locus-tag class description HDN1F_00010 PF11638 DnaA N-terminal domain HDN1F_00010 PF08299 Bacterial dnaA protein helix-turn-helix HDN1F_00010 PF00308 Bacterial dnaA protein HDN1F_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain HDN1F_00020 PF02767 DNA polymerase III beta subunit, central domain HDN1F_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain HDN1F_00030 PF02463 RecF/RecN/SMC N terminal domain HDN1F_00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_00040 PF00204 DNA gyrase B HDN1F_00040 PF00986 DNA gyrase B subunit, carboxyl terminus HDN1F_00040 PF01751 Toprim domain HDN1F_00040 PF18053 DNA gyrase B subunit insert domain HDN1F_00060 PF02092 Glycyl-tRNA synthetase beta subunit HDN1F_00060 PF05746 DALR anticodon binding domain HDN1F_00070 PF02091 Glycyl-tRNA synthetase alpha subunit HDN1F_00110 PF02682 Carboxyltransferase domain, subdomain C and D HDN1F_00120 PF02626 Carboxyltransferase domain, subdomain A and B HDN1F_00130 PF03746 LamB/YcsF family HDN1F_00160 PF05368 NmrA-like family HDN1F_00170 PF01569 PAP2 superfamily HDN1F_00190 PF02698 DUF218 domain HDN1F_00210 PF00106 short chain dehydrogenase HDN1F_00220 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HDN1F_00230 PF01381 Helix-turn-helix HDN1F_00270 PF13411 MerR HTH family regulatory protein HDN1F_00280 PF01118 Semialdehyde dehydrogenase, NAD binding domain HDN1F_00300 PF00563 EAL domain HDN1F_00300 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_00300 PF03707 Bacterial signalling protein N terminal repeat HDN1F_00320 PF01131 DNA topoisomerase HDN1F_00320 PF01751 Toprim domain HDN1F_00340 PF00691 OmpA family HDN1F_00340 PF05736 OprF membrane domain HDN1F_00360 PF00072 Response regulator receiver domain HDN1F_00360 PF00486 Transcriptional regulatory protein, C terminal HDN1F_00390 PF13533 Biotin-lipoyl like HDN1F_00400 PF00873 AcrB/AcrD/AcrF family HDN1F_00420 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_00420 PF00672 HAMP domain HDN1F_00420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_00460 PF02803 Thiolase, C-terminal domain HDN1F_00460 PF00108 Thiolase, N-terminal domain HDN1F_00490 PF02481 DNA recombination-mediator protein A HDN1F_00490 PF17782 DprA winged helix domain HDN1F_00500 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_00520 PF00563 EAL domain HDN1F_00520 PF03707 Bacterial signalling protein N terminal repeat HDN1F_00520 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_00530 PF00563 EAL domain HDN1F_00530 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_00530 PF03707 Bacterial signalling protein N terminal repeat HDN1F_00540 PF03707 Bacterial signalling protein N terminal repeat HDN1F_00540 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_00540 PF00563 EAL domain HDN1F_00570 PF01432 Peptidase family M3 HDN1F_00580 PF01488 Shikimate / quinate 5-dehydrogenase HDN1F_00580 PF08501 Shikimate dehydrogenase substrate binding domain HDN1F_00580 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HDN1F_00590 PF01218 Coproporphyrinogen III oxidase HDN1F_00600 PF01300 Telomere recombination HDN1F_00610 PF00731 AIR carboxylase HDN1F_00630 PF00682 HMGL-like HDN1F_00640 PF08990 Erythronolide synthase docking HDN1F_00640 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_00640 PF08659 KR domain HDN1F_00640 PF14765 Polyketide synthase dehydratase HDN1F_00640 PF00698 Acyl transferase domain HDN1F_00640 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_00640 PF08240 Alcohol dehydrogenase GroES-like domain HDN1F_00640 PF00550 Phosphopantetheine attachment site HDN1F_00640 PF16197 Ketoacyl-synthetase C-terminal extension HDN1F_00650 PF01594 AI-2E family transporter HDN1F_00660 PF00571 CBS domain HDN1F_00670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_00670 PF00672 HAMP domain HDN1F_00770 PF01464 Transglycosylase SLT domain HDN1F_00780 PF00501 AMP-binding enzyme HDN1F_00780 PF13193 AMP-binding enzyme C-terminal domain HDN1F_00780 PF00668 Condensation domain HDN1F_00780 PF00550 Phosphopantetheine attachment site HDN1F_00790 PF00550 Phosphopantetheine attachment site HDN1F_00790 PF00668 Condensation domain HDN1F_00790 PF00975 Thioesterase domain HDN1F_00790 PF00501 AMP-binding enzyme HDN1F_00790 PF13193 AMP-binding enzyme C-terminal domain HDN1F_00800 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_00800 PF00072 Response regulator receiver domain HDN1F_00800 PF01627 Hpt domain HDN1F_00800 PF00497 Bacterial extracellular solute-binding proteins, family 3 HDN1F_00810 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_00810 PF08448 PAS fold HDN1F_00810 PF00563 EAL domain HDN1F_00820 PF01814 Hemerythrin HHE cation binding domain HDN1F_00820 PF04405 Domain of Unknown function (DUF542) HDN1F_00840 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_00840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_00840 PF00072 Response regulator receiver domain HDN1F_00840 PF00672 HAMP domain HDN1F_00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_00840 PF01627 Hpt domain HDN1F_00880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_00880 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_00880 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_00880 PF00672 HAMP domain HDN1F_00880 PF01627 Hpt domain HDN1F_00880 PF00072 Response regulator receiver domain HDN1F_00890 PF01734 Patatin-like phospholipase HDN1F_00890 PF00027 Cyclic nucleotide-binding domain HDN1F_00920 PF01678 Diaminopimelate epimerase HDN1F_00930 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HDN1F_00930 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HDN1F_00940 PF01295 Adenylate cyclase, class-I HDN1F_00940 PF12633 Adenylate cyclase NT domain HDN1F_00950 PF00563 EAL domain HDN1F_00950 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_00950 PF13426 PAS domain HDN1F_00960 PF00206 Lyase HDN1F_00960 PF14698 Argininosuccinate lyase C-terminal HDN1F_00970 PF06580 Histidine kinase HDN1F_00970 PF07694 5TMR of 5TMR-LYT HDN1F_00970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_00980 PF05853 beta-keto acid cleavage enzyme HDN1F_00990 PF04397 LytTr DNA-binding domain HDN1F_00990 PF00072 Response regulator receiver domain HDN1F_01000 PF03900 Porphobilinogen deaminase, C-terminal domain HDN1F_01000 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HDN1F_01010 PF02602 Uroporphyrinogen-III synthase HemD HDN1F_01040 PF07497 Rho termination factor, RNA-binding domain HDN1F_01040 PF07498 Rho termination factor, N-terminal domain HDN1F_01040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HDN1F_01050 PF00085 Thioredoxin HDN1F_01060 PF02541 Ppx/GppA phosphatase family HDN1F_01070 PF00884 Sulfatase HDN1F_01090 PF00005 ABC transporter HDN1F_01140 PF00535 Glycosyl transferase family 2 HDN1F_01180 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HDN1F_01190 PF00585 C-terminal regulatory domain of Threonine dehydratase HDN1F_01190 PF00291 Pyridoxal-phosphate dependent enzyme HDN1F_01200 PF01812 5-formyltetrahydrofolate cyclo-ligase family HDN1F_01210 PF05164 Cell division protein ZapA HDN1F_01230 PF03695 Uncharacterised protein family (UPF0149) HDN1F_01240 PF05195 Aminopeptidase P, N-terminal domain HDN1F_01240 PF00557 Metallopeptidase family M24 HDN1F_01250 PF08669 Glycine cleavage T-protein C-terminal barrel domain HDN1F_01250 PF01571 Aminomethyltransferase folate-binding domain HDN1F_01260 PF01597 Glycine cleavage H-protein HDN1F_01270 PF02347 Glycine cleavage system P-protein HDN1F_01280 PF02347 Glycine cleavage system P-protein HDN1F_01310 PF17674 HHH domain HDN1F_01310 PF00575 S1 RNA binding domain HDN1F_01310 PF09371 