locus-tag class description D5085_00020 PF03050 Transposase IS66 family D5085_00030 PF09827 CRISPR associated protein Cas2 D5085_00035 PF00004 ATPase family associated with various cellular activities (AAA) D5085_00035 PF16450 Proteasomal ATPase OB C-terminal domain D5085_00035 PF17758 Proteasomal ATPase OB N-terminal domain D5085_00040 PF00589 Phage integrase family D5085_00060 PF07977 FabA-like domain D5085_00065 PF07977 FabA-like domain D5085_00070 PF14765 Polyketide synthase dehydratase D5085_00070 PF00550 Phosphopantetheine attachment site D5085_00070 PF02801 Beta-ketoacyl synthase, C-terminal domain D5085_00070 PF08659 KR domain D5085_00070 PF16197 Ketoacyl-synthetase C-terminal extension D5085_00070 PF08240 Alcohol dehydrogenase GroES-like domain D5085_00070 PF00698 Acyl transferase domain D5085_00070 PF00109 Beta-ketoacyl synthase, N-terminal domain D5085_00100 PF00698 Acyl transferase domain D5085_00105 PF00109 Beta-ketoacyl synthase, N-terminal domain D5085_00105 PF14765 Polyketide synthase dehydratase D5085_00105 PF16197 Ketoacyl-synthetase C-terminal extension D5085_00105 PF02801 Beta-ketoacyl synthase, C-terminal domain D5085_00105 PF08659 KR domain D5085_00105 PF00550 Phosphopantetheine attachment site D5085_00115 PF03060 Nitronate monooxygenase D5085_00115 PF00698 Acyl transferase domain D5085_00140 PF01734 Patatin-like phospholipase D5085_00140 PF00027 Cyclic nucleotide-binding domain D5085_00145 PF00005 ABC transporter D5085_00145 PF00664 ABC transporter transmembrane region D5085_00155 PF14490 Helix-hairpin-helix containing domain D5085_00155 PF13538 UvrD-like helicase C-terminal domain D5085_00155 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain D5085_00160 PF00270 DEAD/DEAH box helicase D5085_00160 PF00271 Helicase conserved C-terminal domain D5085_00170 PF13673 Acetyltransferase (GNAT) domain D5085_00180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_00180 PF00672 HAMP domain D5085_00180 PF17200 Single Cache domain 2 D5085_00185 PF08000 Bacterial PH domain D5085_00195 PF03459 TOBE domain D5085_00195 PF00005 ABC transporter D5085_00200 PF00528 Binding-protein-dependent transport system inner membrane component D5085_00240 PF00578 AhpC/TSA family D5085_00255 PF00999 Sodium/hydrogen exchanger family D5085_00255 PF03471 Transporter associated domain D5085_00285 PF00194 Eukaryotic-type carbonic anhydrase D5085_00305 PF13514 AAA domain D5085_00310 PF00149 Calcineurin-like phosphoesterase D5085_00315 PF01139 tRNA-splicing ligase RtcB D5085_00355 PF00343 Carbohydrate phosphorylase D5085_00360 PF09364 XFP N-terminal domain D5085_00360 PF09363 XFP C-terminal domain D5085_00360 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase D5085_00365 PF00730 HhH-GPD superfamily base excision DNA repair protein D5085_00380 PF01051 Initiator Replication protein D5085_00385 PF13614 AAA domain D5085_00400 PF13686 DsrE/DsrF/DrsH-like family D5085_00405 PF01206 Sulfurtransferase TusA D5085_00410 PF16925 Tetracyclin repressor-like, C-terminal domain D5085_00410 PF00440 Bacterial regulatory proteins, tetR family D5085_00415 PF08448 PAS fold D5085_00415 PF00990 Diguanylate cyclase, GGDEF domain D5085_00420 PF00892 EamA-like transporter family D5085_00435 PF00563 EAL domain D5085_00435 PF03707 Bacterial signalling protein N terminal repeat D5085_00435 PF00990 Diguanylate cyclase, GGDEF domain D5085_00440 PF13538 UvrD-like helicase C-terminal domain D5085_00445 PF17946 RecC C-terminal domain D5085_00455 PF03453 MoeA N-terminal region (domain I and II) D5085_00455 PF00994 Probable molybdopterin binding domain D5085_00455 PF03454 MoeA C-terminal region (domain IV) D5085_00460 PF00994 Probable molybdopterin binding domain D5085_00465 PF00196 Bacterial regulatory proteins, luxR family D5085_00465 PF00072 Response regulator receiver domain D5085_00470 PF07730 Histidine kinase D5085_00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_00470 PF00672 HAMP domain D5085_00470 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D5085_00475 PF07690 Major Facilitator Superfamily D5085_00480 PF07690 Major Facilitator Superfamily D5085_00485 PF14710 Respiratory nitrate reductase alpha N-terminal D5085_00485 PF00384 Molybdopterin oxidoreductase D5085_00485 PF01568 Molydopterin dinucleotide binding domain D5085_00490 PF14711 Respiratory nitrate reductase beta C-terminal D5085_00490 PF13247 4Fe-4S dicluster domain D5085_00495 PF02613 Nitrate reductase delta subunit D5085_00500 PF02665 Nitrate reductase gamma subunit D5085_00505 PF04358 DsrC like protein D5085_00510 PF04055 Radical SAM superfamily D5085_00510 PF06463 Molybdenum Cofactor Synthesis C D5085_00515 PF00484 Carbonic anhydrase D5085_00520 PF00176 SNF2 family N-terminal domain D5085_00520 PF00271 Helicase conserved C-terminal domain D5085_00540 PF01555 DNA methylase D5085_00540 PF18273 Type III R-M EcoP15I C-terminal domain D5085_00580 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D5085_00590 PF00293 NUDIX domain D5085_00595 PF17946 RecC C-terminal domain D5085_00600 PF12705 PD-(D/E)XK nuclease superfamily D5085_00600 PF00580 UvrD/REP helicase N-terminal domain D5085_00600 PF13361 UvrD-like helicase C-terminal domain D5085_00605 PF13538 UvrD-like helicase C-terminal domain D5085_00720 PF03781 Sulfatase-modifying factor enzyme 1 D5085_00730 PF00665 Integrase core domain D5085_00755 PF05717 IS66 Orf2 like protein D5085_00800 PF12161 HsdM N-terminal domain D5085_00800 PF02384 N-6 DNA Methylase D5085_00810 PF06250 YhcG PDDEXK nuclease domain D5085_00810 PF17761 DUF1016 N-terminal domain D5085_00815 PF18766 SWI2/SNF2 ATPase D5085_00815 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D5085_00815 PF11867 Domain of unknown function (DUF3387) D5085_00845 PF00580 UvrD/REP helicase N-terminal domain D5085_00845 PF13361 UvrD-like helicase C-terminal domain D5085_00895 PF03120 NAD-dependent DNA ligase OB-fold domain D5085_00895 PF01653 NAD-dependent DNA ligase adenylation domain D5085_00895 PF00533 BRCA1 C Terminus (BRCT) domain D5085_00905 PF02661 Fic/DOC family D5085_00915 PF04997 RNA polymerase Rpb1, domain 1 D5085_00915 PF04565 RNA polymerase Rpb2, domain 3 D5085_00915 PF04560 RNA polymerase Rpb2, domain 7 D5085_00915 PF00562 RNA polymerase Rpb2, domain 6 D5085_00915 PF04561 RNA polymerase Rpb2, domain 2 D5085_00915 PF04983 RNA polymerase Rpb1, domain 3 D5085_00915 PF00623 RNA polymerase Rpb1, domain 2 D5085_00915 PF10385 RNA polymerase beta subunit external 1 domain D5085_00915 PF04998 RNA polymerase Rpb1, domain 5 D5085_00915 PF04997 RNA polymerase Rpb1, domain 1 D5085_00915 PF04560 RNA polymerase Rpb2, domain 7 D5085_00915 PF00562 RNA polymerase Rpb2, domain 6 D5085_00915 PF00623 RNA polymerase Rpb1, domain 2 D5085_00915 PF04983 RNA polymerase Rpb1, domain 3 D5085_00915 PF10385 RNA polymerase beta subunit external 1 domain D5085_00915 PF04563 RNA polymerase beta subunit D5085_00915 PF04561 RNA polymerase Rpb2, domain 2 D5085_00915 PF04563 RNA polymerase beta subunit D5085_00915 PF04998 RNA polymerase Rpb1, domain 5 D5085_00915 PF05000 RNA polymerase Rpb1, domain 4 D5085_00915 PF04565 RNA polymerase Rpb2, domain 3 D5085_00915 PF05000 RNA polymerase Rpb1, domain 4 D5085_00925 PF01590 GAF domain D5085_00925 PF00158 Sigma-54 interaction domain D5085_00925 PF02954 Bacterial regulatory protein, Fis family D5085_00945 PF09827 CRISPR associated protein Cas2 D5085_01015 PF01867 CRISPR associated protein Cas1 D5085_01025 PF05717 IS66 Orf2 like protein D5085_01060 PF01694 Rhomboid family D5085_01075 PF06733 DEAD_2 D5085_01075 PF13307 Helicase C-terminal domain D5085_01080 PF00436 Single-strand binding protein family D5085_01125 PF00158 Sigma-54 interaction domain D5085_01125 PF00072 Response regulator receiver domain D5085_01125 PF02954 Bacterial regulatory protein, Fis family D5085_01170 PF12724 Flavodoxin domain D5085_01235 PF00005 ABC transporter D5085_01245 PF00753 Metallo-beta-lactamase superfamily D5085_01265 PF13018 Extended Signal Peptide of Type V secretion system D5085_01265 PF02661 Fic/DOC family D5085_01265 PF13332 Hemagglutinin repeat D5085_01265 PF05860 haemagglutination activity domain D5085_01265 PF03543 Yersinia/Haemophilus virulence surface antigen D5085_01300 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding D5085_01300 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5085_01300 PF10518 TAT (twin-arginine translocation) pathway signal sequence D5085_01330 PF01967 MoaC family D5085_01350 PF12804 MobA-like NTP transferase domain D5085_01355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_01355 PF00672 HAMP domain D5085_01375 PF00034 Cytochrome c D5085_01380 PF00115 Cytochrome C and Quinol oxidase polypeptide I D5085_01390 PF08406 CbbQ/NirQ/NorQ C-terminal D5085_01390 PF07728 AAA domain (dynein-related subfamily) D5085_01400 PF00027 Cyclic nucleotide-binding domain D5085_01400 PF13545 Crp-like helix-turn-helix domain D5085_01410 PF00348 Polyprenyl synthetase D5085_01470 PF00091 Tubulin/FtsZ family, GTPase domain D5085_01470 PF12327 FtsZ family, C-terminal domain D5085_01475 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D5085_01495 PF00708 Acylphosphatase D5085_01510 PF01906 Putative heavy-metal-binding D5085_01560 PF08281 Sigma-70, region 4 D5085_01560 PF04542 Sigma-70 region 2 D5085_01590 PF00529 HlyD membrane-fusion protein of T1SS D5085_01590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5085_01595 PF00664 ABC transporter transmembrane region D5085_01595 PF00005 ABC transporter D5085_01605 PF13181 Tetratricopeptide repeat D5085_01610 PF03658 RnfH family Ubiquitin D5085_01615 PF03364 Polyketide cyclase / dehydrase and lipid transport D5085_01675 PF00152 tRNA synthetases class II (D, K and N) D5085_01675 PF01336 OB-fold nucleic acid binding domain D5085_01690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D5085_01695 PF01634 ATP phosphoribosyltransferase D5085_01700 PF00815 Histidinol dehydrogenase D5085_01705 PF02580 D-Tyr-tRNA(Tyr) deacylase D5085_01715 PF00890 FAD binding domain D5085_01715 PF02910 Fumarate reductase flavoprotein C-term D5085_01720 PF00700 Bacterial flagellin C-terminal helical region D5085_01720 PF00669 Bacterial flagellin N-terminal helical region D5085_01725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5085_01725 PF00460 Flagella basal body rod protein D5085_01730 PF13458 Periplasmic binding protein D5085_01745 PF13302 Acetyltransferase (GNAT) domain D5085_01745 PF00027 Cyclic nucleotide-binding domain D5085_01750 PF05175 Methyltransferase small domain D5085_01755 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D5085_01755 PF12557 Cob(I)alamin adenosyltransferase N terminal D5085_01765 PF01628 HrcA protein C terminal domain D5085_01770 PF01025 GrpE D5085_01775 PF00012 Hsp70 protein D5085_01780 PF01556 DnaJ C terminal domain D5085_01780 PF00226 DnaJ domain D5085_01780 PF00684 DnaJ central domain D5085_01790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_01790 PF00672 HAMP domain D5085_01800 PF10005 zinc-ribbon domain D5085_01800 PF15887 Putative zinc-binding metallo-peptidase D5085_01845 PF01515 Phosphate acetyl/butaryl transferase D5085_01845 PF07085 DRTGG domain D5085_01850 PF00871 Acetokinase family D5085_01860 PF00224 Pyruvate kinase, barrel domain D5085_01860 PF00391 PEP-utilising enzyme, mobile domain D5085_01860 PF02887 Pyruvate kinase, alpha/beta domain D5085_01870 PF02325 YGGT family D5085_01875 PF03807 NADP oxidoreductase coenzyme F420-dependent D5085_01875 PF14748 Pyrroline-5-carboxylate reductase dimerisation D5085_01885 PF00085 Thioredoxin D5085_01890 PF01479 S4 domain D5085_01895 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D5085_01900 PF00563 EAL domain D5085_01900 PF00990 Diguanylate cyclase, GGDEF domain D5085_01900 PF03707 Bacterial signalling protein N terminal repeat D5085_01905 PF00528 Binding-protein-dependent transport system inner membrane component D5085_01910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5085_01915 PF03232 Ubiquinone biosynthesis protein COQ7 D5085_01925 PF02355 Protein export membrane protein D5085_01925 PF07549 SecD/SecF GG Motif D5085_01930 PF02355 Protein export membrane protein D5085_01930 PF07549 SecD/SecF GG Motif D5085_01930 PF13721 SecD export protein N-terminal TM region D5085_01935 PF02699 Preprotein translocase subunit D5085_01945 PF02683 Cytochrome C biogenesis protein transmembrane region D5085_01945 PF11412 Disulphide bond corrector protein DsbC D5085_01955 PF04358 DsrC like protein D5085_01975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D5085_01975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D5085_01980 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D5085_01980 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D5085_01985 PF02635 DsrE/DsrF-like family D5085_01990 PF02635 DsrE/DsrF-like family D5085_01995 PF04077 DsrH like protein D5085_02000 PF04358 DsrC like protein D5085_02015 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D5085_02015 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5085_02025 PF13247 4Fe-4S dicluster domain D5085_02035 PF00591 Glycosyl transferase family, a/b domain D5085_02035 PF02885 Glycosyl transferase family, helical bundle domain D5085_02040 PF07685 CobB/CobQ-like glutamine amidotransferase domain D5085_02040 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5085_02045 PF00535 Glycosyl transferase family 2 D5085_02050 PF00535 Glycosyl transferase family 2 D5085_02080 PF16363 GDP-mannose 4,6 dehydratase D5085_02135 PF00535 Glycosyl transferase family 2 D5085_02145 PF10531 SLBB domain D5085_02145 PF02563 Polysaccharide biosynthesis/export protein D5085_02155 PF00005 ABC transporter D5085_02160 PF01061 ABC-2 type transporter D5085_02170 PF00534 Glycosyl transferases group 1 D5085_02235 PF05717 IS66 Orf2 like protein D5085_02250 PF08450 SMP-30/Gluconolactonase/LRE-like region D5085_02315 PF01381 Helix-turn-helix D5085_02320 PF05973 Phage derived protein Gp49-like (DUF891) D5085_02355 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA D5085_02385 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA D5085_02410 PF05717 IS66 Orf2 like protein D5085_02425 PF00535 Glycosyl transferase family 2 D5085_02430 PF16363 GDP-mannose 4,6 dehydratase D5085_02465 PF01370 NAD dependent epimerase/dehydratase family D5085_02475 PF16363 GDP-mannose 4,6 dehydratase D5085_02505 PF16363 GDP-mannose 4,6 dehydratase D5085_02530 PF17810 Arginine decarboxylase helical bundle domain D5085_02530 PF17944 Arginine decarboxylase C-terminal helical extension D5085_02530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D5085_02535 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D5085_02540 PF00290 Tryptophan synthase alpha chain D5085_02555 PF13180 PDZ domain D5085_02565 PF00890 FAD binding domain D5085_02565 PF02910 Fumarate reductase flavoprotein C-term D5085_02575 PF03840 Preprotein translocase SecG subunit D5085_02580 PF00121 Triosephosphate isomerase D5085_02585 PF01926 50S ribosome-binding GTPase D5085_02585 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D5085_02595 PF09976 Tetratricopeptide repeat-like domain D5085_02600 PF13393 Histidyl-tRNA synthetase D5085_02600 PF03129 Anticodon binding domain D5085_02605 PF04551 GcpE protein D5085_02610 PF13464 Domain of unknown function (DUF4115) D5085_02620 PF04055 Radical SAM superfamily D5085_02630 PF00581 Rhodanese-like domain D5085_02635 PF17191 RecG wedge domain D5085_02635 PF00270 DEAD/DEAH box helicase D5085_02635 PF00271 Helicase conserved C-terminal domain D5085_02660 PF03958 Bacterial type II/III secretion system short domain D5085_02660 PF00263 Bacterial type II and III secretion system protein D5085_02665 PF01471 Putative peptidoglycan binding domain D5085_02665 PF13401 AAA domain D5085_02680 PF02811 PHP domain D5085_02680 PF14579 Helix-hairpin-helix motif D5085_02680 PF07733 Bacterial DNA polymerase III alpha NTPase domain D5085_02680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D5085_02680 PF01336 OB-fold nucleic acid binding domain D5085_02685 PF00571 CBS domain D5085_02685 PF01380 SIS domain D5085_02775 PF13148 Protein of unknown function (DUF3987) D5085_02805 PF01844 HNH endonuclease D5085_02810 PF00365 Phosphofructokinase D5085_02815 PF01472 PUA domain D5085_02815 PF00696 Amino acid kinase family D5085_02820 PF01926 50S ribosome-binding GTPase D5085_02820 PF01018 GTP1/OBG D5085_02825 PF00072 Response regulator receiver domain D5085_02825 PF01627 Hpt domain D5085_02825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_02825 PF00672 HAMP domain D5085_02825 PF00512 His Kinase A (phospho-acceptor) domain D5085_02830 PF00512 His Kinase A (phospho-acceptor) domain D5085_02830 PF11808 Phosphate regulon sensor protein PhoR D5085_02830 PF00989 PAS fold D5085_02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_02835 PF05362 Lon protease (S16) C-terminal proteolytic domain D5085_02835 PF13654 AAA domain D5085_02840 PF12848 ABC transporter D5085_02840 PF00005 ABC transporter D5085_02845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_02845 PF00672 HAMP domain D5085_02845 PF17200 Single Cache domain 2 D5085_02850 PF03649 Uncharacterised protein family (UPF0014) D5085_02855 PF00005 ABC transporter D5085_02865 PF00849 RNA pseudouridylate synthase D5085_02865 PF01479 S4 domain D5085_02870 PF04079 Segregation and condensation complex subunit ScpB D5085_02875 PF02616 Segregation and condensation protein ScpA D5085_02880 PF00579 tRNA synthetases class I (W and Y) D5085_02885 PF02163 Peptidase family M50 D5085_02890 PF01300 Telomere recombination D5085_02895 PF02811 PHP domain D5085_02910 PF00011 Hsp20/alpha crystallin family D5085_02915 PF09335 SNARE associated Golgi protein D5085_02920 PF00672 HAMP domain D5085_02920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_02920 PF00512 His Kinase A (phospho-acceptor) domain D5085_02920 PF01627 Hpt domain D5085_02920 PF00072 Response regulator receiver domain D5085_02920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_02940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_02940 PF00672 HAMP domain D5085_02945 PF01584 CheW-like domain D5085_02945 PF00072 Response regulator receiver domain D5085_02945 PF01627 Hpt domain D5085_02945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_02955 PF00072 Response regulator receiver domain D5085_02965 PF01040 UbiA prenyltransferase family D5085_02970 PF01565 FAD binding domain D5085_02970 PF04030 D-arabinono-1,4-lactone oxidase D5085_02975 PF00106 short chain dehydrogenase D5085_02985 PF11700 Vacuole effluxer Atg22 like D5085_03000 PF01648 4'-phosphopantetheinyl transferase superfamily D5085_03015 PF01709 Transcriptional regulator D5085_03055 PF04461 Protein of unknown function (DUF520) D5085_03060 PF13098 Thioredoxin-like domain D5085_03060 PF10411 Disulfide bond isomerase protein N-terminus D5085_03065 PF01351 Ribonuclease HII D5085_03070 PF00990 Diguanylate cyclase, GGDEF domain D5085_03070 PF00563 EAL domain D5085_03070 PF03707 Bacterial signalling protein N terminal repeat D5085_03070 PF13188 PAS domain D5085_03080 PF06339 Ectoine synthase D5085_03085 PF07993 Male sterility protein D5085_03085 PF00668 Condensation domain D5085_03085 PF13193 AMP-binding enzyme C-terminal domain D5085_03085 PF00501 AMP-binding enzyme D5085_03085 PF00550 Phosphopantetheine attachment site D5085_03090 PF00202 Aminotransferase class-III D5085_03100 PF04241 Protein of unknown function (DUF423) D5085_03120 PF01381 Helix-turn-helix D5085_03125 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB D5085_03135 PF00072 Response regulator receiver domain D5085_03140 PF13466 STAS domain D5085_03145 PF00672 HAMP domain D5085_03145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_03145 PF17200 Single Cache domain 2 D5085_03150 PF01339 CheB methylesterase D5085_03150 PF00072 Response regulator receiver domain D5085_03155 PF03975 CheD chemotactic sensory transduction D5085_03160 PF03705 CheR methyltransferase, all-alpha domain D5085_03160 PF01739 CheR methyltransferase, SAM binding domain D5085_03165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_03165 PF00672 HAMP domain D5085_03165 PF02203 Tar ligand binding domain homologue D5085_03170 PF01584 CheW-like domain D5085_03175 PF01584 CheW-like domain D5085_03175 PF02895 Signal transducing histidine kinase, homodimeric domain D5085_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_03175 PF01627 Hpt domain D5085_03180 PF00072 Response regulator receiver domain D5085_03185 PF13614 AAA domain D5085_03200 PF00437 Type II/IV secretion