locus-tag class description EBS_0001 PF11638 DnaA N-terminal domain EBS_0001 PF08299 Bacterial dnaA protein helix-turn-helix EBS_0001 PF00308 Bacterial dnaA protein EBS_0002 PF02767 DNA polymerase III beta subunit, central domain EBS_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain EBS_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain EBS_0003 PF02463 RecF/RecN/SMC N terminal domain EBS_0004 PF01751 Toprim domain EBS_0004 PF00204 DNA gyrase B EBS_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0004 PF18053 DNA gyrase B subunit insert domain EBS_0004 PF00986 DNA gyrase B subunit, carboxyl terminus EBS_0005 PF01553 Acyltransferase EBS_0005 PF00501 AMP-binding enzyme EBS_0008 PF02092 Glycyl-tRNA synthetase beta subunit EBS_0008 PF05746 DALR anticodon binding domain EBS_0009 PF02091 Glycyl-tRNA synthetase alpha subunit EBS_0015 PF00005 ABC transporter EBS_0015 PF00664 ABC transporter transmembrane region EBS_0021 PF16916 Dimerisation domain of Zinc Transporter EBS_0021 PF01545 Cation efflux family EBS_0022 PF00120 Glutamine synthetase, catalytic domain EBS_0022 PF03951 Glutamine synthetase, beta-Grasp domain EBS_0023 PF00989 PAS fold EBS_0023 PF00512 His Kinase A (phospho-acceptor) domain EBS_0023 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0024 PF00158 Sigma-54 interaction domain EBS_0024 PF00072 Response regulator receiver domain EBS_0024 PF02954 Bacterial regulatory protein, Fis family EBS_0029 PF01180 Dihydroorotate dehydrogenase EBS_0030 PF00588 SpoU rRNA Methylase family EBS_0031 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBS_0031 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EBS_0032 PF17827 PrmC N-terminal domain EBS_0032 PF05175 Methyltransferase small domain EBS_0033 PF01678 Diaminopimelate epimerase EBS_0035 PF02899 Phage integrase, N-terminal SAM-like domain EBS_0035 PF00589 Phage integrase family EBS_0037 PF03707 Bacterial signalling protein N terminal repeat EBS_0037 PF13188 PAS domain EBS_0037 PF00563 EAL domain EBS_0037 PF00990 Diguanylate cyclase, GGDEF domain EBS_0038 PF00227 Proteasome subunit EBS_0039 PF00004 ATPase family associated with various cellular activities (AAA) EBS_0039 PF07724 AAA domain (Cdc48 subfamily) EBS_0039 PF10431 C-terminal, D2-small domain, of ClpB protein EBS_0041 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EBS_0042 PF00175 Oxidoreductase NAD-binding domain EBS_0042 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B EBS_0045 PF01209 ubiE/COQ5 methyltransferase family EBS_0047 PF03109 ABC1 family EBS_0049 PF01965 DJ-1/PfpI family EBS_0050 PF04748 Divergent polysaccharide deacetylase EBS_0051 PF03572 Peptidase family S41 EBS_0051 PF13180 PDZ domain EBS_0052 PF01551 Peptidase family M23 EBS_0053 PF01676 Metalloenzyme superfamily EBS_0053 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EBS_0054 PF01022 Bacterial regulatory protein, arsR family EBS_0056 PF02556 Preprotein translocase subunit SecB EBS_0060 PF00970 Oxidoreductase FAD-binding domain EBS_0060 PF00175 Oxidoreductase NAD-binding domain EBS_0060 PF00111 2Fe-2S iron-sulfur cluster binding domain EBS_0062 PF00563 EAL domain EBS_0062 PF00990 Diguanylate cyclase, GGDEF domain EBS_0062 PF03707 Bacterial signalling protein N terminal repeat EBS_0065 PF01432 Peptidase family M3 EBS_0067 PF04011 LemA family EBS_0068 PF00132 Bacterial transferase hexapeptide (six repeats) EBS_0071 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EBS_0071 PF01488 Shikimate / quinate 5-dehydrogenase EBS_0071 PF08501 Shikimate dehydrogenase substrate binding domain EBS_0073 PF00490 Delta-aminolevulinic acid dehydratase EBS_0075 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EBS_0075 PF18766 SWI2/SNF2 ATPase EBS_0075 PF11867 Domain of unknown function (DUF3387) EBS_0077 PF04471 Restriction endonuclease EBS_0077 PF14338 Mrr N-terminal domain EBS_0079 PF01420 Type I restriction modification DNA specificity domain EBS_0082 PF07556 Protein of unknown function (DUF1538) EBS_0085 PF04397 LytTr DNA-binding domain EBS_0085 PF00072 Response regulator receiver domain EBS_0086 PF06580 Histidine kinase EBS_0086 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0087 PF00206 Lyase EBS_0087 PF14698 Argininosuccinate lyase C-terminal EBS_0090 PF00990 Diguanylate cyclase, GGDEF domain EBS_0090 PF00072 Response regulator receiver domain EBS_0092 PF16998 17 kDa outer membrane surface antigen EBS_0092 PF05433 Glycine zipper 2TM domain EBS_0093 PF02230 Phospholipase/Carboxylesterase EBS_0094 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EBS_0096 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase EBS_0097 PF02602 Uroporphyrinogen-III synthase HemD EBS_0098 PF03900 Porphobilinogen deaminase, C-terminal domain EBS_0098 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EBS_0100 PF00085 Thioredoxin EBS_0102 PF01218 Coproporphyrinogen III oxidase EBS_0103 PF01300 Telomere recombination EBS_0104 PF13368 Topoisomerase C-terminal repeat EBS_0104 PF01751 Toprim domain EBS_0104 PF01131 DNA topoisomerase EBS_0105 PF04361 Protein of unknown function (DUF494) EBS_0106 PF02481 DNA recombination-mediator protein A EBS_0106 PF17782 DprA winged helix domain EBS_0108 PF01327 Polypeptide deformylase EBS_0109 PF02911 Formyl transferase, C-terminal domain EBS_0109 PF00551 Formyl transferase EBS_0110 PF01029 NusB family EBS_0110 PF01189 16S rRNA methyltransferase RsmB/F EBS_0112 PF00512 His Kinase A (phospho-acceptor) domain EBS_0112 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0112 PF00672 HAMP domain EBS_0112 PF00989 PAS fold EBS_0113 PF00158 Sigma-54 interaction domain EBS_0113 PF00072 Response regulator receiver domain EBS_0113 PF02954 Bacterial regulatory protein, Fis family EBS_0114 PF02254 TrkA-N domain EBS_0114 PF02080 TrkA-C domain EBS_0116 PF02386 Cation transport protein EBS_0118 PF01367 5'-3' exonuclease, C-terminal SAM fold EBS_0118 PF00476 DNA polymerase family A EBS_0118 PF01612 3'-5' exonuclease EBS_0118 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EBS_0120 PF00365 Phosphofructokinase EBS_0122 PF05191 Adenylate kinase, active site lid EBS_0124 PF17283 SprT-like zinc ribbon domain EBS_0124 PF10263 SprT-like family EBS_0125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBS_0126 PF03707 Bacterial signalling protein N terminal repeat EBS_0126 PF00563 EAL domain EBS_0126 PF00990 Diguanylate cyclase, GGDEF domain EBS_0128 PF00270 DEAD/DEAH box helicase EBS_0128 PF12300 ATP-dependent RNA helicase RhlB EBS_0128 PF00271 Helicase conserved C-terminal domain EBS_0129 PF00085 Thioredoxin EBS_0130 PF07497 Rho termination factor, RNA-binding domain EBS_0130 PF07498 Rho termination factor, N-terminal domain EBS_0130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBS_0131 PF00483 Nucleotidyl transferase EBS_0135 PF08274 PhnA Zinc-Ribbon EBS_0135 PF03831 PhnA domain EBS_0136 PF04055 Radical SAM superfamily EBS_0137 PF03099 Biotin/lipoate A/B protein ligase family EBS_0138 PF04359 Protein of unknown function (DUF493) EBS_0139 PF01063 Amino-transferase class IV EBS_0140 PF00768 D-alanyl-D-alanine carboxypeptidase EBS_0140 PF07943 Penicillin-binding protein 5, C-terminal domain EBS_0141 PF05036 Sporulation related domain EBS_0141 PF03330 Lytic transglycolase EBS_0142 PF13406 Transglycosylase SLT domain EBS_0143 PF01098 Cell cycle protein EBS_0144 PF03717 Penicillin-binding Protein dimerisation domain EBS_0144 PF00905 Penicillin binding protein transpeptidase domain EBS_0145 PF04093 rod shape-determining protein MreD EBS_0146 PF04085 rod shape-determining protein MreC EBS_0148 PF02686 Glu-tRNAGln amidotransferase C subunit EBS_0149 PF01425 Amidase EBS_0150 PF02934 GatB/GatE catalytic domain EBS_0150 PF02637 GatB domain EBS_0151 PF00990 Diguanylate cyclase, GGDEF domain EBS_0152 PF05175 Methyltransferase small domain EBS_0154 PF00899 ThiF family EBS_0156 PF05175 Methyltransferase small domain EBS_0156 PF17827 PrmC N-terminal domain EBS_0157 PF03462 PCRF domain EBS_0157 PF00472 RF-1 domain EBS_0158 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EBS_0158 PF01488 Shikimate / quinate 5-dehydrogenase EBS_0158 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EBS_0161 PF08544 GHMP kinases C terminal EBS_0161 PF00288 GHMP kinases N terminal domain EBS_0162 PF14572 Phosphoribosyl synthetase-associated domain EBS_0162 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EBS_0163 PF01386 Ribosomal L25p family EBS_0163 PF14693 Ribosomal protein TL5, C-terminal domain EBS_0164 PF01195 Peptidyl-tRNA hydrolase EBS_0165 PF03176 MMPL family EBS_0168 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EBS_0168 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EBS_0168 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EBS_0169 PF03144 Elongation factor Tu domain 2 EBS_0169 PF00009 Elongation factor Tu GTP binding domain EBS_0169 PF03143 Elongation factor Tu C-terminal domain EBS_0170 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EBS_0171 PF00467 KOW motif EBS_0171 PF02357 Transcription termination factor nusG EBS_0172 PF03946 Ribosomal protein L11, N-terminal domain EBS_0172 PF00298 Ribosomal protein L11, RNA binding domain EBS_0173 PF00687 Ribosomal protein L1p/L10e family EBS_0174 PF00466 Ribosomal protein L10 EBS_0175 PF00542 Ribosomal protein L7/L12 C-terminal domain EBS_0175 PF16320 Ribosomal protein L7/L12 dimerisation domain EBS_0176 PF04560 RNA polymerase Rpb2, domain 7 EBS_0176 PF00562 RNA polymerase Rpb2, domain 6 EBS_0176 PF04565 RNA polymerase Rpb2, domain 3 EBS_0176 PF10385 RNA polymerase beta subunit external 1 domain EBS_0176 PF04563 RNA polymerase beta subunit EBS_0176 PF04561 RNA polymerase Rpb2, domain 2 EBS_0177 PF04983 RNA polymerase Rpb1, domain 3 EBS_0177 PF00623 RNA polymerase Rpb1, domain 2 EBS_0177 PF04997 RNA polymerase Rpb1, domain 1 EBS_0177 PF04998 RNA polymerase Rpb1, domain 5 EBS_0177 PF05000 RNA polymerase Rpb1, domain 4 EBS_0178 PF00164 Ribosomal protein S12/S23 EBS_0179 PF00177 Ribosomal protein S7p/S5e EBS_0180 PF00009 Elongation factor Tu GTP binding domain EBS_0180 PF00679 Elongation factor G C-terminus EBS_0180 PF14492 Elongation Factor G, domain II EBS_0180 PF03144 Elongation factor Tu domain 2 EBS_0180 PF03764 Elongation factor G, domain IV EBS_0181 PF03143 Elongation factor Tu C-terminal domain EBS_0181 PF03144 Elongation factor Tu domain 2 EBS_0181 PF00009 Elongation factor Tu GTP binding domain EBS_0182 PF00338 Ribosomal protein S10p/S20e EBS_0183 PF00297 Ribosomal protein L3 EBS_0184 PF00573 Ribosomal protein L4/L1 family EBS_0185 PF00276 Ribosomal protein L23 EBS_0186 PF00181 Ribosomal Proteins L2, RNA binding domain EBS_0186 PF03947 Ribosomal Proteins L2, C-terminal domain EBS_0187 PF00203 Ribosomal protein S19 EBS_0188 PF00237 Ribosomal protein L22p/L17e EBS_0189 PF07650 KH domain EBS_0189 PF00189 Ribosomal protein S3, C-terminal domain EBS_0190 PF00252 Ribosomal protein L16p/L10e EBS_0191 PF00831 Ribosomal L29 protein EBS_0192 PF00366 Ribosomal protein S17 EBS_0193 PF00238 Ribosomal protein L14p/L23e EBS_0194 PF00467 KOW motif EBS_0194 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EBS_0195 PF00281 Ribosomal protein L5 EBS_0195 PF00673 ribosomal L5P family C-terminus EBS_0196 PF00253 Ribosomal protein S14p/S29e EBS_0197 PF00410 Ribosomal protein S8 EBS_0198 PF00347 Ribosomal protein L6 EBS_0199 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EBS_0200 PF00333 Ribosomal protein S5, N-terminal domain EBS_0200 PF03719 Ribosomal protein S5, C-terminal domain EBS_0201 PF00327 Ribosomal protein L30p/L7e EBS_0202 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EBS_0203 PF00344 SecY translocase EBS_0204 PF00444 Ribosomal protein L36 EBS_0205 PF00416 Ribosomal protein S13/S18 EBS_0206 PF00411 Ribosomal protein S11 EBS_0207 PF01479 S4 domain EBS_0207 PF00163 Ribosomal protein S4/S9 N-terminal domain EBS_0208 PF01000 RNA polymerase Rpb3/RpoA insert domain EBS_0208 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EBS_0208 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EBS_0209 PF01196 Ribosomal protein L17 EBS_0211 PF04055 Radical SAM superfamily EBS_0212 PF00270 DEAD/DEAH box helicase EBS_0212 PF00271 Helicase conserved C-terminal domain EBS_0212 PF17191 RecG wedge domain EBS_0213 PF01894 Uncharacterised protein family UPF0047 EBS_0215 PF01042 Endoribonuclease L-PSP EBS_0216 PF00795 Carbon-nitrogen hydrolase EBS_0217 PF03471 Transporter associated domain EBS_0217 PF00571 CBS domain EBS_0218 PF02130 Uncharacterized protein family UPF0054 EBS_0219 PF02562 PhoH-like protein EBS_0220 PF01938 TRAM domain EBS_0220 PF00919 Uncharacterized protein family UPF0004 EBS_0220 PF04055 Radical SAM superfamily EBS_0222 PF01384 Phosphate transporter family EBS_0223 PF00398 Ribosomal RNA adenine dimethylase EBS_0225 PF00436 Single-strand binding protein family EBS_0226 PF07690 Major Facilitator Superfamily EBS_0227 PF17760 UvrA interaction domain EBS_0227 PF17755 UvrA DNA-binding domain EBS_0228 PF01641 SelR domain EBS_0229 PF04345 Chorismate lyase EBS_0230 PF01040 UbiA prenyltransferase family EBS_0232 PF01258 Prokaryotic dksA/traR C4-type zinc finger EBS_0233 PF00156 Phosphoribosyl transferase domain EBS_0235 PF06968 Biotin and Thiamin Synthesis associated domain EBS_0235 PF04055 Radical SAM superfamily EBS_0236 PF00155 Aminotransferase class I and II EBS_0237 PF00561 alpha/beta hydrolase fold EBS_0238 PF08241 Methyltransferase domain EBS_0243 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBS_0244 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EBS_0245 PF00510 Cytochrome c oxidase subunit III EBS_0249 PF01040 UbiA prenyltransferase family EBS_0250 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBS_0253 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EBS_0253 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EBS_0254 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EBS_0254 PF12801 4Fe-4S binding domain EBS_0254 PF13746 4Fe-4S dicluster domain EBS_0257 PF00072 Response regulator receiver domain EBS_0257 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0257 PF00512 His Kinase A (phospho-acceptor) domain EBS_0257 PF09456 RcsC Alpha-Beta-Loop (ABL) EBS_0259 PF02321 Outer membrane efflux protein EBS_0264 PF07517 SecA DEAD-like domain EBS_0264 PF01043 SecA preprotein cross-linking domain EBS_0265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBS_0266 PF03597 Cytochrome oxidase maturation protein cbb3-type EBS_0268 PF04545 Sigma-70, region 4 EBS_0268 PF00140 Sigma-70 factor, region 1.2 EBS_0268 PF04542 Sigma-70 region 2 EBS_0269 PF18075 FtsX extracellular domain EBS_0270 PF00005 ABC transporter EBS_0271 PF02881 SRP54-type protein, helical bundle domain EBS_0271 