Tex-like protein N-terminal domain HDN1F_01310 PF16921 Tex protein YqgF-like domain HDN1F_01320 PF00486 Transcriptional regulatory protein, C terminal HDN1F_01320 PF00072 Response regulator receiver domain HDN1F_01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_01330 PF00672 HAMP domain HDN1F_01330 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_01360 PF00293 NUDIX domain HDN1F_01370 PF05524 PEP-utilising enzyme, N-terminal HDN1F_01370 PF01590 GAF domain HDN1F_01370 PF02896 PEP-utilising enzyme, TIM barrel domain HDN1F_01370 PF00391 PEP-utilising enzyme, mobile domain HDN1F_01390 PF01790 Prolipoprotein diacylglyceryl transferase HDN1F_01400 PF00303 Thymidylate synthase HDN1F_01410 PF00186 Dihydrofolate reductase HDN1F_01430 PF12795 Mechanosensitive ion channel porin domain HDN1F_01430 PF00924 Mechanosensitive ion channel HDN1F_01430 PF12794 Mechanosensitive ion channel inner membrane domain 1 HDN1F_01440 PF04102 SlyX HDN1F_01510 PF00920 Dehydratase family HDN1F_01550 PF03466 LysR substrate binding domain HDN1F_01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_01560 PF05726 Pirin C-terminal cupin domain HDN1F_01560 PF02678 Pirin HDN1F_01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_01580 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_01580 PF09308 LuxQ, periplasmic HDN1F_01580 PF00072 Response regulator receiver domain HDN1F_01590 PF00072 Response regulator receiver domain HDN1F_01620 PF00625 Guanylate kinase HDN1F_01630 PF01595 Cyclin M transmembrane N-terminal domain HDN1F_01630 PF03471 Transporter associated domain HDN1F_01630 PF00571 CBS domain HDN1F_01640 PF07690 Major Facilitator Superfamily HDN1F_01650 PF13452 N-terminal half of MaoC dehydratase HDN1F_01700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_01700 PF00672 HAMP domain HDN1F_01710 PF04055 Radical SAM superfamily HDN1F_01710 PF06969 HemN C-terminal domain HDN1F_01720 PF01725 Ham1 family HDN1F_01740 PF07021 Methionine biosynthesis protein MetW HDN1F_01740 PF00561 alpha/beta hydrolase fold HDN1F_01750 PF00561 alpha/beta hydrolase fold HDN1F_01790 PF07194 P2 response regulator binding domain HDN1F_01790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_01790 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_01790 PF01584 CheW-like domain HDN1F_01790 PF01627 Hpt domain HDN1F_01800 PF01584 CheW-like domain HDN1F_01810 PF03975 CheD chemotactic sensory transduction HDN1F_01820 PF00563 EAL domain HDN1F_01820 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_01820 PF03707 Bacterial signalling protein N terminal repeat HDN1F_01830 PF03109 ABC1 family HDN1F_01840 PF00950 ABC 3 transport family HDN1F_01850 PF00005 ABC transporter HDN1F_01870 PF01636 Phosphotransferase enzyme family HDN1F_01910 PF04357 TamB, inner membrane protein subunit of TAM complex HDN1F_01920 PF07244 Surface antigen variable number repeat HDN1F_01920 PF17243 POTRA domain TamA domain 1 HDN1F_01920 PF01103 Surface antigen HDN1F_02010 PF07859 alpha/beta hydrolase fold HDN1F_02020 PF00282 Pyridoxal-dependent decarboxylase conserved domain HDN1F_02040 PF01367 5'-3' exonuclease, C-terminal SAM fold HDN1F_02040 PF01612 3'-5' exonuclease HDN1F_02040 PF00476 DNA polymerase family A HDN1F_02040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HDN1F_02110 PF07690 Major Facilitator Superfamily HDN1F_02130 PF13335 Magnesium chelatase, subunit ChlI C-terminal HDN1F_02130 PF01078 Magnesium chelatase, subunit ChlI HDN1F_02140 PF00107 Zinc-binding dehydrogenase HDN1F_02140 PF08240 Alcohol dehydrogenase GroES-like domain HDN1F_02170 PF08003 Protein of unknown function (DUF1698) HDN1F_02180 PF03435 Saccharopine dehydrogenase NADP binding domain HDN1F_02190 PF13649 Methyltransferase domain HDN1F_02250 PF00580 UvrD/REP helicase N-terminal domain HDN1F_02250 PF13361 UvrD-like helicase C-terminal domain HDN1F_02260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_02290 PF01406 tRNA synthetases class I (C) catalytic domain HDN1F_02290 PF09190 DALR domain HDN1F_02300 PF03129 Anticodon binding domain HDN1F_02300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HDN1F_02300 PF02824 TGS domain HDN1F_02300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HDN1F_02390 PF00391 PEP-utilising enzyme, mobile domain HDN1F_02390 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HDN1F_02410 PF00501 AMP-binding enzyme HDN1F_02410 PF13193 AMP-binding enzyme C-terminal domain HDN1F_02410 PF00668 Condensation domain HDN1F_02410 PF00550 Phosphopantetheine attachment site HDN1F_02460 PF08274 PhnA Zinc-Ribbon HDN1F_02460 PF03831 PhnA domain HDN1F_02470 PF03707 Bacterial signalling protein N terminal repeat HDN1F_02470 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_02470 PF00563 EAL domain HDN1F_02510 PF00108 Thiolase, N-terminal domain HDN1F_02510 PF02803 Thiolase, C-terminal domain HDN1F_02520 PF06974 Protein of unknown function (DUF1298) HDN1F_02520 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HDN1F_02530 PF00106 short chain dehydrogenase HDN1F_02540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HDN1F_02540 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_02570 PF00501 AMP-binding enzyme HDN1F_02570 PF13193 AMP-binding enzyme C-terminal domain HDN1F_02580 PF00890 FAD binding domain HDN1F_02650 PF11953 Domain of unknown function (DUF3470) HDN1F_02650 PF00037 4Fe-4S binding domain HDN1F_02670 PF00196 Bacterial regulatory proteins, luxR family HDN1F_02690 PF10091 Putative glucoamylase HDN1F_02690 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HDN1F_02690 PF06165 Glycosyltransferase family 36 HDN1F_02700 PF06472 ABC transporter transmembrane region 2 HDN1F_02700 PF00005 ABC transporter HDN1F_02710 PF04286 Protein of unknown function (DUF445) HDN1F_02720 PF03435 Saccharopine dehydrogenase NADP binding domain HDN1F_02730 PF12680 SnoaL-like domain HDN1F_02750 PF00355 Rieske [2Fe-2S] domain HDN1F_02830 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_02830 PF09820 Predicted AAA-ATPase HDN1F_02840 PF01042 Endoribonuclease L-PSP HDN1F_02850 PF04607 Region found in RelA / SpoT proteins HDN1F_02850 PF02824 TGS domain HDN1F_02850 PF13291 ACT domain HDN1F_02860 PF01192 RNA polymerase Rpb6 HDN1F_02870 PF07690 Major Facilitator Superfamily HDN1F_02880 PF13533 Biotin-lipoyl like HDN1F_02900 PF07690 Major Facilitator Superfamily HDN1F_02910 PF00571 CBS domain HDN1F_02910 PF03448 MgtE intracellular N domain HDN1F_02910 PF01769 Divalent cation transporter HDN1F_02920 PF02798 Glutathione S-transferase, N-terminal domain HDN1F_02930 PF13230 Glutamine amidotransferases class-II HDN1F_02940 PF09308 LuxQ, periplasmic HDN1F_02940 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_02940 PF00072 Response regulator receiver domain HDN1F_02960 PF13472 GDSL-like Lipase/Acylhydrolase family HDN1F_02980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_02980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_02990 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_02990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_02990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_03000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_03000 PF00529 HlyD membrane-fusion protein of T1SS HDN1F_03010 PF00873 AcrB/AcrD/AcrF family HDN1F_03030 PF00202 Aminotransferase class-III HDN1F_03050 PF00529 HlyD membrane-fusion protein of T1SS HDN1F_03050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_03060 PF00873 AcrB/AcrD/AcrF family HDN1F_03070 PF09335 SNARE associated Golgi protein HDN1F_03090 PF02581 Thiamine monophosphate synthase HDN1F_03100 PF08543 Phosphomethylpyrimidine kinase HDN1F_03100 