system protein D5085_03200 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D5085_03205 PF00482 Type II secretion system (T2SS), protein F D5085_03210 PF06750 Bacterial Peptidase A24 N-terminal domain D5085_03210 PF01478 Type IV leader peptidase family D5085_03215 PF01121 Dephospho-CoA kinase D5085_03220 PF17757 UvrB interaction domain D5085_03220 PF00270 DEAD/DEAH box helicase D5085_03220 PF03461 TRCF domain D5085_03220 PF00271 Helicase conserved C-terminal domain D5085_03220 PF02559 CarD-like/TRCF domain D5085_03230 PF02769 AIR synthase related protein, C-terminal domain D5085_03230 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D5085_03230 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D5085_03235 PF01026 TatD related DNase D5085_03245 PF01584 CheW-like domain D5085_03245 PF00072 Response regulator receiver domain D5085_03255 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5085_03255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_03255 PF00512 His Kinase A (phospho-acceptor) domain D5085_03260 PF11849 Domain of unknown function (DUF3369) D5085_03280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5085_03330 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D5085_03335 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_03335 PF00512 His Kinase A (phospho-acceptor) domain D5085_03335 PF01627 Hpt domain D5085_03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_03335 PF00672 HAMP domain D5085_03335 PF00072 Response regulator receiver domain D5085_03340 PF00072 Response regulator receiver domain D5085_03345 PF02028 BCCT, betaine/carnitine/choline family transporter D5085_03350 PF04321 RmlD substrate binding domain D5085_03365 PF00873 AcrB/AcrD/AcrF family D5085_03370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_03370 PF12729 Four helix bundle sensory module for signal transduction D5085_03370 PF00672 HAMP domain D5085_03380 PF13519 von Willebrand factor type A domain D5085_03380 PF07584 Aerotolerance regulator N-terminal D5085_03385 PF13519 von Willebrand factor type A domain D5085_03395 PF01882 Protein of unknown function DUF58 D5085_03400 PF00990 Diguanylate cyclase, GGDEF domain D5085_03400 PF17158 Membrane-associated sensor, integral membrane domain D5085_03420 PF00696 Amino acid kinase family D5085_03420 PF00583 Acetyltransferase (GNAT) family D5085_03425 PF02347 Glycine cleavage system P-protein D5085_03430 PF02347 Glycine cleavage system P-protein D5085_03435 PF01597 Glycine cleavage H-protein D5085_03440 PF01571 Aminomethyltransferase folate-binding domain D5085_03440 PF08669 Glycine cleavage T-protein C-terminal barrel domain D5085_03445 PF04055 Radical SAM superfamily D5085_03445 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D5085_03450 PF00512 His Kinase A (phospho-acceptor) domain D5085_03450 PF00072 Response regulator receiver domain D5085_03450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_03450 PF00672 HAMP domain D5085_03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_03450 PF01627 Hpt domain D5085_03455 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D5085_03455 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D5085_03460 PF00155 Aminotransferase class I and II D5085_03465 PF01966 HD domain D5085_03495 PF00270 DEAD/DEAH box helicase D5085_03495 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D5085_03495 PF00271 Helicase conserved C-terminal domain D5085_03495 PF11898 Domain of unknown function (DUF3418) D5085_03495 PF04408 Helicase associated domain (HA2) D5085_03505 PF08448 PAS fold D5085_03505 PF00990 Diguanylate cyclase, GGDEF domain D5085_03510 PF01966 HD domain D5085_03510 PF01743 Poly A polymerase head domain D5085_03510 PF12627 Probable RNA and SrmB- binding site of polymerase A D5085_03515 PF00829 Ribosomal prokaryotic L21 protein D5085_03520 PF01016 Ribosomal L27 protein D5085_03525 PF00224 Pyruvate kinase, barrel domain D5085_03525 PF02887 Pyruvate kinase, alpha/beta domain D5085_03525 PF00391 PEP-utilising enzyme, mobile domain D5085_03535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D5085_03535 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D5085_03550 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D5085_03550 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D5085_03560 PF03773 Predicted permease D5085_03575 PF04542 Sigma-70 region 2 D5085_03575 PF08281 Sigma-70, region 4 D5085_03595 PF12804 MobA-like NTP transferase domain D5085_03595 PF14602 Hexapeptide repeat of succinyl-transferase D5085_03595 PF00132 Bacterial transferase hexapeptide (six repeats) D5085_03600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5085_03605 PF01678 Diaminopimelate epimerase D5085_03615 PF00589 Phage integrase family D5085_03615 PF02899 Phage integrase, N-terminal SAM-like domain D5085_03635 PF02915 Rubrerythrin D5085_03640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_03640 PF00672 HAMP domain D5085_03640 PF12729 Four helix bundle sensory module for signal transduction D5085_03645 PF00578 AhpC/TSA family D5085_03650 PF13638 PIN domain D5085_03650 PF02562 PhoH-like protein D5085_03665 PF00227 Proteasome subunit D5085_03670 PF00004 ATPase family associated with various cellular activities (AAA) D5085_03670 PF07724 AAA domain (Cdc48 subfamily) D5085_03670 PF10431 C-terminal, D2-small domain, of ClpB protein D5085_03680 PF01209 ubiE/COQ5 methyltransferase family D5085_03695 PF03109 ABC1 family D5085_03700 PF08264 Anticodon-binding domain of tRNA D5085_03700 PF00133 tRNA synthetases class I (I, L, M and V) D5085_03700 PF10458 Valyl tRNA synthetase tRNA binding arm D5085_03705 PF03976 Polyphosphate kinase 2 (PPK2) D5085_03715 PF02934 GatB/GatE catalytic domain D5085_03715 PF02637 GatB domain D5085_03720 PF01425 Amidase D5085_03725 PF02686 Glu-tRNAGln amidotransferase C subunit D5085_03730 PF00701 Dihydrodipicolinate synthetase family D5085_03740 PF00753 Metallo-beta-lactamase superfamily D5085_03745 PF01259 SAICAR synthetase D5085_03750 PF01464 Transglycosylase SLT domain D5085_03750 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5085_03755 PF00749 tRNA synthetases class I (E and Q), catalytic domain D5085_03760 PF13183 4Fe-4S dicluster domain D5085_03760 PF13085 2Fe-2S iron-sulfur cluster binding domain D5085_03765 PF04262 Glutamate-cysteine ligase D5085_03780 PF01050 Mannose-6-phosphate isomerase D5085_03780 PF00483 Nucleotidyl transferase D5085_03785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5085_03785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5085_03785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5085_03785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5085_03805 PF13537 Glutamine amidotransferase domain D5085_03805 PF00733 Asparagine synthase D5085_03815 PF01209 ubiE/COQ5 methyltransferase family D5085_03825 PF14602 Hexapeptide repeat of succinyl-transferase D5085_03825 PF12464 Maltose acetyltransferase D5085_03830 PF01209 ubiE/COQ5 methyltransferase family D5085_03860 PF00270 DEAD/DEAH box helicase D5085_03860 PF17191 RecG wedge domain D5085_03860 PF13749 Putative ATP-dependent DNA helicase recG C-terminal D5085_03875 PF00535 Glycosyl transferase family 2 D5085_03890 PF00535 Glycosyl transferase family 2 D5085_03895 PF01894 Uncharacterised protein family UPF0047 D5085_03900 PF00072 Response regulator receiver domain D5085_03900 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_03900 PF01627 Hpt domain D5085_03900 PF00512 His Kinase A (phospho-acceptor) domain D5085_03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_03900 PF00672 HAMP domain D5085_03905 PF00072 Response regulator receiver domain D5085_03925 PF01078 Magnesium chelatase, subunit ChlI D5085_03925 PF13335 Magnesium chelatase, subunit ChlI C-terminal D5085_03930 PF04380 Membrane fusogenic activity D5085_03935 PF02075 Crossover junction endodeoxyribonuclease RuvC D5085_03950 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D5085_03950 PF00534 Glycosyl transferases group 1 D5085_03955 PF03279 Bacterial lipid A biosynthesis acyltransferase D5085_03960 PF00145 C-5 cytosine-specific DNA methylase D5085_03975 PF05685 Putative restriction endonuclease D5085_03990 PF03781 Sulfatase-modifying factor enzyme 1 D5085_04025 PF03781 Sulfatase-modifying factor enzyme 1 D5085_04050 PF03781 Sulfatase-modifying factor enzyme 1 D5085_04055 PF00400 WD domain, G-beta repeat D5085_04055 PF12894 Anaphase-promoting complex subunit 4 WD40 domain D5085_04065 PF00400 WD domain, G-beta repeat D5085_04065 PF12894 Anaphase-promoting complex subunit 4 WD40 domain D5085_04110 PF03781 Sulfatase-modifying factor enzyme 1 D5085_04160 PF03781 Sulfatase-modifying factor enzyme 1 D5085_04185 PF00486 Transcriptional regulatory protein, C terminal D5085_04185 PF00072 Response regulator receiver domain D5085_04190 PF08918 PhoQ Sensor D5085_04190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_04235 PF00117 Glutamine amidotransferase class-I D5085_04235 PF02540 NAD synthase D5085_04235 PF00958 GMP synthase C terminal domain D5085_04260 PF00266 Aminotransferase class-V D5085_04295 PF04055 Radical SAM superfamily D5085_04305 PF01063 Amino-transferase class IV D5085_04310 PF07943 Penicillin-binding protein 5, C-terminal domain D5085_04310 PF00768 D-alanyl-D-alanine carboxypeptidase D5085_04315 PF03330 Lytic transglycolase D5085_04315 PF05036 Sporulation related domain D5085_04320 PF13406 Transglycosylase SLT domain D5085_04325 PF01098 Cell cycle protein D5085_04330 PF03717 Penicillin-binding Protein dimerisation domain D5085_04330 PF00905 Penicillin binding protein transpeptidase domain D5085_04335 PF04093 rod shape-determining protein MreD D5085_04340 PF04085 rod shape-determining protein MreC D5085_04355 PF01513 ATP-NAD kinase D5085_04370 PF00380 Ribosomal protein S9/S16 D5085_04375 PF00572 Ribosomal protein L13 D5085_04380 PF01925 Sulfite exporter TauE/SafE D5085_04395 PF07690 Major Facilitator Superfamily D5085_04400 PF00034 Cytochrome c D5085_04400 PF03150 Di-haem cytochrome c peroxidase D5085_04405 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5085_04410 PF00563 EAL domain D5085_04410 PF05231 MASE1 D5085_04415 PF00990 Diguanylate cyclase, GGDEF domain D5085_04415 PF00072 Response regulator receiver domain D5085_04420 PF11734 TilS substrate C-terminal domain D5085_04420 PF01171 PP-loop family D5085_04420 PF09179 TilS substrate binding domain D5085_04425 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D5085_04430 PF12911 N-terminal TM domain of oligopeptide transport permease C D5085_04430 PF00528 Binding-protein-dependent transport system inner membrane component D5085_04435 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5085_04435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D5085_04440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5085_04445 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg D5085_04445 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II D5085_04470 PF12633 Adenylate cyclase NT domain D5085_04470 PF01295 Adenylate cyclase, class-I D5085_04485 PF01131 DNA topoisomerase D5085_04485 PF01751 Toprim domain D5085_04490 PF01131 DNA topoisomerase D5085_04490 PF01751 Toprim domain D5085_04530 PF01555 DNA methylase D5085_04590 PF00145 C-5 cytosine-specific DNA methylase D5085_04605 PF05717 IS66 Orf2 like protein D5085_04625 PF03781 Sulfatase-modifying factor enzyme 1 D5085_04685 PF03781 Sulfatase-modifying factor enzyme 1 D5085_04760 PF17912 MalK OB fold domain D5085_04760 PF00005 ABC transporter D5085_04805 PF01475 Ferric uptake regulator family D5085_04810 PF00950 ABC 3 transport family D5085_04815 PF00005 ABC transporter D5085_04835 PF01261 Xylose isomerase-like TIM barrel D5085_04845 PF03707 Bacterial signalling protein N terminal repeat D5085_04845 PF00990 Diguanylate cyclase, GGDEF domain D5085_04845 PF00563 EAL domain D5085_04850 PF03705 CheR methyltransferase, all-alpha domain D5085_04850 PF01339 CheB methylesterase D5085_04850 PF01739 CheR methyltransferase, SAM binding domain D5085_04850 PF08448 PAS fold D5085_04865 PF00549 CoA-ligase D5085_04865 PF08442 ATP-grasp domain D5085_04870 PF02629 CoA binding domain D5085_04870 PF00549 CoA-ligase D5085_04875 PF02540 NAD synthase D5085_04875 PF00795 Carbon-nitrogen hydrolase D5085_04885 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D5085_04885 PF01464 Transglycosylase SLT domain D5085_04895 PF01747 ATP-sulfurylase D5085_04895 PF14306 PUA-like domain D5085_04900 PF04055 Radical SAM superfamily D5085_04900 PF00919 Uncharacterized protein family UPF0004 D5085_04915 PF01627 Hpt domain D5085_04915 PF00672 HAMP domain D5085_04915 PF00072 Response regulator receiver domain D5085_04915 PF00512 His Kinase A (phospho-acceptor) domain D5085_04915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_04915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_04920 PF13932 GidA associated domain D5085_04920 PF01134 Glucose inhibited division protein A D5085_04925 PF02527 rRNA small subunit methyltransferase G D5085_04930 PF13614 AAA domain D5085_04935 PF02195 ParB-like nuclease domain D5085_04935 PF17762 HTH domain found in ParB protein D5085_04940 PF00468 Ribosomal protein L34 D5085_04945 PF00825 Ribonuclease P D5085_04950 PF01809 Putative membrane protein insertion efficiency factor D5085_04955 PF02096 60Kd inner membrane protein D5085_04955 PF14849 YidC periplasmic domain D5085_04960 PF10396 GTP-binding protein TrmE N-terminus D5085_04960 PF01926 50S ribosome-binding GTPase D5085_04960 PF12631 MnmE helical domain D5085_04965 PF00990 Diguanylate cyclase, GGDEF domain D5085_04965 PF03707 Bacterial signalling protein N terminal repeat D5085_04965 PF00563 EAL domain D5085_04980 PF00989 PAS fold D5085_04980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_04980 PF00512 His Kinase A (phospho-acceptor) domain D5085_05005 PF16363 GDP-mannose 4,6 dehydratase D5085_05020 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system D5085_05045 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5085_05050 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5085_05055 PF13439 Glycosyltransferase Family 4 D5085_05055 PF00534 Glycosyl transferases group 1 D5085_05060 PF00849 RNA pseudouridylate synthase D5085_05060 PF01479 S4 domain D5085_05065 PF13525 Outer membrane lipoprotein D5085_05070 PF00437 Type II/IV secretion system protein D5085_05075 PF00437 Type II/IV secretion system protein D5085_05080 PF00595 PDZ domain D5085_05085 PF00485 Phosphoribulokinase / Uridine kinase family D5085_05090 PF00905 Penicillin binding protein transpeptidase domain D5085_05090 PF06832 Penicillin-Binding Protein C-terminus Family D5085_05090 PF00912 Transglycosylase D5085_05100 PF00672 HAMP domain D5085_05100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_05100 PF02203 Tar ligand binding domain homologue D5085_05105 PF01380 SIS domain D5085_05110 PF00483 Nucleotidyl transferase D5085_05115 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D5085_05120 PF16363 GDP-mannose 4,6 dehydratase D5085_05125 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D5085_05130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D5085_05145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D5085_05145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D5085_05150 PF02622 Uncharacterized ACR, COG1678 D5085_05155 PF03652 Holliday junction resolvase D5085_05160 PF00175 Oxidoreductase NAD-binding domain D5085_05160 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B D5085_05165 PF13686 DsrE/DsrF/DrsH-like family D5085_05170 PF01206 Sulfurtransferase TusA D5085_05175 PF00581 Rhodanese-like domain D5085_05185 PF08676 MutL C terminal dimerisation domain D5085_05185 PF01119 DNA mismatch repair protein, C-terminal domain D5085_05190 PF11741 AMIN domain D5085_05190 PF01520 N-acetylmuramoyl-L-alanine amidase D5085_05195 PF01196 Ribosomal protein L17 D5085_05200 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D5085_05200 PF01000 RNA polymerase Rpb3/RpoA insert domain D5085_05200 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D5085_05205 PF01479 S4 domain D5085_05205 PF00163 Ribosomal protein S4/S9 N-terminal domain D5085_05210 PF00411 Ribosomal protein S11 D5085_05215 PF00416 Ribosomal protein S13/S18 D5085_05220 PF00444 Ribosomal protein L36 D5085_05225 PF00344 SecY translocase D5085_05230 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D5085_05235 PF00327 Ribosomal protein L30p/L7e D5085_05240 PF03719 Ribosomal protein S5, C-terminal domain D5085_05240 PF00333 Ribosomal protein S5, N-terminal domain D5085_05245 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D5085_05250 PF00347 Ribosomal protein L6 D5085_05255 PF00410 Ribosomal protein S8 D5085_05260 PF00253 Ribosomal protein S14p/S29e D5085_05265 PF00281 Ribosomal protein L5 D5085_05265 PF00673 ribosomal L5P family C-terminus D5085_05270 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D5085_05270 PF00467 KOW motif D5085_05275 PF00238 Ribosomal protein L14p/L23e D5085_05280 PF00366 Ribosomal protein S17 D5085_05285 PF00831 Ribosomal L29 protein D5085_05290 PF00252 Ribosomal protein L16p/L10e D5085_05295 PF07650 KH domain D5085_05295 PF00189 Ribosomal protein S3, C-terminal domain D5085_05300 PF00237 Ribosomal protein L22p/L17e D5085_05305 PF00203 Ribosomal protein S19 D5085_05310 PF03947 Ribosomal Proteins L2, C-terminal domain D5085_05310 PF00181 Ribosomal Proteins L2, RNA binding domain D5085_05315 PF00276 Ribosomal protein L23 D5085_05320 PF00573 Ribosomal protein L4/L1 family D5085_05325 PF00297 Ribosomal protein L3 D5085_05330 PF00338 Ribosomal protein S10p/S20e D5085_05335 PF00009 Elongation factor Tu GTP binding domain D5085_05335 PF03143 Elongation factor Tu C-terminal domain D5085_05335 PF03144 Elongation factor Tu domain 2 D5085_05340 PF14492 Elongation Factor G, domain II D5085_05340 PF03764 Elongation factor G, domain IV D5085_05340 PF00009 Elongation factor Tu GTP binding domain D5085_05340 PF03144 Elongation factor Tu domain 2 D5085_05340 PF00679 Elongation factor G C-terminus D5085_05345 PF00177 Ribosomal protein S7p/S5e D5085_05350 PF00164 Ribosomal protein S12/S23 D5085_05355 PF04983 RNA polymerase Rpb1, domain 3 D5085_05355 PF00623 RNA polymerase Rpb1, domain 2 D5085_05355 PF04998 RNA polymerase Rpb1, domain 5 D5085_05355 PF04997 RNA polymerase Rpb1, domain 1 D5085_05355 PF05000 RNA polymerase Rpb1, domain 4 D5085_05360 PF04560 RNA polymerase Rpb2, domain 7 D5085_05360 PF00562 RNA polymerase Rpb2, domain 6 D5085_05360 PF10385 RNA polymerase beta subunit external 1 domain D5085_05360 PF04565 RNA polymerase Rpb2, domain 3 D5085_05360 PF04561 RNA polymerase Rpb2, domain 2 D5085_05360 PF04563 RNA polymerase beta subunit D5085_05365 PF16320 Ribosomal protein L7/L12 dimerisation domain D5085_05365 PF00542 Ribosomal protein L7/L12 C-terminal domain D5085_05370 PF00466 Ribosomal protein L10 D5085_05375 PF00687 Ribosomal protein L1p/L10e family D5085_05380 PF03946 Ribosomal protein L11, N-terminal domain D5085_05380 PF00298 Ribosomal protein L11, RNA binding domain D5085_05385 PF02357 Transcription termination factor nusG D5085_05385 PF00467 KOW motif D5085_05390 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D5085_05400 PF03143 Elongation factor Tu C-terminal domain D5085_05400 PF00009 Elongation factor Tu GTP binding domain D5085_05400 PF03144 Elongation factor Tu domain 2 D5085_05425 PF02690 Na+/Pi-cotransporter D5085_05435 PF00501 AMP-binding enzyme D5085_05435 PF13193 AMP-binding enzyme C-terminal domain D5085_05435 PF00668 Condensation domain D5085_05435 PF00550 Phosphopantetheine attachment site D5085_05470 PF00512 His Kinase A (phospho-acceptor) domain D5085_05470 PF01627 Hpt domain D5085_05470 PF00072 Response regulator receiver domain D5085_05470 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_05470 PF00672 HAMP domain D5085_05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_05480 PF00072 Response regulator receiver domain D5085_05490 PF17092 Penicillin-binding protein OB-like domain D5085_05490 PF00912 Transglycosylase D5085_05490 PF00905 Penicillin binding protein transpeptidase domain D5085_05500 PF04397 LytTr DNA-binding domain D5085_05500 PF00072 Response regulator receiver domain D5085_05530 PF07669 Eco57I restriction-modification methylase D5085_05530 PF12950 TaqI-like C-terminal specificity domain D5085_05545 PF00145 C-5 cytosine-specific DNA methylase D5085_05570 PF05114 Protein of unknown function (DUF692) D5085_05585 PF04542 Sigma-70 region 2 D5085_05585 PF08281 Sigma-70, region 4 D5085_05585 PF12680 