PF00448 SRP54-type protein, GTPase domain EBS_0272 PF00675 Insulinase (Peptidase family M16) EBS_0272 PF05193 Peptidase M16 inactive domain EBS_0273 PF05193 Peptidase M16 inactive domain EBS_0275 PF01467 Cytidylyltransferase-like EBS_0276 PF00037 4Fe-4S binding domain EBS_0278 PF00034 Cytochrome c EBS_0279 PF00034 Cytochrome c EBS_0283 PF00005 ABC transporter EBS_0285 PF08668 HDOD domain EBS_0285 PF00563 EAL domain EBS_0287 PF00471 Ribosomal protein L33 EBS_0288 PF00830 Ribosomal L28 family EBS_0289 PF00999 Sodium/hydrogen exchanger family EBS_0290 PF04002 RadC-like JAB domain EBS_0291 PF02441 Flavoprotein EBS_0291 PF04127 DNA / pantothenate metabolism flavoprotein EBS_0292 PF00692 dUTPase EBS_0293 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBS_0293 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBS_0293 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBS_0293 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBS_0294 PF00696 Amino acid kinase family EBS_0295 PF00440 Bacterial regulatory proteins, tetR family EBS_0297 PF00156 Phosphoribosyl transferase domain EBS_0298 PF03372 Endonuclease/Exonuclease/phosphatase family EBS_0299 PF07690 Major Facilitator Superfamily EBS_0303 PF02594 Uncharacterised ACR, YggU family COG1872 EBS_0304 PF02325 YGGT family EBS_0305 PF14748 Pyrroline-5-carboxylate reductase dimerisation EBS_0305 PF03807 NADP oxidoreductase coenzyme F420-dependent EBS_0306 PF01168 Alanine racemase, N-terminal domain EBS_0307 PF00437 Type II/IV secretion system protein EBS_0308 PF00437 Type II/IV secretion system protein EBS_0309 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B EBS_0309 PF00175 Oxidoreductase NAD-binding domain EBS_0312 PF07298 NnrU protein EBS_0313 PF00994 Probable molybdopterin binding domain EBS_0314 PF03453 MoeA N-terminal region (domain I and II) EBS_0314 PF03454 MoeA C-terminal region (domain IV) EBS_0314 PF00994 Probable molybdopterin binding domain EBS_0315 PF02597 ThiS family EBS_0316 PF02391 MoaE protein EBS_0318 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0318 PF00512 His Kinase A (phospho-acceptor) domain EBS_0321 PF01556 DnaJ C terminal domain EBS_0321 PF00226 DnaJ domain EBS_0324 PF00462 Glutaredoxin EBS_0324 PF08534 Redoxin EBS_0325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBS_0325 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBS_0326 PF01434 Peptidase family M41 EBS_0326 PF06480 FtsH Extracellular EBS_0326 PF17862 AAA+ lid domain EBS_0326 PF00004 ATPase family associated with various cellular activities (AAA) EBS_0327 PF13180 PDZ domain EBS_0329 PF03264 NapC/NirT cytochrome c family, N-terminal region EBS_0334 PF00639 PPIC-type PPIASE domain EBS_0334 PF09312 SurA N-terminal domain EBS_0335 PF00578 AhpC/TSA family EBS_0337 PF03918 Cytochrome C biogenesis protein EBS_0338 PF08534 Redoxin EBS_0339 PF01578 Cytochrome C assembly protein EBS_0339 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EBS_0340 PF03100 CcmE EBS_0341 PF01578 Cytochrome C assembly protein EBS_0342 PF03379 CcmB protein EBS_0343 PF00005 ABC transporter EBS_0344 PF00027 Cyclic nucleotide-binding domain EBS_0344 PF13545 Crp-like helix-turn-helix domain EBS_0345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EBS_0347 PF04715 Anthranilate synthase component I, N terminal region EBS_0347 PF00425 chorismate binding enzyme EBS_0348 PF00117 Glutamine amidotransferase class-I EBS_0349 PF02885 Glycosyl transferase family, helical bundle domain EBS_0349 PF00591 Glycosyl transferase family, a/b domain EBS_0350 PF00218 Indole-3-glycerol phosphate synthase EBS_0351 PF13545 Crp-like helix-turn-helix domain EBS_0351 PF00027 Cyclic nucleotide-binding domain EBS_0353 PF02675 S-adenosylmethionine decarboxylase EBS_0354 PF00149 Calcineurin-like phosphoesterase EBS_0355 PF04379 ApaG domain EBS_0358 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBS_0358 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBS_0359 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EBS_0360 PF00639 PPIC-type PPIASE domain EBS_0360 PF09312 SurA N-terminal domain EBS_0361 PF03968 OstA-like protein EBS_0361 PF04453 LPS transport system D EBS_0362 PF01636 Phosphotransferase enzyme family EBS_0368 PF16199 Radical_SAM C-terminal domain EBS_0368 PF04055 Radical SAM superfamily EBS_0369 PF13597 Anaerobic ribonucleoside-triphosphate reductase EBS_0369 PF03477 ATP cone domain EBS_0372 PF00005 ABC transporter EBS_0373 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EBS_0373 PF02885 Glycosyl transferase family, helical bundle domain EBS_0373 PF00591 Glycosyl transferase family, a/b domain EBS_0378 PF04231 Endonuclease I EBS_0380 PF02574 Homocysteine S-methyltransferase EBS_0380 PF02965 Vitamin B12 dependent methionine synthase, activation domain EBS_0380 PF02310 B12 binding domain EBS_0380 PF00809 Pterin binding enzyme EBS_0380 PF02607 B12 binding domain EBS_0381 PF01895 PhoU domain EBS_0383 PF00990 Diguanylate cyclase, GGDEF domain EBS_0384 PF04408 Helicase associated domain (HA2) EBS_0384 PF08482 ATP-dependent helicase C-terminal EBS_0384 PF00271 Helicase conserved C-terminal domain EBS_0384 PF00270 DEAD/DEAH box helicase EBS_0389 PF02142 MGS-like domain EBS_0389 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBS_0389 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EBS_0394 PF13533 Biotin-lipoyl like EBS_0395 PF00873 AcrB/AcrD/AcrF family EBS_0399 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0399 PF00512 His Kinase A (phospho-acceptor) domain EBS_0400 PF03600 Citrate transporter EBS_0400 PF02080 TrkA-C domain EBS_0401 PF17176 tRNA-binding domain EBS_0401 PF05127 Helicase EBS_0401 PF08351 Domain of unknown function (DUF1726) EBS_0401 PF13718 GNAT acetyltransferase 2 EBS_0402 PF00578 AhpC/TSA family EBS_0403 PF06962 Putative rRNA methylase EBS_0405 PF01553 Acyltransferase EBS_0407 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EBS_0407 PF02779 Transketolase, pyrimidine binding domain EBS_0407 PF02780 Transketolase, C-terminal domain EBS_0410 PF03738 Glutathionylspermidine synthase preATP-grasp EBS_0411 PF01658 Myo-inositol-1-phosphate synthase EBS_0412 PF01066 CDP-alcohol phosphatidyltransferase EBS_0412 PF12804 MobA-like NTP transferase domain EBS_0414 PF00485 Phosphoribulokinase / Uridine kinase family EBS_0415 PF02913 FAD linked oxidases, C-terminal domain EBS_0415 PF01565 FAD binding domain EBS_0416 PF04972 BON domain EBS_0417 PF13580 SIS domain EBS_0418 PF02021 Uncharacterised protein family UPF0102 EBS_0419 PF04348 LppC putative lipoprotein EBS_0420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBS_0422 PF02381 MraZ protein, putative antitoxin-like EBS_0423 PF01795 MraW methylase family EBS_0425 PF00905 Penicillin binding protein transpeptidase domain EBS_0425 PF03717 Penicillin-binding Protein dimerisation domain EBS_0426 PF01225 Mur ligase family, catalytic domain EBS_0426 PF02875 Mur ligase family, glutamate ligase domain EBS_0426 PF08245 Mur ligase middle domain EBS_0427 PF02875 Mur ligase family, glutamate ligase domain EBS_0427 PF08245 Mur ligase middle domain EBS_0427 PF01225 Mur ligase family, catalytic domain EBS_0428 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EBS_0428 PF00953 Glycosyl transferase family 4 EBS_0429 PF08245 Mur ligase middle domain EBS_0429 PF02875 Mur ligase family, glutamate ligase domain EBS_0430 PF01098 Cell cycle protein EBS_0431 PF03033 Glycosyltransferase family 28 N-terminal domain EBS_0431 PF04101 Glycosyltransferase family 28 C-terminal domain EBS_0432 PF01225 Mur ligase family, catalytic domain EBS_0432 PF02875 Mur ligase family, glutamate ligase domain EBS_0432 PF08245 Mur ligase middle domain EBS_0433 PF01565 FAD binding domain EBS_0433 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EBS_0434 PF07478 D-ala D-ala ligase C-terminus EBS_0434 PF01820 D-ala D-ala ligase N-terminus EBS_0435 PF03799 Cell division protein FtsQ EBS_0435 PF08478 POTRA domain, FtsQ-type EBS_0436 PF02491 SHS2 domain inserted in FTSA EBS_0437 PF00091 Tubulin/FtsZ family, GTPase domain EBS_0437 PF12327 FtsZ family, C-terminal domain EBS_0438 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EBS_0440 PF01551 Peptidase family M23 EBS_0440 PF08525 Opacity-associated protein A N-terminal motif EBS_0440 PF01476 LysM domain EBS_0441 PF07516 SecA Wing and Scaffold domain EBS_0441 PF01043 SecA preprotein cross-linking domain EBS_0441 PF07517 SecA DEAD-like domain EBS_0441 PF02810 SEC-C motif EBS_0442 PF01960 ArgJ family EBS_0443 PF00293 NUDIX domain EBS_0444 PF03884 DNA gyrase inhibitor YacG EBS_0445 PF07072 Cell division protein EBS_0446 PF01121 Dephospho-CoA kinase EBS_0449 PF00482 Type II secretion system (T2SS), protein F EBS_0450 PF00437 Type II/IV secretion system protein EBS_0450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBS_0451 PF13333 Integrase core domain EBS_0451 PF00665 Integrase core domain EBS_0451 PF13276 HTH-like domain EBS_0452 PF01527 Transposase EBS_0453 PF00004 ATPase family associated with various cellular activities (AAA) EBS_0453 PF07724 AAA domain (Cdc48 subfamily) EBS_0453 PF17871 AAA lid domain EBS_0453 PF02861 Clp amino terminal domain, pathogenicity island component EBS_0453 PF10431 C-terminal, D2-small domain, of ClpB protein EBS_0454 PF01327 Polypeptide deformylase EBS_0457 PF01479 S4 domain EBS_0457 PF00849 RNA pseudouridylate synthase EBS_0458 PF13525 Outer membrane lipoprotein EBS_0459 PF00543 Nitrogen regulatory protein P-II EBS_0460 PF00795 Carbon-nitrogen hydrolase EBS_0460 PF02540 NAD synthase EBS_0461 PF02629 CoA binding domain EBS_0461 PF00549 CoA-ligase EBS_0462 PF00549 CoA-ligase EBS_0462 PF08442 ATP-grasp domain EBS_0463 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0463 PF00512 His Kinase A (phospho-acceptor) domain EBS_0465 PF13333 Integrase core domain EBS_0465 PF13276 HTH-like domain EBS_0465 PF00665 Integrase core domain EBS_0468 PF00072 Response regulator receiver domain EBS_0468 PF01966 HD domain EBS_0471 PF00005 ABC transporter EBS_0472 PF01032 FecCD transport family EBS_0474 PF00293 NUDIX domain EBS_0475 PF05524 PEP-utilising enzyme, N-terminal EBS_0475 PF01590 GAF domain EBS_0475 PF00391 PEP-utilising enzyme, mobile domain EBS_0475 PF02896 PEP-utilising enzyme, TIM barrel domain EBS_0476 PF01645 Conserved region in glutamate synthase EBS_0477 PF17269 Family of unknown function (DUF5335) EBS_0478 PF08497 Radical SAM N-terminal EBS_0478 PF11842 Domain of unknown function (DUF3362) EBS_0478 PF04055 Radical SAM superfamily EBS_0480 PF06271 RDD family EBS_0481 PF03880 DbpA RNA binding domain EBS_0481 PF00271 Helicase conserved C-terminal domain EBS_0481 PF00270 DEAD/DEAH box helicase EBS_0489 PF10576 Iron-sulfur binding domain of endonuclease III EBS_0489 PF00730 HhH-GPD superfamily base excision DNA repair protein EBS_0489 PF00633 Helix-hairpin-helix motif EBS_0491 PF02508 Rnf-Nqr subunit, membrane protein EBS_0492 PF04205 FMN-binding domain EBS_0493 PF03116 NQR2, RnfD, RnfE family EBS_0494 PF13375 RnfC Barrel sandwich hybrid domain EBS_0494 PF10531 SLBB domain EBS_0494 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EBS_0494 PF12838 4Fe-4S dicluster domain EBS_0495 PF04060 Putative Fe-S cluster EBS_0496 PF02508 Rnf-Nqr subunit, membrane protein EBS_0499 PF03150 Di-haem cytochrome c peroxidase EBS_0499 PF00034 Cytochrome c EBS_0499 PF14376 Haem-binding domain EBS_0500 PF00990 Diguanylate cyclase, GGDEF domain EBS_0500 PF00563 EAL domain EBS_0500 PF08448 PAS fold EBS_0501 PF09334 tRNA synthetases class I (M) EBS_0501 PF01588 Putative tRNA binding domain EBS_0502 PF10609 NUBPL iron-transfer P-loop NTPase EBS_0504 PF08402 TOBE domain EBS_0504 PF00005 ABC transporter EBS_0505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBS_0505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBS_0506 PF00202 Aminotransferase class-III EBS_0509 PF00733 Asparagine synthase EBS_0509 PF13537 Glutamine amidotransferase domain EBS_0510 PF00462 Glutaredoxin EBS_0511 PF00929 Exonuclease EBS_0512 PF04333 MlaA lipoprotein EBS_0513 PF00561 alpha/beta hydrolase fold EBS_0518 PF02580 D-Tyr-tRNA(Tyr) deacylase EBS_0519 PF00475 Imidazoleglycerol-phosphate dehydratase EBS_0520 PF00117 Glutamine amidotransferase class-I EBS_0521 PF00977 Histidine biosynthesis protein EBS_0522 PF00977 Histidine biosynthesis protein EBS_0523 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EBS_0525 PF02416 mttA/Hcf106 family EBS_0526 PF00902 Sec-independent protein translocase protein (TatC) EBS_0527 PF03190 Protein of unknown function, DUF255 EBS_0530 PF01909 Nucleotidyltransferase domain EBS_0531 PF00140 Sigma-70 factor, region 1.2 EBS_0531 PF04542 Sigma-70 region 2 EBS_0531 PF04546 Sigma-70, non-essential region EBS_0531 PF04545 Sigma-70, region 4 EBS_0531 PF04539 Sigma-70 region 3 EBS_0531 PF03979 Sigma-70 factor, region 1.1 EBS_0532 PF08278 DNA primase DnaG DnaB-binding EBS_0532 PF01807 CHC2 zinc finger EBS_0532 PF10410 DnaB-helicase binding domain of primase EBS_0532 PF08275 DNA primase catalytic core, N-terminal domain EBS_0533 PF09424 Yqey-like protein EBS_0534 PF01165 Ribosomal protein S21 EBS_0535 PF00814 Glycoprotease family EBS_0536 PF02660 Glycerol-3-phosphate acyltransferase EBS_0542 PF01370 NAD dependent epimerase/dehydratase family EBS_0546 PF01551 Peptidase family M23 EBS_0546 PF10145 Phage-related minor tail protein EBS_0546 PF01464 Transglycosylase SLT domain EBS_0547 PF00459 Inositol monophosphatase family EBS_0548 PF13183 4Fe-4S dicluster domain EBS_0548 PF02754 Cysteine-rich domain EBS_0551 PF00570 HRDC domain EBS_0551 PF01612 3'-5' exonuclease EBS_0553 PF01225 Mur ligase family, catalytic domain EBS_0553 PF02875 Mur ligase family, glutamate ligase domain EBS_0553 PF08245 Mur ligase middle domain EBS_0554 PF02441 Flavoprotein EBS_0555 PF00909 Ammonium Transporter Family EBS_0556 PF17831 Pyruvate dehydrogenase E1 component middle domain EBS_0556 PF00456 Transketolase, thiamine diphosphate binding domain EBS_0557 PF02817 e3 binding domain EBS_0557 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBS_0557 PF00364 Biotin-requiring enzyme EBS_0558 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBS_0558 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBS_0559 PF00561 alpha/beta hydrolase fold EBS_0561 PF00348 Polyprenyl synthetase EBS_0562 PF00829 Ribosomal prokaryotic L21 protein EBS_0563 PF01016 Ribosomal L27 protein EBS_0564 PF01018 GTP1/OBG EBS_0564 PF01926 50S ribosome-binding GTPase EBS_0565 PF00696 Amino acid kinase family EBS_0565 PF01472 PUA domain EBS_0567 PF00672 HAMP domain EBS_0567 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBS_0568 PF01649 Ribosomal protein S20 EBS_0569 PF03023 Lipid II flippase MurJ EBS_0570 PF01252 