PF02581 Thiamine monophosphate synthase HDN1F_03170 PF00829 Ribosomal prokaryotic L21 protein HDN1F_03180 PF01016 Ribosomal L27 protein HDN1F_03200 PF01926 50S ribosome-binding GTPase HDN1F_03200 PF01018 GTP1/OBG HDN1F_03210 PF01472 PUA domain HDN1F_03210 PF00696 Amino acid kinase family HDN1F_03220 PF01649 Ribosomal protein S20 HDN1F_03230 PF01687 Riboflavin kinase HDN1F_03230 PF06574 FAD synthetase HDN1F_03240 PF08264 Anticodon-binding domain of tRNA HDN1F_03240 PF00133 tRNA synthetases class I (I, L, M and V) HDN1F_03240 PF06827 Zinc finger found in FPG and IleRS HDN1F_03250 PF01252 Signal peptidase (SPase) II HDN1F_03260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HDN1F_03270 PF02401 LytB protein HDN1F_03280 PF07963 Prokaryotic N-terminal methylation motif HDN1F_03280 PF00114 Pilin (bacterial filament) HDN1F_03340 PF01266 FAD dependent oxidoreductase HDN1F_03350 PF02954 Bacterial regulatory protein, Fis family HDN1F_03350 PF00158 Sigma-54 interaction domain HDN1F_03350 PF00072 Response regulator receiver domain HDN1F_03370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_03370 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_03390 PF13525 Outer membrane lipoprotein HDN1F_03400 PF00849 RNA pseudouridylate synthase HDN1F_03400 PF01479 S4 domain HDN1F_03420 PF07724 AAA domain (Cdc48 subfamily) HDN1F_03420 PF17871 AAA lid domain HDN1F_03420 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_03420 PF02861 Clp amino terminal domain, pathogenicity island component HDN1F_03420 PF10431 C-terminal, D2-small domain, of ClpB protein HDN1F_03450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HDN1F_03450 PF00205 Thiamine pyrophosphate enzyme, central domain HDN1F_03450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HDN1F_03460 PF10369 Small subunit of acetolactate synthase HDN1F_03470 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HDN1F_03470 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HDN1F_03480 PF01066 CDP-alcohol phosphatidyltransferase HDN1F_03510 PF03143 Elongation factor Tu C-terminal domain HDN1F_03510 PF03144 Elongation factor Tu domain 2 HDN1F_03510 PF00009 Elongation factor Tu GTP binding domain HDN1F_03520 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HDN1F_03530 PF02357 Transcription termination factor nusG HDN1F_03530 PF00467 KOW motif HDN1F_03540 PF03946 Ribosomal protein L11, N-terminal domain HDN1F_03540 PF00298 Ribosomal protein L11, RNA binding domain HDN1F_03550 PF00687 Ribosomal protein L1p/L10e family HDN1F_03560 PF00466 Ribosomal protein L10 HDN1F_03570 PF00542 Ribosomal protein L7/L12 C-terminal domain HDN1F_03570 PF16320 Ribosomal protein L7/L12 dimerisation domain HDN1F_03580 PF04565 RNA polymerase Rpb2, domain 3 HDN1F_03580 PF04560 RNA polymerase Rpb2, domain 7 HDN1F_03580 PF00562 RNA polymerase Rpb2, domain 6 HDN1F_03580 PF10385 RNA polymerase beta subunit external 1 domain HDN1F_03580 PF04563 RNA polymerase beta subunit HDN1F_03580 PF04561 RNA polymerase Rpb2, domain 2 HDN1F_03590 PF04983 RNA polymerase Rpb1, domain 3 HDN1F_03590 PF04998 RNA polymerase Rpb1, domain 5 HDN1F_03590 PF05000 RNA polymerase Rpb1, domain 4 HDN1F_03590 PF00623 RNA polymerase Rpb1, domain 2 HDN1F_03590 PF04997 RNA polymerase Rpb1, domain 1 HDN1F_03600 PF00164 Ribosomal protein S12/S23 HDN1F_03610 PF00177 Ribosomal protein S7p/S5e HDN1F_03620 PF03144 Elongation factor Tu domain 2 HDN1F_03620 PF00009 Elongation factor Tu GTP binding domain HDN1F_03620 PF03764 Elongation factor G, domain IV HDN1F_03620 PF14492 Elongation Factor G, domain II HDN1F_03620 PF00679 Elongation factor G C-terminus HDN1F_03630 PF03144 Elongation factor Tu domain 2 HDN1F_03630 PF03143 Elongation factor Tu C-terminal domain HDN1F_03630 PF00009 Elongation factor Tu GTP binding domain HDN1F_03640 PF00338 Ribosomal protein S10p/S20e HDN1F_03650 PF00297 Ribosomal protein L3 HDN1F_03660 PF00573 Ribosomal protein L4/L1 family HDN1F_03670 PF00276 Ribosomal protein L23 HDN1F_03680 PF00181 Ribosomal Proteins L2, RNA binding domain HDN1F_03680 PF03947 Ribosomal Proteins L2, C-terminal domain HDN1F_03690 PF00203 Ribosomal protein S19 HDN1F_03700 PF00237 Ribosomal protein L22p/L17e HDN1F_03710 PF07650 KH domain HDN1F_03710 PF00189 Ribosomal protein S3, C-terminal domain HDN1F_03720 PF00252 Ribosomal protein L16p/L10e HDN1F_03730 PF00831 Ribosomal L29 protein HDN1F_03740 PF00366 Ribosomal protein S17 HDN1F_03750 PF00238 Ribosomal protein L14p/L23e HDN1F_03760 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HDN1F_03760 PF00467 KOW motif HDN1F_03770 PF00673 ribosomal L5P family C-terminus HDN1F_03770 PF00281 Ribosomal protein L5 HDN1F_03780 PF00253 Ribosomal protein S14p/S29e HDN1F_03790 PF00410 Ribosomal protein S8 HDN1F_03800 PF00347 Ribosomal protein L6 HDN1F_03810 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HDN1F_03820 PF00333 Ribosomal protein S5, N-terminal domain HDN1F_03820 PF03719 Ribosomal protein S5, C-terminal domain HDN1F_03830 PF00327 Ribosomal protein L30p/L7e HDN1F_03840 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HDN1F_03850 PF00344 SecY translocase HDN1F_03860 PF00416 Ribosomal protein S13/S18 HDN1F_03870 PF00411 Ribosomal protein S11 HDN1F_03880 PF00163 Ribosomal protein S4/S9 N-terminal domain HDN1F_03880 PF01479 S4 domain HDN1F_03890 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HDN1F_03890 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HDN1F_03890 PF01000 RNA polymerase Rpb3/RpoA insert domain HDN1F_03900 PF01196 Ribosomal protein L17 HDN1F_03910 PF17760 UvrA interaction domain HDN1F_03910 PF17755 UvrA DNA-binding domain HDN1F_03920 PF00436 Single-strand binding protein family HDN1F_04000 PF02384 N-6 DNA Methylase HDN1F_04020 PF00271 Helicase conserved C-terminal domain HDN1F_04020 PF09382 RQC domain HDN1F_04020 PF00270 DEAD/DEAH box helicase HDN1F_04020 PF00570 HRDC domain HDN1F_04020 PF16124 RecQ zinc-binding HDN1F_04030 PF02481 DNA recombination-mediator protein A HDN1F_04030 PF17782 DprA winged helix domain HDN1F_04040 PF11867 Domain of unknown function (DUF3387) HDN1F_04040 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HDN1F_04040 PF18766 SWI2/SNF2 ATPase HDN1F_04060 PF11356 Type II secretion system protein C HDN1F_04070 PF03958 Bacterial type II/III secretion system short domain HDN1F_04070 PF00263 Bacterial type II and III secretion system protein HDN1F_04080 PF00156 Phosphoribosyl transferase domain HDN1F_04090 PF04055 Radical SAM superfamily HDN1F_04090 PF06968 Biotin and Thiamin Synthesis associated domain HDN1F_04100 PF00155 Aminotransferase class I and II HDN1F_04110 PF00561 alpha/beta hydrolase fold HDN1F_04120 PF08241 Methyltransferase domain HDN1F_04140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HDN1F_04140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HDN1F_04150 PF02913 FAD linked oxidases, C-terminal domain HDN1F_04150 PF01565 FAD binding domain HDN1F_04160 PF01557 Fumarylacetoacetate (FAA) hydrolase family HDN1F_04170 PF01507 Phosphoadenosine phosphosulfate reductase family HDN1F_04180 PF12833 Helix-turn-helix domain HDN1F_04180 PF12852 Cupin HDN1F_04190 PF00487 Fatty acid desaturase HDN1F_04230 PF02954 Bacterial regulatory protein, Fis family HDN1F_04230 PF00158 Sigma-54 interaction domain HDN1F_04230 PF00072 Response regulator receiver domain HDN1F_04240 PF08447 PAS fold HDN1F_04240 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_04240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_04240 PF00989 PAS fold HDN1F_04260 PF00749 tRNA synthetases class I (E and Q), catalytic domain HDN1F_04270 PF01258 Prokaryotic dksA/traR C4-type zinc finger