SnoaL-like domain D5085_05600 PF00206 Lyase D5085_05600 PF08328 Adenylosuccinate lyase C-terminal D5085_05605 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D5085_05605 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D5085_05610 PF10369 Small subunit of acetolactate synthase D5085_05615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5085_05615 PF00205 Thiamine pyrophosphate enzyme, central domain D5085_05615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5085_05620 PF02675 S-adenosylmethionine decarboxylase D5085_05625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_05625 PF08447 PAS fold D5085_05630 PF00672 HAMP domain D5085_05630 PF17202 Single cache domain 3 D5085_05630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_05670 PF02769 AIR synthase related protein, C-terminal domain D5085_05670 PF00586 AIR synthase related protein, N-terminal domain D5085_05680 PF00582 Universal stress protein family D5085_05685 PF01740 STAS domain D5085_05685 PF00916 Sulfate permease family D5085_05690 PF00924 Mechanosensitive ion channel D5085_05695 PF04715 Anthranilate synthase component I, N terminal region D5085_05695 PF00425 chorismate binding enzyme D5085_05705 PF00583 Acetyltransferase (GNAT) family D5085_05710 PF04055 Radical SAM superfamily D5085_05710 PF01938 TRAM domain D5085_05710 PF00919 Uncharacterized protein family UPF0004 D5085_05715 PF07486 Cell Wall Hydrolase D5085_05715 PF01471 Putative peptidoglycan binding domain D5085_05720 PF03692 Putative zinc- or iron-chelating domain D5085_05725 PF00814 Glycoprotease family D5085_05730 PF01594 AI-2E family transporter D5085_05740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5085_05740 PF03466 LysR substrate binding domain D5085_05745 PF02824 TGS domain D5085_05745 PF04607 Region found in RelA / SpoT proteins D5085_05745 PF13291 ACT domain D5085_05755 PF00005 ABC transporter D5085_05760 PF12704 MacB-like periplasmic core domain D5085_05760 PF02687 FtsX-like permease family D5085_05765 PF00005 ABC transporter D5085_05765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5085_05790 PF09115 DNA polymerase III, delta subunit, C terminal D5085_05795 PF02223 Thymidylate kinase D5085_05865 PF01699 Sodium/calcium exchanger protein D5085_05870 PF06968 Biotin and Thiamin Synthesis associated domain D5085_05870 PF04055 Radical SAM superfamily D5085_05875 PF00155 Aminotransferase class I and II D5085_05880 PF12697 Alpha/beta hydrolase family D5085_05885 PF08241 Methyltransferase domain D5085_05905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D5085_05905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D5085_05905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D5085_05915 PF04608 Phosphatidylglycerophosphatase A D5085_05920 PF00586 AIR synthase related protein, N-terminal domain D5085_05920 PF02769 AIR synthase related protein, C-terminal domain D5085_05925 PF01029 NusB family D5085_05930 PF00885 6,7-dimethyl-8-ribityllumazine synthase D5085_05935 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D5085_05935 PF00925 GTP cyclohydrolase II D5085_05940 PF00677 Lumazine binding domain D5085_05945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D5085_05945 PF01872 RibD C-terminal domain D5085_05950 PF03477 ATP cone domain D5085_05955 PF00464 Serine hydroxymethyltransferase D5085_06025 PF00990 Diguanylate cyclase, GGDEF domain D5085_06025 PF00563 EAL domain D5085_06025 PF03707 Bacterial signalling protein N terminal repeat D5085_06030 PF14489 QueF-like protein D5085_06040 PF00072 Response regulator receiver domain D5085_06040 PF01339 CheB methylesterase D5085_06060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5085_06060 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5085_06065 PF00132 Bacterial transferase hexapeptide (six repeats) D5085_06070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5085_06070 PF14824 Sirohaem biosynthesis protein central D5085_06070 PF10414 Sirohaem synthase dimerisation region D5085_06090 PF00085 Thioredoxin D5085_06095 PF13533 Biotin-lipoyl like D5085_06100 PF00873 AcrB/AcrD/AcrF family D5085_06130 PF01370 NAD dependent epimerase/dehydratase family D5085_06175 PF00437 Type II/IV secretion system protein D5085_06175 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D5085_06195 PF02321 Outer membrane efflux protein D5085_06205 PF13667 ThiC-associated domain D5085_06205 PF01964 Radical SAM ThiC family D5085_06220 PF06827 Zinc finger found in FPG and IleRS D5085_06220 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D5085_06220 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D5085_06235 PF02561 Flagellar protein FliS D5085_06240 PF07195 Flagellar hook-associated protein 2 C-terminus D5085_06240 PF02465 Flagellar hook-associated protein 2 N-terminus D5085_06250 PF00669 Bacterial flagellin N-terminal helical region D5085_06250 PF00700 Bacterial flagellin C-terminal helical region D5085_06255 PF00669 Bacterial flagellin N-terminal helical region D5085_06255 PF00700 Bacterial flagellin C-terminal helical region D5085_06260 PF00669 Bacterial flagellin N-terminal helical region D5085_06260 PF00700 Bacterial flagellin C-terminal helical region D5085_06270 PF01467 Cytidylyltransferase-like D5085_06270 PF00294 pfkB family carbohydrate kinase D5085_06275 PF13580 SIS domain D5085_06305 PF16363 GDP-mannose 4,6 dehydratase D5085_06310 PF00535 Glycosyl transferase family 2 D5085_06315 PF06463 Molybdenum Cofactor Synthesis C D5085_06315 PF04055 Radical SAM superfamily D5085_06330 PF04055 Radical SAM superfamily D5085_06330 PF02310 B12 binding domain D5085_06340 PF04055 Radical SAM superfamily D5085_06340 PF02310 B12 binding domain D5085_06345 PF08240 Alcohol dehydrogenase GroES-like domain D5085_06345 PF00107 Zinc-binding dehydrogenase D5085_06350 PF13847 Methyltransferase domain D5085_06365 PF02780 Transketolase, C-terminal domain D5085_06365 PF02779 Transketolase, pyrimidine binding domain D5085_06370 PF00456 Transketolase, thiamine diphosphate binding domain D5085_06375 PF16363 GDP-mannose 4,6 dehydratase D5085_06420 PF08666 SAF domain D5085_06420 PF03102 NeuB family D5085_06425 PF02222 ATP-grasp domain D5085_06435 PF00171 Aldehyde dehydrogenase family D5085_06445 PF02911 Formyl transferase, C-terminal domain D5085_06445 PF00551 Formyl transferase D5085_06450 PF16221 winged helix-turn-helix D5085_06450 PF16254 Domain of unknown function (DUF4910) D5085_06450 PF09940 Domain of unknown function (DUF2172) D5085_06455 PF02348 Cytidylyltransferase D5085_06460 PF02719 Polysaccharide biosynthesis protein D5085_06505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D5085_06510 PF06965 Na+/H+ antiporter 1 D5085_06510 PF01343 Peptidase family S49 D5085_06515 PF13419 Haloacid dehalogenase-like hydrolase D5085_06520 PF00849 RNA pseudouridylate synthase D5085_06520 PF01479 S4 domain D5085_06525 PF00483 Nucleotidyl transferase D5085_06530 PF00596 Class II Aldolase and Adducin N-terminal domain D5085_06535 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D5085_06535 PF00749 tRNA synthetases class I (E and Q), catalytic domain D5085_06540 PF02348 Cytidylyltransferase D5085_06545 PF03966 Trm112p-like protein D5085_06550 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D5085_06555 PF00528 Binding-protein-dependent transport system inner membrane component D5085_06560 PF00528 Binding-protein-dependent transport system inner membrane component D5085_06565 PF08402 TOBE domain D5085_06565 PF00005 ABC transporter D5085_06575 PF04379 ApaG domain D5085_06580 PF00149 Calcineurin-like phosphoesterase D5085_06585 PF04539 Sigma-70 region 3 D5085_06585 PF04545 Sigma-70, region 4 D5085_06585 PF04542 Sigma-70 region 2 D5085_06585 PF04546 Sigma-70, non-essential region D5085_06585 PF03979 Sigma-70 factor, region 1.1 D5085_06585 PF00140 Sigma-70 factor, region 1.2 D5085_06590 PF10150 Ribonuclease E/G family D5085_06590 PF12111 Polyribonucleotide phosphorylase C terminal D5085_06590 PF00575 S1 RNA binding domain D5085_06595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_06595 PF00072 Response regulator receiver domain D5085_06595 PF00512 His Kinase A (phospho-acceptor) domain D5085_06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_06595 PF01627 Hpt domain D5085_06595 PF00672 HAMP domain D5085_06605 PF00899 ThiF family D5085_06615 PF13847 Methyltransferase domain D5085_06615 PF17827 PrmC N-terminal domain D5085_06620 PF00472 RF-1 domain D5085_06620 PF03462 PCRF domain D5085_06625 PF01168 Alanine racemase, N-terminal domain D5085_06645 PF00483 Nucleotidyl transferase D5085_06650 PF01551 Peptidase family M23 D5085_06650 PF04225 Opacity-associated protein A LysM-like domain D5085_06660 PF00698 Acyl transferase domain D5085_06665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D5085_06665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D5085_06670 PF02504 Fatty acid synthesis protein D5085_06675 PF01783 Ribosomal L32p protein family D5085_06680 PF02620 Large ribosomal RNA subunit accumulation protein YceD D5085_06685 PF02545 Maf-like protein D5085_06705 PF03449 Transcription elongation factor, N-terminal D5085_06705 PF01272 Transcription elongation factor, GreA/GreB, C-term D5085_06720 PF00156 Phosphoribosyl transferase domain D5085_06725 PF02463 RecF/RecN/SMC N terminal domain D5085_06725 PF06470 SMC proteins Flexible Hinge Domain D5085_06755 PF01327 Polypeptide deformylase D5085_06760 PF00551 Formyl transferase D5085_06760 PF02911 Formyl transferase, C-terminal domain D5085_06765 PF01206 Sulfurtransferase TusA D5085_06770 PF01545 Cation efflux family D5085_06770 PF16916 Dimerisation domain of Zinc Transporter D5085_06785 PF03070 TENA/THI-4/PQQC family D5085_06785 PF08543 Phosphomethylpyrimidine kinase D5085_06785 PF02581 Thiamine monophosphate synthase D5085_06820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D5085_06820 PF04073 Aminoacyl-tRNA editing domain D5085_06820 PF03129 Anticodon binding domain D5085_06855 PF03264 NapC/NirT cytochrome c family, N-terminal region D5085_06925 PF03264 NapC/NirT cytochrome c family, N-terminal region D5085_06935 PF03466 LysR substrate binding domain D5085_06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5085_06985 PF00114 Pilin (bacterial filament) D5085_06985 PF07963 Prokaryotic N-terminal methylation motif D5085_07070 PF17760 UvrA interaction domain D5085_07070 PF17755 UvrA DNA-binding domain D5085_07070 PF00005 ABC transporter D5085_07075 PF13361 UvrD-like helicase C-terminal domain D5085_07075 PF00580 UvrD/REP helicase N-terminal domain D5085_07090 PF00899 ThiF family D5085_07095 PF00490 Delta-aminolevulinic acid dehydratase D5085_07100 PF08501 Shikimate dehydrogenase substrate binding domain D5085_07100 PF01488 Shikimate / quinate 5-dehydrogenase D5085_07100 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D5085_07130 PF02810 SEC-C motif D5085_07175 PF00114 Pilin (bacterial filament) D5085_07175 PF07963 Prokaryotic N-terminal methylation motif D5085_07205 PF04261 Dyp-type peroxidase family D5085_07215 PF14765 Polyketide synthase dehydratase D5085_07215 PF00109 Beta-ketoacyl synthase, N-terminal domain D5085_07215 PF00698 Acyl transferase domain D5085_07215 PF00550 Phosphopantetheine attachment site D5085_07215 PF08240 Alcohol dehydrogenase GroES-like domain D5085_07215 PF16197 Ketoacyl-synthetase C-terminal extension D5085_07215 PF02801 Beta-ketoacyl synthase, C-terminal domain D5085_07215 PF08659 KR domain D5085_07220 PF00886 Ribosomal protein S16 D5085_07225 PF01782 RimM N-terminal domain D5085_07225 PF05239 PRC-barrel domain D5085_07230 PF01746 tRNA (Guanine-1)-methyltransferase D5085_07235 PF01245 Ribosomal protein L19 D5085_07245 PF02805 Metal binding domain of Ada D5085_07245 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D5085_07245 PF12833 Helix-turn-helix domain D5085_07245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D5085_07250 PF00589 Phage integrase family D5085_07250 PF02899 Phage integrase, N-terminal SAM-like domain D5085_07275 PF03975 CheD chemotactic sensory transduction D5085_07290 PF00176 SNF2 family N-terminal domain D5085_07290 PF18339 RapA N-terminal Tudor like domain 1 D5085_07290 PF12137 RNA polymerase recycling family C-terminal D5085_07290 PF18337 RapA N-terminal Tudor like domain D5085_07290 PF00271 Helicase conserved C-terminal domain D5085_07295 PF01266 FAD dependent oxidoreductase D5085_07295 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D5085_07305 PF09424 Yqey-like protein D5085_07310 PF01165 Ribosomal protein S21 D5085_07315 PF00902 Sec-independent protein translocase protein (TatC) D5085_07320 PF02416 mttA/Hcf106 family D5085_07325 PF02416 mttA/Hcf106 family D5085_07330 PF01230 HIT domain D5085_07335 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D5085_07340 PF01502 Phosphoribosyl-AMP cyclohydrolase D5085_07345 PF00977 Histidine biosynthesis protein D5085_07350 PF00977 Histidine biosynthesis protein D5085_07355 PF00117 Glutamine amidotransferase class-I D5085_07360 PF00475 Imidazoleglycerol-phosphate dehydratase D5085_07365 PF00027 Cyclic nucleotide-binding domain D5085_07365 PF13545 Crp-like helix-turn-helix domain D5085_07370 PF02566 OsmC-like protein D5085_07430 PF10127 RNA repair pathway DNA polymerase beta family D5085_07440 PF10127 RNA repair pathway DNA polymerase beta family D5085_07460 PF00271 Helicase conserved C-terminal domain D5085_07460 PF00176 SNF2 family N-terminal domain D5085_07515 PF13361 UvrD-like helicase C-terminal domain D5085_07515 PF00580 UvrD/REP helicase N-terminal domain D5085_07535 PF00850 Histone deacetylase domain D5085_07565 PF04851 Type III restriction enzyme, res subunit D5085_07565 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D5085_07565 PF00271 Helicase conserved C-terminal domain D5085_07565 PF08463 EcoEI R protein C-terminal D5085_07590 PF01420 Type I restriction modification DNA specificity domain D5085_07605 PF01850 PIN domain D5085_07630 PF05717 IS66 Orf2 like protein D5085_07660 PF10127 RNA repair pathway DNA polymerase beta family D5085_07670 PF09704 CRISPR-associated protein (Cas_Cas5) D5085_07690 PF03050 Transposase IS66 family D5085_07755 PF02463 RecF/RecN/SMC N terminal domain D5085_07760 PF10431 C-terminal, D2-small domain, of ClpB protein D5085_07760 PF07724 AAA domain (Cdc48 subfamily) D5085_07760 PF00004 ATPase family associated with various cellular activities (AAA) D5085_07800 PF03050 Transposase IS66 family D5085_07840 PF01867 CRISPR associated protein Cas1 D5085_07845 PF09827 CRISPR associated protein Cas2 D5085_07850 PF07690 Major Facilitator Superfamily D5085_07855 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D5085_07870 PF01960 ArgJ family D5085_07875 PF01043 SecA preprotein cross-linking domain D5085_07875 PF07516 SecA Wing and Scaffold domain D5085_07875 PF07517 SecA DEAD-like domain D5085_07875 PF02810 SEC-C motif D5085_07880 PF01551 Peptidase family M23 D5085_07880 PF08525 Opacity-associated protein A N-terminal motif D5085_07880 PF01476 LysM domain D5085_07890 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D5085_07895 PF00091 Tubulin/FtsZ family, GTPase domain D5085_07895 PF12327 FtsZ family, C-terminal domain D5085_07900 PF02491 SHS2 domain inserted in FTSA D5085_07905 PF03799 Cell division protein FtsQ D5085_07905 PF08478 POTRA domain, FtsQ-type D5085_07910 PF01820 D-ala D-ala ligase N-terminus D5085_07910 PF07478 D-ala D-ala ligase C-terminus D5085_07915 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D5085_07915 PF01565 FAD binding domain D5085_07920 PF02875 Mur ligase family, glutamate ligase domain D5085_07920 PF01225 Mur ligase family, catalytic domain D5085_07920 PF08245 Mur ligase middle domain D5085_07925 PF04101 Glycosyltransferase family 28 C-terminal domain D5085_07925 PF03033 Glycosyltransferase family 28 N-terminal domain D5085_07930 PF01098 Cell cycle protein D5085_07935 PF08245 Mur ligase middle domain D5085_07935 PF02875 Mur ligase family, glutamate ligase domain D5085_07940 PF00953 Glycosyl transferase family 4 D5085_07940 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D5085_07945 PF08245 Mur ligase middle domain D5085_07945 PF02875 Mur ligase family, glutamate ligase domain D5085_07945 PF01225 Mur ligase family, catalytic domain D5085_07950 PF01225 Mur ligase family, catalytic domain D5085_07950 PF02875 Mur ligase family, glutamate ligase domain D5085_07950 PF08245 Mur ligase middle domain D5085_07955 PF00905 Penicillin binding protein transpeptidase domain D5085_07955 PF03717 Penicillin-binding Protein dimerisation domain D5085_07960 PF04999 Cell division protein FtsL D5085_07965 PF01795 MraW methylase family D5085_07970 PF02381 MraZ protein, putative antitoxin-like D5085_07990 PF08406 CbbQ/NirQ/NorQ C-terminal D5085_07990 PF07728 AAA domain (dynein-related subfamily) D5085_07995 PF00970 Oxidoreductase FAD-binding domain D5085_07995 PF00111 2Fe-2S iron-sulfur cluster binding domain D5085_07995 PF00175 Oxidoreductase NAD-binding domain D5085_08000 PF02386 Cation transport protein D5085_08005 PF02080 TrkA-C domain D5085_08005 PF02254 TrkA-N domain D5085_08010 PF01029 NusB family D5085_08010 PF01189 16S rRNA methyltransferase RsmB/F D5085_08015 PF04976 DMSO reductase anchor subunit (DmsC) D5085_08020 PF13247 4Fe-4S dicluster domain D5085_08020 PF12800 4Fe-4S binding domain D5085_08025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5085_08025 PF00384 Molybdopterin oxidoreductase D5085_08025 PF01568 Molydopterin dinucleotide binding domain D5085_08030 PF11638 DnaA N-terminal domain D5085_08030 PF08299 Bacterial dnaA protein helix-turn-helix D5085_08030 PF00308 Bacterial dnaA protein D5085_08035 PF02767 DNA polymerase III beta subunit, central domain D5085_08035 PF00712 DNA polymerase III beta subunit, N-terminal domain D5085_08035 PF02768 DNA polymerase III beta subunit, C-terminal domain D5085_08040 PF02463 RecF/RecN/SMC N terminal domain D5085_08045 PF18053 DNA gyrase B subunit insert domain D5085_08045 PF01751 Toprim domain D5085_08045 PF00986 DNA gyrase B subunit, carboxyl terminus D5085_08045 PF00204 DNA gyrase B D5085_08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_08050 PF00750 tRNA synthetases class I (R) D5085_08050 PF05746 DALR anticodon binding domain D5085_08050 PF03485 Arginyl tRNA synthetase N terminal domain D5085_08055 PF17954 Quercetinase C-terminal cupin domain D5085_08055 PF02678 Pirin D5085_08075 PF02092 Glycyl-tRNA synthetase beta subunit D5085_08075 PF05746 DALR anticodon binding domain D5085_08080 PF02091 Glycyl-tRNA synthetase alpha subunit D5085_08085 PF08299 Bacterial dnaA protein helix-turn-helix D5085_08085 PF00308 Bacterial dnaA protein D5085_08090 PF01594 AI-2E family transporter D5085_08110 PF01202 Shikimate kinase D5085_08115 PF01761 3-dehydroquinate synthase D5085_08125 PF13401 AAA domain D5085_08125 PF01471 Putative peptidoglycan binding domain D5085_08130 PF01207 Dihydrouridine synthase (Dus) D5085_08135 PF02954 Bacterial regulatory protein, Fis family D5085_08140 PF00501 AMP-binding enzyme D5085_08140 PF00550 Phosphopantetheine attachment site D5085_08140 PF00668 Condensation domain D5085_08140 PF13193 AMP-binding enzyme C-terminal domain D5085_08155 PF01593 Flavin containing amine oxidoreductase D5085_08165 PF05118 Aspartyl/Asparaginyl beta-hydroxylase D5085_08165 PF05373 L-proline 3-hydroxylase, C-terminal D5085_08175 PF02142 MGS-like domain D5085_08175 PF01808 AICARFT/IMPCHase bienzyme D5085_08190 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5085_08195 PF01924 Hydrogenase formation hypA family D5085_08205 PF00117 Glutamine amidotransferase class-I D5085_08215 PF03358 NADPH-dependent FMN reductase D5085_08220 PF06962 Putative rRNA methylase D5085_08225 PF02219 Methylenetetrahydrofolate reductase D5085_08230 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D5085_08230 PF05221 S-adenosyl-L-homocysteine hydrolase D5085_08235 PF01116 Fructose-bisphosphate aldolase class-II D5085_08240 PF00117 Glutamine amidotransferase class-I D5085_08245 PF02885 Glycosyl transferase family, helical bundle domain D5085_08245 PF00591 Glycosyl transferase family, a/b domain D5085_08250 PF00218 Indole-3-glycerol phosphate synthase D5085_08255 PF00459 Inositol monophosphatase family D5085_08260 PF00672 HAMP domain D5085_08260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_08270 PF00719 Inorganic pyrophosphatase D5085_08275 PF01627 Hpt domain D5085_08275 PF00512 His Kinase A (phospho-acceptor) domain D5085_08275 PF00072 Response regulator receiver domain