Signal peptidase (SPase) II EBS_0571 PF01687 Riboflavin kinase EBS_0571 PF06574 FAD synthetase EBS_0572 PF06827 Zinc finger found in FPG and IleRS EBS_0572 PF00133 tRNA synthetases class I (I, L, M and V) EBS_0572 PF08264 Anticodon-binding domain of tRNA EBS_0574 PF01497 Periplasmic binding protein EBS_0575 PF01510 N-acetylmuramoyl-L-alanine amidase EBS_0579 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBS_0580 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EBS_0580 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EBS_0582 PF00672 HAMP domain EBS_0582 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBS_0583 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBS_0585 PF01722 BolA-like protein EBS_0587 PF02817 e3 binding domain EBS_0587 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBS_0587 PF00364 Biotin-requiring enzyme EBS_0588 PF00676 Dehydrogenase E1 component EBS_0588 PF02779 Transketolase, pyrimidine binding domain EBS_0588 PF16870 2-oxoglutarate dehydrogenase C-terminal EBS_0588 PF16078 2-oxoglutarate dehydrogenase N-terminus EBS_0589 PF00873 AcrB/AcrD/AcrF family EBS_0591 PF08448 PAS fold EBS_0591 PF00990 Diguanylate cyclase, GGDEF domain EBS_0592 PF01925 Sulfite exporter TauE/SafE EBS_0598 PF17656 FlgA N-terminal domain EBS_0598 PF13144 Chaperone for flagella basal body P-ring formation EBS_0599 PF00072 Response regulator receiver domain EBS_0599 PF01584 CheW-like domain EBS_0600 PF03705 CheR methyltransferase, all-alpha domain EBS_0600 PF01739 CheR methyltransferase, SAM binding domain EBS_0601 PF00460 Flagella basal body rod protein EBS_0602 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBS_0602 PF00460 Flagella basal body rod protein EBS_0603 PF03963 Flagellar hook capping protein - N-terminal region EBS_0604 PF07559 Flagellar basal body protein FlaE EBS_0604 PF00460 Flagella basal body rod protein EBS_0604 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBS_0605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBS_0605 PF00460 Flagella basal body rod protein EBS_0607 PF00460 Flagella basal body rod protein EBS_0607 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBS_0608 PF02107 Flagellar L-ring protein EBS_0609 PF02119 Flagellar P-ring protein EBS_0611 PF00669 Bacterial flagellin N-terminal helical region EBS_0620 PF01541 GIY-YIG catalytic domain EBS_0625 PF00268 Ribonucleotide reductase, small chain EBS_0626 PF03477 ATP cone domain EBS_0626 PF02867 Ribonucleotide reductase, barrel domain EBS_0626 PF00317 Ribonucleotide reductase, all-alpha domain EBS_0628 PF03793 PASTA domain EBS_0628 PF00069 Protein kinase domain EBS_0629 PF04358 DsrC like protein EBS_0630 PF07690 Major Facilitator Superfamily EBS_0631 PF18267 Rubredoxin NAD+ reductase C-terminal domain EBS_0631 PF04324 BFD-like [2Fe-2S] binding domain EBS_0631 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EBS_0631 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBS_0631 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EBS_0633 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EBS_0633 PF01568 Molydopterin dinucleotide binding domain EBS_0633 PF00384 Molybdopterin oxidoreductase EBS_0634 PF13247 4Fe-4S dicluster domain EBS_0634 PF12800 4Fe-4S binding domain EBS_0634 PF09163 Formate dehydrogenase N, transmembrane EBS_0635 PF00501 AMP-binding enzyme EBS_0637 PF13378 Enolase C-terminal domain-like EBS_0641 PF00378 Enoyl-CoA hydratase/isomerase EBS_0642 PF01040 UbiA prenyltransferase family EBS_0643 PF01568 Molydopterin dinucleotide binding domain EBS_0643 PF04324 BFD-like [2Fe-2S] binding domain EBS_0643 PF00384 Molybdopterin oxidoreductase EBS_0643 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EBS_0644 PF03205 Molybdopterin guanine dinucleotide synthesis protein B EBS_0649 PF00916 Sulfate permease family EBS_0649 PF01740 STAS domain EBS_0650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBS_0653 PF07715 TonB-dependent Receptor Plug Domain EBS_0653 PF00593 TonB dependent receptor EBS_0659 PF03808 Glycosyl transferase WecB/TagA/CpsF family EBS_0660 PF00953 Glycosyl transferase family 4 EBS_0661 PF01370 NAD dependent epimerase/dehydratase family EBS_0667 PF13614 AAA domain EBS_0671 PF03144 Elongation factor Tu domain 2 EBS_0671 PF00009 Elongation factor Tu GTP binding domain EBS_0671 PF03764 Elongation factor G, domain IV EBS_0671 PF14492 Elongation Factor G, domain II EBS_0671 PF00679 Elongation factor G C-terminus EBS_0680 PF00485 Phosphoribulokinase / Uridine kinase family EBS_0681 PF01475 Ferric uptake regulator family EBS_0682 PF00950 ABC 3 transport family EBS_0683 PF00005 ABC transporter EBS_0685 PF00731 AIR carboxylase EBS_0686 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EBS_0686 PF02222 ATP-grasp domain EBS_0687 PF01740 STAS domain EBS_0687 PF00916 Sulfate permease family EBS_0688 PF00313 'Cold-shock' DNA-binding domain EBS_0689 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) EBS_0694 PF08406 CbbQ/NirQ/NorQ C-terminal EBS_0694 PF07728 AAA domain (dynein-related subfamily) EBS_0695 PF00101 Ribulose bisphosphate carboxylase, small chain EBS_0696 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain EBS_0696 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain EBS_0697 PF00092 von Willebrand factor type A domain EBS_0698 PF08406 CbbQ/NirQ/NorQ C-terminal EBS_0698 PF07728 AAA domain (dynein-related subfamily) EBS_0699 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain EBS_0699 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain EBS_0700 PF03466 LysR substrate binding domain EBS_0700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBS_0701 PF12170 DNA polymerase III tau subunit V interacting with alpha EBS_0701 PF12169 DNA polymerase III subunits gamma and tau domain III EBS_0701 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EBS_0702 PF02575 YbaB/EbfC DNA-binding family EBS_0703 PF02132 RecR protein EBS_0703 PF13662 Toprim domain EBS_0704 PF01230 HIT domain EBS_0706 PF17941 Polyphosphate kinase C-terminal domain 1 EBS_0706 PF13090 Polyphosphate kinase C-terminal domain 2 EBS_0706 PF02503 Polyphosphate kinase middle domain EBS_0706 PF13089 Polyphosphate kinase N-terminal domain EBS_0707 PF07687 Peptidase dimerisation domain EBS_0707 PF01546 Peptidase family M20/M25/M40 EBS_0708 PF03960 ArsC family EBS_0709 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EBS_0709 PF00132 Bacterial transferase hexapeptide (six repeats) EBS_0709 PF14602 Hexapeptide repeat of succinyl-transferase EBS_0710 PF00155 Aminotransferase class I and II EBS_0713 PF01842 ACT domain EBS_0713 PF01966 HD domain EBS_0713 PF08335 GlnD PII-uridylyltransferase EBS_0713 PF01909 Nucleotidyltransferase domain EBS_0714 PF00557 Metallopeptidase family M24 EBS_0715 PF00318 Ribosomal protein S2 EBS_0716 PF00889 Elongation factor TS EBS_0717 PF00696 Amino acid kinase family EBS_0718 PF01765 Ribosome recycling factor EBS_0719 PF01255 Putative undecaprenyl diphosphate synthase EBS_0721 PF13288 DXP reductoisomerase C-terminal domain EBS_0721 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EBS_0721 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EBS_0722 PF17820 PDZ domain EBS_0722 PF02163 Peptidase family M50 EBS_0723 PF07244 Surface antigen variable number repeat EBS_0723 PF01103 Surface antigen EBS_0725 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EBS_0725 PF00132 Bacterial transferase hexapeptide (six repeats) EBS_0726 PF07977 FabA-like domain EBS_0727 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EBS_0727 PF00132 Bacterial transferase hexapeptide (six repeats) EBS_0728 PF02684 Lipid-A-disaccharide synthetase EBS_0729 PF01875 Memo-like protein EBS_0730 PF04055 Radical SAM superfamily EBS_0733 PF03600 Citrate transporter EBS_0734 PF00692 dUTPase EBS_0735 PF00551 Formyl transferase EBS_0736 PF02769 AIR synthase related protein, C-terminal domain EBS_0736 PF00586 AIR synthase related protein, N-terminal domain EBS_0738 PF01066 CDP-alcohol phosphatidyltransferase EBS_0739 PF01594 AI-2E family transporter EBS_0740 PF00308 Bacterial dnaA protein EBS_0742 PF03358 NADPH-dependent FMN reductase EBS_0743 PF03960 ArsC family EBS_0746 PF00578 AhpC/TSA family EBS_0750 PF00149 Calcineurin-like phosphoesterase EBS_0753 PF02915 Rubrerythrin EBS_0756 PF07977 FabA-like domain EBS_0757 PF00512 His Kinase A (phospho-acceptor) domain EBS_0757 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0758 PF00072 Response regulator receiver domain EBS_0758 PF00990 Diguanylate cyclase, GGDEF domain EBS_0759 PF03129 Anticodon binding domain EBS_0759 PF04073 Aminoacyl-tRNA editing domain EBS_0759 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBS_0761 PF00563 EAL domain EBS_0761 PF00990 Diguanylate cyclase, GGDEF domain EBS_0761 PF03707 Bacterial signalling protein N terminal repeat EBS_0762 PF12848 ABC transporter EBS_0762 PF00005 ABC transporter EBS_0763 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EBS_0763 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EBS_0764 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBS_0765 PF00464 Serine hydroxymethyltransferase EBS_0766 PF03477 ATP cone domain EBS_0767 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EBS_0767 PF01872 RibD C-terminal domain EBS_0768 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBS_0768 PF00672 HAMP domain EBS_0768 PF02743 Cache domain EBS_0771 PF00440 Bacterial regulatory proteins, tetR family EBS_0772 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBS_0774 PF00005 ABC transporter EBS_0778 PF00348 Polyprenyl synthetase EBS_0779 PF02609 Exonuclease VII small subunit EBS_0781 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0781 PF00204 DNA gyrase B EBS_0781 PF00986 DNA gyrase B subunit, carboxyl terminus EBS_0781 PF01751 Toprim domain EBS_0783 PF00665 Integrase core domain EBS_0783 PF13276 HTH-like domain EBS_0783 PF13333 Integrase core domain EBS_0784 PF01527 Transposase EBS_0785 PF00563 EAL domain EBS_0785 PF00990 Diguanylate cyclase, GGDEF domain EBS_0785 PF08448 PAS fold EBS_0789 PF03989 DNA gyrase C-terminal domain, beta-propeller EBS_0789 PF00521 DNA gyrase/topoisomerase IV, subunit A EBS_0790 PF14814 Bifunctional transglycosylase second domain EBS_0790 PF00905 Penicillin binding protein transpeptidase domain EBS_0790 PF00912 Transglycosylase EBS_0791 PF00478 IMP dehydrogenase / GMP reductase domain EBS_0791 PF00571 CBS domain EBS_0795 PF04851 Type III restriction enzyme, res subunit EBS_0795 PF13307 Helicase C-terminal domain EBS_0802 PF00814 Glycoprotease family EBS_0806 PF04305 Protein of unknown function (DUF455) EBS_0808 PF02666 Phosphatidylserine decarboxylase EBS_0809 PF00266 Aminotransferase class-V EBS_0811 PF08918 PhoQ Sensor EBS_0811 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0812 PF00072 Response regulator receiver domain EBS_0812 PF00486 Transcriptional regulatory protein, C terminal EBS_0814 PF03600 Citrate transporter EBS_0818 PF00072 Response regulator receiver domain EBS_0818 PF00196 Bacterial regulatory proteins, luxR family EBS_0823 PF01479 S4 domain EBS_0824 PF00462 Glutaredoxin EBS_0825 PF11940 Domain of unknown function (DUF3458) Ig-like fold EBS_0825 PF01433 Peptidase family M1 domain EBS_0825 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EBS_0826 PF01903 CbiX EBS_0827 PF07670 Nucleoside recognition EBS_0827 PF07664 Ferrous iron transport protein B C terminus EBS_0827 PF02421 Ferrous iron transport protein B EBS_0830 PF00005 ABC transporter EBS_0830 PF00664 ABC transporter transmembrane region EBS_0831 PF01743 Poly A polymerase head domain EBS_0831 PF12627 Probable RNA and SrmB- binding site of polymerase A EBS_0832 PF00672 HAMP domain EBS_0832 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EBS_0832 PF07730 Histidine kinase EBS_0832 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0833 PF00196 Bacterial regulatory proteins, luxR family EBS_0833 PF00072 Response regulator receiver domain EBS_0834 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EBS_0836 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EBS_0837 PF01406 tRNA synthetases class I (C) catalytic domain EBS_0837 PF09190 DALR domain EBS_0840 PF03193 RsgA GTPase EBS_0843 PF00990 Diguanylate cyclase, GGDEF domain EBS_0843 PF00563 EAL domain EBS_0843 PF00360 Phytochrome region EBS_0843 PF01590 GAF domain EBS_0844 PF00929 Exonuclease EBS_0845 PF08331 Domain of unknown function (DUF1730) EBS_0846 PF03853 YjeF-related protein N-terminus EBS_0846 PF01256 Carbohydrate kinase EBS_0847 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EBS_0848 PF01520 N-acetylmuramoyl-L-alanine amidase EBS_0848 PF11741 AMIN domain EBS_0850 PF01119 DNA mismatch repair protein, C-terminal domain EBS_0850 PF08676 MutL C terminal dimerisation domain EBS_0852 PF17209 Hfq protein EBS_0853 PF01926 50S ribosome-binding GTPase EBS_0853 PF13167 GTP-binding GTPase N-terminal EBS_0853 PF16360 GTP-binding GTPase Middle Region EBS_0854 PF01145 SPFH domain / Band 7 family EBS_0854 PF12221 Bacterial membrane protein N terminal EBS_0855 PF01145 SPFH domain / Band 7 family EBS_0856 PF13393 Histidyl-tRNA synthetase EBS_0857 PF00709 Adenylosuccinate synthetase EBS_0859 PF03707 Bacterial signalling protein N terminal repeat EBS_0859 PF00990 Diguanylate cyclase, GGDEF domain EBS_0859 PF00563 EAL domain EBS_0860 PF13180 PDZ domain EBS_0860 PF00595 PDZ domain EBS_0861 PF00011 Hsp20/alpha crystallin family EBS_0862 PF00677 Lumazine binding domain EBS_0863 PF02445 Quinolinate synthetase A protein EBS_0864 PF00480 ROK family EBS_0867 PF00873 AcrB/AcrD/AcrF family EBS_0874 PF04055 Radical SAM superfamily EBS_0875 PF01132 Elongation factor P (EF-P) OB domain EBS_0875 PF08207 Elongation factor P (EF-P) KOW-like domain EBS_0875 PF09285 Elongation factor P, C-terminal EBS_0876 PF00152 tRNA synthetases class II (D, K and N) EBS_0877 PF00149 Calcineurin-like phosphoesterase EBS_0880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBS_0880 PF14824 Sirohaem biosynthesis protein central EBS_0880 PF10414 Sirohaem synthase dimerisation region EBS_0881 PF00581 Rhodanese-like domain EBS_0882 PF01206 Sulfurtransferase TusA EBS_0883 PF13686 DsrE/DsrF/DrsH-like family EBS_0885 PF03466 LysR substrate binding domain EBS_0885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBS_0887 PF01594 AI-2E family transporter EBS_0891 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBS_0891 PF00072 Response regulator receiver domain EBS_0891 PF01627 Hpt domain EBS_0891 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_0891 PF00672 HAMP domain EBS_0891 PF00512 His Kinase A (phospho-acceptor) domain EBS_0892 PF13638 PIN domain EBS_0892 PF02562 PhoH-like protein EBS_0894 PF01842 ACT