HDN1F_04280 PF00155 Aminotransferase class I and II HDN1F_04290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_04290 PF03466 LysR substrate binding domain HDN1F_04300 PF16200 C-terminal region of band_7 HDN1F_04300 PF01145 SPFH domain / Band 7 family HDN1F_04340 PF00753 Metallo-beta-lactamase superfamily HDN1F_04340 PF12706 Beta-lactamase superfamily domain HDN1F_04370 PF01590 GAF domain HDN1F_04370 PF00563 EAL domain HDN1F_04370 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_04370 PF00360 Phytochrome region HDN1F_04380 PF03099 Biotin/lipoate A/B protein ligase family HDN1F_04400 PF00768 D-alanyl-D-alanine carboxypeptidase HDN1F_04400 PF07943 Penicillin-binding protein 5, C-terminal domain HDN1F_04410 PF05036 Sporulation related domain HDN1F_04410 PF03330 Lytic transglycolase HDN1F_04420 PF13406 Transglycosylase SLT domain HDN1F_04430 PF01098 Cell cycle protein HDN1F_04440 PF00905 Penicillin binding protein transpeptidase domain HDN1F_04440 PF03717 Penicillin-binding Protein dimerisation domain HDN1F_04450 PF02590 Predicted SPOUT methyltransferase HDN1F_04470 PF01467 Cytidylyltransferase-like HDN1F_04480 PF00171 Aldehyde dehydrogenase family HDN1F_04540 PF05567 Neisseria PilC beta-propeller domain HDN1F_04600 PF08502 LeuA allosteric (dimerisation) domain HDN1F_04600 PF00682 HMGL-like HDN1F_04610 PF01037 Lrp/AsnC ligand binding domain HDN1F_04620 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_04620 PF09820 Predicted AAA-ATPase HDN1F_04630 PF09820 Predicted AAA-ATPase HDN1F_04630 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_04670 PF01032 FecCD transport family HDN1F_04680 PF00005 ABC transporter HDN1F_04690 PF00563 EAL domain HDN1F_04690 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_04690 PF03707 Bacterial signalling protein N terminal repeat HDN1F_04700 PF00067 Cytochrome P450 HDN1F_04700 PF00175 Oxidoreductase NAD-binding domain HDN1F_04700 PF00258 Flavodoxin HDN1F_04700 PF00667 FAD binding domain HDN1F_04720 PF01568 Molydopterin dinucleotide binding domain HDN1F_04720 PF00384 Molybdopterin oxidoreductase HDN1F_04720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HDN1F_04730 PF00465 Iron-containing alcohol dehydrogenase HDN1F_04750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_04750 PF00672 HAMP domain HDN1F_04760 PF04304 Protein of unknown function (DUF454) HDN1F_04800 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HDN1F_04810 PF01850 PIN domain HDN1F_04870 PF01476 LysM domain HDN1F_04900 PF00403 Heavy-metal-associated domain HDN1F_04910 PF00873 AcrB/AcrD/AcrF family HDN1F_04920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_04920 PF00529 HlyD membrane-fusion protein of T1SS HDN1F_04930 PF02321 Outer membrane efflux protein HDN1F_04960 PF00080 Copper/zinc superoxide dismutase (SODC) HDN1F_04970 PF00905 Penicillin binding protein transpeptidase domain HDN1F_04980 PF08331 Domain of unknown function (DUF1730) HDN1F_05010 PF03459 TOBE domain HDN1F_05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_05100 PF00005 ABC transporter HDN1F_05120 PF03781 Sulfatase-modifying factor enzyme 1 HDN1F_05150 PF08340 Domain of unknown function (DUF1732) HDN1F_05150 PF03755 YicC-like family, N-terminal region HDN1F_05160 PF01138 3' exoribonuclease family, domain 1 HDN1F_05160 PF03725 3' exoribonuclease family, domain 2 HDN1F_05170 PF03372 Endonuclease/Exonuclease/phosphatase family HDN1F_05180 PF00156 Phosphoribosyl transferase domain HDN1F_05200 PF00440 Bacterial regulatory proteins, tetR family HDN1F_05210 PF00696 Amino acid kinase family HDN1F_05220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HDN1F_05220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HDN1F_05220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HDN1F_05220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HDN1F_05230 PF02441 Flavoprotein HDN1F_05230 PF04127 DNA / pantothenate metabolism flavoprotein HDN1F_05240 PF04002 RadC-like JAB domain HDN1F_05250 PF00830 Ribosomal L28 family HDN1F_05260 PF00471 Ribosomal protein L33 HDN1F_05270 PF06827 Zinc finger found in FPG and IleRS HDN1F_05270 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HDN1F_05270 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HDN1F_05300 PF01467 Cytidylyltransferase-like HDN1F_05320 PF00293 NUDIX domain HDN1F_05330 PF00171 Aldehyde dehydrogenase family HDN1F_05360 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_05360 PF18267 Rubredoxin NAD+ reductase C-terminal domain HDN1F_05360 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HDN1F_05360 PF04324 BFD-like [2Fe-2S] binding domain HDN1F_05360 PF13806 Rieske-like [2Fe-2S] domain HDN1F_05360 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HDN1F_05370 PF04324 BFD-like [2Fe-2S] binding domain HDN1F_05370 PF18267 Rubredoxin NAD+ reductase C-terminal domain HDN1F_05370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HDN1F_05370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HDN1F_05370 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_05370 PF13806 Rieske-like [2Fe-2S] domain HDN1F_05380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HDN1F_05390 PF01565 FAD binding domain HDN1F_05390 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HDN1F_05400 PF00561 alpha/beta hydrolase fold HDN1F_05420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HDN1F_05420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HDN1F_05420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HDN1F_05430 PF02397 Bacterial sugar transferase HDN1F_05510 PF01820 D-ala D-ala ligase N-terminus HDN1F_05510 PF07478 D-ala D-ala ligase C-terminus HDN1F_05520 PF01522 Polysaccharide deacetylase HDN1F_05550 PF01757 Acyltransferase family HDN1F_05580 PF00534 Glycosyl transferases group 1 HDN1F_05580 PF00535 Glycosyl transferase family 2 HDN1F_05590 PF01757 Acyltransferase family HDN1F_05600 PF01451 Low molecular weight phosphotyrosine protein phosphatase HDN1F_05610 PF00664 ABC transporter transmembrane region HDN1F_05610 PF00005 ABC transporter HDN1F_05620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HDN1F_05630 PF00535 Glycosyl transferase family 2 HDN1F_05640 PF05951 Bacterial protein of unknown function (DUF882) HDN1F_05650 PF01471 Putative peptidoglycan binding domain HDN1F_05650 PF03734 L,D-transpeptidase catalytic domain HDN1F_05660 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_05660 PF16197 Ketoacyl-synthetase C-terminal extension HDN1F_05660 PF00698 Acyl transferase domain HDN1F_05660 PF00668 Condensation domain HDN1F_05660 PF00550 Phosphopantetheine attachment site HDN1F_05660 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_05670 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_05670 PF00501 AMP-binding enzyme HDN1F_05670 PF13193 AMP-binding enzyme C-terminal domain HDN1F_05670 PF00668 Condensation domain HDN1F_05670 PF16197 Ketoacyl-synthetase C-terminal extension HDN1F_05670 PF00550 Phosphopantetheine attachment site HDN1F_05670 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_05670 PF00202 Aminotransferase class-III HDN1F_05680 PF13193 AMP-binding enzyme C-terminal domain HDN1F_05680 PF00668 Condensation domain HDN1F_05680 PF00501 AMP-binding enzyme HDN1F_05680 PF00975 Thioesterase domain HDN1F_05680 PF00550 Phosphopantetheine attachment site HDN1F_05690 PF00501 AMP-binding enzyme HDN1F_05690 PF00975 Thioesterase domain HDN1F_05690 PF00550 Phosphopantetheine attachment site HDN1F_05690 PF00668 Condensation domain HDN1F_05690 PF13193 AMP-binding enzyme C-terminal domain HDN1F_05700 PF02535 ZIP Zinc transporter HDN1F_05710 PF00206 Lyase HDN1F_05710 PF10415 Fumarase