D5085_08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_08275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_08275 PF00672 HAMP domain D5085_08280 PF02222 ATP-grasp domain D5085_08280 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D5085_08285 PF00731 AIR carboxylase D5085_08290 PF01926 50S ribosome-binding GTPase D5085_08290 PF13167 GTP-binding GTPase N-terminal D5085_08290 PF16360 GTP-binding GTPase Middle Region D5085_08295 PF17209 Hfq protein D5085_08300 PF00830 Ribosomal L28 family D5085_08305 PF00471 Ribosomal protein L33 D5085_08320 PF01968 Hydantoinase/oxoprolinase D5085_08320 PF05378 Hydantoinase/oxoprolinase N-terminal region D5085_08325 PF00072 Response regulator receiver domain D5085_08325 PF00672 HAMP domain D5085_08325 PF01627 Hpt domain D5085_08325 PF00512 His Kinase A (phospho-acceptor) domain D5085_08325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_08325 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_08330 PF00005 ABC transporter D5085_08350 PF05685 Putative restriction endonuclease D5085_08355 PF00072 Response regulator receiver domain D5085_08355 PF00486 Transcriptional regulatory protein, C terminal D5085_08365 PF13640 2OG-Fe(II) oxygenase superfamily D5085_08365 PF18331 PKHD-type hydroxylase C-terminal domain D5085_08370 PF01264 Chorismate synthase D5085_08395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5085_08400 PF07690 Major Facilitator Superfamily D5085_08425 PF00202 Aminotransferase class-III D5085_08430 PF00436 Single-strand binding protein family D5085_08435 PF00834 Ribulose-phosphate 3 epimerase family D5085_08440 PF13419 Haloacid dehalogenase-like hydrolase D5085_08445 PF04715 Anthranilate synthase component I, N terminal region D5085_08445 PF00425 chorismate binding enzyme D5085_08450 PF00875 DNA photolyase D5085_08450 PF03441 FAD binding domain of DNA photolyase D5085_08455 PF01595 Cyclin M transmembrane N-terminal domain D5085_08455 PF00571 CBS domain D5085_08455 PF03471 Transporter associated domain D5085_08460 PF01595 Cyclin M transmembrane N-terminal domain D5085_08460 PF03471 Transporter associated domain D5085_08460 PF00571 CBS domain D5085_08475 PF17864 RuvB AAA lid domain D5085_08475 PF05496 Holliday junction DNA helicase RuvB P-loop domain D5085_08475 PF05491 RuvB C-terminal winged helix domain D5085_08480 PF03061 Thioesterase superfamily D5085_08485 PF01618 MotA/TolQ/ExbB proton channel family D5085_08490 PF02472 Biopolymer transport protein ExbD/TolR D5085_08500 PF07676 WD40-like Beta Propeller Repeat D5085_08500 PF04052 TolB amino-terminal domain D5085_08505 PF00691 OmpA family D5085_08515 PF04055 Radical SAM superfamily D5085_08550 PF11741 AMIN domain D5085_08550 PF07660 Secretin and TonB N terminus short domain D5085_08550 PF00263 Bacterial type II and III secretion system protein D5085_08550 PF03958 Bacterial type II/III secretion system short domain D5085_08555 PF02369 Bacterial Ig-like domain (group 1) D5085_08555 PF09134 Invasin, domain 3 D5085_08555 PF11924 Inverse autotransporter, beta-domain D5085_08585 PF02575 YbaB/EbfC DNA-binding family D5085_08590 PF13662 Toprim domain D5085_08590 PF02132 RecR protein D5085_08595 PF08019 Phosphoethanolamine transferase EptA/EptB D5085_08595 PF00884 Sulfatase D5085_08610 PF10518 TAT (twin-arginine translocation) pathway signal sequence D5085_08610 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding D5085_08610 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5085_08630 PF01435 Peptidase family M48 D5085_08635 PF00929 Exonuclease D5085_08645 PF02154 Flagellar motor switch protein FliM D5085_08645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D5085_08650 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D5085_08655 PF04347 Flagellar biosynthesis protein, FliO D5085_08660 PF00813 FliP family D5085_08665 PF01313 Bacterial export proteins, family 3 D5085_08670 PF01311 Bacterial export proteins, family 1 D5085_08675 PF01312 FlhB HrpN YscU SpaS Family D5085_08680 PF00771 FHIPEP family D5085_08685 PF00448 SRP54-type protein, GTPase domain D5085_08690 PF10609 NUBPL iron-transfer P-loop NTPase D5085_08695 PF04545 Sigma-70, region 4 D5085_08695 PF04539 Sigma-70 region 3 D5085_08695 PF04542 Sigma-70 region 2 D5085_08700 PF00072 Response regulator receiver domain D5085_08705 PF04344 Chemotaxis phosphatase, CheZ D5085_08710 PF01584 CheW-like domain D5085_08710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_08710 PF07194 P2 response regulator binding domain D5085_08710 PF01627 Hpt domain D5085_08710 PF02895 Signal transducing histidine kinase, homodimeric domain D5085_08715 PF00072 Response regulator receiver domain D5085_08715 PF01339 CheB methylesterase D5085_08720 PF01618 MotA/TolQ/ExbB proton channel family D5085_08725 PF00691 OmpA family D5085_08725 PF13677 Membrane MotB of proton-channel complex MotA/MotB D5085_08730 PF13614 AAA domain D5085_08740 PF01584 CheW-like domain D5085_08755 PF05175 Methyltransferase small domain D5085_08765 PF04055 Radical SAM superfamily D5085_08765 PF06969 HemN C-terminal domain D5085_08770 PF07694 5TMR of 5TMR-LYT D5085_08770 PF06580 Histidine kinase D5085_08775 PF02049 Flagellar hook-basal body complex protein FliE D5085_08780 PF01514 Secretory protein of YscJ/FliF family D5085_08780 PF08345 Flagellar M-ring protein C-terminal D5085_08785 PF14842 FliG N-terminal domain D5085_08785 PF01706 FliG C-terminal domain D5085_08785 PF14841 FliG middle domain D5085_08795 PF18269 T3SS EscN ATPase C-terminal domain D5085_08795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5085_08805 PF02120 Flagellar hook-length control protein FliK D5085_08810 PF02754 Cysteine-rich domain D5085_08810 PF13183 4Fe-4S dicluster domain D5085_08815 PF01551 Peptidase family M23 D5085_08820 PF01676 Metalloenzyme superfamily D5085_08820 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D5085_08825 PF01022 Bacterial regulatory protein, arsR family D5085_08830 PF00581 Rhodanese-like domain D5085_08835 PF00462 Glutaredoxin D5085_08840 PF00085 Thioredoxin D5085_08845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5085_08855 PF01327 Polypeptide deformylase D5085_08875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5085_08875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5085_08875 PF00205 Thiamine pyrophosphate enzyme, central domain D5085_08885 PF05173 Dihydrodipicolinate reductase, C-terminus D5085_08885 PF01113 Dihydrodipicolinate reductase, N-terminus D5085_08895 PF01208 Uroporphyrinogen decarboxylase (URO-D) D5085_08900 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5085_08900 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D5085_08905 PF00310 Glutamine amidotransferases class-II D5085_08905 PF01645 Conserved region in glutamate synthase D5085_08905 PF01493 GXGXG motif D5085_08905 PF04898 Glutamate synthase central domain D5085_08910 PF01740 STAS domain D5085_08910 PF00916 Sulfate permease family D5085_08930 PF07728 AAA domain (dynein-related subfamily) D5085_08930 PF08406 CbbQ/NirQ/NorQ C-terminal D5085_08940 PF00101 Ribulose bisphosphate carboxylase, small chain D5085_08945 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain D5085_08945 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain D5085_08950 PF02954 Bacterial regulatory protein, Fis family D5085_08950 PF00158 Sigma-54 interaction domain D5085_08950 PF00072 Response regulator receiver domain D5085_08955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_08955 PF00989 PAS fold D5085_08955 PF00512 His Kinase A (phospho-acceptor) domain D5085_08960 PF03600 Citrate transporter D5085_08960 PF02080 TrkA-C domain D5085_08965 PF03600 Citrate transporter D5085_08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5085_08970 PF03466 LysR substrate binding domain D5085_09020 PF00101 Ribulose bisphosphate carboxylase, small chain D5085_09025 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain D5085_09025 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain D5085_09030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_09030 PF17200 Single Cache domain 2 D5085_09030 PF00672 HAMP domain D5085_09035 PF00005 ABC transporter D5085_09045 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) D5085_09090 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D5085_09090 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D5085_09095 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D5085_09100 PF00374 Nickel-dependent hydrogenase D5085_09105 PF00953 Glycosyl transferase family 4 D5085_09110 PF00924 Mechanosensitive ion channel D5085_09110 PF12795 Mechanosensitive ion channel porin domain D5085_09110 PF12794 Mechanosensitive ion channel inner membrane domain 1 D5085_09125 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5085_09130 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D5085_09135 PF00578 AhpC/TSA family D5085_09135 PF10417 C-terminal domain of 1-Cys peroxiredoxin D5085_09140 PF03976 Polyphosphate kinase 2 (PPK2) D5085_09145 PF00672 HAMP domain D5085_09145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_09155 PF12729 Four helix bundle sensory module for signal transduction D5085_09155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_09155 PF00672 HAMP domain D5085_09160 PF00664 ABC transporter transmembrane region D5085_09160 PF03412 Peptidase C39 family D5085_09160 PF00005 ABC transporter D5085_09165 PF04055 Radical SAM superfamily D5085_09165 PF06969 HemN C-terminal domain D5085_09175 PF17764 3′ DNA-binding domain (3′BD) D5085_09175 PF18074 Primosomal protein N C-terminal domain D5085_09175 PF00271 Helicase conserved C-terminal domain D5085_09175 PF00270 DEAD/DEAH box helicase D5085_09175 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D5085_09180 PF00149 Calcineurin-like phosphoesterase D5085_09185 PF00072 Response regulator receiver domain D5085_09185 PF00486 Transcriptional regulatory protein, C terminal D5085_09190 PF09190 DALR domain D5085_09190 PF01406 tRNA synthetases class I (C) catalytic domain D5085_09195 PF01739 CheR methyltransferase, SAM binding domain D5085_09195 PF03705 CheR methyltransferase, all-alpha domain D5085_09200 PF01584 CheW-like domain D5085_09200 PF00072 Response regulator receiver domain D5085_09225 PF02508 Rnf-Nqr subunit, membrane protein D5085_09230 PF04205 FMN-binding domain D5085_09235 PF03116 NQR2, RnfD, RnfE family D5085_09240 PF12838 4Fe-4S dicluster domain D5085_09240 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D5085_09240 PF10531 SLBB domain D5085_09240 PF13375 RnfC Barrel sandwich hybrid domain D5085_09245 PF04060 Putative Fe-S cluster D5085_09250 PF02508 Rnf-Nqr subunit, membrane protein D5085_09255 PF00460 Flagella basal body rod protein D5085_09255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5085_09260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5085_09260 PF00460 Flagella basal body rod protein D5085_09260 PF07559 Flagellar basal body protein FlaE D5085_09265 PF03963 Flagellar hook capping protein - N-terminal region D5085_09270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5085_09270 PF00460 Flagella basal body rod protein D5085_09275 PF00460 Flagella basal body rod protein D5085_09280 PF01794 Ferric reductase like transmembrane component D5085_09285 PF01435 Peptidase family M48 D5085_09285 PF07720 Tetratricopeptide repeat D5085_09290 PF00005 ABC transporter D5085_09290 PF12848 ABC transporter D5085_09300 PF00072 Response regulator receiver domain D5085_09315 PF08335 GlnD PII-uridylyltransferase D5085_09315 PF03710 Glutamate-ammonia ligase adenylyltransferase D5085_09325 PF02581 Thiamine monophosphate synthase D5085_09330 PF00202 Aminotransferase class-III D5085_09335 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D5085_09335 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D5085_09350 PF00999 Sodium/hydrogen exchanger family D5085_09350 PF02254 TrkA-N domain D5085_09360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_09360 PF02743 Cache domain D5085_09360 PF00672 HAMP domain D5085_09365 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF D5085_09365 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF D5085_09365 PF01189 16S rRNA methyltransferase RsmB/F D5085_09380 PF00933 Glycosyl hydrolase family 3 N terminal domain D5085_09390 PF01048 Phosphorylase superfamily D5085_09400 PF00119 ATP synthase A chain D5085_09405 PF00137 ATP synthase subunit C D5085_09410 PF00430 ATP synthase B/B' CF(0) D5085_09415 PF00213 ATP synthase delta (OSCP) subunit D5085_09420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5085_09420 PF00306 ATP synthase alpha/beta chain, C terminal domain D5085_09420 PF02874 ATP synthase alpha/beta family, beta-barrel domain D5085_09425 PF00231 ATP synthase D5085_09430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5085_09430 PF02874 ATP synthase alpha/beta family, beta-barrel domain D5085_09435 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D5085_09435 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D5085_09440 PF04186 FxsA cytoplasmic membrane protein D5085_09445 PF00166 Chaperonin 10 Kd subunit D5085_09450 PF00118 TCP-1/cpn60 chaperonin family D5085_09465 PF03781 Sulfatase-modifying factor enzyme 1 D5085_09515 PF05567 Neisseria PilC beta-propeller domain D5085_09535 PF02789 Cytosol aminopeptidase family, N-terminal domain D5085_09535 PF00883 Cytosol aminopeptidase family, catalytic domain D5085_09540 PF03739 Lipopolysaccharide export system permease LptF/LptG D5085_09545 PF03739 Lipopolysaccharide export system permease LptF/LptG D5085_09550 PF12832 MFS_1 like family D5085_09555 PF03150 Di-haem cytochrome c peroxidase D5085_09585 PF12704 MacB-like periplasmic core domain D5085_09585 PF00005 ABC transporter D5085_09585 PF02687 FtsX-like permease family D5085_09600 PF01026 TatD related DNase D5085_09610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5085_09610 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5085_09615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5085_09615 PF07498 Rho termination factor, N-terminal domain D5085_09615 PF07497 Rho termination factor, RNA-binding domain D5085_09620 PF00085 Thioredoxin D5085_09625 PF00270 DEAD/DEAH box helicase D5085_09625 PF00271 Helicase conserved C-terminal domain D5085_09630 PF17151 Periplasmic sensor domain D5085_09630 PF00990 Diguanylate cyclase, GGDEF domain D5085_09635 PF13175 AAA ATPase domain D5085_09645 PF00034 Cytochrome c D5085_09650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5085_09700 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system D5085_09740 PF03781 Sulfatase-modifying factor enzyme 1 D5085_09740 PF00069 Protein kinase domain D5085_09850 PF01850 PIN domain D5085_09870 PF08245 Mur ligase middle domain D5085_09870 PF01225 Mur ligase family, catalytic domain D5085_09870 PF02875 Mur ligase family, glutamate ligase domain D5085_09875 PF02441 Flavoprotein D5085_09885 PF00364 Biotin-requiring enzyme D5085_09885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D5085_09885 PF02817 e3 binding domain D5085_09890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5085_09890 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5085_09895 PF02203 Tar ligand binding domain homologue D5085_09895 PF00672 HAMP domain D5085_09895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_09900 PF00989 PAS fold D5085_09910 PF00990 Diguanylate cyclase, GGDEF domain D5085_09915 PF01323 DSBA-like thioredoxin domain D5085_09920 PF00342 Phosphoglucose isomerase D5085_09925 PF05191 Adenylate kinase, active site lid D5085_09930 PF00762 Ferrochelatase D5085_09935 PF13307 Helicase C-terminal domain D5085_09935 PF06733 DEAD_2 D5085_09945 PF00929 Exonuclease D5085_09950 PF00075 RNase H D5085_09955 PF08241 Methyltransferase domain D5085_09960 PF00753 Metallo-beta-lactamase superfamily D5085_09960 PF16123 Hydroxyacylglutathione hydrolase C-terminus D5085_09965 PF01476 LysM domain D5085_09965 PF01464 Transglycosylase SLT domain D5085_09975 PF00488 MutS domain V D5085_09975 PF05190 MutS family domain IV D5085_09975 PF05192 MutS domain III D5085_09975 PF05188 MutS domain II D5085_09975 PF01624 MutS domain I D5085_09980 PF00248 Aldo/keto reductase family D5085_09990 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_09990 PF00672 HAMP domain D5085_09990 PF00512 His Kinase A (phospho-acceptor) domain D5085_09990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_09990 PF01627 Hpt domain D5085_09990 PF00072 Response regulator receiver domain D5085_09995 PF07715 TonB-dependent Receptor Plug Domain D5085_09995 PF00593 TonB dependent receptor D5085_10005 PF00512 His Kinase A (phospho-acceptor) domain D5085_10005 PF00672 HAMP domain D5085_10005 PF01627 Hpt domain D5085_10005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_10005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_10005 PF00072 Response regulator receiver domain D5085_10010 PF00990 Diguanylate cyclase, GGDEF domain D5085_10010 PF00072 Response regulator receiver domain D5085_10015 PF03023 Lipid II flippase MurJ D5085_10020 PF00293 NUDIX domain D5085_10025 PF00391 PEP-utilising enzyme, mobile domain D5085_10025 PF02896 PEP-utilising enzyme, TIM barrel domain D5085_10025 PF05524 PEP-utilising enzyme, N-terminal D5085_10025 PF01590 GAF domain D5085_10030 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5085_10035 PF00248 Aldo/keto reductase family D5085_10040 PF00294 pfkB family carbohydrate kinase D5085_10040 PF01467 Cytidylyltransferase-like D5085_10050 PF01063 Amino-transferase class IV D5085_10060 PF03550 Outer membrane lipoprotein LolB D5085_10065 PF08544 GHMP kinases C terminal D5085_10065 PF00288 GHMP kinases N terminal domain D5085_10075 PF14572 Phosphoribosyl synthetase-associated domain D5085_10075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D5085_10080 PF14693 Ribosomal protein TL5, C-terminal domain D5085_10080 PF01386 Ribosomal L25p family D5085_10085 PF01195 Peptidyl-tRNA hydrolase D5085_10090 PF01926 50S ribosome-binding GTPase D5085_10090 PF06071 Protein of unknown function (DUF933) D5085_10095 PF01814 Hemerythrin HHE cation binding domain D5085_10115 PF03781 Sulfatase-modifying factor enzyme 1 D5085_10135 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D5085_10140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D5085_10145 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D5085_10150 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D5085_10160 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D5085_10160 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D5085_10160 PF10531 SLBB domain D5085_10165 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D5085_10165 PF00384 Molybdopterin oxidoreductase D5085_10165 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal D5085_10170 PF00146 NADH dehydrogenase D5085_10175 PF12838 4Fe-4S dicluster domain D5085_10180 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D5085_10185 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D5085_10190 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D5085_10190 PF00361 Proton-conducting membrane transporter D5085_10195 PF00361 Proton-conducting membrane transporter D5085_10195 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus D5085_10200 PF00361 Proton-conducting membrane transporter D5085_10205 PF01578 Cytochrome C assembly protein D5085_10215 PF03100 CcmE D5085_10220 PF01578 Cytochrome C assembly protein D5085_10220 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D5085_10225 PF08534 Redoxin D5085_10230 PF03918 Cytochrome C biogenesis protein D5085_10240 PF08206 Ribonuclease B OB domain D5085_10240 PF08461 Ribonuclease R winged-helix domain D5085_10240 PF00773 RNB domain D5085_10240 PF00575 S1 RNA binding domain D5085_10240 PF17876 Cold shock domain D5085_10245 PF00588 SpoU rRNA Methylase family D5085_10245 PF08032 RNA 2'-O ribose methyltransferase substrate binding D5085_10250 PF01625 Peptide methionine sulfoxide reductase D5085_10275 PF01740 STAS domain D5085_10275 PF00916 Sulfate permease family D5085_10280 PF13416 Bacterial extracellular solute-binding protein D5085_10370 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D5085_10370 PF00753 Metallo-beta-lactamase superfamily D5085_10370 PF10996 Beta-Casp domain D5085_10410 PF16363 GDP-mannose 4,6 dehydratase D5085_10420 PF01370 NAD dependent epimerase/dehydratase family D5085_10500 PF02463 RecF/RecN/SMC N terminal domain D5085_10545 PF13749 Putative ATP-dependent DNA helicase recG C-terminal D5085_10545 PF17191 RecG wedge domain D5085_10545 PF00270 DEAD/DEAH box helicase D5085_10655 