domain EBS_0897 PF02805 Metal binding domain of Ada EBS_0897 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EBS_0897 PF12833 Helix-turn-helix domain EBS_0897 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EBS_0899 PF01654 Cytochrome bd terminal oxidase subunit I EBS_0905 PF00384 Molybdopterin oxidoreductase EBS_0905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EBS_0905 PF01568 Molydopterin dinucleotide binding domain EBS_0906 PF13247 4Fe-4S dicluster domain EBS_0906 PF12800 4Fe-4S binding domain EBS_0907 PF04976 DMSO reductase anchor subunit (DmsC) EBS_0908 PF00563 EAL domain EBS_0908 PF00990 Diguanylate cyclase, GGDEF domain EBS_0908 PF03707 Bacterial signalling protein N terminal repeat EBS_0913 PF03692 Putative zinc- or iron-chelating domain EBS_0914 PF00589 Phage integrase family EBS_0914 PF02899 Phage integrase, N-terminal SAM-like domain EBS_0915 PF10411 Disulfide bond isomerase protein N-terminus EBS_0915 PF13098 Thioredoxin-like domain EBS_0917 PF00037 4Fe-4S binding domain EBS_0917 PF11953 Domain of unknown function (DUF3470) EBS_0919 PF00133 tRNA synthetases class I (I, L, M and V) EBS_0919 PF10458 Valyl tRNA synthetase tRNA binding arm EBS_0919 PF08264 Anticodon-binding domain of tRNA EBS_0920 PF04955 HupE / UreJ protein EBS_0922 PF02872 5'-nucleotidase, C-terminal domain EBS_0922 PF00149 Calcineurin-like phosphoesterase EBS_0923 PF02754 Cysteine-rich domain EBS_0923 PF13183 4Fe-4S dicluster domain EBS_0924 PF01565 FAD binding domain EBS_0925 PF02913 FAD linked oxidases, C-terminal domain EBS_0925 PF01565 FAD binding domain EBS_0926 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EBS_0928 PF03480 Bacterial extracellular solute-binding protein, family 7 EBS_0931 PF01614 Bacterial transcriptional regulator EBS_0931 PF09339 IclR helix-turn-helix domain EBS_0932 PF00271 Helicase conserved C-terminal domain EBS_0932 PF00270 DEAD/DEAH box helicase EBS_0933 PF07690 Major Facilitator Superfamily EBS_0934 PF00291 Pyridoxal-phosphate dependent enzyme EBS_0935 PF02080 TrkA-C domain EBS_0935 PF03600 Citrate transporter EBS_0937 PF04358 DsrC like protein EBS_0938 PF02080 TrkA-C domain EBS_0938 PF02254 TrkA-N domain EBS_0938 PF00999 Sodium/hydrogen exchanger family EBS_0939 PF00849 RNA pseudouridylate synthase EBS_0941 PF04204 Homoserine O-succinyltransferase EBS_0943 PF00459 Inositol monophosphatase family EBS_0945 PF18412 Outer-membrane lipoprotein Wza C-terminal domain EBS_0945 PF02563 Polysaccharide biosynthesis/export protein EBS_0945 PF10531 SLBB domain EBS_0948 PF13614 AAA domain EBS_0954 PF00394 Multicopper oxidase EBS_0954 PF07731 Multicopper oxidase EBS_0954 PF07732 Multicopper oxidase EBS_0956 PF13439 Glycosyltransferase Family 4 EBS_0956 PF00534 Glycosyl transferases group 1 EBS_0957 PF13186 Iron-sulfur cluster-binding domain EBS_0957 PF04055 Radical SAM superfamily EBS_0960 PF13401 AAA domain EBS_0960 PF01471 Putative peptidoglycan binding domain EBS_0961 PF00588 SpoU rRNA Methylase family EBS_0962 PF00132 Bacterial transferase hexapeptide (six repeats) EBS_0963 PF02082 Transcriptional regulator EBS_0964 PF00266 Aminotransferase class-V EBS_0965 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) EBS_0966 PF01592 NifU-like N terminal domain EBS_0967 PF01521 Iron-sulphur cluster biosynthesis EBS_0968 PF07743 HSCB C-terminal oligomerisation domain EBS_0969 PF00012 Hsp70 protein EBS_0970 PF00111 2Fe-2S iron-sulfur cluster binding domain EBS_0971 PF04384 Iron-sulphur cluster assembly EBS_0973 PF00334 Nucleoside diphosphate kinase EBS_0974 PF04055 Radical SAM superfamily EBS_0976 PF13464 Domain of unknown function (DUF4115) EBS_0977 PF03129 Anticodon binding domain EBS_0977 PF13393 Histidyl-tRNA synthetase EBS_0978 PF09976 Tetratricopeptide repeat-like domain EBS_0979 PF13360 PQQ-like domain EBS_0980 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EBS_0980 PF01926 50S ribosome-binding GTPase EBS_0982 PF04381 Putative exonuclease, RdgC EBS_0983 PF18337 RapA N-terminal Tudor like domain EBS_0983 PF18339 RapA N-terminal Tudor like domain 1 EBS_0983 PF00176 SNF2 family N-terminal domain EBS_0983 PF12137 RNA polymerase recycling family C-terminal EBS_0983 PF00271 Helicase conserved C-terminal domain EBS_0984 PF00916 Sulfate permease family EBS_0984 PF01740 STAS domain EBS_0985 PF03313 Serine dehydratase alpha chain EBS_0985 PF03315 Serine dehydratase beta chain EBS_0986 PF00994 Probable molybdopterin binding domain EBS_0986 PF03454 MoeA C-terminal region (domain IV) EBS_0986 PF03453 MoeA N-terminal region (domain I and II) EBS_0987 PF03205 Molybdopterin guanine dinucleotide synthesis protein B EBS_0988 PF12804 MobA-like NTP transferase domain EBS_0989 PF00005 ABC transporter EBS_0989 PF08402 TOBE domain EBS_0990 PF00528 Binding-protein-dependent transport system inner membrane component EBS_0991 PF12849 PBP superfamily domain EBS_0992 PF01527 Transposase EBS_0993 PF13276 HTH-like domain EBS_0993 PF00665 Integrase core domain EBS_0993 PF13333 Integrase core domain EBS_0994 PF16868 NMT1-like family EBS_0997 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBS_0998 PF07690 Major Facilitator Superfamily EBS_1000 PF00873 AcrB/AcrD/AcrF family EBS_1004 PF17876 Cold shock domain EBS_1004 PF00575 S1 RNA binding domain EBS_1004 PF00773 RNB domain EBS_1004 PF08206 Ribonuclease B OB domain EBS_1004 PF08461 Ribonuclease R winged-helix domain EBS_1005 PF08032 RNA 2'-O ribose methyltransferase substrate binding EBS_1005 PF00588 SpoU rRNA Methylase family EBS_1006 PF01250 Ribosomal protein S6 EBS_1007 PF01084 Ribosomal protein S18 EBS_1009 PF03948 Ribosomal protein L9, C-terminal domain EBS_1009 PF01281 Ribosomal protein L9, N-terminal domain EBS_1010 PF00772 DnaB-like helicase N terminal domain EBS_1010 PF03796 DnaB-like helicase C terminal domain EBS_1011 PF00842 Alanine racemase, C-terminal domain EBS_1011 PF01168 Alanine racemase, N-terminal domain EBS_1012 PF18073 Rubredoxin metal binding domain EBS_1013 PF07238 PilZ domain EBS_1014 PF00571 CBS domain EBS_1014 PF01595 Cyclin M transmembrane N-terminal domain EBS_1014 PF03471 Transporter associated domain EBS_1015 PF02954 Bacterial regulatory protein, Fis family EBS_1015 PF00072 Response regulator receiver domain EBS_1015 PF00158 Sigma-54 interaction domain EBS_1016 PF00989 PAS fold EBS_1016 PF00512 His Kinase A (phospho-acceptor) domain EBS_1016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_1018 PF02049 Flagellar hook-basal body complex protein FliE EBS_1019 PF08345 Flagellar M-ring protein C-terminal EBS_1019 PF01514 Secretory protein of YscJ/FliF family EBS_1020 PF01706 FliG C-terminal domain EBS_1020 PF14841 FliG middle domain EBS_1020 PF14842 FliG N-terminal domain EBS_1022 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBS_1022 PF18269 T3SS EscN ATPase C-terminal domain EBS_1027 PF00899 ThiF family EBS_1030 PF00258 Flavodoxin EBS_1030 PF01613 Flavin reductase like domain EBS_1031 PF00085 Thioredoxin EBS_1033 PF02082 Transcriptional regulator EBS_1034 PF01592 NifU-like N terminal domain EBS_1035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_1035 PF00512 His Kinase A (phospho-acceptor) domain EBS_1037 PF05175 Methyltransferase small domain EBS_1039 PF06969 HemN C-terminal domain EBS_1039 PF04055 Radical SAM superfamily EBS_1040 PF00501 AMP-binding enzyme EBS_1040 PF13193 AMP-binding enzyme C-terminal domain EBS_1041 PF09335 SNARE associated Golgi protein EBS_1043 PF01022 Bacterial regulatory protein, arsR family EBS_1045 PF13847 Methyltransferase domain EBS_1048 PF03989 DNA gyrase C-terminal domain, beta-propeller EBS_1048 PF00521 DNA gyrase/topoisomerase IV, subunit A EBS_1049 PF00266 Aminotransferase class-V EBS_1050 PF01842 ACT domain EBS_1050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBS_1050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBS_1051 PF01842 ACT domain EBS_1051 PF01817 Chorismate mutase type II EBS_1051 PF00800 Prephenate dehydratase EBS_1052 PF00155 Aminotransferase class I and II EBS_1053 PF02153 Prephenate dehydrogenase EBS_1054 PF00665 Integrase core domain EBS_1054 PF13333 Integrase core domain EBS_1054 PF13276 HTH-like domain EBS_1055 PF01527 Transposase EBS_1057 PF01063 Amino-transferase class IV EBS_1064 PF01668 SmpB protein EBS_1065 PF00209 Sodium:neurotransmitter symporter family EBS_1066 PF03364 Polyketide cyclase / dehydrase and lipid transport EBS_1067 PF03658 RnfH family Ubiquitin EBS_1068 PF04355 SmpA / OmlA family EBS_1069 PF01475 Ferric uptake regulator family EBS_1071 PF01527 Transposase EBS_1072 PF00665 Integrase core domain EBS_1072 PF13333 Integrase core domain EBS_1072 PF13276 HTH-like domain EBS_1074 PF02463 RecF/RecN/SMC N terminal domain EBS_1075 PF01513 ATP-NAD kinase EBS_1076 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding EBS_1076 PF01628 HrcA protein C terminal domain EBS_1077 PF01025 GrpE EBS_1078 PF00012 Hsp70 protein EBS_1079 PF01556 DnaJ C terminal domain EBS_1079 PF00226 DnaJ domain EBS_1079 PF00684 DnaJ central domain EBS_1080 PF05173 Dihydrodipicolinate reductase, C-terminus EBS_1080 PF01113 Dihydrodipicolinate reductase, N-terminus EBS_1084 PF18073 Rubredoxin metal binding domain EBS_1085 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EBS_1086 PF01747 ATP-sulfurylase EBS_1086 PF14306 PUA-like domain EBS_1090 PF08007 Cupin superfamily protein EBS_1092 PF00206 Lyase EBS_1092 PF08328 Adenylosuccinate lyase C-terminal EBS_1094 PF04356 Protein of unknown function (DUF489) EBS_1096 PF13344 Haloacid dehalogenase-like hydrolase EBS_1096 PF00293 NUDIX domain EBS_1097 PF01027 Inhibitor of apoptosis-promoting Bax1 EBS_1098 PF01527 Transposase EBS_1100 PF05995 Cysteine dioxygenase type I EBS_1101 PF00990 Diguanylate cyclase, GGDEF domain EBS_1101 PF00563 EAL domain EBS_1101 PF08448 PAS fold EBS_1105 PF00072 Response regulator receiver domain EBS_1105 PF00196 Bacterial regulatory proteins, luxR family EBS_1106 PF03167 Uracil DNA glycosylase superfamily EBS_1107 PF08459 UvrC Helix-hairpin-helix N-terminal EBS_1107 PF02151 UvrB/uvrC motif EBS_1107 PF01541 GIY-YIG catalytic domain EBS_1108 PF01066 CDP-alcohol phosphatidyltransferase EBS_1111 PF01527 Transposase EBS_1121 PF01152 Bacterial-like globin EBS_1122 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBS_1123 PF01258 Prokaryotic dksA/traR C4-type zinc finger EBS_1124 PF13419 Haloacid dehalogenase-like hydrolase EBS_1125 PF00155 Aminotransferase class I and II EBS_1126 PF01545 Cation efflux family EBS_1127 PF12392 Collagenase EBS_1127 PF01136 Peptidase family U32 EBS_1131 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBS_1132 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBS_1132 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EBS_1133 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EBS_1133 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EBS_1133 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EBS_1136 PF02151 UvrB/uvrC motif EBS_1136 PF12344 Ultra-violet resistance protein B EBS_1136 PF17757 UvrB interaction domain EBS_1136 PF04851 Type III restriction enzyme, res subunit EBS_1136 PF00271 Helicase conserved C-terminal domain EBS_1137 PF13193 AMP-binding enzyme C-terminal domain EBS_1137 PF00501 AMP-binding enzyme EBS_1139 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBS_1139 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EBS_1140 PF03772 Competence protein EBS_1140 PF13567 Domain of unknown function (DUF4131) EBS_1140 PF00753 Metallo-beta-lactamase superfamily EBS_1141 PF01618 MotA/TolQ/ExbB proton channel family EBS_1142 PF02472 Biopolymer transport protein ExbD/TolR EBS_1143 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EBS_1144 PF03966 Trm112p-like protein EBS_1145 PF02348 Cytidylyltransferase EBS_1146 PF01451 Low molecular weight phosphotyrosine protein phosphatase EBS_1148 PF00849 RNA pseudouridylate synthase EBS_1148 PF01479 S4 domain EBS_1149 PF13419 Haloacid dehalogenase-like hydrolase EBS_1150 PF01343 Peptidase family S49 EBS_1150 PF06965 Na+/H+ antiporter 1 EBS_1151 PF13419 Haloacid dehalogenase-like hydrolase EBS_1152 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EBS_1154 PF03480 Bacterial extracellular solute-binding protein, family 7 EBS_1156 PF03061 Thioesterase superfamily EBS_1157 PF00501 AMP-binding enzyme EBS_1158 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBS_1158 PF00378 Enoyl-CoA hydratase/isomerase EBS_1158 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBS_1159 PF00563 EAL domain EBS_1159 PF00990 Diguanylate cyclase, GGDEF domain EBS_1159 PF00360 Phytochrome region EBS_1159 PF01590 GAF domain EBS_1162 PF01048 Phosphorylase superfamily EBS_1164 PF00933 Glycosyl hydrolase family 3 N terminal domain EBS_1167 PF00528 Binding-protein-dependent transport system inner membrane component EBS_1169 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EBS_1172 PF01527 Transposase EBS_1174 PF05958 tRNA (Uracil-5-)-methyltransferase EBS_1176 PF00291 Pyridoxal-phosphate dependent enzyme EBS_1177 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EBS_1178 PF11967 Recombination protein O N terminal EBS_1178 PF02565 Recombination protein O C terminal EBS_1179 PF01926 50S ribosome-binding GTPase EBS_1179 PF07650 KH domain EBS_1180 PF14622 Ribonuclease-III-like EBS_1180 PF00035 Double-stranded RNA binding motif EBS_1182 PF10502 Signal peptidase, peptidase S26 EBS_1183 PF00679 Elongation factor G C-terminus EBS_1183 PF06421 GTP-binding protein LepA C-terminus EBS_1183 PF00009 Elongation factor Tu GTP binding domain EBS_1185 PF13180 PDZ domain EBS_1189 PF08281 Sigma-70, region 4 EBS_1189 PF04542 Sigma-70 region 2 EBS_1190 PF00890 FAD binding domain EBS_1190 PF02910 Fumarate reductase flavoprotein C-term EBS_1191 PF01026 TatD related DNase EBS_1193 PF09115 DNA polymerase III, delta subunit, C terminal EBS_1194 PF02223 Thymidylate kinase EBS_1195 PF02618 YceG-like family EBS_1196 PF01063 Amino-transferase class IV EBS_1197 PF02801 Beta-ketoacyl synthase, C-terminal domain EBS_1197 PF00109 Beta-ketoacyl synthase, N-terminal domain EBS_1198 PF00550 Phosphopantetheine attachment site EBS_1200 PF00698 Acyl transferase domain EBS_1201 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBS_1201 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBS_1202 PF02504 Fatty acid synthesis protein EBS_1203 PF01783 Ribosomal L32p protein family EBS_1205 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EBS_1206 PF00364 Biotin-requiring enzyme EBS_1206 PF02436 Conserved carboxylase domain EBS_1206 PF00682 HMGL-like EBS_1207 PF04277 Oxaloacetate decarboxylase, gamma chain EBS_1208 PF02545 Maf-like protein EBS_1211 PF00708 Acylphosphatase EBS_1212 PF00330 Aconitase family (aconitate