 PemK-like protein I862_07390 PF13479 I862_07390 I862_07400 PF12705 PD-(D/E)XK nuclease superfamily I862_07410 PF13481 AAA domain I862_07425 PF02195 ParB-like nuclease domain I862_07430 PF12796 Ankyrin repeats (3 copies) I862_07450 PF14441 I862_07450 I862_07455 PF12796 Ankyrin repeats (3 copies) I862_07475 PF12796 Ankyrin repeats (3 copies) I862_07480 PF12796 Ankyrin repeats (3 copies) I862_07485 PF12796 Ankyrin repeats (3 copies) I862_07485 PF13637 Ankyrin repeats (many copies) I862_07510 PF01476 LysM domain I862_07520 PF01476 LysM domain I862_07520 PF07517 SecA DEAD-like domain I862_07520 PF14412 I862_07520 I862_07535 PF00589 Phage integrase family I862_07535 PF13356 Domain of unknown function (DUF4102) I862_07535 PF14659 Phage integrase, N-terminal SAM-like domain I862_07540 PF00023 Ankyrin repeat I862_07540 PF13857 Ankyrin repeats (many copies) I862_07545 PF00012 Hsp70 protein I862_07555 PF01165 Ribosomal protein S21 I862_07560 PF00892 EamA-like transporter family I862_07590 PF00691 OmpA family I862_07595 PF00132 Bacterial transferase hexapeptide (six repeats) I862_07595 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD I862_07595 PF14602 Hexapeptide repeat of succinyl-transferase I862_07600 PF07977 FabA-like domain I862_07605 PF00132 Bacterial transferase hexapeptide (six repeats) I862_07605 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 I862_07610 PF06230 Protein of unknown function (DUF1009) I862_07615 PF02224 Cytidylate kinase I862_07620 PF00575 S1 RNA binding domain I862_07625 PF01636 Phosphotransferase enzyme family I862_07635 PF01433 Peptidase family M1 I862_07635 PF09127 Leukotriene A4 hydrolase, C-terminal I862_07640 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) I862_07645 PF00226 DnaJ domain I862_07645 PF00684 DnaJ central domain I862_07645 PF01556 DnaJ C terminal domain I862_07650 PF00581 Rhodanese-like domain