PF01370 NAD dependent epimerase/dehydratase family D5085_10700 PF13439 Glycosyltransferase Family 4 D5085_10700 PF00534 Glycosyl transferases group 1 D5085_10705 PF16363 GDP-mannose 4,6 dehydratase D5085_10735 PF16363 GDP-mannose 4,6 dehydratase D5085_10745 PF01370 NAD dependent epimerase/dehydratase family D5085_10815 PF02463 RecF/RecN/SMC N terminal domain D5085_10830 PF00535 Glycosyl transferase family 2 D5085_10835 PF00535 Glycosyl transferase family 2 D5085_10880 PF05973 Phage derived protein Gp49-like (DUF891) D5085_10885 PF01381 Helix-turn-helix D5085_10915 PF00534 Glycosyl transferases group 1 D5085_10915 PF13439 Glycosyltransferase Family 4 D5085_10920 PF16363 GDP-mannose 4,6 dehydratase D5085_10925 PF00535 Glycosyl transferase family 2 D5085_10940 PF00437 Type II/IV secretion system protein D5085_10945 PF00482 Type II secretion system (T2SS), protein F D5085_10950 PF08334 Type II secretion system (T2SS), protein G D5085_10950 PF07963 Prokaryotic N-terminal methylation motif D5085_10955 PF07963 Prokaryotic N-terminal methylation motif D5085_10955 PF00114 Pilin (bacterial filament) D5085_10990 PF03958 Bacterial type II/III secretion system short domain D5085_10990 PF00263 Bacterial type II and III secretion system protein D5085_11025 PF03062 MBOAT, membrane-bound O-acyltransferase family D5085_11055 PF14667 Polysaccharide biosynthesis C-terminal domain D5085_11055 PF01943 Polysaccharide biosynthesis protein D5085_11065 PF01370 NAD dependent epimerase/dehydratase family D5085_11075 PF16363 GDP-mannose 4,6 dehydratase D5085_11090 PF08421 Putative zinc binding domain D5085_11090 PF08484 C-methyltransferase C-terminal domain D5085_11155 PF02801 Beta-ketoacyl synthase, C-terminal domain D5085_11155 PF00202 Aminotransferase class-III D5085_11155 PF00550 Phosphopantetheine attachment site D5085_11155 PF00501 AMP-binding enzyme D5085_11155 PF13193 AMP-binding enzyme C-terminal domain D5085_11155 PF00668 Condensation domain D5085_11155 PF00109 Beta-ketoacyl synthase, N-terminal domain D5085_11155 PF16197 Ketoacyl-synthetase C-terminal extension D5085_11165 PF00668 Condensation domain D5085_11165 PF16197 Ketoacyl-synthetase C-terminal extension D5085_11165 PF00550 Phosphopantetheine attachment site D5085_11165 PF00698 Acyl transferase domain D5085_11165 PF02801 Beta-ketoacyl synthase, C-terminal domain D5085_11165 PF00109 Beta-ketoacyl synthase, N-terminal domain D5085_11170 PF03279 Bacterial lipid A biosynthesis acyltransferase D5085_11175 PF00535 Glycosyl transferase family 2 D5085_11180 PF00072 Response regulator receiver domain D5085_11180 PF00990 Diguanylate cyclase, GGDEF domain D5085_11185 PF18075 FtsX extracellular domain D5085_11190 PF00005 ABC transporter D5085_11200 PF02576 RimP N-terminal domain D5085_11200 PF17384 RimP C-terminal SH3 domain D5085_11205 PF13184 NusA-like KH domain D5085_11205 PF08529 NusA N-terminal domain D5085_11210 PF11987 Translation-initiation factor 2 D5085_11210 PF04760 Translation initiation factor IF-2, N-terminal region D5085_11210 PF08364 Bacterial translation initiation factor IF-2 associated region D5085_11210 PF00009 Elongation factor Tu GTP binding domain D5085_11215 PF02033 Ribosome-binding factor A D5085_11220 PF09157 Pseudouridine synthase II TruB, C-terminal D5085_11220 PF01509 TruB family pseudouridylate synthase (N terminal domain) D5085_11220 PF16198 tRNA pseudouridylate synthase B C-terminal domain D5085_11225 PF00312 Ribosomal protein S15 D5085_11230 PF01138 3' exoribonuclease family, domain 1 D5085_11230 PF00013 KH domain D5085_11230 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D5085_11230 PF03725 3' exoribonuclease family, domain 2 D5085_11230 PF00575 S1 RNA binding domain D5085_11235 PF02401 LytB protein D5085_11265 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5085_11275 PF01008 Initiation factor 2 subunit family D5085_11285 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D5085_11285 PF11940 Domain of unknown function (DUF3458) Ig-like fold D5085_11285 PF01433 Peptidase family M1 domain D5085_11300 PF01510 N-acetylmuramoyl-L-alanine amidase D5085_11305 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D5085_11305 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D5085_11310 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D5085_11310 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D5085_11310 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D5085_11315 PF01926 50S ribosome-binding GTPase D5085_11320 PF07720 Tetratricopeptide repeat D5085_11320 PF01435 Peptidase family M48 D5085_11325 PF01649 Ribosomal protein S20 D5085_11340 PF12170 DNA polymerase III tau subunit V interacting with alpha D5085_11340 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D5085_11340 PF12169 DNA polymerase III subunits gamma and tau domain III D5085_11345 PF16193 AAA C-terminal domain D5085_11345 PF00004 ATPase family associated with various cellular activities (AAA) D5085_11345 PF12002 MgsA AAA+ ATPase C terminal D5085_11350 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D5085_11355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D5085_11355 PF02403 Seryl-tRNA synthetase N-terminal domain D5085_11360 PF00550 Phosphopantetheine attachment site D5085_11365 PF00109 Beta-ketoacyl synthase, N-terminal domain D5085_11365 PF02801 Beta-ketoacyl synthase, C-terminal domain D5085_11370 PF01063 Amino-transferase class IV D5085_11375 PF02618 YceG-like family D5085_11380 PF00672 HAMP domain D5085_11380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_11380 PF00512 His Kinase A (phospho-acceptor) domain D5085_11380 PF01627 Hpt domain D5085_11380 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_11380 PF00072 Response regulator receiver domain D5085_11390 PF07726 ATPase family associated with various cellular activities (AAA) D5085_11390 PF17863 AAA lid domain D5085_11395 PF02424 ApbE family D5085_11400 PF10576 Iron-sulfur binding domain of endonuclease III D5085_11400 PF00633 Helix-hairpin-helix motif D5085_11400 PF14815 NUDIX domain D5085_11400 PF00730 HhH-GPD superfamily base excision DNA repair protein D5085_11405 PF04362 Bacterial Fe(2+) trafficking D5085_11440 PF03099 Biotin/lipoate A/B protein ligase family D5085_11440 PF02237 Biotin protein ligase C terminal domain D5085_11440 PF08279 HTH domain D5085_11445 PF03309 Type III pantothenate kinase D5085_11455 PF02574 Homocysteine S-methyltransferase D5085_11455 PF00809 Pterin binding enzyme D5085_11455 PF02965 Vitamin B12 dependent methionine synthase, activation domain D5085_11455 PF02310 B12 binding domain D5085_11455 PF02607 B12 binding domain D5085_11465 PF03880 DbpA RNA binding domain D5085_11465 PF00270 DEAD/DEAH box helicase D5085_11465 PF00271 Helicase conserved C-terminal domain D5085_11470 PF01339 CheB methylesterase D5085_11470 PF00072 Response regulator receiver domain D5085_11475 PF03705 CheR methyltransferase, all-alpha domain D5085_11475 PF01739 CheR methyltransferase, SAM binding domain D5085_11480 PF08402 TOBE domain D5085_11480 PF00005 ABC transporter D5085_11485 PF00528 Binding-protein-dependent transport system inner membrane component D5085_11500 PF00625 Guanylate kinase D5085_11510 PF01171 PP-loop family D5085_11530 PF12633 Adenylate cyclase NT domain D5085_11530 PF01295 Adenylate cyclase, class-I D5085_11540 PF00512 His Kinase A (phospho-acceptor) domain D5085_11540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_11555 PF00158 Sigma-54 interaction domain D5085_11555 PF00072 Response regulator receiver domain D5085_11555 PF02954 Bacterial regulatory protein, Fis family D5085_11560 PF00459 Inositol monophosphatase family D5085_11565 PF00588 SpoU rRNA Methylase family D5085_11570 PF00132 Bacterial transferase hexapeptide (six repeats) D5085_11575 PF02082 Transcriptional regulator D5085_11580 PF00266 Aminotransferase class-V D5085_11585 PF00266 Aminotransferase class-V D5085_11590 PF01592 NifU-like N terminal domain D5085_11595 PF01521 Iron-sulphur cluster biosynthesis D5085_11600 PF07743 HSCB C-terminal oligomerisation domain D5085_11605 PF00012 Hsp70 protein D5085_11610 PF00111 2Fe-2S iron-sulfur cluster binding domain D5085_11615 PF04384 Iron-sulphur cluster assembly D5085_11620 PF10531 SLBB domain D5085_11625 PF01197 Ribosomal protein L31 D5085_11645 PF01266 FAD dependent oxidoreductase D5085_11655 PF00072 Response regulator receiver domain D5085_11660 PF00072 Response regulator receiver domain D5085_11665 PF01584 CheW-like domain D5085_11670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_11670 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D5085_11675 PF07194 P2 response regulator binding domain D5085_11675 PF01584 CheW-like domain D5085_11675 PF01627 Hpt domain D5085_11675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_11675 PF02895 Signal transducing histidine kinase, homodimeric domain D5085_11690 PF01416 tRNA pseudouridine synthase D5085_11695 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D5085_11700 PF00291 Pyridoxal-phosphate dependent enzyme D5085_11705 PF00290 Tryptophan synthase alpha chain D5085_11710 PF17848 Acetyl-coA carboxylase zinc finger domain D5085_11710 PF01039 Carboxyl transferase domain D5085_11715 PF02875 Mur ligase family, glutamate ligase domain D5085_11715 PF08245 Mur ligase middle domain D5085_11725 PF02674 Colicin V production protein D5085_11730 PF00156 Phosphoribosyl transferase domain D5085_11740 PF05166 YcgL domain D5085_11745 PF02872 5'-nucleotidase, C-terminal domain D5085_11745 PF00149 Calcineurin-like phosphoesterase D5085_11765 PF04358 DsrC like protein D5085_11770 PF10672 S-adenosylmethionine-dependent methyltransferase D5085_11770 PF02926 THUMP domain D5085_11770 PF01170 Putative RNA methylase family UPF0020 D5085_11800 PF02617 ATP-dependent Clp protease adaptor protein ClpS D5085_11815 PF06667 Phage shock protein B D5085_11825 PF01790 Prolipoprotein diacylglyceryl transferase D5085_11830 PF00303 Thymidylate synthase D5085_11850 PF00186 Dihydrofolate reductase D5085_11855 PF01894 Uncharacterised protein family UPF0047 D5085_11870 PF01641 SelR domain D5085_11875 PF00115 Cytochrome C and Quinol oxidase polypeptide I D5085_11890 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D5085_11890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5085_11895 PF12801 4Fe-4S binding domain D5085_11895 PF13746 4Fe-4S dicluster domain D5085_11895 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D5085_11905 PF00403 Heavy-metal-associated domain D5085_11910 PF02684 Lipid-A-disaccharide synthetase D5085_11930 PF02743 Cache domain D5085_11930 PF00672 HAMP domain D5085_11930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_11935 PF01584 CheW-like domain D5085_11940 PF00072 Response regulator receiver domain D5085_11940 PF01339 CheB methylesterase D5085_11950 PF03705 CheR methyltransferase, all-alpha domain D5085_11950 PF01739 CheR methyltransferase, SAM binding domain D5085_11955 PF00072 Response regulator receiver domain D5085_11960 PF01627 Hpt domain D5085_11960 PF07194 P2 response regulator binding domain D5085_11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_11960 PF02895 Signal transducing histidine kinase, homodimeric domain D5085_11960 PF07194 P2 response regulator binding domain D5085_11960 PF01584 CheW-like domain D5085_11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_11960 PF02895 Signal transducing histidine kinase, homodimeric domain D5085_11960 PF01584 CheW-like domain D5085_11960 PF01627 Hpt domain D5085_11970 PF13614 AAA domain D5085_11975 PF00072 Response regulator receiver domain D5085_11980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_11980 PF00672 HAMP domain D5085_11990 PF13581 Histidine kinase-like ATPase domain D5085_11995 PF13581 Histidine kinase-like ATPase domain D5085_12000 PF01740 STAS domain D5085_12005 PF01740 STAS domain D5085_12005 PF08678 Rsbr N terminal D5085_12010 PF00072 Response regulator receiver domain D5085_12010 PF08448 PAS fold D5085_12010 PF00512 His Kinase A (phospho-acceptor) domain D5085_12010 PF13188 PAS domain D5085_12010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_12015 PF00486 Transcriptional regulatory protein, C terminal D5085_12015 PF00072 Response regulator receiver domain D5085_12020 PF00563 EAL domain D5085_12020 PF00990 Diguanylate cyclase, GGDEF domain D5085_12020 PF03707 Bacterial signalling protein N terminal repeat D5085_12025 PF01584 CheW-like domain D5085_12030 PF00072 Response regulator receiver domain D5085_12030 PF00512 His Kinase A (phospho-acceptor) domain D5085_12030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_12030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_12030 PF00672 HAMP domain D5085_12030 PF01627 Hpt domain D5085_12040 PF01627 Hpt domain D5085_12040 PF00512 His Kinase A (phospho-acceptor) domain D5085_12040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_12040 PF17149 Periplasmic sensor domain found in signal transduction proteins D5085_12040 PF00072 Response regulator receiver domain D5085_12040 PF00672 HAMP domain D5085_12045 PF00145 C-5 cytosine-specific DNA methylase D5085_12210 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system D5085_12225 PF00929 Exonuclease D5085_12225 PF02811 PHP domain D5085_12225 PF14579 Helix-hairpin-helix motif D5085_12225 PF07733 Bacterial DNA polymerase III alpha NTPase domain D5085_12225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D5085_12240 PF00474 Sodium:solute symporter family D5085_12250 PF01209 ubiE/COQ5 methyltransferase family D5085_12270 PF01841 Transglutaminase-like superfamily D5085_12270 PF08379 Bacterial transglutaminase-like N-terminal region D5085_12275 PF04168 A predicted alpha-helical domain with a conserved ER motif. D5085_12275 PF14403 Circularly permuted ATP-grasp type 2 D5085_12290 PF02666 Phosphatidylserine decarboxylase D5085_12295 PF00293 NUDIX domain D5085_12300 PF18073 Rubredoxin metal binding domain D5085_12305 PF00909 Ammonium Transporter Family D5085_12305 PF00672 HAMP domain D5085_12310 PF00486 Transcriptional regulatory protein, C terminal D5085_12310 PF00072 Response regulator receiver domain D5085_12315 PF00072 Response regulator receiver domain D5085_12315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_12315 PF00672 HAMP domain D5085_12315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_12315 PF01627 Hpt domain D5085_12315 PF00512 His Kinase A (phospho-acceptor) domain D5085_12325 PF00072 Response regulator receiver domain D5085_12325 PF08279 HTH domain D5085_12330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_12330 PF00072 Response regulator receiver domain D5085_12330 PF01627 Hpt domain D5085_12330 PF00512 His Kinase A (phospho-acceptor) domain D5085_12330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_12330 PF00672 HAMP domain D5085_12335 PF18152 DAHP synthase ferredoxin-like domain D5085_12335 PF00793 DAHP synthetase I family D5085_12340 PF04333 MlaA lipoprotein D5085_12345 PF00873 AcrB/AcrD/AcrF family D5085_12360 PF01367 5'-3' exonuclease, C-terminal SAM fold D5085_12360 PF01612 3'-5' exonuclease D5085_12360 PF00476 DNA polymerase family A D5085_12360 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D5085_12365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_12365 PF00672 HAMP domain D5085_12375 PF01494 FAD binding domain D5085_12380 PF01494 FAD binding domain D5085_12385 PF00557 Metallopeptidase family M24 D5085_12385 PF05195 Aminopeptidase P, N-terminal domain D5085_12395 PF14245 Type IV pilin PilA D5085_12395 PF07963 Prokaryotic N-terminal methylation motif D5085_12420 PF03631 Virulence factor BrkB D5085_12430 PF00398 Ribosomal RNA adenine dimethylase D5085_12435 PF10431 C-terminal, D2-small domain, of ClpB protein D5085_12435 PF02861 Clp amino terminal domain, pathogenicity island component D5085_12435 PF00004 ATPase family associated with various cellular activities (AAA) D5085_12435 PF07724 AAA domain (Cdc48 subfamily) D5085_12435 PF17871 AAA lid domain D5085_12440 PF01176 Translation initiation factor 1A / IF-1 D5085_12445 PF07690 Major Facilitator Superfamily D5085_12450 PF03572 Peptidase family S41 D5085_12450 PF13180 PDZ domain D5085_12455 PF04748 Divergent polysaccharide deacetylase D5085_12465 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D5085_12465 PF03900 Porphobilinogen deaminase, C-terminal domain D5085_12470 PF02602 Uroporphyrinogen-III synthase HemD D5085_12545 PF00072 Response regulator receiver domain D5085_12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_12545 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_12545 PF00672 HAMP domain D5085_12545 PF00512 His Kinase A (phospho-acceptor) domain D5085_12545 PF01627 Hpt domain D5085_12550 PF00072 Response regulator receiver domain D5085_12555 PF01769 Divalent cation transporter D5085_12555 PF03448 MgtE intracellular N domain D5085_12555 PF00571 CBS domain D5085_12560 PF00990 Diguanylate cyclase, GGDEF domain D5085_12560 PF03707 Bacterial signalling protein N terminal repeat D5085_12560 PF00563 EAL domain D5085_12565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5085_12565 PF00460 Flagella basal body rod protein D5085_12570 PF02107 Flagellar L-ring protein D5085_12575 PF02119 Flagellar P-ring protein D5085_12580 PF10135 Rod binding protein D5085_12580 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D5085_12610 PF07726 ATPase family associated with various cellular activities (AAA) D5085_12610 PF17863 AAA lid domain D5085_12620 PF13559 Domain of unknown function (DUF4129) D5085_12620 PF01841 Transglutaminase-like superfamily D5085_12620 PF11992 Domain of unknown function (DUF3488) D5085_12625 PF03167 Uracil DNA glycosylase superfamily D5085_12630 PF08502 LeuA allosteric (dimerisation) domain D5085_12630 PF00682 HMGL-like D5085_12635 PF03350 Uncharacterized protein family, UPF0114 D5085_12640 PF00117 Glutamine amidotransferase class-I D5085_12640 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D5085_12645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5085_12645 PF02142 MGS-like domain D5085_12645 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D5085_12650 PF01272 Transcription elongation factor, GreA/GreB, C-term D5085_12650 PF03449 Transcription elongation factor, N-terminal D5085_12655 PF01985 CRS1 / YhbY (CRM) domain D5085_12660 PF01728 FtsJ-like methyltransferase D5085_12665 PF00004 ATPase family associated with various cellular activities (AAA) D5085_12665 PF17862 AAA+ lid domain D5085_12665 PF06480 FtsH Extracellular D5085_12665 PF01434 Peptidase family M41 D5085_12670 PF00809 Pterin binding enzyme D5085_12680 PF02653 Branched-chain amino acid transport system / permease component D5085_12690 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5085_12690 PF00005 ABC transporter D5085_12695 PF00005 ABC transporter D5085_12705 PF01774 UreD urease accessory protein D5085_12720 PF02814 UreE urease accessory protein, N-terminal domain D5085_12720 PF05194 UreE urease accessory protein, C-terminal domain D5085_12735 PF01730 UreF D5085_12765 PF00664 ABC transporter transmembrane region D5085_12765 PF00005 ABC transporter D5085_12795 PF02579 Dinitrogenase iron-molybdenum cofactor D5085_12795 PF04055 Radical SAM superfamily D5085_12800 PF12838 4Fe-4S dicluster domain D5085_12805 PF00258 Flavodoxin D5085_12805 PF00753 Metallo-beta-lactamase superfamily D5085_12810 PF00111 2Fe-2S iron-sulfur cluster binding domain D5085_12815 PF00111 2Fe-2S iron-sulfur cluster binding domain D5085_12820 PF04891 NifQ D5085_12840 PF09545 AccI restriction endonuclease D5085_12845 PF18766 SWI2/SNF2 ATPase D5085_12845 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D5085_12845 PF11867 Domain of unknown function (DUF3387) D5085_12850 PF12728 Helix-turn-helix domain D5085_12850 PF02661 Fic/DOC family D5085_12855 PF01420 Type I restriction modification DNA specificity domain D5085_12865 PF02384 N-6 DNA Methylase D5085_12905 PF01464 Transglycosylase SLT domain D5085_12905 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5085_12915 PF00580 UvrD/REP helicase N-terminal domain D5085_12915 PF13361 UvrD-like helicase C-terminal domain D5085_12920 PF00909 Ammonium Transporter Family D5085_12925 PF00543 Nitrogen regulatory protein P-II D5085_12930 PF00730 HhH-GPD superfamily base excision DNA repair protein D5085_12930 PF00633 Helix-hairpin-helix motif D5085_12930 PF10576 Iron-sulfur binding domain of endonuclease III D5085_12940 PF01250 Ribosomal protein S6 D5085_12945 PF01084 Ribosomal protein S18 D5085_12955 PF03948 Ribosomal protein