hydratase) EBS_1212 PF11791 Aconitate B N-terminal domain EBS_1212 PF06434 Aconitate hydratase 2 N-terminus EBS_1213 PF03466 LysR substrate binding domain EBS_1213 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBS_1215 PF01053 Cys/Met metabolism PLP-dependent enzyme EBS_1216 PF00156 Phosphoribosyl transferase domain EBS_1217 PF02674 Colicin V production protein EBS_1219 PF13333 Integrase core domain EBS_1219 PF13276 HTH-like domain EBS_1219 PF00665 Integrase core domain EBS_1220 PF01527 Transposase EBS_1221 PF02875 Mur ligase family, glutamate ligase domain EBS_1221 PF08245 Mur ligase middle domain EBS_1222 PF17848 Acetyl-coA carboxylase zinc finger domain EBS_1222 PF01039 Carboxyl transferase domain EBS_1223 PF00290 Tryptophan synthase alpha chain EBS_1224 PF00291 Pyridoxal-phosphate dependent enzyme EBS_1225 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EBS_1226 PF01416 tRNA pseudouridine synthase EBS_1228 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBS_1228 PF02774 Semialdehyde dehydrogenase, dimerisation domain EBS_1229 PF00180 Isocitrate/isopropylmalate dehydrogenase EBS_1230 PF00694 Aconitase C-terminal domain EBS_1231 PF00330 Aconitase family (aconitate hydratase) EBS_1232 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBS_1233 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBS_1233 PF00672 HAMP domain EBS_1236 PF12832 MFS_1 like family EBS_1237 PF01264 Chorismate synthase EBS_1240 PF00990 Diguanylate cyclase, GGDEF domain EBS_1240 PF08448 PAS fold EBS_1242 PF01479 S4 domain EBS_1242 PF00849 RNA pseudouridylate synthase EBS_1243 PF04079 Segregation and condensation complex subunit ScpB EBS_1244 PF02616 Segregation and condensation protein ScpA EBS_1245 PF00579 tRNA synthetases class I (W and Y) EBS_1246 PF02163 Peptidase family M50 EBS_1247 PF01300 Telomere recombination EBS_1248 PF02811 PHP domain EBS_1253 PF04279 Intracellular septation protein A EBS_1254 PF03795 YCII-related domain EBS_1255 PF05698 Bacterial trigger factor protein (TF) C-terminus EBS_1258 PF04545 Sigma-70, region 4 EBS_1258 PF04539 Sigma-70 region 3 EBS_1258 PF00140 Sigma-70 factor, region 1.2 EBS_1258 PF04542 Sigma-70 region 2 EBS_1259 PF01476 LysM domain EBS_1259 PF01551 Peptidase family M23 EBS_1260 PF09335 SNARE associated Golgi protein EBS_1262 PF01975 Survival protein SurE EBS_1264 PF03972 MmgE/PrpD family EBS_1265 PF00285 Citrate synthase, C-terminal domain EBS_1268 PF13193 AMP-binding enzyme C-terminal domain EBS_1268 PF00501 AMP-binding enzyme EBS_1268 PF16177 Acetyl-coenzyme A synthetase N-terminus EBS_1270 PF13085 2Fe-2S iron-sulfur cluster binding domain EBS_1271 PF02910 Fumarate reductase flavoprotein C-term EBS_1271 PF00890 FAD binding domain EBS_1272 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EBS_1273 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EBS_1274 PF04751 Protein of unknown function (DUF615) EBS_1275 PF17768 RecJ OB domain EBS_1275 PF02272 DHHA1 domain EBS_1275 PF01368 DHH family EBS_1277 PF02673 Bacitracin resistance protein BacA EBS_1280 PF13466 STAS domain EBS_1281 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBS_1281 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBS_1283 PF00717 Peptidase S24-like EBS_1283 PF01726 LexA DNA binding domain EBS_1285 PF08003 Protein of unknown function (DUF1698) EBS_1286 PF13649 Methyltransferase domain EBS_1290 PF00589 Phage integrase family EBS_1290 PF02899 Phage integrase, N-terminal SAM-like domain EBS_1291 PF01527 Transposase EBS_1293 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EBS_1293 PF06827 Zinc finger found in FPG and IleRS EBS_1293 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EBS_1294 PF13411 MerR HTH family regulatory protein EBS_1295 PF00216 Bacterial DNA-binding protein EBS_1296 PF03483 B3/4 domain EBS_1296 PF03484 tRNA synthetase B5 domain EBS_1296 PF01588 Putative tRNA binding domain EBS_1296 PF03147 Ferredoxin-fold anticodon binding domain EBS_1296 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EBS_1297 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EBS_1297 PF01409 tRNA synthetases class II core domain (F) EBS_1298 PF00453 Ribosomal protein L20 EBS_1299 PF01632 Ribosomal protein L35 EBS_1300 PF00707 Translation initiation factor IF-3, C-terminal domain EBS_1300 PF05198 Translation initiation factor IF-3, N-terminal domain EBS_1301 PF02824 TGS domain EBS_1301 PF03129 Anticodon binding domain EBS_1301 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBS_1301 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBS_1302 PF00202 Aminotransferase class-III EBS_1307 PF00665 Integrase core domain EBS_1307 PF13333 Integrase core domain EBS_1307 PF13276 HTH-like domain EBS_1311 PF01979 Amidohydrolase family EBS_1315 PF13419 Haloacid dehalogenase-like hydrolase EBS_1317 PF00106 short chain dehydrogenase EBS_1318 PF00535 Glycosyl transferase family 2 EBS_1319 PF02321 Outer membrane efflux protein EBS_1320 PF01476 LysM domain EBS_1320 PF08525 Opacity-associated protein A N-terminal motif EBS_1320 PF01551 Peptidase family M23 EBS_1321 PF00005 ABC transporter EBS_1321 PF00664 ABC transporter transmembrane region EBS_1322 PF00561 alpha/beta hydrolase fold EBS_1328 PF02810 SEC-C motif EBS_1334 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EBS_1335 PF04977 Septum formation initiator EBS_1336 PF03952 Enolase, N-terminal domain EBS_1336 PF00113 Enolase, C-terminal TIM barrel domain EBS_1337 PF00793 DAHP synthetase I family EBS_1338 PF06418 CTP synthase N-terminus EBS_1338 PF00117 Glutamine amidotransferase class-I EBS_1340 PF00027 Cyclic nucleotide-binding domain EBS_1340 PF00325 Bacterial regulatory proteins, crp family EBS_1341 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBS_1344 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EBS_1344 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EBS_1346 PF12801 4Fe-4S binding domain EBS_1346 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EBS_1346 PF13746 4Fe-4S dicluster domain EBS_1348 PF00929 Exonuclease EBS_1349 PF00075 RNase H EBS_1350 PF01209 ubiE/COQ5 methyltransferase family EBS_1351 PF01464 Transglycosylase SLT domain EBS_1353 PF00005 ABC transporter EBS_1353 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EBS_1355 PF00528 Binding-protein-dependent transport system inner membrane component EBS_1356 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EBS_1361 PF01527 Transposase EBS_1363 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EBS_1364 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EBS_1365 PF03480 Bacterial extracellular solute-binding protein, family 7 EBS_1366 PF00158 Sigma-54 interaction domain EBS_1366 PF00072 Response regulator receiver domain EBS_1366 PF02954 Bacterial regulatory protein, Fis family EBS_1367 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_1367 PF02743 Cache domain EBS_1367 PF00512 His Kinase A (phospho-acceptor) domain EBS_1368 PF02769 AIR synthase related protein, C-terminal domain EBS_1368 PF00586 AIR synthase related protein, N-terminal domain EBS_1371 PF00364 Biotin-requiring enzyme EBS_1371 PF02436 Conserved carboxylase domain EBS_1371 PF00682 HMGL-like EBS_1372 PF02785 Biotin carboxylase C-terminal domain EBS_1372 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBS_1372 PF00289 Biotin carboxylase, N-terminal domain EBS_1373 PF01142 tRNA pseudouridine synthase D (TruD) EBS_1374 PF02542 YgbB family EBS_1375 PF01026 TatD related DNase EBS_1376 PF02233 NAD(P) transhydrogenase beta subunit EBS_1378 PF13344 Haloacid dehalogenase-like hydrolase EBS_1382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_1382 PF08918 PhoQ Sensor EBS_1383 PF00072 Response regulator receiver domain EBS_1383 PF00486 Transcriptional regulatory protein, C terminal EBS_1389 PF00205 Thiamine pyrophosphate enzyme, central domain EBS_1389 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBS_1389 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBS_1390 PF05698 Bacterial trigger factor protein (TF) C-terminus EBS_1391 PF00216 Bacterial DNA-binding protein EBS_1392 PF00004 ATPase family associated with various cellular activities (AAA) EBS_1392 PF02190 ATP-dependent protease La (LON) substrate-binding domain EBS_1392 PF05362 Lon protease (S16) C-terminal proteolytic domain EBS_1393 PF10431 C-terminal, D2-small domain, of ClpB protein EBS_1393 PF07724 AAA domain (Cdc48 subfamily) EBS_1393 PF06689 ClpX C4-type zinc finger EBS_1394 PF00574 Clp protease EBS_1395 PF05697 Bacterial trigger factor protein (TF) EBS_1395 PF05698 Bacterial trigger factor protein (TF) C-terminus EBS_1395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBS_1397 PF00216 Bacterial DNA-binding protein EBS_1398 PF00575 S1 RNA binding domain EBS_1399 PF02224 Cytidylate kinase EBS_1400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBS_1401 PF00753 Metallo-beta-lactamase superfamily EBS_1402 PF14437 MafB19-like deaminase EBS_1403 PF00117 Glutamine amidotransferase class-I EBS_1403 PF00958 GMP synthase C terminal domain EBS_1403 PF02540 NAD synthase EBS_1404 PF00571 CBS domain EBS_1404 PF00478 IMP dehydrogenase / GMP reductase domain EBS_1405 PF05191 Adenylate kinase, active site lid EBS_1406 PF05191 Adenylate kinase, active site lid EBS_1408 PF00463 Isocitrate lyase family EBS_1409 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBS_1409 PF03466 LysR substrate binding domain EBS_1410 PF01274 Malate synthase EBS_1411 PF01527 Transposase EBS_1414 PF03707 Bacterial signalling protein N terminal repeat EBS_1414 PF00990 Diguanylate cyclase, GGDEF domain EBS_1414 PF00563 EAL domain EBS_1415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_1415 PF00183 Hsp90 protein EBS_1418 PF02599 Global regulator protein family EBS_1419 PF01842 ACT domain EBS_1419 PF13840 ACT domain EBS_1419 PF00696 Amino acid kinase family EBS_1420 PF01411 tRNA synthetases class II (A) EBS_1420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBS_1420 PF02272 DHHA1 domain EBS_1422 PF01527 Transposase EBS_1423 PF13333 Integrase core domain EBS_1423 PF13276 HTH-like domain EBS_1423 PF00665 Integrase core domain EBS_1425 PF06463 Molybdenum Cofactor Synthesis C EBS_1425 PF04055 Radical SAM superfamily EBS_1426 PF00578 AhpC/TSA family EBS_1429 PF00773 RNB domain EBS_1433 PF00924 Mechanosensitive ion channel EBS_1434 PF02569 Pantoate-beta-alanine ligase EBS_1435 PF02548 Ketopantoate hydroxymethyltransferase EBS_1436 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EBS_1437 PF01743 Poly A polymerase head domain EBS_1437 PF12627 Probable RNA and SrmB- binding site of polymerase A EBS_1437 PF12626 Polymerase A arginine-rich C-terminus EBS_1441 PF01050 Mannose-6-phosphate isomerase EBS_1441 PF00483 Nucleotidyl transferase EBS_1442 PF16363 GDP-mannose 4,6 dehydratase EBS_1443 PF04403 Paraquat-inducible protein A EBS_1444 PF01171 PP-loop family EBS_1444 PF09179 TilS substrate binding domain EBS_1444 PF11734 TilS substrate C-terminal domain EBS_1445 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EBS_1446 PF00152 tRNA synthetases class II (D, K and N) EBS_1446 PF01336 OB-fold nucleic acid binding domain EBS_1447 PF03462 PCRF domain EBS_1447 PF00472 RF-1 domain EBS_1450 PF13361 UvrD-like helicase C-terminal domain EBS_1450 PF00580 UvrD/REP helicase N-terminal domain EBS_1450 PF12705 PD-(D/E)XK nuclease superfamily EBS_1451 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EBS_1451 PF01243 Pyridoxamine 5'-phosphate oxidase EBS_1458 PF02631 RecX family EBS_1459 PF00154 recA bacterial DNA recombination protein EBS_1461 PF02464 Competence-damaged protein EBS_1463 PF01624 MutS domain I EBS_1463 PF00488 MutS domain V EBS_1463 PF05190 MutS family domain IV EBS_1463 PF05192 MutS domain III EBS_1463 PF05188 MutS domain II EBS_1464 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBS_1464 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBS_1464 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBS_1464 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBS_1466 PF03618 Kinase/pyrophosphorylase EBS_1467 PF01565 FAD binding domain EBS_1467 PF02913 FAD linked oxidases, C-terminal domain EBS_1468 PF01565 FAD binding domain EBS_1469 PF01565 FAD binding domain EBS_1469 PF02913 FAD linked oxidases, C-terminal domain EBS_1470 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBS_1470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBS_1471 PF00072 Response regulator receiver domain EBS_1471 PF00196 Bacterial regulatory proteins, luxR family EBS_1472 PF00989 PAS fold EBS_1472 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_1472 PF00512 His Kinase A (phospho-acceptor) domain EBS_1475 PF03739 Lipopolysaccharide export system permease LptF/LptG EBS_1477 PF00883 Cytosol aminopeptidase family, catalytic domain EBS_1477 PF02789 Cytosol aminopeptidase family, N-terminal domain EBS_1478 PF04364 DNA polymerase III chi subunit, HolC EBS_1479 PF01569 PAP2 superfamily EBS_1480 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase EBS_1483 PF00535 Glycosyl transferase family 2 EBS_1484 PF00013 KH domain EBS_1484 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EBS_1484 PF01138 3' exoribonuclease family, domain 1 EBS_1484 PF03725 3' exoribonuclease family, domain 2 EBS_1484 PF00575 S1 RNA binding domain EBS_1485 PF00312 Ribosomal protein S15 EBS_1486 PF09157 Pseudouridine synthase II TruB, C-terminal EBS_1486 PF16198 tRNA pseudouridylate synthase B C-terminal domain EBS_1486 PF01509 TruB family pseudouridylate synthase (N terminal domain) EBS_1487 PF02033 Ribosome-binding factor A EBS_1488 PF04760 Translation initiation factor IF-2, N-terminal region EBS_1488 PF08364 Bacterial translation initiation factor IF-2 associated region EBS_1488 PF11987 Translation-initiation factor 2 EBS_1488 PF03144 Elongation factor Tu domain 2 EBS_1488 PF00009 Elongation factor Tu GTP binding domain EBS_1489 PF13184 NusA-like KH domain EBS_1489 PF08529 NusA N-terminal domain EBS_1490 PF02576 RimP N-terminal domain EBS_1490 PF17384 RimP C-terminal SH3 domain EBS_1491 PF00361 Proton-conducting membrane transporter EBS_1492 PF00361 Proton-conducting membrane transporter EBS_1492 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus EBS_1493 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBS_1493 PF00361 Proton-conducting membrane transporter EBS_1494 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EBS_1495 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EBS_1496 PF12838 4Fe-4S dicluster domain EBS_1497 PF00146 NADH dehydrogenase EBS_1498 PF00384 Molybdopterin oxidoreductase EBS_1498 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal EBS_1498 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EBS_1499 