C C-terminus HDN1F_05730 PF12320 Type 5 capsule protein repressor C-terminal domain HDN1F_05730 PF00149 Calcineurin-like phosphoesterase HDN1F_05740 PF05724 Thiopurine S-methyltransferase (TPMT) HDN1F_05750 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal HDN1F_05750 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal HDN1F_05770 PF01292 Prokaryotic cytochrome b561 HDN1F_05780 PF04264 YceI-like domain HDN1F_05790 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HDN1F_05800 PF01627 Hpt domain HDN1F_05800 PF07194 P2 response regulator binding domain HDN1F_05800 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_05800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_05800 PF01584 CheW-like domain HDN1F_05820 PF12419 SNF2 Helicase protein HDN1F_05820 PF00271 Helicase conserved C-terminal domain HDN1F_05820 PF00176 SNF2 family N-terminal domain HDN1F_05830 PF03330 Lytic transglycolase HDN1F_05840 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HDN1F_05850 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HDN1F_05860 PF02910 Fumarate reductase flavoprotein C-term HDN1F_05860 PF00890 FAD binding domain HDN1F_05870 PF13085 2Fe-2S iron-sulfur cluster binding domain HDN1F_05890 PF00893 Small Multidrug Resistance protein HDN1F_05900 PF00667 FAD binding domain HDN1F_05900 PF00258 Flavodoxin HDN1F_05900 PF00175 Oxidoreductase NAD-binding domain HDN1F_05910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HDN1F_05910 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HDN1F_05920 PF02563 Polysaccharide biosynthesis/export protein HDN1F_05920 PF10531 SLBB domain HDN1F_06050 PF00535 Glycosyl transferase family 2 HDN1F_06060 PF00534 Glycosyl transferases group 1 HDN1F_06060 PF13439 Glycosyltransferase Family 4 HDN1F_06080 PF01757 Acyltransferase family HDN1F_06090 PF13439 Glycosyltransferase Family 4 HDN1F_06090 PF00534 Glycosyl transferases group 1 HDN1F_06120 PF13005 zinc-finger binding domain of transposase IS66 HDN1F_06120 PF13007 Transposase C of IS166 homeodomain HDN1F_06120 PF13817 IS66 C-terminal element HDN1F_06120 PF03050 Transposase IS66 family HDN1F_06130 PF05717 IS66 Orf2 like protein HDN1F_06150 PF02637 GatB domain HDN1F_06150 PF02934 GatB/GatE catalytic domain HDN1F_06160 PF01425 Amidase HDN1F_06170 PF02686 Glu-tRNAGln amidotransferase C subunit HDN1F_06190 PF04085 rod shape-determining protein MreC HDN1F_06200 PF04093 rod shape-determining protein MreD HDN1F_06210 PF02545 Maf-like protein HDN1F_06220 PF00575 S1 RNA binding domain HDN1F_06220 PF10150 Ribonuclease E/G family HDN1F_06240 PF00795 Carbon-nitrogen hydrolase HDN1F_06250 PF04751 Protein of unknown function (DUF615) HDN1F_06270 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HDN1F_06270 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HDN1F_06280 PF00381 PTS HPr component phosphorylation site HDN1F_06290 PF03668 P-loop ATPase protein family HDN1F_06300 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HDN1F_06310 PF04963 Sigma-54 factor, core binding domain HDN1F_06310 PF04552 Sigma-54, DNA binding domain HDN1F_06310 PF00309 Sigma-54 factor, Activator interacting domain (AID) HDN1F_06320 PF12399 Branched-chain amino acid ATP-binding cassette transporter HDN1F_06320 PF00005 ABC transporter HDN1F_06330 PF03968 OstA-like protein HDN1F_06350 PF00571 CBS domain HDN1F_06350 PF01380 SIS domain HDN1F_06360 PF00005 ABC transporter HDN1F_06370 PF02405 Permease MlaE HDN1F_06380 PF02470 MlaD protein HDN1F_06400 PF01722 BolA-like protein HDN1F_06410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HDN1F_06420 PF01634 ATP phosphoribosyltransferase HDN1F_06430 PF00815 Histidinol dehydrogenase HDN1F_06440 PF00155 Aminotransferase class I and II HDN1F_06450 PF13180 PDZ domain HDN1F_06450 PF17820 PDZ domain HDN1F_06460 PF01784 NIF3 (NGG1p interacting factor 3) HDN1F_06470 PF14306 PUA-like domain HDN1F_06470 PF01747 ATP-sulfurylase HDN1F_06480 PF00011 Hsp20/alpha crystallin family HDN1F_06500 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HDN1F_06510 PF03969 AFG1-like ATPase HDN1F_06520 PF00572 Ribosomal protein L13 HDN1F_06530 PF00380 Ribosomal protein S9/S16 HDN1F_06540 PF00355 Rieske [2Fe-2S] domain HDN1F_06540 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HDN1F_06550 PF00032 Cytochrome b(C-terminal)/b6/petD HDN1F_06550 PF00033 Cytochrome b/b6/petB HDN1F_06560 PF02167 Cytochrome C1 family HDN1F_06570 PF04386 Stringent starvation protein B HDN1F_06580 PF04972 BON domain HDN1F_06590 PF13580 SIS domain HDN1F_06610 PF02021 Uncharacterised protein family UPF0102 HDN1F_06620 PF04348 LppC putative lipoprotein HDN1F_06630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_06640 PF02381 MraZ protein, putative antitoxin-like HDN1F_06650 PF01795 MraW methylase family HDN1F_06660 PF04999 Cell division protein FtsL HDN1F_06670 PF03717 Penicillin-binding Protein dimerisation domain HDN1F_06670 PF00905 Penicillin binding protein transpeptidase domain HDN1F_06680 PF01225 Mur ligase family, catalytic domain HDN1F_06680 PF02875 Mur ligase family, glutamate ligase domain HDN1F_06680 PF08245 Mur ligase middle domain HDN1F_06690 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HDN1F_06690 PF00953 Glycosyl transferase family 4 HDN1F_06700 PF02875 Mur ligase family, glutamate ligase domain HDN1F_06700 PF08245 Mur ligase middle domain HDN1F_06710 PF01098 Cell cycle protein HDN1F_06720 PF04101 Glycosyltransferase family 28 C-terminal domain HDN1F_06720 PF03033 Glycosyltransferase family 28 N-terminal domain HDN1F_06730 PF08245 Mur ligase middle domain HDN1F_06730 PF01225 Mur ligase family, catalytic domain HDN1F_06730 PF02875 Mur ligase family, glutamate ligase domain HDN1F_06740 PF08478 POTRA domain, FtsQ-type HDN1F_06740 PF03799 Cell division protein FtsQ HDN1F_06750 PF02491 SHS2 domain inserted in FTSA HDN1F_06760 PF00091 Tubulin/FtsZ family, GTPase domain HDN1F_06760 PF12327 FtsZ family, C-terminal domain HDN1F_06770 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HDN1F_06790 PF07517 SecA DEAD-like domain HDN1F_06790 PF01043 SecA preprotein cross-linking domain HDN1F_06790 PF02810 SEC-C motif HDN1F_06790 PF07516 SecA Wing and Scaffold domain HDN1F_06800 PF01960 ArgJ family HDN1F_06810 PF00293 NUDIX domain HDN1F_06850 PF16363 GDP-mannose 4,6 dehydratase HDN1F_06860 PF04321 RmlD substrate binding domain HDN1F_06870 PF00483 Nucleotidyl transferase HDN1F_06880 PF16363 GDP-mannose 4,6 dehydratase HDN1F_06890 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HDN1F_06900 PF12848 ABC transporter HDN1F_06900 PF00005 ABC transporter HDN1F_06920 PF02350 UDP-N-acetylglucosamine 2-epimerase HDN1F_06960 PF00005 ABC transporter HDN1F_06990 PF10634 Fe2+ transport protein HDN1F_07010 PF13473 Cupredoxin-like domain HDN1F_07040 PF01169 Uncharacterized protein family UPF0016 HDN1F_07050 PF00117 Glutamine amidotransferase class-I HDN1F_07060 PF00270 DEAD/DEAH box helicase HDN1F_07060 PF09369 Domain of unknown function (DUF1998) HDN1F_07060 PF00271 Helicase conserved C-terminal domain HDN1F_07070 PF00271 Helicase conserved C-terminal domain HDN1F_07070 PF00176 SNF2 family N-terminal domain HDN1F_07100 PF02661 Fic/DOC family HDN1F_07100 PF12728 Helix-turn-helix domain HDN1F_07180 PF13356 Arm DNA-binding domain HDN1F_07180 PF00589 Phage integrase family HDN1F_07210 PF04362 Bacterial Fe(2+) trafficking HDN1F_07220 PF00730 HhH-GPD superfamily base excision DNA repair protein HDN1F_07220 PF14815 NUDIX domain HDN1F_07220 PF10576 Iron-sulfur binding domain of endonuclease III HDN1F_07220 PF00633 Helix-hairpin-helix motif HDN1F_07230 PF00072 Response regulator receiver domain