L9, C-terminal domain D5085_12955 PF01281 Ribosomal protein L9, N-terminal domain D5085_12960 PF01668 SmpB protein D5085_12965 PF00772 DnaB-like helicase N terminal domain D5085_12965 PF03796 DnaB-like helicase C terminal domain D5085_12970 PF01168 Alanine racemase, N-terminal domain D5085_12970 PF00842 Alanine racemase, C-terminal domain D5085_12980 PF04403 Paraquat-inducible protein A D5085_12985 PF02470 MlaD protein D5085_12995 PF00563 EAL domain D5085_12995 PF08668 HDOD domain D5085_13000 PF17151 Periplasmic sensor domain D5085_13000 PF00990 Diguanylate cyclase, GGDEF domain D5085_13005 PF01295 Adenylate cyclase, class-I D5085_13005 PF12633 Adenylate cyclase NT domain D5085_13010 PF00512 His Kinase A (phospho-acceptor) domain D5085_13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_13010 PF00072 Response regulator receiver domain D5085_13010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_13010 PF00672 HAMP domain D5085_13010 PF01627 Hpt domain D5085_13015 PF00072 Response regulator receiver domain D5085_13020 PF00072 Response regulator receiver domain D5085_13025 PF00672 HAMP domain D5085_13025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_13025 PF00512 His Kinase A (phospho-acceptor) domain D5085_13025 PF01627 Hpt domain D5085_13025 PF00072 Response regulator receiver domain D5085_13025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_13030 PF00999 Sodium/hydrogen exchanger family D5085_13035 PF00582 Universal stress protein family D5085_13040 PF01571 Aminomethyltransferase folate-binding domain D5085_13045 PF03459 TOBE domain D5085_13045 PF00005 ABC transporter D5085_13065 PF04023 FeoA domain D5085_13065 PF07664 Ferrous iron transport protein B C terminus D5085_13065 PF17910 FeoB cytosolic helical domain D5085_13065 PF02421 Ferrous iron transport protein B D5085_13065 PF07670 Nucleoside recognition D5085_13095 PF01235 Sodium:alanine symporter family D5085_13100 PF00196 Bacterial regulatory proteins, luxR family D5085_13100 PF00072 Response regulator receiver domain D5085_13105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_13105 PF00672 HAMP domain D5085_13105 PF00512 His Kinase A (phospho-acceptor) domain D5085_13105 PF01627 Hpt domain D5085_13105 PF17149 Periplasmic sensor domain found in signal transduction proteins D5085_13105 PF00072 Response regulator receiver domain D5085_13125 PF01794 Ferric reductase like transmembrane component D5085_13135 PF01545 Cation efflux family D5085_13135 PF16916 Dimerisation domain of Zinc Transporter D5085_13140 PF13180 PDZ domain D5085_13160 PF16916 Dimerisation domain of Zinc Transporter D5085_13160 PF01545 Cation efflux family D5085_13195 PF00595 PDZ domain D5085_13230 PF00301 Rubredoxin D5085_13260 PF04545 Sigma-70, region 4 D5085_13260 PF04539 Sigma-70 region 3 D5085_13260 PF04542 Sigma-70 region 2 D5085_13270 PF01040 UbiA prenyltransferase family D5085_13295 PF04002 RadC-like JAB domain D5085_13300 PF01451 Low molecular weight phosphotyrosine protein phosphatase D5085_13315 PF02978 Signal peptide binding domain D5085_13315 PF02881 SRP54-type protein, helical bundle domain D5085_13315 PF00448 SRP54-type protein, GTPase domain D5085_13320 PF00753 Metallo-beta-lactamase superfamily D5085_13320 PF12706 Beta-lactamase superfamily domain D5085_13325 PF04445 Putative SAM-dependent methyltransferase D5085_13340 PF08411 Exonuclease C-terminal D5085_13340 PF00929 Exonuclease D5085_13365 PF02562 PhoH-like protein D5085_13370 PF02130 Uncharacterized protein family UPF0054 D5085_13375 PF00571 CBS domain D5085_13375 PF03471 Transporter associated domain D5085_13380 PF00795 Carbon-nitrogen hydrolase D5085_13385 PF00586 AIR synthase related protein, N-terminal domain D5085_13385 PF02769 AIR synthase related protein, C-terminal domain D5085_13390 PF17788 HypF Kae1-like domain D5085_13390 PF00708 Acylphosphatase D5085_13390 PF07503 HypF finger D5085_13390 PF01300 Telomere recombination D5085_13395 PF00117 Glutamine amidotransferase class-I D5085_13400 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D5085_13405 PF01455 HupF/HypC family D5085_13425 PF00580 UvrD/REP helicase N-terminal domain D5085_13425 PF13361 UvrD-like helicase C-terminal domain D5085_13435 PF01842 ACT domain D5085_13455 PF02310 B12 binding domain D5085_13455 PF13411 MerR HTH family regulatory protein D5085_13455 PF02607 B12 binding domain D5085_13460 PF13472 GDSL-like Lipase/Acylhydrolase family D5085_13465 PF00005 ABC transporter D5085_13475 PF12419 SNF2 Helicase protein D5085_13475 PF00271 Helicase conserved C-terminal domain D5085_13475 PF00176 SNF2 family N-terminal domain D5085_13480 PF00929 Exonuclease D5085_13485 PF01979 Amidohydrolase family D5085_13495 PF16658 Class II release factor RF3, C-terminal domain D5085_13495 PF03144 Elongation factor Tu domain 2 D5085_13495 PF00009 Elongation factor Tu GTP binding domain D5085_13535 PF01258 Prokaryotic dksA/traR C4-type zinc finger D5085_13545 PF00174 Oxidoreductase molybdopterin binding domain D5085_13550 PF03030 Inorganic H+ pyrophosphatase D5085_13555 PF00365 Phosphofructokinase D5085_13575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D5085_13580 PF00291 Pyridoxal-phosphate dependent enzyme D5085_13580 PF00585 C-terminal regulatory domain of Threonine dehydratase D5085_13585 PF01627 Hpt domain D5085_13585 PF00512 His Kinase A (phospho-acceptor) domain D5085_13585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_13585 PF00672 HAMP domain D5085_13585 PF00072 Response regulator receiver domain D5085_13585 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_13595 PF03702 Anhydro-N-acetylmuramic acid kinase D5085_13600 PF02445 Quinolinate synthetase A protein D5085_13605 PF02938 GAD domain D5085_13605 PF00152 tRNA synthetases class II (D, K and N) D5085_13605 PF01336 OB-fold nucleic acid binding domain D5085_13615 PF00106 short chain dehydrogenase D5085_13625 PF00072 Response regulator receiver domain D5085_13625 PF01584 CheW-like domain D5085_13635 PF01435 Peptidase family M48 D5085_13695 PF00211 Adenylate and Guanylate cyclase catalytic domain D5085_13700 PF08275 DNA primase catalytic core, N-terminal domain D5085_13700 PF13662 Toprim domain D5085_13700 PF08278 DNA primase DnaG DnaB-binding D5085_13700 PF10410 DnaB-helicase binding domain of primase D5085_13700 PF01807 CHC2 zinc finger D5085_13715 PF05164 Cell division protein ZapA D5085_13725 PF00325 Bacterial regulatory proteins, crp family D5085_13725 PF00027 Cyclic nucleotide-binding domain D5085_13735 PF02774 Semialdehyde dehydrogenase, dimerisation domain D5085_13735 PF01118 Semialdehyde dehydrogenase, NAD binding domain D5085_13750 PF01521 Iron-sulphur cluster biosynthesis D5085_13755 PF08331 Domain of unknown function (DUF1730) D5085_13760 PF13407 Periplasmic binding protein domain D5085_13765 PF00989 PAS fold D5085_13765 PF00072 Response regulator receiver domain D5085_13765 PF01627 Hpt domain D5085_13765 PF00512 His Kinase A (phospho-acceptor) domain D5085_13765 PF18415 Histidine kinase receptor ArcB trans-membrane domain D5085_13765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_13770 PF02630 SCO1/SenC D5085_13775 PF00196 Bacterial regulatory proteins, luxR family D5085_13775 PF00072 Response regulator receiver domain D5085_13780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_13780 PF07730 Histidine kinase D5085_13815 PF17782 DprA winged helix domain D5085_13815 PF02481 DNA recombination-mediator protein A D5085_13820 PF04361 Protein of unknown function (DUF494) D5085_13825 PF01131 DNA topoisomerase D5085_13825 PF01751 Toprim domain D5085_13825 PF13368 Topoisomerase C-terminal repeat D5085_13835 PF02649 Type I GTP cyclohydrolase folE2 D5085_13840 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D5085_13840 PF02779 Transketolase, pyrimidine binding domain D5085_13840 PF02780 Transketolase, C-terminal domain D5085_13845 PF00348 Polyprenyl synthetase D5085_13850 PF02609 Exonuclease VII small subunit D5085_13860 PF08003 Protein of unknown function (DUF1698) D5085_13865 PF13649 Methyltransferase domain D5085_13870 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit D5085_13870 PF13187 4Fe-4S dicluster domain D5085_13875 PF00890 FAD binding domain D5085_13885 PF01980 tRNA-methyltransferase O D5085_13885 PF18389 TrmO C-terminal domain D5085_13895 PF00990 Diguanylate cyclase, GGDEF domain D5085_13895 PF07694 5TMR of 5TMR-LYT D5085_13905 PF05496 Holliday junction DNA helicase RuvB P-loop domain D5085_13905 PF05491 RuvB C-terminal winged helix domain D5085_13905 PF17864 RuvB AAA lid domain D5085_13910 PF02190 ATP-dependent protease La (LON) substrate-binding domain D5085_13910 PF00004 ATPase family associated with various cellular activities (AAA) D5085_13910 PF05362 Lon protease (S16) C-terminal proteolytic domain D5085_13915 PF04055 Radical SAM superfamily D5085_13915 PF11842 Domain of unknown function (DUF3362) D5085_13915 PF08497 Radical SAM N-terminal D5085_13920 PF00563 EAL domain D5085_13920 PF08448 PAS fold D5085_13920 PF00990 Diguanylate cyclase, GGDEF domain D5085_13925 PF04055 Radical SAM superfamily D5085_13930 PF08207 Elongation factor P (EF-P) KOW-like domain D5085_13930 PF01132 Elongation factor P (EF-P) OB domain D5085_13930 PF09285 Elongation factor P, C-terminal D5085_13935 PF00152 tRNA synthetases class II (D, K and N) D5085_13940 PF04204 Homoserine O-succinyltransferase D5085_13955 PF01565 FAD binding domain D5085_13955 PF02913 FAD linked oxidases, C-terminal domain D5085_13960 PF13580 SIS domain D5085_13965 PF02021 Uncharacterised protein family UPF0102 D5085_13970 PF04348 LppC putative lipoprotein D5085_13975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5085_13980 PF00456 Transketolase, thiamine diphosphate binding domain D5085_13980 PF02780 Transketolase, C-terminal domain D5085_13980 PF02779 Transketolase, pyrimidine binding domain D5085_13985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D5085_13985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D5085_13990 PF00162 Phosphoglycerate kinase D5085_13995 PF02887 Pyruvate kinase, alpha/beta domain D5085_13995 PF00224 Pyruvate kinase, barrel domain D5085_14000 PF01116 Fructose-bisphosphate aldolase class-II D5085_14005 PF00580 UvrD/REP helicase N-terminal domain D5085_14005 PF13361 UvrD-like helicase C-terminal domain D5085_14025 PF01206 Sulfurtransferase TusA D5085_14025 PF00581 Rhodanese-like domain D5085_14050 PF01042 Endoribonuclease L-PSP D5085_14055 PF02824 TGS domain D5085_14055 PF13291 ACT domain D5085_14055 PF04607 Region found in RelA / SpoT proteins D5085_14060 PF01192 RNA polymerase Rpb6 D5085_14070 PF00330 Aconitase family (aconitate hydratase) D5085_14075 PF00694 Aconitase C-terminal domain D5085_14080 PF00180 Isocitrate/isopropylmalate dehydrogenase D5085_14085 PF02774 Semialdehyde dehydrogenase, dimerisation domain D5085_14085 PF01118 Semialdehyde dehydrogenase, NAD binding domain D5085_14090 PF00462 Glutaredoxin D5085_14090 PF08534 Redoxin D5085_14115 PF05717 IS66 Orf2 like protein D5085_14150 PF00005 ABC transporter D5085_14150 PF00664 ABC transporter transmembrane region D5085_14155 PF02472 Biopolymer transport protein ExbD/TolR D5085_14160 PF01618 MotA/TolQ/ExbB proton channel family D5085_14165 PF01476 LysM domain D5085_14165 PF01551 Peptidase family M23 D5085_14170 PF02601 Exonuclease VII, large subunit D5085_14170 PF13742 OB-fold nucleic acid binding domain D5085_14175 PF13458 Periplasmic binding protein D5085_14185 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D5085_14185 PF01580 FtsK/SpoIIIE family D5085_14185 PF09397 Ftsk gamma domain D5085_14185 PF17854 FtsK alpha domain D5085_14190 PF17200 Single Cache domain 2 D5085_14190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_14190 PF00672 HAMP domain D5085_14195 PF03548 Outer membrane lipoprotein carrier protein LolA D5085_14205 PF00072 Response regulator receiver domain D5085_14215 PF09967 VWA-like domain (DUF2201) D5085_14215 PF13203 Putative metallopeptidase domain D5085_14225 PF01112 Asparaginase D5085_14230 PF08659 KR domain D5085_14230 PF00109 Beta-ketoacyl synthase, N-terminal domain D5085_14230 PF16197 Ketoacyl-synthetase C-terminal extension D5085_14230 PF02801 Beta-ketoacyl synthase, C-terminal domain D5085_14230 PF00550 Phosphopantetheine attachment site D5085_14230 PF14765 Polyketide synthase dehydratase D5085_14230 PF00698 Acyl transferase domain D5085_14235 PF00550 Phosphopantetheine attachment site D5085_14235 PF08659 KR domain D5085_14235 PF02801 Beta-ketoacyl synthase, C-terminal domain D5085_14235 PF00698 Acyl transferase domain D5085_14235 PF08240 Alcohol dehydrogenase GroES-like domain D5085_14235 PF08990 Erythronolide synthase docking D5085_14235 PF00109 Beta-ketoacyl synthase, N-terminal domain D5085_14235 PF16197 Ketoacyl-synthetase C-terminal extension D5085_14235 PF14765 Polyketide synthase dehydratase D5085_14240 PF00579 tRNA synthetases class I (W and Y) D5085_14245 PF01266 FAD dependent oxidoreductase D5085_14250 PF01053 Cys/Met metabolism PLP-dependent enzyme D5085_14255 PF04305 Protein of unknown function (DUF455) D5085_14260 PF01292 Prokaryotic cytochrome b561 D5085_14270 PF01743 Poly A polymerase head domain D5085_14270 PF12626 Polymerase A arginine-rich C-terminus D5085_14270 PF12627 Probable RNA and SrmB- binding site of polymerase A D5085_14275 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D5085_14280 PF02548 Ketopantoate hydroxymethyltransferase D5085_14285 PF02569 Pantoate-beta-alanine ligase D5085_14290 PF02261 Aspartate decarboxylase D5085_14300 PF10609 NUBPL iron-transfer P-loop NTPase D5085_14305 PF00990 Diguanylate cyclase, GGDEF domain D5085_14305 PF08448 PAS fold D5085_14305 PF00563 EAL domain D5085_14310 PF09334 tRNA synthetases class I (M) D5085_14310 PF01588 Putative tRNA binding domain D5085_14330 PF00521 DNA gyrase/topoisomerase IV, subunit A D5085_14330 PF03989 DNA gyrase C-terminal domain, beta-propeller D5085_14335 PF09334 tRNA synthetases class I (M) D5085_14335 PF08264 Anticodon-binding domain of tRNA D5085_14335 PF13603 Leucyl-tRNA synthetase, Domain 2 D5085_14335 PF00133 tRNA synthetases class I (I, L, M and V) D5085_14340 PF00679 Elongation factor G C-terminus D5085_14340 PF06421 GTP-binding protein LepA C-terminus D5085_14340 PF03144 Elongation factor Tu domain 2 D5085_14340 PF00009 Elongation factor Tu GTP binding domain D5085_14345 PF10502 Signal peptidase, peptidase S26 D5085_14355 PF00035 Double-stranded RNA binding motif D5085_14355 PF14622 Ribonuclease-III-like D5085_14360 PF01926 50S ribosome-binding GTPase D5085_14360 PF07650 KH domain D5085_14365 PF02565 Recombination protein O C terminal D5085_14365 PF11967 Recombination protein O N terminal D5085_14370 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D5085_14375 PF08668 HDOD domain D5085_14380 PF00753 Metallo-beta-lactamase superfamily D5085_14380 PF12706 Beta-lactamase superfamily domain D5085_14385 PF02673 Bacitracin resistance protein BacA D5085_14395 PF04277 Oxaloacetate decarboxylase, gamma chain D5085_14400 PF00364 Biotin-requiring enzyme D5085_14400 PF02436 Conserved carboxylase domain D5085_14400 PF00682 HMGL-like D5085_14405 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D5085_14410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5085_14410 PF03466 LysR substrate binding domain D5085_14415 PF01027 Inhibitor of apoptosis-promoting Bax1 D5085_14420 PF02463 RecF/RecN/SMC N terminal domain D5085_14430 PF00672 HAMP domain D5085_14430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_14440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5085_14440 PF00289 Biotin carboxylase, N-terminal domain D5085_14440 PF02785 Biotin carboxylase C-terminal domain D5085_14445 PF00364 Biotin-requiring enzyme D5085_14450 PF01220 Dehydroquinase class II D5085_14455 PF00374 Nickel-dependent hydrogenase D5085_14475 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D5085_14475 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal D5085_14485 PF01750 Hydrogenase maturation protease D5085_14490 PF03625 Domain of unknown function DUF302 D5085_14500 PF00753 Metallo-beta-lactamase superfamily D5085_14500 PF03772 Competence protein D5085_14505 PF02599 Global regulator protein family D5085_14510 PF00920 Dehydratase family D5085_14515 PF11849 Domain of unknown function (DUF3369) D5085_14520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_14520 PF00512 His Kinase A (phospho-acceptor) domain D5085_14530 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D5085_14530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5085_14535 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D5085_14535 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D5085_14540 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D5085_14550 PF02597 ThiS family D5085_14555 PF04317 YcjX-like family, DUF463 D5085_14560 PF05128 Domain of unknown function (DUF697) D5085_14570 PF07687 Peptidase dimerisation domain D5085_14570 PF01546 Peptidase family M20/M25/M40 D5085_14575 PF00202 Aminotransferase class-III D5085_14580 PF00557 Metallopeptidase family M24 D5085_14580 PF01321 Creatinase/Prolidase N-terminal domain D5085_14585 PF00171 Aldehyde dehydrogenase family D5085_14590 PF00005 ABC transporter D5085_14605 PF00528 Binding-protein-dependent transport system inner membrane component D5085_14610 PF00528 Binding-protein-dependent transport system inner membrane component D5085_14615 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5085_14620 PF07885 Ion channel D5085_14620 PF00027 Cyclic nucleotide-binding domain D5085_14625 PF00294 pfkB family carbohydrate kinase D5085_14630 PF01219 Prokaryotic diacylglycerol kinase D5085_14635 PF00156 Phosphoribosyl transferase domain D5085_14640 PF01725 Ham1 family D5085_14645 PF03725 3' exoribonuclease family, domain 2 D5085_14645 PF01138 3' exoribonuclease family, domain 1 D5085_14655 PF00069 Protein kinase domain D5085_14655 PF08239 Bacterial SH3 domain D5085_14660 PF08340 Domain of unknown function (DUF1732) D5085_14660 PF03755 YicC-like family, N-terminal region D5085_14670 PF00749 tRNA synthetases class I (E and Q), catalytic domain D5085_14675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_14675 PF00512 His Kinase A (phospho-acceptor) domain D5085_14680 PF00158 Sigma-54 interaction domain D5085_14680 PF02954 Bacterial regulatory protein, Fis family D5085_14680 PF00072 Response regulator receiver domain D5085_14685 PF00291 Pyridoxal-phosphate dependent enzyme D5085_14690 PF03447 Homoserine dehydrogenase, NAD binding domain D5085_14690 PF01842 ACT domain D5085_14690 PF00742 Homoserine dehydrogenase D5085_14695 PF00155 Aminotransferase class I and II D5085_14715 PF00795 Carbon-nitrogen hydrolase D5085_14720 PF04751 Protein of unknown function (DUF615) D5085_14725 PF00381 PTS HPr component phosphorylation site D5085_14735 PF03668 P-loop ATPase protein family D5085_14740 PF02603 HPr Serine kinase N terminus D5085_14740 PF07475 HPr Serine kinase C-terminal domain D5085_14745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D5085_14750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D5085_14755 PF04552 Sigma-54, DNA binding domain D5085_14755 PF00309 Sigma-54 factor, Activator interacting domain (AID) D5085_14755 PF04963 Sigma-54 factor, core binding domain D5085_14760 PF00005 ABC transporter D5085_14760 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5085_14780 PF01842 ACT domain D5085_14780 PF08335 GlnD PII-uridylyltransferase D5085_14780 PF01966 HD domain D5085_14780 PF01909 Nucleotidyltransferase domain D5085_14785 PF00557 Metallopeptidase family M24 D5085_14790 PF00318 Ribosomal protein S2 D5085_14795 PF00889 Elongation factor TS D5085_14800 PF00696 Amino acid kinase family D5085_14805 PF01765 Ribosome recycling factor D5085_14810 PF01255 Putative undecaprenyl diphosphate synthase D5085_14820 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D5085_14820 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D5085_14820 PF13288 DXP reductoisomerase C-terminal domain D5085_14825 PF17820 PDZ domain D5085_14825 PF02163 Peptidase family M50 D5085_14825 PF13180 PDZ domain D5085_14830 PF07244 Surface antigen variable number repeat D5085_14830 PF01103 Surface antigen D5085_14840 PF00132 Bacterial transferase hexapeptide (six repeats) D5085_14840 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D5085_14850 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D5085_14850 PF00132 Bacterial transferase hexapeptide (six repeats) D5085_14860 PF17191 RecG wedge domain D5085_14860 PF00270 