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EBS_1499 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EBS_1499 PF10531 SLBB domain EBS_1501 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EBS_1502 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EBS_1503 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EBS_1504 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EBS_1505 PF03840 Preprotein translocase SecG subunit EBS_1506 PF00121 Triosephosphate isomerase EBS_1507 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBS_1507 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBS_1507 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBS_1507 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBS_1508 PF00809 Pterin binding enzyme EBS_1509 PF17862 AAA+ lid domain EBS_1509 PF00004 ATPase family associated with various cellular activities (AAA) EBS_1509 PF06480 FtsH Extracellular EBS_1509 PF01434 Peptidase family M41 EBS_1510 PF01728 FtsJ-like methyltransferase EBS_1511 PF01985 CRS1 / YhbY (CRM) domain EBS_1512 PF01272 Transcription elongation factor, GreA/GreB, C-term EBS_1512 PF03449 Transcription elongation factor, N-terminal EBS_1513 PF02142 MGS-like domain EBS_1513 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EBS_1513 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBS_1514 PF00117 Glutamine amidotransferase class-I EBS_1514 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EBS_1515 PF00085 Thioredoxin EBS_1516 PF00085 Thioredoxin EBS_1517 PF01980 tRNA-methyltransferase O EBS_1517 PF18389 TrmO C-terminal domain EBS_1518 PF00563 EAL domain EBS_1518 PF00990 Diguanylate cyclase, GGDEF domain EBS_1518 PF03707 Bacterial signalling protein N terminal repeat EBS_1523 PF00005 ABC transporter EBS_1524 PF00528 Binding-protein-dependent transport system inner membrane component EBS_1525 PF00528 Binding-protein-dependent transport system inner membrane component EBS_1526 PF00497 Bacterial extracellular solute-binding proteins, family 3 EBS_1528 PF00005 ABC transporter EBS_1529 PF02687 FtsX-like permease family EBS_1529 PF12704 MacB-like periplasmic core domain EBS_1531 PF04371 Porphyromonas-type peptidyl-arginine deiminase EBS_1532 PF00795 Carbon-nitrogen hydrolase EBS_1534 PF00355 Rieske [2Fe-2S] domain EBS_1541 PF02403 Seryl-tRNA synthetase N-terminal domain EBS_1541 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBS_1543 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EBS_1544 PF00004 ATPase family associated with various cellular activities (AAA) EBS_1544 PF12002 MgsA AAA+ ATPase C terminal EBS_1544 PF16193 AAA C-terminal domain EBS_1545 PF03548 Outer membrane lipoprotein carrier protein LolA EBS_1546 PF17854 FtsK alpha domain EBS_1546 PF09397 Ftsk gamma domain EBS_1546 PF01580 FtsK/SpoIIIE family EBS_1546 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EBS_1547 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EBS_1547 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EBS_1548 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBS_1551 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EBS_1552 PF04377 Arginine-tRNA-protein transferase, C terminus EBS_1552 PF04376 Arginine-tRNA-protein transferase, N terminus EBS_1553 PF01176 Translation initiation factor 1A / IF-1 EBS_1554 PF07724 AAA domain (Cdc48 subfamily) EBS_1554 PF10431 C-terminal, D2-small domain, of ClpB protein EBS_1554 PF02861 Clp amino terminal domain, pathogenicity island component EBS_1554 PF17871 AAA lid domain EBS_1554 PF00004 ATPase family associated with various cellular activities (AAA) EBS_1555 PF02617 ATP-dependent Clp protease adaptor protein ClpS EBS_1556 PF00313 'Cold-shock' DNA-binding domain EBS_1557 PF00180 Isocitrate/isopropylmalate dehydrogenase EBS_1558 PF00849 RNA pseudouridylate synthase EBS_1559 PF00158 Sigma-54 interaction domain EBS_1559 PF00072 Response regulator receiver domain EBS_1559 PF02954 Bacterial regulatory protein, Fis family EBS_1561 PF00270 DEAD/DEAH box helicase EBS_1561 PF02559 CarD-like/TRCF domain EBS_1561 PF00271 Helicase conserved C-terminal domain EBS_1561 PF03461 TRCF domain EBS_1561 PF17757 UvrB interaction domain EBS_1567 PF08406 CbbQ/NirQ/NorQ C-terminal EBS_1567 PF07728 AAA domain (dynein-related subfamily) EBS_1569 PF00510 Cytochrome c oxidase subunit III EBS_1570 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBS_1571 PF00034 Cytochrome c EBS_1572 PF00027 Cyclic nucleotide-binding domain EBS_1572 PF13545 Crp-like helix-turn-helix domain EBS_1575 PF06463 Molybdenum Cofactor Synthesis C EBS_1575 PF04055 Radical SAM superfamily EBS_1576 PF17805 AsnC-like ligand binding domain EBS_1577 PF17805 AsnC-like ligand binding domain EBS_1578 PF17805 AsnC-like ligand binding domain EBS_1580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBS_1580 PF14824 Sirohaem biosynthesis protein central EBS_1580 PF10414 Sirohaem synthase dimerisation region EBS_1586 PF05275 Copper resistance protein B precursor (CopB) EBS_1587 PF07732 Multicopper oxidase EBS_1587 PF07731 Multicopper oxidase EBS_1587 PF00394 Multicopper oxidase EBS_1589 PF12826 Helix-hairpin-helix motif EBS_1589 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EBS_1589 PF03120 NAD-dependent DNA ligase OB-fold domain EBS_1589 PF00533 BRCA1 C Terminus (BRCT) domain EBS_1589 PF01653 NAD-dependent DNA ligase adenylation domain EBS_1590 PF04354 ZipA, C-terminal FtsZ-binding domain EBS_1591 PF06470 SMC proteins Flexible Hinge Domain EBS_1591 PF02463 RecF/RecN/SMC N terminal domain EBS_1592 PF14489 QueF-like protein EBS_1593 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBS_1594 PF01370 NAD dependent epimerase/dehydratase family EBS_1598 PF03447 Homoserine dehydrogenase, NAD binding domain EBS_1598 PF01842 ACT domain EBS_1598 PF00742 Homoserine dehydrogenase EBS_1599 PF00155 Aminotransferase class I and II EBS_1600 PF04430 Protein of unknown function (DUF498/DUF598) EBS_1601 PF00497 Bacterial extracellular solute-binding proteins, family 3 EBS_1601 PF01464 Transglycosylase SLT domain EBS_1602 PF00342 Phosphoglucose isomerase EBS_1603 PF00311 Phosphoenolpyruvate carboxylase EBS_1604 PF14579 Helix-hairpin-helix motif EBS_1604 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBS_1604 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBS_1604 PF02811 PHP domain EBS_1604 PF01336 OB-fold nucleic acid binding domain EBS_1610 PF00691 OmpA family EBS_1610 PF01389 OmpA-like transmembrane domain EBS_1611 PF01351 Ribonuclease HII EBS_1612 PF03781 Sulfatase-modifying factor enzyme 1 EBS_1613 PF01553 Acyltransferase EBS_1615 PF01066 CDP-alcohol phosphatidyltransferase EBS_1616 PF13180 PDZ domain EBS_1616 PF02163 Peptidase family M50 EBS_1618 PF02649 Type I GTP cyclohydrolase folE2 EBS_1620 PF04608 Phosphatidylglycerophosphatase A EBS_1621 PF00586 AIR synthase related protein, N-terminal domain EBS_1621 PF02769 AIR synthase related protein, C-terminal domain EBS_1622 PF01029 NusB family EBS_1623 PF00885 6,7-dimethyl-8-ribityllumazine synthase EBS_1624 PF00925 GTP cyclohydrolase II EBS_1624 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EBS_1626 PF05987 Bacterial protein of unknown function (DUF898) EBS_1634 PF01435 Peptidase family M48 EBS_1642 PF00581 Rhodanese-like domain EBS_1644 PF00483 Nucleotidyl transferase EBS_1645 PF04715 Anthranilate synthase component I, N terminal region EBS_1645 PF00425 chorismate binding enzyme EBS_1646 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) EBS_1647 PF00463 Isocitrate lyase family EBS_1648 PF03737 Aldolase/RraA EBS_1649 PF01274 Malate synthase EBS_1650 PF13276 HTH-like domain EBS_1650 PF00665 Integrase core domain EBS_1650 PF13333 Integrase core domain EBS_1651 PF01527 Transposase EBS_1655 PF06508 Queuosine biosynthesis protein QueC EBS_1656 PF04055 Radical SAM superfamily EBS_1658 PF00691 OmpA family EBS_1659 PF04052 TolB amino-terminal domain EBS_1659 PF07676 WD40-like Beta Propeller Repeat EBS_1661 PF02472 Biopolymer transport protein ExbD/TolR EBS_1662 PF01618 MotA/TolQ/ExbB proton channel family EBS_1663 PF03061 Thioesterase superfamily EBS_1664 PF17864 RuvB AAA lid domain EBS_1664 PF05496 Holliday junction DNA helicase RuvB P-loop domain EBS_1664 PF05491 RuvB C-terminal winged helix domain EBS_1665 PF01330 RuvA N terminal domain EBS_1665 PF07499 RuvA, C-terminal domain EBS_1666 PF02075 Crossover junction endodeoxyribonuclease RuvC EBS_1667 PF01709 Transcriptional regulator EBS_1671 PF08448 PAS fold EBS_1671 PF00990 Diguanylate cyclase, GGDEF domain EBS_1671 PF00563 EAL domain EBS_1672 PF02938 GAD domain EBS_1672 PF00152 tRNA synthetases class II (D, K and N) EBS_1672 PF01336 OB-fold nucleic acid binding domain EBS_1675 PF13677 Membrane MotB of proton-channel complex MotA/MotB EBS_1675 PF00691 OmpA family EBS_1676 PF01618 MotA/TolQ/ExbB proton channel family EBS_1678 PF04262 Glutamate-cysteine ligase EBS_1679 PF11818 C-terminal domain of tail specific protease (DUF3340) EBS_1679 PF00595 PDZ domain EBS_1679 PF03572 Peptidase family S41 EBS_1679 PF17804 Tail specific protease N-terminal domain EBS_1682 PF03819 MazG nucleotide pyrophosphohydrolase domain EBS_1683 PF01966 HD domain EBS_1683 PF13286 Phosphohydrolase-associated domain EBS_1685 PF00873 AcrB/AcrD/AcrF family EBS_1690 PF00005 ABC transporter EBS_1691 PF12399 Branched-chain amino acid ATP-binding cassette transporter EBS_1691 PF00005 ABC transporter EBS_1693 PF02653 Branched-chain amino acid transport system / permease component EBS_1695 PF00072 Response regulator receiver domain EBS_1695 PF00196 Bacterial regulatory proteins, luxR family EBS_1697 PF00920 Dehydratase family EBS_1698 PF08448 PAS fold EBS_1698 PF00990 Diguanylate cyclase, GGDEF domain EBS_1698 PF00563 EAL domain EBS_1701 PF16925 Tetracyclin repressor-like, C-terminal domain EBS_1701 PF00440 Bacterial regulatory proteins, tetR family EBS_1703 PF01546 Peptidase family M20/M25/M40 EBS_1703 PF07687 Peptidase dimerisation domain EBS_1705 PF01145 SPFH domain / Band 7 family EBS_1705 PF16200 C-terminal region of band_7 EBS_1706 PF00696 Amino acid kinase family EBS_1706 PF00583 Acetyltransferase (GNAT) family EBS_1708 PF00202 Aminotransferase class-III EBS_1710 PF00108 Thiolase, N-terminal domain EBS_1710 PF02803 Thiolase, C-terminal domain EBS_1711 PF13193 AMP-binding enzyme C-terminal domain EBS_1711 PF00501 AMP-binding enzyme EBS_1713 PF05552 Conserved TM helix EBS_1713 PF00924 Mechanosensitive ion channel EBS_1716 PF01584 CheW-like domain EBS_1717 PF13614 AAA domain EBS_1718 PF00691 OmpA family EBS_1718 PF13677 Membrane MotB of proton-channel complex MotA/MotB EBS_1719 PF01618 MotA/TolQ/ExbB proton channel family EBS_1720 PF01339 CheB methylesterase EBS_1720 PF00072 Response regulator receiver domain EBS_1721 PF01584 CheW-like domain EBS_1721 PF02895 Signal transducing histidine kinase, homodimeric domain EBS_1721 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_1721 PF01627 Hpt domain EBS_1721 PF07194 P2 response regulator binding domain EBS_1722 PF04344 Chemotaxis phosphatase, CheZ EBS_1723 PF00072 Response regulator receiver domain EBS_1724 PF04539 Sigma-70 region 3 EBS_1724 PF04545 Sigma-70, region 4 EBS_1724 PF04542 Sigma-70 region 2 EBS_1725 PF10609 NUBPL iron-transfer P-loop NTPase EBS_1726 PF00448 SRP54-type protein, GTPase domain EBS_1727 PF00771 FHIPEP family EBS_1728 PF01312 FlhB HrpN YscU SpaS Family EBS_1729 PF01311 Bacterial export proteins, family 1 EBS_1730 PF01313 Bacterial export proteins, family 3 EBS_1731 PF00813 FliP family EBS_1732 PF04347 Flagellar biosynthesis protein, FliO EBS_1733 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EBS_1734 PF02154 Flagellar motor switch protein FliM EBS_1734 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EBS_1736 PF00990 Diguanylate cyclase, GGDEF domain EBS_1736 PF03707 Bacterial signalling protein N terminal repeat EBS_1736 PF00563 EAL domain EBS_1737 PF01734 Patatin-like phospholipase EBS_1738 PF11700 Vacuole effluxer Atg22 like EBS_1739 PF01061 ABC-2 type transporter EBS_1740 PF00005 ABC transporter EBS_1744 PF00583 Acetyltransferase (GNAT) family EBS_1745 PF03167 Uracil DNA glycosylase superfamily EBS_1746 PF00682 HMGL-like EBS_1746 PF08502 LeuA allosteric (dimerisation) domain EBS_1747 PF01066 CDP-alcohol phosphatidyltransferase EBS_1748 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EBS_1748 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EBS_1749 PF10369 Small subunit of acetolactate synthase EBS_1750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBS_1750 PF00205 Thiamine pyrophosphate enzyme, central domain EBS_1750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBS_1752 PF00919 Uncharacterized protein family UPF0004 EBS_1752 PF01938 TRAM domain EBS_1752 PF04055 Radical SAM superfamily EBS_1753 PF02646 RmuC family EBS_1754 PF00109 Beta-ketoacyl synthase, N-terminal domain EBS_1754 PF08659 KR domain EBS_1754 PF02801 Beta-ketoacyl synthase, C-terminal domain EBS_1754 PF16197 Ketoacyl-synthetase C-terminal extension EBS_1754 PF00107 Zinc-binding dehydrogenase EBS_1754 PF08240 Alcohol dehydrogenase GroES-like domain EBS_1754 PF00698 Acyl transferase domain EBS_1754 PF00550 Phosphopantetheine attachment site EBS_1754 PF14765 Polyketide synthase dehydratase EBS_1756 PF05860 haemagglutination activity domain EBS_1758 PF01207 Dihydrouridine synthase (Dus) EBS_1759 PF00011 Hsp20/alpha crystallin family EBS_1763 PF03350 Uncharacterized protein family, UPF0114 EBS_1764 PF00919 Uncharacterized protein family UPF0004 EBS_1764 PF04055 Radical SAM superfamily EBS_1764 PF18693 TRAM domain EBS_1767 PF01627 Hpt domain EBS_1767 PF00512 His Kinase A (phospho-acceptor) domain EBS_1767 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_1767 PF00672 HAMP domain EBS_1767 PF00072 Response regulator receiver domain EBS_1767 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBS_1769 PF03372 Endonuclease/Exonuclease/phosphatase family EBS_1772 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EBS_1772 PF07685 CobB/CobQ-like glutamine amidotransferase domain EBS_1774 PF13247 4Fe-4S dicluster domain EBS_1776 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBS_1776 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EBS_1779 PF04358 DsrC like protein EBS_1781 PF02635 DsrE/DsrF-like family EBS_1782 PF02635 DsrE/DsrF-like family EBS_1783 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EBS_1783 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EBS_1784 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EBS_1784 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EBS_1793 PF02401 LytB protein EBS_1796 PF13333 Integrase core domain EBS_1796 PF00665 Integrase core domain EBS_1796 PF13276 HTH-like