HDN1F_07230 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_07230 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_07230 PF00672 HAMP domain HDN1F_07230 PF01627 Hpt domain HDN1F_07240 PF00475 Imidazoleglycerol-phosphate dehydratase HDN1F_07250 PF00117 Glutamine amidotransferase class-I HDN1F_07260 PF00977 Histidine biosynthesis protein HDN1F_07270 PF00977 Histidine biosynthesis protein HDN1F_07280 PF13180 PDZ domain HDN1F_07280 PF03572 Peptidase family S41 HDN1F_07290 PF01551 Peptidase family M23 HDN1F_07300 PF01676 Metalloenzyme superfamily HDN1F_07300 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HDN1F_07310 PF00581 Rhodanese-like domain HDN1F_07320 PF00462 Glutaredoxin HDN1F_07330 PF02556 Preprotein translocase subunit SecB HDN1F_07340 PF00588 SpoU rRNA Methylase family HDN1F_07370 PF03951 Glutamine synthetase, beta-Grasp domain HDN1F_07370 PF00120 Glutamine synthetase, catalytic domain HDN1F_07380 PF00581 Rhodanese-like domain HDN1F_07380 PF01206 Sulfurtransferase TusA HDN1F_07430 PF02384 N-6 DNA Methylase HDN1F_07440 PF01420 Type I restriction modification DNA specificity domain HDN1F_07450 PF17761 DUF1016 N-terminal domain HDN1F_07450 PF06250 YhcG PDDEXK nuclease domain HDN1F_07460 PF18766 SWI2/SNF2 ATPase HDN1F_07460 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HDN1F_07460 PF11867 Domain of unknown function (DUF3387) HDN1F_07470 PF00672 HAMP domain HDN1F_07470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_07510 PF01039 Carboxyl transferase domain HDN1F_07520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HDN1F_07520 PF02785 Biotin carboxylase C-terminal domain HDN1F_07520 PF00289 Biotin carboxylase, N-terminal domain HDN1F_07550 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HDN1F_07550 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HDN1F_07560 PF03061 Thioesterase superfamily HDN1F_07560 PF00571 CBS domain HDN1F_07560 PF07085 DRTGG domain HDN1F_07560 PF00392 Bacterial regulatory proteins, gntR family HDN1F_07580 PF00271 Helicase conserved C-terminal domain HDN1F_07580 PF00270 DEAD/DEAH box helicase HDN1F_07580 PF18019 HD domain HDN1F_07610 PF09344 CT1975-like protein HDN1F_07620 PF09704 CRISPR-associated protein (Cas_Cas5) HDN1F_07650 PF01867 CRISPR associated protein Cas1 HDN1F_07660 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) HDN1F_07670 PF01510 N-acetylmuramoyl-L-alanine amidase HDN1F_07690 PF00456 Transketolase, thiamine diphosphate binding domain HDN1F_07690 PF17831 Pyruvate dehydrogenase E1 component middle domain HDN1F_07700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HDN1F_07700 PF00364 Biotin-requiring enzyme HDN1F_07700 PF02817 e3 binding domain HDN1F_07780 PF00067 Cytochrome P450 HDN1F_07790 PF00563 EAL domain HDN1F_07790 PF01590 GAF domain HDN1F_07790 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_07790 PF00360 Phytochrome region HDN1F_07800 PF00694 Aconitase C-terminal domain HDN1F_07800 PF00330 Aconitase family (aconitate hydratase) HDN1F_07830 PF04536 TPM domain HDN1F_07840 PF04011 LemA family HDN1F_07870 PF17820 PDZ domain HDN1F_07870 PF02163 Peptidase family M50 HDN1F_07890 PF00916 Sulfate permease family HDN1F_07890 PF01740 STAS domain HDN1F_07910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_07910 PF12729 Four helix bundle sensory module for signal transduction HDN1F_07910 PF00672 HAMP domain HDN1F_07920 PF03150 Di-haem cytochrome c peroxidase HDN1F_07950 PF00174 Oxidoreductase molybdopterin binding domain HDN1F_07960 PF01794 Ferric reductase like transmembrane component HDN1F_08010 PF00155 Aminotransferase class I and II HDN1F_08020 PF04315 Elongation factor P hydroxylase HDN1F_08030 PF01678 Diaminopimelate epimerase HDN1F_08040 PF02540 NAD synthase HDN1F_08050 PF00258 Flavodoxin HDN1F_08050 PF00667 FAD binding domain HDN1F_08050 PF00175 Oxidoreductase NAD-binding domain HDN1F_08070 PF03309 Type III pantothenate kinase HDN1F_08080 PF02237 Biotin protein ligase C terminal domain HDN1F_08080 PF03099 Biotin/lipoate A/B protein ligase family HDN1F_08110 PF12833 Helix-turn-helix domain HDN1F_08110 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_08130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_08130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_08130 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_08150 PF00155 Aminotransferase class I and II HDN1F_08160 PF17113 Regulatory signalling modulator protein AmpE HDN1F_08160 PF03186 CobD/Cbib protein HDN1F_08180 PF02654 Cobalamin-5-phosphate synthase HDN1F_08200 PF02277 Phosphoribosyltransferase HDN1F_08210 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HDN1F_08220 PF01923 Cobalamin adenosyltransferase HDN1F_08230 PF08546 Ketopantoate reductase PanE/ApbA C terminal HDN1F_08230 PF02558 Ketopantoate reductase PanE/ApbA HDN1F_08240 PF00486 Transcriptional regulatory protein, C terminal HDN1F_08240 PF00072 Response regulator receiver domain HDN1F_08260 PF02867 Ribonucleotide reductase, barrel domain HDN1F_08260 PF08471 Class II vitamin B12-dependent ribonucleotide reductase HDN1F_08300 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_08330 PF00561 alpha/beta hydrolase fold HDN1F_08340 PF00271 Helicase conserved C-terminal domain HDN1F_08340 PF00176 SNF2 family N-terminal domain HDN1F_08370 PF17761 DUF1016 N-terminal domain HDN1F_08370 PF06250 YhcG PDDEXK nuclease domain HDN1F_08400 PF17761 DUF1016 N-terminal domain HDN1F_08400 PF06250 YhcG PDDEXK nuclease domain HDN1F_08460 PF00270 DEAD/DEAH box helicase HDN1F_08460 PF00271 Helicase conserved C-terminal domain HDN1F_08480 PF01425 Amidase HDN1F_08490 PF03989 DNA gyrase C-terminal domain, beta-propeller HDN1F_08490 PF00521 DNA gyrase/topoisomerase IV, subunit A HDN1F_08500 PF00107 Zinc-binding dehydrogenase HDN1F_08500 PF08240 Alcohol dehydrogenase GroES-like domain HDN1F_08510 PF00756 Putative esterase HDN1F_08520 PF03848 Tellurite resistance protein TehB HDN1F_08530 PF00085 Thioredoxin HDN1F_08560 PF01985 CRS1 / YhbY (CRM) domain HDN1F_08570 PF01728 FtsJ-like methyltransferase HDN1F_08580 PF01434 Peptidase family M41 HDN1F_08580 PF06480 FtsH Extracellular HDN1F_08580 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_08580 PF17862 AAA+ lid domain HDN1F_08590 PF00809 Pterin binding enzyme HDN1F_08600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HDN1F_08600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HDN1F_08600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HDN1F_08600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HDN1F_08610 PF00121 Triosephosphate isomerase HDN1F_08620 PF03840 Preprotein translocase SecG subunit HDN1F_08630 PF17384 RimP C-terminal SH3 domain HDN1F_08630 PF02576 RimP N-terminal domain HDN1F_08640 PF13184 NusA-like KH domain HDN1F_08640 PF00575 S1 RNA binding domain HDN1F_08640 PF08529 NusA N-terminal domain HDN1F_08650 PF08364 Bacterial translation initiation factor IF-2 associated region HDN1F_08650 PF11987 Translation-initiation factor 2 HDN1F_08650 PF04760 Translation initiation factor IF-2, N-terminal region HDN1F_08650 PF00009 Elongation factor Tu GTP binding domain HDN1F_08660 PF02033 Ribosome-binding factor A HDN1F_08670 PF16198 tRNA pseudouridylate synthase B C-terminal domain HDN1F_08670 PF09157 Pseudouridine synthase II TruB, C-terminal HDN1F_08670 PF01509 TruB family pseudouridylate synthase (N terminal domain) HDN1F_08680 PF00312 Ribosomal protein S15 HDN1F_08690 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HDN1F_08690 PF01138 3' exoribonuclease family, domain 1 HDN1F_08690 PF03725 3' exoribonuclease family, domain 2 HDN1F_08690 PF00575 S1 RNA binding domain