DEAD/DEAH box helicase D5085_14860 PF13749 Putative ATP-dependent DNA helicase recG C-terminal D5085_14865 PF00005 ABC transporter D5085_14870 PF00005 ABC transporter D5085_14870 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5085_14875 PF02653 Branched-chain amino acid transport system / permease component D5085_14875 PF11862 Domain of unknown function (DUF3382) D5085_14880 PF02653 Branched-chain amino acid transport system / permease component D5085_14885 PF01061 ABC-2 type transporter D5085_14890 PF00005 ABC transporter D5085_14895 PF05193 Peptidase M16 inactive domain D5085_14895 PF08367 Peptidase M16C associated D5085_14895 PF00675 Insulinase (Peptidase family M16) D5085_14905 PF01979 Amidohydrolase family D5085_14910 PF08007 Cupin superfamily protein D5085_14915 PF02861 Clp amino terminal domain, pathogenicity island component D5085_14915 PF17871 AAA lid domain D5085_14915 PF10431 C-terminal, D2-small domain, of ClpB protein D5085_14915 PF07724 AAA domain (Cdc48 subfamily) D5085_14915 PF00004 ATPase family associated with various cellular activities (AAA) D5085_14920 PF00672 HAMP domain D5085_14920 PF00072 Response regulator receiver domain D5085_14920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_14920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_14920 PF00512 His Kinase A (phospho-acceptor) domain D5085_14920 PF01627 Hpt domain D5085_14925 PF13407 Periplasmic binding protein domain D5085_14935 PF00072 Response regulator receiver domain D5085_14935 PF09308 LuxQ, periplasmic D5085_14935 PF00512 His Kinase A (phospho-acceptor) domain D5085_14935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_14940 PF00672 HAMP domain D5085_14940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_14940 PF01627 Hpt domain D5085_14940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_14940 PF00512 His Kinase A (phospho-acceptor) domain D5085_14940 PF00072 Response regulator receiver domain D5085_14945 PF00512 His Kinase A (phospho-acceptor) domain D5085_14945 PF01627 Hpt domain D5085_14945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_14945 PF00072 Response regulator receiver domain D5085_14945 PF00672 HAMP domain D5085_14945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_14950 PF00072 Response regulator receiver domain D5085_14955 PF00072 Response regulator receiver domain D5085_14970 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) D5085_14975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5085_14980 PF00873 AcrB/AcrD/AcrF family D5085_14985 PF01590 GAF domain D5085_14985 PF02954 Bacterial regulatory protein, Fis family D5085_14985 PF00158 Sigma-54 interaction domain D5085_15000 PF00005 ABC transporter D5085_15000 PF03412 Peptidase C39 family D5085_15000 PF00664 ABC transporter transmembrane region D5085_15005 PF00529 HlyD membrane-fusion protein of T1SS D5085_15010 PF03971 Monomeric isocitrate dehydrogenase D5085_15015 PF00216 Bacterial DNA-binding protein D5085_15035 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D5085_15045 PF00672 HAMP domain D5085_15045 PF01966 HD domain D5085_15050 PF00989 PAS fold D5085_15050 PF00512 His Kinase A (phospho-acceptor) domain D5085_15050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_15060 PF00696 Amino acid kinase family D5085_15060 PF01842 ACT domain D5085_15060 PF13840 ACT domain D5085_15065 PF02272 DHHA1 domain D5085_15065 PF01411 tRNA synthetases class II (A) D5085_15065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D5085_15075 PF00154 recA bacterial DNA recombination protein D5085_15080 PF03707 Bacterial signalling protein N terminal repeat D5085_15080 PF00563 EAL domain D5085_15080 PF00990 Diguanylate cyclase, GGDEF domain D5085_15100 PF01312 FlhB HrpN YscU SpaS Family D5085_15125 PF01169 Uncharacterized protein family UPF0016 D5085_15155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_15155 PF16591 Helical bimodular sensor domain D5085_15155 PF00672 HAMP domain D5085_15160 PF01584 CheW-like domain D5085_15170 PF01627 Hpt domain D5085_15170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_15170 PF01584 CheW-like domain D5085_15170 PF02895 Signal transducing histidine kinase, homodimeric domain D5085_15170 PF07194 P2 response regulator binding domain D5085_15180 PF00072 Response regulator receiver domain D5085_15185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_15185 PF00672 HAMP domain D5085_15185 PF02743 Cache domain D5085_15190 PF01636 Phosphotransferase enzyme family D5085_15205 PF03707 Bacterial signalling protein N terminal repeat D5085_15205 PF00990 Diguanylate cyclase, GGDEF domain D5085_15205 PF00563 EAL domain D5085_15210 PF01475 Ferric uptake regulator family D5085_15215 PF04355 SmpA / OmlA family D5085_15220 PF03364 Polyketide cyclase / dehydrase and lipid transport D5085_15225 PF00209 Sodium:neurotransmitter symporter family D5085_15235 PF01145 SPFH domain / Band 7 family D5085_15240 PF03600 Citrate transporter D5085_15265 PF11612 Type II secretion system (T2SS), protein J D5085_15265 PF07963 Prokaryotic N-terminal methylation motif D5085_15270 PF02501 Type II secretion system (T2SS), protein I D5085_15270 PF07963 Prokaryotic N-terminal methylation motif D5085_15275 PF12019 Type II transport protein GspH D5085_15275 PF07963 Prokaryotic N-terminal methylation motif D5085_15280 PF07963 Prokaryotic N-terminal methylation motif D5085_15280 PF08334 Type II secretion system (T2SS), protein G D5085_15285 PF00482 Type II secretion system (T2SS), protein F D5085_15290 PF00437 Type II/IV secretion system protein D5085_15295 PF00263 Bacterial type II and III secretion system protein D5085_15295 PF03958 Bacterial type II/III secretion system short domain D5085_15300 PF11356 Type II secretion system protein C D5085_15305 PF01702 Queuine tRNA-ribosyltransferase D5085_15310 PF02547 Queuosine biosynthesis protein D5085_15315 PF01584 CheW-like domain D5085_15320 PF00072 Response regulator receiver domain D5085_15335 PF12838 4Fe-4S dicluster domain D5085_15345 PF03270 Protein of unknown function, DUF269 D5085_15350 PF02579 Dinitrogenase iron-molybdenum cofactor D5085_15355 PF00148 Nitrogenase component 1 type Oxidoreductase D5085_15360 PF00148 Nitrogenase component 1 type Oxidoreductase D5085_15380 PF02579 Dinitrogenase iron-molybdenum cofactor D5085_15380 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal D5085_15385 PF00037 4Fe-4S binding domain D5085_15390 PF06988 NifT/FixU protein D5085_15395 PF11844 Domain of unknown function (DUF3364) D5085_15395 PF00148 Nitrogenase component 1 type Oxidoreductase D5085_15400 PF00148 Nitrogenase component 1 type Oxidoreductase D5085_15405 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family D5085_15410 PF02541 Ppx/GppA phosphatase family D5085_15420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_15420 PF00672 HAMP domain D5085_15420 PF02743 Cache domain D5085_15435 PF13426 PAS domain D5085_15435 PF00563 EAL domain D5085_15435 PF00990 Diguanylate cyclase, GGDEF domain D5085_15445 PF11849 Domain of unknown function (DUF3369) D5085_15450 PF00512 His Kinase A (phospho-acceptor) domain D5085_15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_15465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_15465 PF00672 HAMP domain D5085_15470 PF00990 Diguanylate cyclase, GGDEF domain D5085_15470 PF17151 Periplasmic sensor domain D5085_15485 PF11849 Domain of unknown function (DUF3369) D5085_15490 PF00072 Response regulator receiver domain D5085_15490 PF13188 PAS domain D5085_15490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_15490 PF00512 His Kinase A (phospho-acceptor) domain D5085_15490 PF08448 PAS fold D5085_15510 PF07556 Protein of unknown function (DUF1538) D5085_15525 PF00512 His Kinase A (phospho-acceptor) domain D5085_15525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_15530 PF18415 Histidine kinase receptor ArcB trans-membrane domain D5085_15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_15530 PF00072 Response regulator receiver domain D5085_15530 PF00512 His Kinase A (phospho-acceptor) domain D5085_15530 PF01627 Hpt domain D5085_15530 PF00989 PAS fold D5085_15535 PF00072 Response regulator receiver domain D5085_15540 PF01627 Hpt domain D5085_15540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_15540 PF00512 His Kinase A (phospho-acceptor) domain D5085_15540 PF00989 PAS fold D5085_15540 PF18415 Histidine kinase receptor ArcB trans-membrane domain D5085_15540 PF00072 Response regulator receiver domain D5085_15555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_15570 PF00037 4Fe-4S binding domain D5085_15575 PF01467 Cytidylyltransferase-like D5085_15585 PF10531 SLBB domain D5085_15585 PF02563 Polysaccharide biosynthesis/export protein D5085_15590 PF00175 Oxidoreductase NAD-binding domain D5085_15590 PF00970 Oxidoreductase FAD-binding domain D5085_15590 PF00111 2Fe-2S iron-sulfur cluster binding domain D5085_15605 PF00672 HAMP domain D5085_15605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_15605 PF17200 Single Cache domain 2 D5085_15625 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) D5085_15630 PF04356 Protein of unknown function (DUF489) D5085_15635 PF02685 Glucokinase D5085_15640 PF00483 Nucleotidyl transferase D5085_15650 PF02446 4-alpha-glucanotransferase D5085_15655 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D5085_15655 PF02806 Alpha amylase, C-terminal all-beta domain D5085_15655 PF00128 Alpha amylase, catalytic domain D5085_15660 PF00534 Glycosyl transferases group 1 D5085_15660 PF08323 Starch synthase catalytic domain D5085_15665 PF00343 Carbohydrate phosphorylase D5085_15670 PF02272 DHHA1 domain D5085_15670 PF01368 DHH family D5085_15670 PF17768 RecJ OB domain D5085_15675 PF01751 Toprim domain D5085_15675 PF00986 DNA gyrase B subunit, carboxyl terminus D5085_15675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_15675 PF00204 DNA gyrase B D5085_15680 PF00462 Glutaredoxin D5085_15685 PF00691 OmpA family D5085_15685 PF05736 OprF membrane domain D5085_15690 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D5085_15690 PF02844 Phosphoribosylglycinamide synthetase, N domain D5085_15690 PF02843 Phosphoribosylglycinamide synthetase, C domain D5085_15695 PF00563 EAL domain D5085_15695 PF00990 Diguanylate cyclase, GGDEF domain D5085_15695 PF03707 Bacterial signalling protein N terminal repeat D5085_15710 PF05193 Peptidase M16 inactive domain D5085_15710 PF00675 Insulinase (Peptidase family M16) D5085_15715 PF05193 Peptidase M16 inactive domain D5085_15715 PF00675 Insulinase (Peptidase family M16) D5085_15720 PF02881 SRP54-type protein, helical bundle domain D5085_15720 PF00448 SRP54-type protein, GTPase domain D5085_15735 PF00563 EAL domain D5085_15735 PF12792 CSS motif domain associated with EAL D5085_15745 PF13439 Glycosyltransferase Family 4 D5085_15745 PF00534 Glycosyl transferases group 1 D5085_15760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5085_15760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5085_15765 PF00999 Sodium/hydrogen exchanger family D5085_15765 PF02080 TrkA-C domain D5085_15765 PF02254 TrkA-N domain D5085_15770 PF00271 Helicase conserved C-terminal domain D5085_15770 PF02151 UvrB/uvrC motif D5085_15770 PF12344 Ultra-violet resistance protein B D5085_15770 PF17757 UvrB interaction domain D5085_15770 PF04851 Type III restriction enzyme, res subunit D5085_15825 PF00486 Transcriptional regulatory protein, C terminal D5085_15825 PF00072 Response regulator receiver domain D5085_15875 PF05736 OprF membrane domain D5085_15875 PF00691 OmpA family D5085_15885 PF05717 IS66 Orf2 like protein D5085_15895 PF00158 Sigma-54 interaction domain D5085_15895 PF00072 Response regulator receiver domain D5085_15895 PF02954 Bacterial regulatory protein, Fis family D5085_15905 PF00672 HAMP domain D5085_15905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_15905 PF00512 His Kinase A (phospho-acceptor) domain D5085_15905 PF00989 PAS fold D5085_15910 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) D5085_15915 PF01867 CRISPR associated protein Cas1 D5085_15920 PF08798 CRISPR associated protein D5085_15925 PF09704 CRISPR-associated protein (Cas_Cas5) D5085_15930 PF09344 CT1975-like protein D5085_15955 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) D5085_15960 PF18019 HD domain D5085_15960 PF18395 Cas3 C-terminal domain D5085_15985 PF18019 HD domain D5085_15985 PF18395 Cas3 C-terminal domain D5085_15995 PF00990 Diguanylate cyclase, GGDEF domain D5085_15995 PF03707 Bacterial signalling protein N terminal repeat D5085_15995 PF00563 EAL domain D5085_16015 PF03795 YCII-related domain D5085_16040 PF13840 ACT domain D5085_16040 PF00696 Amino acid kinase family D5085_16050 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D5085_16055 PF09312 SurA N-terminal domain D5085_16055 PF00639 PPIC-type PPIASE domain D5085_16060 PF04453 LPS transport system D D5085_16070 PF07724 AAA domain (Cdc48 subfamily) D5085_16070 PF10431 C-terminal, D2-small domain, of ClpB protein D5085_16070 PF06689 ClpX C4-type zinc finger D5085_16075 PF00639 PPIC-type PPIASE domain D5085_16080 PF04319 NifZ domain D5085_16085 PF03206 Nitrogen fixation protein NifW D5085_16095 PF00682 HMGL-like D5085_16100 PF00266 Aminotransferase class-V D5085_16105 PF01592 NifU-like N terminal domain D5085_16105 PF01106 NifU-like domain D5085_16105 PF04324 BFD-like [2Fe-2S] binding domain D5085_16115 PF03658 RnfH family Ubiquitin D5085_16120 PF02508 Rnf-Nqr subunit, membrane protein D5085_16125 PF04205 FMN-binding domain D5085_16130 PF03116 NQR2, RnfD, RnfE family D5085_16135 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D5085_16135 PF13375 RnfC Barrel sandwich hybrid domain D5085_16135 PF13237 4Fe-4S dicluster domain D5085_16135 PF10531 SLBB domain D5085_16140 PF04060 Putative Fe-S cluster D5085_16145 PF02508 Rnf-Nqr subunit, membrane protein D5085_16150 PF00989 PAS fold D5085_16150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_16155 PF00158 Sigma-54 interaction domain D5085_16155 PF02954 Bacterial regulatory protein, Fis family D5085_16155 PF13185 GAF domain D5085_16165 PF09820 Predicted AAA-ATPase D5085_16165 PF08011 PD-(D/E)XK nuclease superfamily D5085_16170 PF08011 PD-(D/E)XK nuclease superfamily D5085_16170 PF09820 Predicted AAA-ATPase D5085_16175 PF09820 Predicted AAA-ATPase D5085_16175 PF08011 PD-(D/E)XK nuclease superfamily D5085_16180 PF09820 Predicted AAA-ATPase D5085_16180 PF08011 PD-(D/E)XK nuclease superfamily D5085_16185 PF08011 PD-(D/E)XK nuclease superfamily D5085_16185 PF09820 Predicted AAA-ATPase D5085_16190 PF09820 Predicted AAA-ATPase D5085_16190 PF08011 PD-(D/E)XK nuclease superfamily D5085_16195 PF09820 Predicted AAA-ATPase D5085_16195 PF08011 PD-(D/E)XK nuclease superfamily D5085_16205 PF01252 Signal peptidase (SPase) II D5085_16210 PF05697 Bacterial trigger factor protein (TF) D5085_16210 PF05698 Bacterial trigger factor protein (TF) C-terminus D5085_16210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5085_16215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_16215 PF00183 Hsp90 protein D5085_16220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5085_16220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5085_16220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5085_16220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5085_16230 PF04354 ZipA, C-terminal FtsZ-binding domain D5085_16250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_16250 PF00512 His Kinase A (phospho-acceptor) domain D5085_16250 PF01627 Hpt domain D5085_16250 PF00072 Response regulator receiver domain D5085_16250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_16250 PF00672 HAMP domain D5085_16255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_16255 PF00672 HAMP domain D5085_16255 PF00512 His Kinase A (phospho-acceptor) domain D5085_16255 PF01627 Hpt domain D5085_16255 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_16255 PF00072 Response regulator receiver domain D5085_16260 PF00072 Response regulator receiver domain D5085_16265 PF02660 Glycerol-3-phosphate acyltransferase D5085_16270 PF03776 Septum formation topological specificity factor MinE D5085_16275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5085_16280 PF03775 Septum formation inhibitor MinC, C-terminal domain D5085_16280 PF05209 Septum formation inhibitor MinC, N-terminal domain D5085_16285 PF02597 ThiS family D5085_16285 PF05690 Thiazole biosynthesis protein ThiG D5085_16290 PF05690 Thiazole biosynthesis protein ThiG D5085_16295 PF02390 Putative methyltransferase D5085_16315 PF00669 Bacterial flagellin N-terminal helical region D5085_16315 PF00700 Bacterial flagellin C-terminal helical region D5085_16315 PF08884 Flagellin D3 domain D5085_16320 PF01578 Cytochrome C assembly protein D5085_16325 PF00571 CBS domain D5085_16325 PF03471 Transporter associated domain D5085_16325 PF01595 Cyclin M transmembrane N-terminal domain D5085_16335 PF07238 PilZ domain D5085_16345 PF14403 Circularly permuted ATP-grasp type 2 D5085_16350 PF00563 EAL domain D5085_16350 PF03707 Bacterial signalling protein N terminal repeat D5085_16350 PF00990 Diguanylate cyclase, GGDEF domain D5085_16360 PF00072 Response regulator receiver domain D5085_16370 PF00072 Response regulator receiver domain D5085_16370 PF01627 Hpt domain D5085_16370 PF00512 His Kinase A (phospho-acceptor) domain D5085_16370 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_16370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_16370 PF00672 HAMP domain D5085_16380 PF00512 His Kinase A (phospho-acceptor) domain D5085_16380 PF01627 Hpt domain D5085_16380 PF17149 Periplasmic sensor domain found in signal transduction proteins D5085_16380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_16380 PF00072 Response regulator receiver domain D5085_16380 PF00672 HAMP domain D5085_16385 PF00072 Response regulator receiver domain D5085_16390 PF00990 Diguanylate cyclase, GGDEF domain D5085_16390 PF00563 EAL domain D5085_16390 PF03707 Bacterial signalling protein N terminal repeat D5085_16405 PF01368 DHH family D5085_16405 PF02272 DHHA1 domain D5085_16410 PF13145 PPIC-type PPIASE domain D5085_16425 PF00216 Bacterial DNA-binding protein D5085_16430 PF00004 ATPase family associated with various cellular activities (AAA) D5085_16430 PF05362 Lon protease (S16) C-terminal proteolytic domain D5085_16430 PF02190 ATP-dependent protease La (LON) substrate-binding domain D5085_16435 PF06689 ClpX C4-type zinc finger D5085_16435 PF10431 C-terminal, D2-small domain, of ClpB protein D5085_16435 PF07724 AAA domain (Cdc48 subfamily) D5085_16440 PF00574 Clp protease D5085_16445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5085_16445 PF05697 Bacterial trigger factor protein (TF) D5085_16445 PF05698 Bacterial trigger factor protein (TF) C-terminus D5085_16455 PF13677 Membrane MotB of proton-channel complex MotA/MotB D5085_16455 PF00691 OmpA family D5085_16460 PF01618 MotA/TolQ/ExbB proton channel family D5085_16465 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5085_16475 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D5085_16475 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D5085_16480 PF01066 CDP-alcohol phosphatidyltransferase D5085_16495 PF00206 Lyase D5085_16495 PF14698 Argininosuccinate lyase C-terminal D5085_16500 PF02129 X-Pro dipeptidyl-peptidase (S15 family) D5085_16510 PF00072 Response regulator receiver domain D5085_16510 PF00196 Bacterial regulatory proteins, luxR family D5085_16515 PF05191 Adenylate kinase, active site lid D5085_16520 PF00578 AhpC/TSA family D5085_16525 PF00043 Glutathione S-transferase, C-terminal domain D5085_16525 PF02798 Glutathione S-transferase, N-terminal domain D5085_16530 PF00692 dUTPase D5085_16535 PF02976 DNA mismatch repair enzyme MutH D5085_16580 PF04452 RNA methyltransferase D5085_16585 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_16585 PF00072 Response regulator receiver domain D5085_16585 PF01627 Hpt domain D5085_16585 PF00512 His Kinase A (phospho-acceptor) domain D5085_16585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_16585 PF00672 HAMP domain D5085_16595 PF01739 CheR methyltransferase, SAM binding domain D5085_16595 PF08448 PAS fold D5085_16595 PF03705 CheR methyltransferase, all-alpha domain D5085_16595 PF01339 CheB methylesterase D5085_16605 PF09423 PhoD-like phosphatase D5085_16605 PF16655 PhoD-like phosphatase, N-terminal domain D5085_16610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_16610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_16610 