domain EBS_1797 PF01527 Transposase EBS_1800 PF01266 FAD dependent oxidoreductase EBS_1802 PF01979 Amidohydrolase family EBS_1803 PF00753 Metallo-beta-lactamase superfamily EBS_1803 PF16123 Hydroxyacylglutathione hydrolase C-terminus EBS_1804 PF01502 Phosphoribosyl-AMP cyclohydrolase EBS_1807 PF01722 BolA-like protein EBS_1808 PF03144 Elongation factor Tu domain 2 EBS_1808 PF00009 Elongation factor Tu GTP binding domain EBS_1808 PF16658 Class II release factor RF3, C-terminal domain EBS_1811 PF07549 SecD/SecF GG Motif EBS_1811 PF02355 Protein export membrane protein EBS_1812 PF07549 SecD/SecF GG Motif EBS_1812 PF13721 SecD export protein N-terminal TM region EBS_1812 PF02355 Protein export membrane protein EBS_1813 PF02699 Preprotein translocase subunit EBS_1814 PF01702 Queuine tRNA-ribosyltransferase EBS_1815 PF02547 Queuosine biosynthesis protein EBS_1818 PF00218 Indole-3-glycerol phosphate synthase EBS_1819 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EBS_1820 PF02321 Outer membrane efflux protein EBS_1821 PF01794 Ferric reductase like transmembrane component EBS_1822 PF00174 Oxidoreductase molybdopterin binding domain EBS_1823 PF04102 SlyX EBS_1824 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EBS_1824 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EBS_1824 PF02769 AIR synthase related protein, C-terminal domain EBS_1825 PF00672 HAMP domain EBS_1825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBS_1825 PF12729 Four helix bundle sensory module for signal transduction EBS_1826 PF00753 Metallo-beta-lactamase superfamily EBS_1827 PF06804 NlpB/DapX lipoprotein EBS_1828 PF00701 Dihydrodipicolinate synthetase family EBS_1830 PF04551 GcpE protein EBS_1831 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBS_1835 PF00892 EamA-like transporter family EBS_1836 PF13193 AMP-binding enzyme C-terminal domain EBS_1836 PF16177 Acetyl-coenzyme A synthetase N-terminus EBS_1836 PF00501 AMP-binding enzyme EBS_1844 PF00929 Exonuclease EBS_1844 PF08411 Exonuclease C-terminal EBS_1845 PF01245 Ribosomal protein L19 EBS_1846 PF01746 tRNA (Guanine-1)-methyltransferase EBS_1847 PF05239 PRC-barrel domain EBS_1847 PF01782 RimM N-terminal domain EBS_1848 PF00886 Ribosomal protein S16 EBS_1850 PF00691 OmpA family EBS_1850 PF13677 Membrane MotB of proton-channel complex MotA/MotB EBS_1851 PF00448 SRP54-type protein, GTPase domain EBS_1851 PF02881 SRP54-type protein, helical bundle domain EBS_1851 PF02978 Signal peptide binding domain EBS_1852 PF01578 Cytochrome C assembly protein EBS_1854 PF02561 Flagellar protein FliS EBS_1855 PF07195 Flagellar hook-associated protein 2 C-terminus EBS_1855 PF07196 Flagellin hook IN motif EBS_1855 PF02465 Flagellar hook-associated protein 2 N-terminus EBS_1856 PF03707 Bacterial signalling protein N terminal repeat EBS_1856 PF00563 EAL domain EBS_1856 PF00990 Diguanylate cyclase, GGDEF domain EBS_1858 PF02541 Ppx/GppA phosphatase family EBS_1860 PF00762 Ferrochelatase EBS_1867 PF00764 Arginosuccinate synthase EBS_1870 PF00005 ABC transporter EBS_1870 PF12704 MacB-like periplasmic core domain EBS_1870 PF02687 FtsX-like permease family EBS_1871 PF00005 ABC transporter EBS_1871 PF02687 FtsX-like permease family EBS_1871 PF12704 MacB-like periplasmic core domain EBS_1873 PF00317 Ribonucleotide reductase, all-alpha domain EBS_1873 PF03477 ATP cone domain EBS_1873 PF02867 Ribonucleotide reductase, barrel domain EBS_1876 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBS_1876 PF00672 HAMP domain EBS_1878 PF01259 SAICAR synthetase EBS_1880 PF01636 Phosphotransferase enzyme family EBS_1881 PF01116 Fructose-bisphosphate aldolase class-II EBS_1882 PF02887 Pyruvate kinase, alpha/beta domain EBS_1882 PF00224 Pyruvate kinase, barrel domain EBS_1883 PF00162 Phosphoglycerate kinase EBS_1884 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EBS_1884 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EBS_1885 PF00456 Transketolase, thiamine diphosphate binding domain EBS_1885 PF02780 Transketolase, C-terminal domain EBS_1885 PF02779 Transketolase, pyrimidine binding domain EBS_1889 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EBS_1889 PF05221 S-adenosyl-L-homocysteine hydrolase EBS_1890 PF02219 Methylenetetrahydrofolate reductase EBS_1891 PF04452 RNA methyltransferase EBS_1893 PF02895 Signal transducing histidine kinase, homodimeric domain EBS_1893 PF01584 CheW-like domain EBS_1893 PF07194 P2 response regulator binding domain EBS_1893 PF01627 Hpt domain EBS_1893 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_1894 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EBS_1894 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBS_1895 PF01584 CheW-like domain EBS_1896 PF00072 Response regulator receiver domain EBS_1897 PF00072 Response regulator receiver domain EBS_1900 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EBS_1900 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EBS_1901 PF02424 ApbE family EBS_1902 PF03544 Gram-negative bacterial TonB protein C-terminal EBS_1903 PF02622 Uncharacterized ACR, COG1678 EBS_1904 PF03652 Holliday junction resolvase EBS_1905 PF00156 Phosphoribosyl transferase domain EBS_1906 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBS_1906 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBS_1907 PF01979 Amidohydrolase family EBS_1910 PF03449 Transcription elongation factor, N-terminal EBS_1910 PF01272 Transcription elongation factor, GreA/GreB, C-term EBS_1911 PF04304 Protein of unknown function (DUF454) EBS_1912 PF01435 Peptidase family M48 EBS_1914 PF01809 Putative membrane protein insertion efficiency factor EBS_1916 PF00990 Diguanylate cyclase, GGDEF domain EBS_1918 PF01323 DSBA-like thioredoxin domain EBS_1919 PF00034 Cytochrome c EBS_1920 PF00034 Cytochrome c EBS_1922 PF01479 S4 domain EBS_1922 PF00849 RNA pseudouridylate synthase EBS_1924 PF02754 Cysteine-rich domain EBS_1925 PF02589 LUD domain EBS_1925 PF13183 4Fe-4S dicluster domain EBS_1925 PF11870 Domain of unknown function (DUF3390) EBS_1926 PF02589 LUD domain EBS_1929 PF13667 ThiC-associated domain EBS_1929 PF01964 Radical SAM ThiC family EBS_1931 PF00581 Rhodanese-like domain EBS_1932 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EBS_1933 PF03279 Bacterial lipid A biosynthesis acyltransferase EBS_1934 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EBS_1935 PF00664 ABC transporter transmembrane region EBS_1935 PF00005 ABC transporter EBS_1938 PF01757 Acyltransferase family EBS_1947 PF00535 Glycosyl transferase family 2 EBS_1950 PF02350 UDP-N-acetylglucosamine 2-epimerase EBS_1951 PF13439 Glycosyltransferase Family 4 EBS_1951 PF00534 Glycosyl transferases group 1 EBS_1952 PF00884 Sulfatase EBS_1952 PF08019 Phosphoethanolamine transferase EptA/EptB EBS_1953 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase EBS_1955 PF01063 Amino-transferase class IV EBS_1956 PF08335 GlnD PII-uridylyltransferase EBS_1956 PF03710 Glutamate-ammonia ligase adenylyltransferase EBS_1958 PF00118 TCP-1/cpn60 chaperonin family EBS_1959 PF00166 Chaperonin 10 Kd subunit EBS_1962 PF03091 CutA1 divalent ion tolerance protein EBS_1963 PF11412 Disulphide bond corrector protein DsbC EBS_1963 PF02683 Cytochrome C biogenesis protein transmembrane region EBS_1964 PF00578 AhpC/TSA family EBS_1965 PF01220 Dehydroquinase class II EBS_1966 PF00364 Biotin-requiring enzyme EBS_1967 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBS_1967 PF02785 Biotin carboxylase C-terminal domain EBS_1967 PF00289 Biotin carboxylase, N-terminal domain EBS_1971 PF02954 Bacterial regulatory protein, Fis family EBS_1972 PF01808 AICARFT/IMPCHase bienzyme EBS_1972 PF02142 MGS-like domain EBS_1975 PF00501 AMP-binding enzyme EBS_1977 PF00106 short chain dehydrogenase EBS_1979 PF01494 FAD binding domain EBS_1981 PF00563 EAL domain EBS_1981 PF00990 Diguanylate cyclase, GGDEF domain EBS_1981 PF03707 Bacterial signalling protein N terminal repeat EBS_1982 PF16921 Tex protein YqgF-like domain EBS_1982 PF09371 Tex-like protein N-terminal domain EBS_1982 PF17674 HHH domain EBS_1982 PF00575 S1 RNA binding domain EBS_1984 PF00563 EAL domain EBS_1984 PF13188 PAS domain EBS_1984 PF00990 Diguanylate cyclase, GGDEF domain EBS_1984 PF03707 Bacterial signalling protein N terminal repeat EBS_1985 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EBS_1985 PF00132 Bacterial transferase hexapeptide (six repeats) EBS_1986 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EBS_1986 PF02843 Phosphoribosylglycinamide synthetase, C domain EBS_1986 PF02844 Phosphoribosylglycinamide synthetase, N domain EBS_1988 PF01625 Peptide methionine sulfoxide reductase EBS_1989 PF01430 Hsp33 protein EBS_1991 PF03167 Uracil DNA glycosylase superfamily EBS_1992 PF00107 Zinc-binding dehydrogenase EBS_1992 PF00550 Phosphopantetheine attachment site EBS_1992 PF14765 Polyketide synthase dehydratase EBS_1992 PF00109 Beta-ketoacyl synthase, N-terminal domain EBS_1992 PF16197 Ketoacyl-synthetase C-terminal extension EBS_1992 PF08240 Alcohol dehydrogenase GroES-like domain EBS_1992 PF00698 Acyl transferase domain EBS_1992 PF08659 KR domain EBS_1992 PF02801 Beta-ketoacyl synthase, C-terminal domain EBS_1993 PF01171 PP-loop family EBS_1995 PF17200 Single Cache domain 2 EBS_1995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBS_1995 PF00672 HAMP domain EBS_1996 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBS_1996 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBS_1998 PF00484 Carbonic anhydrase EBS_2003 PF00578 AhpC/TSA family EBS_2007 PF00873 AcrB/AcrD/AcrF family EBS_2009 PF03969 AFG1-like ATPase EBS_2010 PF01022 Bacterial regulatory protein, arsR family EBS_2011 PF00072 Response regulator receiver domain EBS_2012 PF00512 His Kinase A (phospho-acceptor) domain EBS_2012 PF01627 Hpt domain EBS_2012 PF00072 Response regulator receiver domain EBS_2012 PF00672 HAMP domain EBS_2012 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBS_2012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_2013 PF00849 RNA pseudouridylate synthase EBS_2013 PF04287 tRNA pseudouridine synthase C EBS_2014 PF06071 Protein of unknown function (DUF933) EBS_2014 PF01926 50S ribosome-binding GTPase EBS_2015 PF13466 STAS domain EBS_2016 PF00672 HAMP domain EBS_2016 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBS_2016 PF17200 Single Cache domain 2 EBS_2017 PF00072 Response regulator receiver domain EBS_2017 PF01339 CheB methylesterase EBS_2018 PF03975 CheD chemotactic sensory transduction EBS_2019 PF01739 CheR methyltransferase, SAM binding domain EBS_2019 PF03705 CheR methyltransferase, all-alpha domain EBS_2022 PF13614 AAA domain EBS_2023 PF01584 CheW-like domain EBS_2025 PF02203 Tar ligand binding domain homologue EBS_2025 PF00672 HAMP domain EBS_2025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBS_2026 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_2026 PF01584 CheW-like domain EBS_2026 PF01627 Hpt domain EBS_2026 PF02895 Signal transducing histidine kinase, homodimeric domain EBS_2027 PF00072 Response regulator receiver domain EBS_2030 PF03309 Type III pantothenate kinase EBS_2031 PF02237 Biotin protein ligase C terminal domain EBS_2031 PF08279 HTH domain EBS_2031 PF03099 Biotin/lipoate A/B protein ligase family EBS_2034 PF00579 tRNA synthetases class I (W and Y) EBS_2035 PF01551 Peptidase family M23 EBS_2035 PF04225 Opacity-associated protein A LysM-like domain EBS_2036 PF03702 Anhydro-N-acetylmuramic acid kinase EBS_2037 PF01521 Iron-sulphur cluster biosynthesis EBS_2040 PF02774 Semialdehyde dehydrogenase, dimerisation domain EBS_2040 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBS_2041 PF00654 Voltage gated chloride channel EBS_2045 PF01521 Iron-sulphur cluster biosynthesis EBS_2047 PF00301 Rubredoxin EBS_2048 PF08543 Phosphomethylpyrimidine kinase EBS_2049 PF02581 Thiamine monophosphate synthase EBS_2050 PF00202 Aminotransferase class-III EBS_2051 PF09335 SNARE associated Golgi protein EBS_2052 PF00300 Histidine phosphatase superfamily (branch 1) EBS_2054 PF00753 Metallo-beta-lactamase superfamily EBS_2055 PF00793 DAHP synthetase I family EBS_2056 PF02824 TGS domain EBS_2056 PF13291 ACT domain EBS_2056 PF04607 Region found in RelA / SpoT proteins EBS_2057 PF01192 RNA polymerase Rpb6 EBS_2058 PF00625 Guanylate kinase EBS_2059 PF03755 YicC-like family, N-terminal region EBS_2059 PF08340 Domain of unknown function (DUF1732) EBS_2060 PF00069 Protein kinase domain EBS_2062 PF03725 3' exoribonuclease family, domain 2 EBS_2062 PF01138 3' exoribonuclease family, domain 1 EBS_2063 PF01725 Ham1 family EBS_2065 PF03641 Possible lysine decarboxylase EBS_2066 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EBS_2066 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBS_2067 PF00580 UvrD/REP helicase N-terminal domain EBS_2067 PF13361 UvrD-like helicase C-terminal domain EBS_2070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EBS_2071 PF13419 Haloacid dehalogenase-like hydrolase EBS_2072 PF00834 Ribulose-phosphate 3 epimerase family EBS_2075 PF05746 DALR anticodon binding domain EBS_2075 PF03485 Arginyl tRNA synthetase N terminal domain EBS_2075 PF00750 tRNA synthetases class I (R) EBS_2076 PF00271 Helicase conserved C-terminal domain EBS_2076 PF18074 Primosomal protein N C-terminal domain EBS_2076 PF17764 3′ DNA-binding domain (3′BD) EBS_2076 PF00270 DEAD/DEAH box helicase EBS_2076 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EBS_2084 PF09278 MerR, DNA binding EBS_2084 PF00376 MerR family regulatory protein EBS_2086 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBS_2086 PF00403 Heavy-metal-associated domain EBS_2086 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBS_2088 PF00909 Ammonium Transporter Family EBS_2089 PF00543 Nitrogen regulatory protein P-II EBS_2093 PF01078 Magnesium chelatase, subunit ChlI EBS_2093 PF13335 Magnesium chelatase, subunit ChlI C-terminal EBS_2097 PF13439 Glycosyltransferase Family 4 EBS_2097 PF00534 Glycosyl transferases group 1 EBS_2098 PF03275 UDP-galactopyranose mutase EBS_2101 PF08323 Starch synthase catalytic domain EBS_2101 PF00534 Glycosyl transferases group 1 EBS_2102 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_2102 PF00989 PAS fold EBS_2102 PF11808 Phosphate regulon sensor protein PhoR EBS_2102 PF00512 His Kinase A (phospho-acceptor) domain EBS_2103 PF00072 Response regulator receiver domain EBS_2103 PF00486 Transcriptional regulatory protein, C terminal EBS_2104 PF01895 PhoU domain EBS_2105 PF00005 ABC transporter EBS_2106 PF00528 Binding-protein-dependent transport system inner membrane component EBS_2107 PF00528 Binding-protein-dependent transport system inner membrane component EBS_2109 PF00005 ABC transporter