HDN1F_08690 PF00013 KH domain HDN1F_08700 PF01852 START domain HDN1F_08710 PF08360 QacR-like protein, C-terminal region HDN1F_08710 PF00440 Bacterial regulatory proteins, tetR family HDN1F_08720 PF06144 DNA polymerase III, delta subunit HDN1F_08720 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HDN1F_08740 PF08264 Anticodon-binding domain of tRNA HDN1F_08740 PF13603 Leucyl-tRNA synthetase, Domain 2 HDN1F_08740 PF09334 tRNA synthetases class I (M) HDN1F_08740 PF00133 tRNA synthetases class I (I, L, M and V) HDN1F_08750 PF13419 Haloacid dehalogenase-like hydrolase HDN1F_08760 PF00795 Carbon-nitrogen hydrolase HDN1F_08770 PF00571 CBS domain HDN1F_08770 PF03471 Transporter associated domain HDN1F_08780 PF02130 Uncharacterized protein family UPF0054 HDN1F_08790 PF02562 PhoH-like protein HDN1F_08800 PF00919 Uncharacterized protein family UPF0004 HDN1F_08800 PF01938 TRAM domain HDN1F_08800 PF04055 Radical SAM superfamily HDN1F_08850 PF01521 Iron-sulphur cluster biosynthesis HDN1F_08860 PF04225 Opacity-associated protein A LysM-like domain HDN1F_08860 PF01551 Peptidase family M23 HDN1F_08870 PF00579 tRNA synthetases class I (W and Y) HDN1F_08870 PF01479 S4 domain HDN1F_08880 PF03279 Bacterial lipid A biosynthesis acyltransferase HDN1F_08900 PF01571 Aminomethyltransferase folate-binding domain HDN1F_08910 PF03937 Flavinator of succinate dehydrogenase HDN1F_08930 PF00890 FAD binding domain HDN1F_08930 PF02910 Fumarate reductase flavoprotein C-term HDN1F_08960 PF00135 Carboxylesterase family HDN1F_08970 PF01435 Peptidase family M48 HDN1F_08990 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_08990 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_09000 PF00108 Thiolase, N-terminal domain HDN1F_09000 PF02803 Thiolase, C-terminal domain HDN1F_09010 PF03707 Bacterial signalling protein N terminal repeat HDN1F_09010 PF00563 EAL domain HDN1F_09010 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_09050 PF00072 Response regulator receiver domain HDN1F_09050 PF00486 Transcriptional regulatory protein, C terminal HDN1F_09060 PF00384 Molybdopterin oxidoreductase HDN1F_09060 PF01568 Molydopterin dinucleotide binding domain HDN1F_09060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HDN1F_09110 PF00595 PDZ domain HDN1F_09150 PF00563 EAL domain HDN1F_09150 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_09150 PF08448 PAS fold HDN1F_09170 PF08502 LeuA allosteric (dimerisation) domain HDN1F_09170 PF00682 HMGL-like HDN1F_09190 PF00583 Acetyltransferase (GNAT) family HDN1F_09200 PF13439 Glycosyltransferase Family 4 HDN1F_09200 PF00534 Glycosyl transferases group 1 HDN1F_09210 PF00009 Elongation factor Tu GTP binding domain HDN1F_09210 PF03144 Elongation factor Tu domain 2 HDN1F_09210 PF16658 Class II release factor RF3, C-terminal domain HDN1F_09220 PF00970 Oxidoreductase FAD-binding domain HDN1F_09220 PF00175 Oxidoreductase NAD-binding domain HDN1F_09220 PF00111 2Fe-2S iron-sulfur cluster binding domain HDN1F_09230 PF01370 NAD dependent epimerase/dehydratase family HDN1F_09230 PF08338 Domain of unknown function (DUF1731) HDN1F_09240 PF02817 e3 binding domain HDN1F_09240 PF00364 Biotin-requiring enzyme HDN1F_09240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HDN1F_09250 PF02779 Transketolase, pyrimidine binding domain HDN1F_09250 PF02780 Transketolase, C-terminal domain HDN1F_09260 PF00676 Dehydrogenase E1 component HDN1F_09270 PF13426 PAS domain HDN1F_09270 PF08447 PAS fold HDN1F_09270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_09280 PF14760 Rnk N-terminus HDN1F_09280 PF01272 Transcription elongation factor, GreA/GreB, C-term HDN1F_09290 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HDN1F_09290 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HDN1F_09310 PF08281 Sigma-70, region 4 HDN1F_09310 PF04542 Sigma-70 region 2 HDN1F_09320 PF03872 Anti sigma-E protein RseA, N-terminal domain HDN1F_09320 PF03873 Anti sigma-E protein RseA, C-terminal domain HDN1F_09330 PF17188 MucB/RseB C-terminal domain HDN1F_09330 PF03888 MucB/RseB N-terminal domain HDN1F_09340 PF06421 GTP-binding protein LepA C-terminus HDN1F_09340 PF03144 Elongation factor Tu domain 2 HDN1F_09340 PF00009 Elongation factor Tu GTP binding domain HDN1F_09340 PF00679 Elongation factor G C-terminus HDN1F_09350 PF10502 Signal peptidase, peptidase S26 HDN1F_09370 PF14622 Ribonuclease-III-like HDN1F_09370 PF00035 Double-stranded RNA binding motif HDN1F_09380 PF07650 KH domain HDN1F_09380 PF01926 50S ribosome-binding GTPase HDN1F_09390 PF02565 Recombination protein O C terminal HDN1F_09390 PF11967 Recombination protein O N terminal HDN1F_09400 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HDN1F_09410 PF01648 4'-phosphopantetheinyl transferase superfamily HDN1F_09420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_09420 PF00672 HAMP domain HDN1F_09420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_09420 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_09420 PF01627 Hpt domain HDN1F_09420 PF00072 Response regulator receiver domain HDN1F_09430 PF00291 Pyridoxal-phosphate dependent enzyme HDN1F_09460 PF05958 tRNA (Uracil-5-)-methyltransferase HDN1F_09470 PF13291 ACT domain HDN1F_09470 PF04607 Region found in RelA / SpoT proteins HDN1F_09470 PF02824 TGS domain HDN1F_09480 PF00994 Probable molybdopterin binding domain HDN1F_09490 PF00994 Probable molybdopterin binding domain HDN1F_09490 PF03454 MoeA C-terminal region (domain IV) HDN1F_09490 PF03453 MoeA N-terminal region (domain I and II) HDN1F_09550 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HDN1F_09550 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HDN1F_09550 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HDN1F_09570 PF00892 EamA-like transporter family HDN1F_09580 PF03922 OmpW family HDN1F_09610 PF00873 AcrB/AcrD/AcrF family HDN1F_09620 PF00293 NUDIX domain HDN1F_09630 PF06853 Protein of unknown function (DUF1249) HDN1F_09640 PF00149 Calcineurin-like phosphoesterase HDN1F_09650 PF00291 Pyridoxal-phosphate dependent enzyme HDN1F_09660 PF02627 Carboxymuconolactone decarboxylase family HDN1F_09670 PF00043 Glutathione S-transferase, C-terminal domain HDN1F_09670 PF02798 Glutathione S-transferase, N-terminal domain HDN1F_09680 PF11953 Domain of unknown function (DUF3470) HDN1F_09680 PF00037 4Fe-4S binding domain HDN1F_09690 PF00488 MutS domain V HDN1F_09690 PF05192 MutS domain III HDN1F_09690 PF05190 MutS family domain IV HDN1F_09690 PF05188 MutS domain II HDN1F_09690 PF01624 MutS domain I HDN1F_09710 PF12323 Helix-turn-helix domain HDN1F_09710 PF01385 Probable transposase HDN1F_09710 PF07282 Putative transposase DNA-binding domain HDN1F_09720 PF02464 Competence-damaged protein HDN1F_09730 PF00154 recA bacterial DNA recombination protein HDN1F_09740 PF03459 TOBE domain HDN1F_09740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_09760 PF00528 Binding-protein-dependent transport system inner membrane component HDN1F_09770 PF12857 TOBE-like domain HDN1F_09770 PF00005 ABC transporter HDN1F_09780 PF07715 TonB-dependent Receptor Plug Domain HDN1F_09780 PF00593 TonB dependent receptor HDN1F_09800 PF00440 Bacterial regulatory proteins, tetR family HDN1F_09810 PF00106 short chain dehydrogenase HDN1F_09820 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_09820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HDN1F_09840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_09840 PF03459 TOBE domain HDN1F_09850 PF04055 Radical SAM superfamily HDN1F_09850 PF06969 HemN C-terminal domain HDN1F_09860 PF00027 Cyclic nucleotide-binding domain HDN1F_09860 PF13545 Crp-like helix-turn-helix