PF00072 Response regulator receiver domain D5085_16610 PF00672 HAMP domain D5085_16610 PF00512 His Kinase A (phospho-acceptor) domain D5085_16610 PF01627 Hpt domain D5085_16615 PF06508 Queuosine biosynthesis protein QueC D5085_16620 PF01242 6-pyruvoyl tetrahydropterin synthase D5085_16625 PF16078 2-oxoglutarate dehydrogenase N-terminus D5085_16625 PF16870 2-oxoglutarate dehydrogenase C-terminal D5085_16625 PF02779 Transketolase, pyrimidine binding domain D5085_16625 PF00676 Dehydrogenase E1 component D5085_16630 PF03448 MgtE intracellular N domain D5085_16630 PF00571 CBS domain D5085_16630 PF01769 Divalent cation transporter D5085_16635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5085_16635 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5085_16640 PF02780 Transketolase, C-terminal domain D5085_16640 PF00364 Biotin-requiring enzyme D5085_16640 PF02779 Transketolase, pyrimidine binding domain D5085_16645 PF00676 Dehydrogenase E1 component D5085_16650 PF00709 Adenylosuccinate synthetase D5085_16655 PF13393 Histidyl-tRNA synthetase D5085_16665 PF01145 SPFH domain / Band 7 family D5085_16670 PF12221 Bacterial membrane protein N terminal D5085_16670 PF01145 SPFH domain / Band 7 family D5085_16680 PF00155 Aminotransferase class I and II D5085_16685 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D5085_16685 PF00132 Bacterial transferase hexapeptide (six repeats) D5085_16685 PF14602 Hexapeptide repeat of succinyl-transferase D5085_16690 PF01546 Peptidase family M20/M25/M40 D5085_16690 PF07687 Peptidase dimerisation domain D5085_16695 PF00311 Phosphoenolpyruvate carboxylase D5085_16700 PF00072 Response regulator receiver domain D5085_16735 PF13749 Putative ATP-dependent DNA helicase recG C-terminal D5085_16735 PF17191 RecG wedge domain D5085_16735 PF00270 DEAD/DEAH box helicase D5085_16740 PF00271 Helicase conserved C-terminal domain D5085_16740 PF00176 SNF2 family N-terminal domain D5085_16765 PF02230 Phospholipase/Carboxylesterase D5085_16770 PF01491 Frataxin-like domain D5085_16780 PF00529 HlyD membrane-fusion protein of T1SS D5085_16785 PF00005 ABC transporter D5085_16785 PF00664 ABC transporter transmembrane region D5085_16785 PF03412 Peptidase C39 family D5085_16790 PF02321 Outer membrane efflux protein D5085_16795 PF00211 Adenylate and Guanylate cyclase catalytic domain D5085_16805 PF02769 AIR synthase related protein, C-terminal domain D5085_16805 PF00586 AIR synthase related protein, N-terminal domain D5085_16810 PF00551 Formyl transferase D5085_16815 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D5085_16815 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D5085_16820 PF00202 Aminotransferase class-III D5085_16825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D5085_16825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D5085_16855 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D5085_16860 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D5085_16860 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D5085_16865 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D5085_16870 PF00146 NADH dehydrogenase D5085_16875 PF00361 Proton-conducting membrane transporter D5085_16880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D5085_16885 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D5085_16900 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D5085_16925 PF03264 NapC/NirT cytochrome c family, N-terminal region D5085_16935 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding D5085_16935 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5085_16935 PF10518 TAT (twin-arginine translocation) pathway signal sequence D5085_16940 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D5085_16940 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D5085_16950 PF01933 Uncharacterised protein family UPF0052 D5085_17000 PF00664 ABC transporter transmembrane region D5085_17000 PF00005 ABC transporter D5085_17010 PF13419 Haloacid dehalogenase-like hydrolase D5085_17025 PF01593 Flavin containing amine oxidoreductase D5085_17030 PF00106 short chain dehydrogenase D5085_17035 PF00990 Diguanylate cyclase, GGDEF domain D5085_17035 PF08448 PAS fold D5085_17040 PF18073 Rubredoxin metal binding domain D5085_17045 PF00575 S1 RNA binding domain D5085_17050 PF02224 Cytidylate kinase D5085_17055 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D5085_17060 PF02153 Prephenate dehydrogenase D5085_17060 PF01842 ACT domain D5085_17065 PF00793 DAHP synthetase I family D5085_17065 PF18152 DAHP synthase ferredoxin-like domain D5085_17070 PF00155 Aminotransferase class I and II D5085_17075 PF00800 Prephenate dehydratase D5085_17075 PF01817 Chorismate mutase type II D5085_17075 PF01842 ACT domain D5085_17080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5085_17080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5085_17080 PF01842 ACT domain D5085_17085 PF00266 Aminotransferase class-V D5085_17090 PF00521 DNA gyrase/topoisomerase IV, subunit A D5085_17090 PF03989 DNA gyrase C-terminal domain, beta-propeller D5085_17095 PF04386 Stringent starvation protein B D5085_17100 PF00043 Glutathione S-transferase, C-terminal domain D5085_17100 PF02798 Glutathione S-transferase, N-terminal domain D5085_17105 PF02167 Cytochrome C1 family D5085_17110 PF00033 Cytochrome b/b6/petB D5085_17110 PF00032 Cytochrome b(C-terminal)/b6/petD D5085_17115 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D5085_17115 PF00355 Rieske [2Fe-2S] domain D5085_17120 PF01784 NIF3 (NGG1p interacting factor 3) D5085_17135 PF03707 Bacterial signalling protein N terminal repeat D5085_17135 PF00563 EAL domain D5085_17135 PF00990 Diguanylate cyclase, GGDEF domain D5085_17140 PF02896 PEP-utilising enzyme, TIM barrel domain D5085_17140 PF00391 PEP-utilising enzyme, mobile domain D5085_17140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D5085_17145 PF07963 Prokaryotic N-terminal methylation motif D5085_17145 PF00114 Pilin (bacterial filament) D5085_17170 PF02698 DUF218 domain D5085_17185 PF00211 Adenylate and Guanylate cyclase catalytic domain D5085_17205 PF00696 Amino acid kinase family D5085_17215 PF00692 dUTPase D5085_17220 PF02441 Flavoprotein D5085_17220 PF04127 DNA / pantothenate metabolism flavoprotein D5085_17230 PF00512 His Kinase A (phospho-acceptor) domain D5085_17230 PF00989 PAS fold D5085_17230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_17235 PF00072 Response regulator receiver domain D5085_17235 PF00990 Diguanylate cyclase, GGDEF domain D5085_17240 PF00196 Bacterial regulatory proteins, luxR family D5085_17240 PF00072 Response regulator receiver domain D5085_17245 PF00072 Response regulator receiver domain D5085_17250 PF13718 GNAT acetyltransferase 2 D5085_17250 PF05127 Helicase D5085_17250 PF17176 tRNA-binding domain D5085_17250 PF08351 Domain of unknown function (DUF1726) D5085_17255 PF00005 ABC transporter D5085_17260 PF01032 FecCD transport family D5085_17270 PF07715 TonB-dependent Receptor Plug Domain D5085_17270 PF00593 TonB dependent receptor D5085_17275 PF01300 Telomere recombination D5085_17280 PF00814 Glycoprotease family D5085_17290 PF00072 Response regulator receiver domain D5085_17295 PF00534 Glycosyl transferases group 1 D5085_17295 PF00862 Sucrose synthase D5085_17300 PF00128 Alpha amylase, catalytic domain D5085_17310 PF00072 Response regulator receiver domain D5085_17315 PF05681 Fumarate hydratase (Fumerase) D5085_17315 PF05683 Fumarase C-terminus D5085_17320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_17320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_17320 PF00672 HAMP domain D5085_17320 PF00512 His Kinase A (phospho-acceptor) domain D5085_17320 PF01627 Hpt domain D5085_17320 PF00072 Response regulator receiver domain D5085_17335 PF00403 Heavy-metal-associated domain D5085_17350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5085_17350 PF02770 Acyl-CoA dehydrogenase, middle domain D5085_17350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5085_17360 PF05958 tRNA (Uracil-5-)-methyltransferase D5085_17375 PF02374 Anion-transporting ATPase D5085_17375 PF17886 HSP20-like domain found in ArsA D5085_17385 PF00291 Pyridoxal-phosphate dependent enzyme D5085_17390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5085_17415 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system D5085_17425 PF05973 Phage derived protein Gp49-like (DUF891) D5085_17430 PF01381 Helix-turn-helix D5085_17440 PF13291 ACT domain D5085_17440 PF02824 TGS domain D5085_17440 PF04607 Region found in RelA / SpoT proteins D5085_17465 PF00072 Response regulator receiver domain D5085_17465 PF01627 Hpt domain D5085_17465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_17465 PF00512 His Kinase A (phospho-acceptor) domain D5085_17470 PF00072 Response regulator receiver domain D5085_17470 PF00196 Bacterial regulatory proteins, luxR family D5085_17480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5085_17480 PF00529 HlyD membrane-fusion protein of T1SS D5085_17485 PF00005 ABC transporter D5085_17485 PF00664 ABC transporter transmembrane region D5085_17545 PF13183 4Fe-4S dicluster domain D5085_17545 PF02754 Cysteine-rich domain D5085_17555 PF00575 S1 RNA binding domain D5085_17555 PF10150 Ribonuclease E/G family D5085_17560 PF02545 Maf-like protein D5085_17565 PF02590 Predicted SPOUT methyltransferase D5085_17575 PF01467 Cytidylyltransferase-like D5085_17585 PF00171 Aldehyde dehydrogenase family D5085_17595 PF02801 Beta-ketoacyl synthase, C-terminal domain D5085_17595 PF08659 KR domain D5085_17595 PF00550 Phosphopantetheine attachment site D5085_17595 PF00109 Beta-ketoacyl synthase, N-terminal domain D5085_17595 PF16197 Ketoacyl-synthetase C-terminal extension D5085_17595 PF00698 Acyl transferase domain D5085_17595 PF14765 Polyketide synthase dehydratase D5085_17610 PF00694 Aconitase C-terminal domain D5085_17610 PF00330 Aconitase family (aconitate hydratase) D5085_17615 PF00285 Citrate synthase, C-terminal domain D5085_17625 PF07995 Glucose / Sorbosone dehydrogenase D5085_17635 PF00873 AcrB/AcrD/AcrF family D5085_17640 PF01047 MarR family D5085_17650 PF00202 Aminotransferase class-III D5085_17655 PF06339 Ectoine synthase D5085_17670 PF13419 Haloacid dehalogenase-like hydrolase D5085_17675 PF00459 Inositol monophosphatase family D5085_17680 PF00733 Asparagine synthase D5085_17680 PF13537 Glutamine amidotransferase domain D5085_17700 PF01966 HD domain D5085_17705 PF03379 CcmB protein D5085_17710 PF00005 ABC transporter D5085_17720 PF00919 Uncharacterized protein family UPF0004 D5085_17720 PF18693 TRAM domain D5085_17720 PF04055 Radical SAM superfamily D5085_17735 PF03597 Cytochrome oxidase maturation protein cbb3-type D5085_17740 PF01636 Phosphotransferase enzyme family D5085_17745 PF01370 NAD dependent epimerase/dehydratase family D5085_17745 PF08338 Domain of unknown function (DUF1731) D5085_17795 PF05134 Type II secretion system (T2SS), protein L D5085_17795 PF12693 GspL periplasmic domain D5085_17800 PF03934 Type II secretion system (T2SS), protein K D5085_17815 PF01025 GrpE D5085_17840 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D5085_17845 PF16177 Acetyl-coenzyme A synthetase N-terminus D5085_17845 PF00501 AMP-binding enzyme D5085_17845 PF13193 AMP-binding enzyme C-terminal domain D5085_17850 PF08447 PAS fold D5085_17850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5085_17855 PF13466 STAS domain D5085_17860 PF00072 Response regulator receiver domain D5085_17865 PF00486 Transcriptional regulatory protein, C terminal D5085_17865 PF00072 Response regulator receiver domain D5085_17870 PF09308 LuxQ, periplasmic D5085_17870 PF00072 Response regulator receiver domain D5085_17870 PF00512 His Kinase A (phospho-acceptor) domain D5085_17870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_17880 PF07228 Stage II sporulation protein E (SpoIIE) D5085_17880 PF00672 HAMP domain D5085_17885 PF04545 Sigma-70, region 4 D5085_17885 PF00140 Sigma-70 factor, region 1.2 D5085_17885 PF04539 Sigma-70 region 3 D5085_17885 PF04542 Sigma-70 region 2 D5085_17890 PF01476 LysM domain D5085_17890 PF01551 Peptidase family M23 D5085_17895 PF09335 SNARE associated Golgi protein D5085_17905 PF01975 Survival protein SurE D5085_17920 PF00482 Type II secretion system (T2SS), protein F D5085_17930 PF01180 Dihydroorotate dehydrogenase D5085_17935 PF00588 SpoU rRNA Methylase family D5085_17945 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D5085_17955 PF00361 Proton-conducting membrane transporter D5085_17960 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D5085_17965 PF00361 Proton-conducting membrane transporter D5085_17965 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D5085_17965 PF13244 Domain of unknown function (DUF4040) D5085_17965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D5085_17970 PF00128 Alpha amylase, catalytic domain D5085_18020 PF03949 Malic enzyme, NAD binding domain D5085_18020 PF00390 Malic enzyme, N-terminal domain D5085_18020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5085_18025 PF06574 FAD synthetase D5085_18025 PF01687 Riboflavin kinase D5085_18030 PF06827 Zinc finger found in FPG and IleRS D5085_18030 PF08264 Anticodon-binding domain of tRNA D5085_18030 PF00133 tRNA synthetases class I (I, L, M and V) D5085_18035 PF00672 HAMP domain D5085_18035 PF00211 Adenylate and Guanylate cyclase catalytic domain D5085_18040 PF09382 RQC domain D5085_18040 PF16124 RecQ zinc-binding D5085_18040 PF00570 HRDC domain D5085_18040 PF00271 Helicase conserved C-terminal domain D5085_18040 PF00270 DEAD/DEAH box helicase D5085_18080 PF02417 Chromate transporter D5085_18085 PF11855 Protein of unknown function (DUF3375) D5085_18105 PF00486 Transcriptional regulatory protein, C terminal D5085_18105 PF00072 Response regulator receiver domain D5085_18110 PF01895 PhoU domain D5085_18115 PF01895 PhoU domain D5085_18120 PF00005 ABC transporter D5085_18125 PF00528 Binding-protein-dependent transport system inner membrane component D5085_18130 PF00528 Binding-protein-dependent transport system inner membrane component D5085_18135 PF01547 Bacterial extracellular solute-binding protein D5085_18145 PF00563 EAL domain D5085_18145 PF01590 GAF domain D5085_18145 PF00990 Diguanylate cyclase, GGDEF domain D5085_18145 PF00360 Phytochrome region D5085_18150 PF12849 PBP superfamily domain D5085_18165 PF00478 IMP dehydrogenase / GMP reductase domain D5085_18165 PF00571 CBS domain D5085_18185 PF00155 Aminotransferase class I and II D5085_18190 PF13419 Haloacid dehalogenase-like hydrolase D5085_18200 PF00581 Rhodanese-like domain D5085_18200 PF01206 Sulfurtransferase TusA D5085_18205 PF16921 Tex protein YqgF-like domain D5085_18205 PF00575 S1 RNA binding domain D5085_18205 PF17674 HHH domain D5085_18205 PF09371 Tex-like protein N-terminal domain D5085_18215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5085_18215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5085_18215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5085_18215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5085_18220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5085_18220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5085_18220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5085_18220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5085_18235 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D5085_18240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D5085_18245 PF00149 Calcineurin-like phosphoesterase D5085_18250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_18250 PF00072 Response regulator receiver domain D5085_18250 PF01627 Hpt domain D5085_18250 PF00512 His Kinase A (phospho-acceptor) domain D5085_18250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_18250 PF00672 HAMP domain D5085_18255 PF00672 HAMP domain D5085_18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_18255 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5085_18255 PF00512 His Kinase A (phospho-acceptor) domain D5085_18255 PF00072 Response regulator receiver domain D5085_18255 PF01627 Hpt domain D5085_18260 PF02754 Cysteine-rich domain D5085_18265 PF13183 4Fe-4S dicluster domain D5085_18265 PF13085 2Fe-2S iron-sulfur cluster binding domain D5085_18270 PF01593 Flavin containing amine oxidoreductase D5085_18275 PF01593 Flavin containing amine oxidoreductase D5085_18280 PF00348 Polyprenyl synthetase D5085_18315 PF03951 Glutamine synthetase, beta-Grasp domain D5085_18315 PF00120 Glutamine synthetase, catalytic domain D5085_18320 PF00989 PAS fold D5085_18320 PF00512 His Kinase A (phospho-acceptor) domain D5085_18320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5085_18325 PF00158 Sigma-54 interaction domain D5085_18325 PF02954 Bacterial regulatory protein, Fis family D5085_18325 PF00072 Response regulator receiver domain D5085_18350 PF01966 HD domain D5085_18365 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D5085_18365 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D5085_18465 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D5085_18465 PF02542 YgbB family D5085_18470 PF04977 Septum formation initiator D5085_18475 PF03952 Enolase, N-terminal domain D5085_18475 PF00113 Enolase, C-terminal TIM barrel domain D5085_18480 PF00793 DAHP synthetase I family D5085_18485 PF06418 CTP synthase N-terminus D5085_18485 PF00117 Glutamine amidotransferase class-I D5085_18490 PF07072 Cell division protein D5085_18495 PF03884 DNA gyrase inhibitor YacG D5085_18510 PF00764 Arginosuccinate synthase D5085_18515 PF00563 EAL domain D5085_18515 PF00990 Diguanylate cyclase, GGDEF domain D5085_18515 PF08448 PAS fold D5085_18520 PF02566 OsmC-like protein D5085_18525 PF02540 NAD synthase D5085_18525 PF00117 Glutamine amidotransferase class-I D5085_18525 PF00958 GMP synthase C terminal domain D5085_18530 PF14437 MafB19-like deaminase D5085_18535 PF04545 Sigma-70, region 4 D5085_18535 PF00140 Sigma-70 factor, region 1.2 D5085_18535 PF04542 Sigma-70 region 2 D5085_18560 PF18030 RimK PreATP-grasp domain D5085_18560 PF08443 RimK-like ATP-grasp domain D5085_18565 PF18030 RimK PreATP-grasp domain D5085_18565 PF08443 RimK-like ATP-grasp domain D5085_18570 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D5085_18570 PF01676 Metalloenzyme superfamily D5085_18575 PF00293 NUDIX domain D5085_18580 PF03883 Peroxide stress protein YaaA D5085_18585 PF01066 CDP-alcohol phosphatidyltransferase D5085_18590 PF08459 UvrC Helix-hairpin-helix N-terminal D5085_18590 PF01541 GIY-YIG catalytic domain D5085_18590 PF02151 UvrB/uvrC motif D5085_18595 PF00196 Bacterial regulatory proteins, luxR family D5085_18595 PF00072 Response regulator receiver domain D5085_18620 PF00873 AcrB/AcrD/AcrF family D5085_18625 PF00529 HlyD membrane-fusion protein of T1SS D5085_18625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5085_18635 PF00216 Bacterial DNA-binding protein D5085_18640 PF01588 Putative tRNA binding domain D5085_18640 PF03147 Ferredoxin-fold anticodon binding domain D5085_18640 PF03484 tRNA synthetase B5 domain D5085_18640 PF03483 B3/4 domain D5085_18640 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D5085_18645 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D5085_18645 PF01409 tRNA synthetases class II core domain (F) D5085_18650 PF00453 Ribosomal protein L20 D5085_18655 PF01632 Ribosomal protein L35 D5085_18660 PF05198 Translation initiation factor IF-3, N-terminal domain D5085_18660 PF00707 Translation initiation factor IF-3, C-terminal domain D5085_18665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D5085_18665 PF03129 Anticodon binding domain D5085_18665 PF02824 TGS domain D5085_18665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D5085_18685 PF00085 Thioredoxin D5085_18690 PF00072 Response regulator receiver domain D5085_18690 PF00211 Adenylate and Guanylate cyclase catalytic domain D5085_18695 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D5085_18700 PF04376 Arginine-tRNA-protein transferase, N terminus D5085_18700 PF04377 Arginine-tRNA-protein transferase, C terminus D5085_18710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D5085_18710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D5085_18715 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D5085_18715 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D5085_18715 PF01488 Shikimate / quinate 5-dehydrogenase D5085_18735 PF00571 CBS domain D5085_18735 PF00478 IMP dehydrogenase / GMP reductase domain D5085_18745 PF00474 Sodium:solute symporter family