EBS_2109 PF12848 ABC transporter EBS_2111 PF00472 RF-1 domain EBS_2112 PF01161 Phosphatidylethanolamine-binding protein EBS_2113 PF07995 Glucose / Sorbosone dehydrogenase EBS_2114 PF00118 TCP-1/cpn60 chaperonin family EBS_2115 PF00166 Chaperonin 10 Kd subunit EBS_2120 PF00465 Iron-containing alcohol dehydrogenase EBS_2123 PF05166 YcgL domain EBS_2131 PF00226 DnaJ domain EBS_2131 PF05099 Tellurite resistance protein TerB EBS_2137 PF00216 Bacterial DNA-binding protein EBS_2142 PF01593 Flavin containing amine oxidoreductase EBS_2143 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBS_2143 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBS_2145 PF02754 Cysteine-rich domain EBS_2148 PF00890 FAD binding domain EBS_2149 PF13187 4Fe-4S dicluster domain EBS_2149 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit EBS_2150 PF00158 Sigma-54 interaction domain EBS_2150 PF02954 Bacterial regulatory protein, Fis family EBS_2150 PF00072 Response regulator receiver domain EBS_2151 PF08281 Sigma-70, region 4 EBS_2151 PF04542 Sigma-70 region 2 EBS_2152 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBS_2152 PF17810 Arginine decarboxylase helical bundle domain EBS_2152 PF17944 Arginine decarboxylase C-terminal helical extension EBS_2153 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBS_2153 PF03466 LysR substrate binding domain EBS_2154 PF01717 Cobalamin-independent synthase, Catalytic domain EBS_2154 PF08267 Cobalamin-independent synthase, N-terminal domain EBS_2155 PF12950 TaqI-like C-terminal specificity domain EBS_2155 PF07669 Eco57I restriction-modification methylase EBS_2158 PF17284 Spermidine synthase tetramerisation domain EBS_2160 PF00186 Dihydrofolate reductase EBS_2161 PF00303 Thymidylate synthase EBS_2162 PF01790 Prolipoprotein diacylglyceryl transferase EBS_2164 PF01381 Helix-turn-helix EBS_2165 PF17785 PUA-like domain EBS_2165 PF10672 S-adenosylmethionine-dependent methyltransferase EBS_2166 PF02600 Disulfide bond formation protein DsbB EBS_2167 PF04228 Putative neutral zinc metallopeptidase EBS_2169 PF05872 Bacterial protein of unknown function (DUF853) EBS_2170 PF03190 Protein of unknown function, DUF255 EBS_2171 PF02630 SCO1/SenC EBS_2172 PF04358 DsrC like protein EBS_2174 PF00501 AMP-binding enzyme EBS_2175 PF05690 Thiazole biosynthesis protein ThiG EBS_2175 PF02597 ThiS family EBS_2176 PF05690 Thiazole biosynthesis protein ThiG EBS_2177 PF02390 Putative methyltransferase EBS_2178 PF00005 ABC transporter EBS_2178 PF17912 MalK OB fold domain EBS_2179 PF03649 Uncharacterised protein family (UPF0014) EBS_2181 PF04386 Stringent starvation protein B EBS_2182 PF00043 Glutathione S-transferase, C-terminal domain EBS_2182 PF02798 Glutathione S-transferase, N-terminal domain EBS_2183 PF02167 Cytochrome C1 family EBS_2184 PF00032 Cytochrome b(C-terminal)/b6/petD EBS_2184 PF00033 Cytochrome b/b6/petB EBS_2185 PF00355 Rieske [2Fe-2S] domain EBS_2185 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EBS_2186 PF01784 NIF3 (NGG1p interacting factor 3) EBS_2187 PF17820 PDZ domain EBS_2187 PF13180 PDZ domain EBS_2188 PF00155 Aminotransferase class I and II EBS_2189 PF01292 Prokaryotic cytochrome b561 EBS_2190 PF00374 Nickel-dependent hydrogenase EBS_2191 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EBS_2191 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal EBS_2192 PF01750 Hydrogenase maturation protease EBS_2193 PF01455 HupF/HypC family EBS_2194 PF07449 Hydrogenase-1 expression protein HyaE EBS_2195 PF04809 HupH hydrogenase expression protein, C-terminal conserved region EBS_2196 PF00301 Rubredoxin EBS_2197 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE EBS_2199 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EBS_2200 PF02492 CobW/HypB/UreG, nucleotide-binding domain EBS_2201 PF02954 Bacterial regulatory protein, Fis family EBS_2201 PF00158 Sigma-54 interaction domain EBS_2201 PF00072 Response regulator receiver domain EBS_2202 PF00512 His Kinase A (phospho-acceptor) domain EBS_2202 PF13188 PAS domain EBS_2202 PF00072 Response regulator receiver domain EBS_2202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_2202 PF08448 PAS fold EBS_2203 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EBS_2203 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal EBS_2204 PF00374 Nickel-dependent hydrogenase EBS_2205 PF00708 Acylphosphatase EBS_2205 PF17788 HypF Kae1-like domain EBS_2205 PF01300 Telomere recombination EBS_2205 PF07503 HypF finger EBS_2206 PF01455 HupF/HypC family EBS_2207 PF13580 SIS domain EBS_2208 PF01924 Hydrogenase formation hypA family EBS_2209 PF02769 AIR synthase related protein, C-terminal domain EBS_2209 PF00586 AIR synthase related protein, N-terminal domain EBS_2210 PF13386 Cytochrome C biogenesis protein transmembrane region EBS_2211 PF00815 Histidinol dehydrogenase EBS_2212 PF01634 ATP phosphoribosyltransferase EBS_2213 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBS_2216 PF02470 MlaD protein EBS_2217 PF02405 Permease MlaE EBS_2218 PF00005 ABC transporter EBS_2221 PF01699 Sodium/calcium exchanger protein EBS_2222 PF00571 CBS domain EBS_2222 PF01380 SIS domain EBS_2226 PF12399 Branched-chain amino acid ATP-binding cassette transporter EBS_2226 PF00005 ABC transporter EBS_2227 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EBS_2227 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBS_2228 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EBS_2228 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EBS_2229 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EBS_2230 PF02685 Glucokinase EBS_2231 PF00483 Nucleotidyl transferase EBS_2233 PF02446 4-alpha-glucanotransferase EBS_2234 PF02806 Alpha amylase, C-terminal all-beta domain EBS_2234 PF00128 Alpha amylase, catalytic domain EBS_2234 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBS_2235 PF00534 Glycosyl transferases group 1 EBS_2235 PF08323 Starch synthase catalytic domain EBS_2236 PF00343 Carbohydrate phosphorylase EBS_2237 PF04552 Sigma-54, DNA binding domain EBS_2237 PF00309 Sigma-54 factor, Activator interacting domain (AID) EBS_2237 PF04963 Sigma-54 factor, core binding domain EBS_2238 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EBS_2239 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EBS_2241 PF03668 P-loop ATPase protein family EBS_2243 PF00381 PTS HPr component phosphorylation site EBS_2244 PF05524 PEP-utilising enzyme, N-terminal EBS_2244 PF02896 PEP-utilising enzyme, TIM barrel domain EBS_2244 PF00391 PEP-utilising enzyme, mobile domain EBS_2245 PF00571 CBS domain EBS_2245 PF01769 Divalent cation transporter EBS_2245 PF03448 MgtE intracellular N domain EBS_2246 PF03264 NapC/NirT cytochrome c family, N-terminal region EBS_2247 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) EBS_2248 PF12801 4Fe-4S binding domain EBS_2248 PF12837 4Fe-4S binding domain EBS_2249 PF12838 4Fe-4S dicluster domain EBS_2249 PF12800 4Fe-4S binding domain EBS_2253 PF08264 Anticodon-binding domain of tRNA EBS_2253 PF00133 tRNA synthetases class I (I, L, M and V) EBS_2253 PF13603 Leucyl-tRNA synthetase, Domain 2 EBS_2260 PF00171 Aldehyde dehydrogenase family EBS_2261 PF01467 Cytidylyltransferase-like EBS_2266 PF13276 HTH-like domain EBS_2266 PF00665 Integrase core domain EBS_2266 PF13333 Integrase core domain EBS_2267 PF01527 Transposase EBS_2270 PF01867 CRISPR associated protein Cas1 EBS_2271 PF09827 CRISPR associated protein Cas2 EBS_2273 PF05114 Protein of unknown function (DUF692) EBS_2276 PF02590 Predicted SPOUT methyltransferase EBS_2277 PF02545 Maf-like protein EBS_2278 PF10150 Ribonuclease E/G family EBS_2278 PF00575 S1 RNA binding domain EBS_2280 PF00795 Carbon-nitrogen hydrolase EBS_2281 PF01523 Putative modulator of DNA gyrase EBS_2282 PF01523 Putative modulator of DNA gyrase EBS_2285 PF13419 Haloacid dehalogenase-like hydrolase EBS_2286 PF00459 Inositol monophosphatase family EBS_2288 PF00563 EAL domain EBS_2288 PF00990 Diguanylate cyclase, GGDEF domain EBS_2288 PF03707 Bacterial signalling protein N terminal repeat EBS_2288 PF13188 PAS domain EBS_2293 PF03958 Bacterial type II/III secretion system short domain EBS_2293 PF00263 Bacterial type II and III secretion system protein EBS_2294 PF13401 AAA domain EBS_2294 PF01471 Putative peptidoglycan binding domain EBS_2296 PF00437 Type II/IV secretion system protein EBS_2297 PF00482 Type II secretion system (T2SS), protein F EBS_2302 PF07963 Prokaryotic N-terminal methylation motif EBS_2302 PF14245 Type IV pilin PilA EBS_2304 PF04362 Bacterial Fe(2+) trafficking EBS_2305 PF00633 Helix-hairpin-helix motif EBS_2305 PF14815 NUDIX domain EBS_2305 PF00730 HhH-GPD superfamily base excision DNA repair protein EBS_2307 PF08281 Sigma-70, region 4 EBS_2307 PF04542 Sigma-70 region 2 EBS_2310 PF03707 Bacterial signalling protein N terminal repeat EBS_2310 PF00990 Diguanylate cyclase, GGDEF domain EBS_2310 PF00563 EAL domain EBS_2311 PF00072 Response regulator receiver domain EBS_2312 PF00672 HAMP domain EBS_2312 PF02743 Cache domain EBS_2312 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBS_2313 PF04542 Sigma-70 region 2 EBS_2313 PF08281 Sigma-70, region 4 EBS_2315 PF00294 pfkB family carbohydrate kinase EBS_2315 PF01467 Cytidylyltransferase-like EBS_2317 PF01219 Prokaryotic diacylglycerol kinase EBS_2318 PF02347 Glycine cleavage system P-protein EBS_2319 PF08534 Redoxin EBS_2320 PF02347 Glycine cleavage system P-protein EBS_2321 PF01597 Glycine cleavage H-protein EBS_2322 PF08669 Glycine cleavage T-protein C-terminal barrel domain EBS_2322 PF01571 Aminomethyltransferase folate-binding domain EBS_2323 PF00528 Binding-protein-dependent transport system inner membrane component EBS_2328 PF03030 Inorganic H+ pyrophosphatase EBS_2329 PF00719 Inorganic pyrophosphatase EBS_2331 PF01967 MoaC family EBS_2332 PF01926 50S ribosome-binding GTPase EBS_2333 PF01494 FAD binding domain EBS_2334 PF05195 Aminopeptidase P, N-terminal domain EBS_2334 PF00557 Metallopeptidase family M24 EBS_2335 PF03695 Uncharacterised protein family (UPF0149) EBS_2337 PF05164 Cell division protein ZapA EBS_2338 PF01812 5-formyltetrahydrofolate cyclo-ligase family EBS_2339 PF00585 C-terminal regulatory domain of Threonine dehydratase EBS_2339 PF00291 Pyridoxal-phosphate dependent enzyme EBS_2340 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EBS_2341 PF13609 Gram-negative porin EBS_2342 PF00380 Ribosomal protein S9/S16 EBS_2343 PF00572 Ribosomal protein L13 EBS_2345 PF13183 4Fe-4S dicluster domain EBS_2345 PF02754 Cysteine-rich domain EBS_2346 PF03232 Ubiquinone biosynthesis protein COQ7 EBS_2347 PF13181 Tetratricopeptide repeat EBS_2348 PF01208 Uroporphyrinogen decarboxylase (URO-D) EBS_2350 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EBS_2350 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBS_2351 PF01493 GXGXG motif EBS_2351 PF01645 Conserved region in glutamate synthase EBS_2351 PF00310 Glutamine amidotransferases class-II EBS_2351 PF04898 Glutamate synthase central domain EBS_2353 PF01761 3-dehydroquinate synthase EBS_2354 PF01202 Shikimate kinase EBS_2355 PF11741 AMIN domain EBS_2355 PF03958 Bacterial type II/III secretion system short domain EBS_2355 PF00263 Bacterial type II and III secretion system protein EBS_2355 PF07660 Secretin and TonB N terminus short domain EBS_2360 PF00905 Penicillin binding protein transpeptidase domain EBS_2360 PF17092 Penicillin-binding protein OB-like domain EBS_2360 PF00912 Transglycosylase EBS_2361 PF00285 Citrate synthase, C-terminal domain EBS_2362 PF00056 lactate/malate dehydrogenase, NAD binding domain EBS_2362 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EBS_2363 PF03949 Malic enzyme, NAD binding domain EBS_2363 PF00390 Malic enzyme, N-terminal domain EBS_2364 PF01197 Ribosomal protein L31 EBS_2368 PF06969 HemN C-terminal domain EBS_2368 PF04055 Radical SAM superfamily EBS_2369 PF00580 UvrD/REP helicase N-terminal domain EBS_2369 PF13361 UvrD-like helicase C-terminal domain EBS_2372 PF05231 MASE1 EBS_2372 PF00563 EAL domain EBS_2372 PF13426 PAS domain EBS_2372 PF08448 PAS fold EBS_2372 PF08447 PAS fold EBS_2372 PF00990 Diguanylate cyclase, GGDEF domain EBS_2373 PF00072 Response regulator receiver domain EBS_2373 PF00158 Sigma-54 interaction domain EBS_2374 PF00990 Diguanylate cyclase, GGDEF domain EBS_2374 PF00072 Response regulator receiver domain EBS_2378 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBS_2378 PF00672 HAMP domain EBS_2378 PF01627 Hpt domain EBS_2378 PF00072 Response regulator receiver domain EBS_2378 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBS_2378 PF00512 His Kinase A (phospho-acceptor) domain EBS_2379 PF01380 SIS domain EBS_2380 PF00132 Bacterial transferase hexapeptide (six repeats) EBS_2380 PF12804 MobA-like NTP transferase domain EBS_2380 PF14602 Hexapeptide repeat of succinyl-transferase EBS_2381 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBS_2382 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EBS_2382 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EBS_2383 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBS_2383 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBS_2384 PF00231 ATP synthase EBS_2385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBS_2385 PF00306 ATP synthase alpha/beta chain, C terminal domain EBS_2385 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBS_2386 PF00213 ATP synthase delta (OSCP) subunit EBS_2387 PF00430 ATP synthase B/B' CF(0) EBS_2388 PF00137 ATP synthase subunit C EBS_2389 PF00119 ATP synthase A chain EBS_2391 PF17762 HTH domain found in ParB protein EBS_2391 PF02195 ParB-like nuclease domain EBS_2392 PF13614 AAA domain EBS_2393 PF02527 rRNA small subunit methyltransferase G EBS_2394 PF00043 Glutathione S-transferase, C-terminal domain EBS_2394 PF02798 Glutathione S-transferase, N-terminal domain EBS_2395 PF00690 Cation transporter/ATPase, N-terminus EBS_2395 PF00689 Cation transporting ATPase, C-terminus EBS_2396 PF03883 Peroxide stress protein YaaA EBS_2397 PF13932 GidA associated domain EBS_2397 PF01134 Glucose inhibited division protein A EBS_2399 PF17863 AAA lid domain EBS_2399 PF07726 ATPase family associated with various cellular activities (AAA) EBS_2401 PF11992 Domain of unknown function (DUF3488) EBS_2401 PF01841 Transglutaminase-like superfamily EBS_2401 PF13559 Domain of unknown function (DUF4129) EBS_2402 PF01177 Asp/Glu/Hydantoin racemase EBS_2403 PF10396 GTP-binding protein TrmE N-terminus EBS_2403 PF12631 MnmE helical domain EBS_2403 PF01926 50S ribosome-binding GTPase EBS_2404 PF14849 YidC periplasmic domain EBS_2404 PF02096 60Kd inner membrane protein EBS_2405 PF00825 Ribonuclease P EBS_2406 PF00468 Ribosomal protein L34