domain HDN1F_09880 PF01820 D-ala D-ala ligase N-terminus HDN1F_09880 PF07478 D-ala D-ala ligase C-terminus HDN1F_09900 PF07690 Major Facilitator Superfamily HDN1F_09910 PF00892 EamA-like transporter family HDN1F_09940 PF00501 AMP-binding enzyme HDN1F_09950 PF14765 Polyketide synthase dehydratase HDN1F_09950 PF08990 Erythronolide synthase docking HDN1F_09950 PF08240 Alcohol dehydrogenase GroES-like domain HDN1F_09950 PF00698 Acyl transferase domain HDN1F_09950 PF00550 Phosphopantetheine attachment site HDN1F_09950 PF08659 KR domain HDN1F_09950 PF09277 Erythronolide synthase, docking HDN1F_09950 PF16197 Ketoacyl-synthetase C-terminal extension HDN1F_09950 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_09950 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_09960 PF16197 Ketoacyl-synthetase C-terminal extension HDN1F_09960 PF08990 Erythronolide synthase docking HDN1F_09960 PF00698 Acyl transferase domain HDN1F_09960 PF00550 Phosphopantetheine attachment site HDN1F_09960 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_09960 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_09960 PF08659 KR domain HDN1F_09970 PF00550 Phosphopantetheine attachment site HDN1F_09970 PF13193 AMP-binding enzyme C-terminal domain HDN1F_09970 PF00668 Condensation domain HDN1F_09970 PF08659 KR domain HDN1F_09970 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_09970 PF00501 AMP-binding enzyme HDN1F_09970 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_09970 PF14765 Polyketide synthase dehydratase HDN1F_09970 PF16197 Ketoacyl-synthetase C-terminal extension HDN1F_10050 PF00082 Subtilase family HDN1F_10050 PF04151 Bacterial pre-peptidase C-terminal domain HDN1F_10070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HDN1F_10070 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_10070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HDN1F_10080 PF02803 Thiolase, C-terminal domain HDN1F_10080 PF00108 Thiolase, N-terminal domain HDN1F_10110 PF02515 CoA-transferase family III HDN1F_10130 PF03795 YCII-related domain HDN1F_10140 PF04279 Intracellular septation protein A HDN1F_10160 PF02811 PHP domain HDN1F_10170 PF01300 Telomere recombination HDN1F_10180 PF02616 Segregation and condensation protein ScpA HDN1F_10190 PF04079 Segregation and condensation complex subunit ScpB HDN1F_10200 PF00849 RNA pseudouridylate synthase HDN1F_10200 PF01479 S4 domain HDN1F_10220 PF08448 PAS fold HDN1F_10220 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_10230 PF00106 short chain dehydrogenase HDN1F_10240 PF03989 DNA gyrase C-terminal domain, beta-propeller HDN1F_10240 PF00521 DNA gyrase/topoisomerase IV, subunit A HDN1F_10250 PF00266 Aminotransferase class-V HDN1F_10260 PF01817 Chorismate mutase type II HDN1F_10260 PF01842 ACT domain HDN1F_10260 PF00800 Prephenate dehydratase HDN1F_10270 PF00155 Aminotransferase class I and II HDN1F_10280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HDN1F_10290 PF02224 Cytidylate kinase HDN1F_10300 PF00575 S1 RNA binding domain HDN1F_10310 PF00106 short chain dehydrogenase HDN1F_10320 PF02321 Outer membrane efflux protein HDN1F_10340 PF11818 C-terminal domain of tail specific protease (DUF3340) HDN1F_10340 PF17804 Tail specific protease N-terminal domain HDN1F_10340 PF03572 Peptidase family S41 HDN1F_10340 PF00595 PDZ domain HDN1F_10390 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_10390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_10390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_10400 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_10400 PF12833 Helix-turn-helix domain HDN1F_10410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_10410 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_10410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_10420 PF00216 Bacterial DNA-binding protein HDN1F_10440 PF18073 Rubredoxin metal binding domain HDN1F_10450 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HDN1F_10470 PF05494 MlaC protein HDN1F_10480 PF00953 Glycosyl transferase family 4 HDN1F_10490 PF02397 Bacterial sugar transferase HDN1F_10500 PF02719 Polysaccharide biosynthesis protein HDN1F_10510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HDN1F_10510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HDN1F_10510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HDN1F_10510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HDN1F_10520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HDN1F_10520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HDN1F_10520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HDN1F_10550 PF17757 UvrB interaction domain HDN1F_10550 PF12344 Ultra-violet resistance protein B HDN1F_10550 PF02151 UvrB/uvrC motif HDN1F_10550 PF04851 Type III restriction enzyme, res subunit HDN1F_10550 PF00271 Helicase conserved C-terminal domain HDN1F_10560 PF01370 NAD dependent epimerase/dehydratase family HDN1F_10570 PF00707 Translation initiation factor IF-3, C-terminal domain HDN1F_10570 PF05198 Translation initiation factor IF-3, N-terminal domain HDN1F_10580 PF01632 Ribosomal protein L35 HDN1F_10590 PF00453 Ribosomal protein L20 HDN1F_10600 PF01409 tRNA synthetases class II core domain (F) HDN1F_10600 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HDN1F_10610 PF03483 B3/4 domain HDN1F_10610 PF03147 Ferredoxin-fold anticodon binding domain HDN1F_10610 PF01588 Putative tRNA binding domain HDN1F_10610 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HDN1F_10610 PF03484 tRNA synthetase B5 domain HDN1F_10620 PF00216 Bacterial DNA-binding protein HDN1F_10630 PF13411 MerR HTH family regulatory protein HDN1F_10680 PF00501 AMP-binding enzyme HDN1F_10680 PF13193 AMP-binding enzyme C-terminal domain HDN1F_10690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HDN1F_10690 PF00289 Biotin carboxylase, N-terminal domain HDN1F_10690 PF02785 Biotin carboxylase C-terminal domain HDN1F_10690 PF00364 Biotin-requiring enzyme HDN1F_10700 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_10710 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_10710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_10710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_10720 PF01039 Carboxyl transferase domain HDN1F_10720 PF17848 Acetyl-coA carboxylase zinc finger domain HDN1F_10760 PF17932 Tetracyclin repressor-like, C-terminal domain HDN1F_10760 PF00440 Bacterial regulatory proteins, tetR family HDN1F_10820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HDN1F_10850 PF02558 Ketopantoate reductase PanE/ApbA HDN1F_10850 PF08546 Ketopantoate reductase PanE/ApbA C terminal HDN1F_10860 PF13378 Enolase C-terminal domain-like HDN1F_10870 PF01513 ATP-NAD kinase HDN1F_10880 PF00149 Calcineurin-like phosphoesterase HDN1F_10890 PF00563 EAL domain HDN1F_10890 PF13188 PAS domain HDN1F_10890 PF03707 Bacterial signalling protein N terminal repeat HDN1F_10890 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_10920 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HDN1F_10920 PF11940 Domain of unknown function (DUF3458) Ig-like fold HDN1F_10920 PF01433 Peptidase family M1 domain HDN1F_10930 PF07044 Protein of unknown function (DUF1329) HDN1F_10950 PF03176 MMPL family HDN1F_11000 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_11000 PF17151 Periplasmic sensor domain HDN1F_11020 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_11030 PF00106 short chain dehydrogenase HDN1F_11040 PF16363 GDP-mannose 4,6 dehydratase HDN1F_11050 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family HDN1F_11070 PF00171 Aldehyde dehydrogenase family HDN1F_11080 PF05199 GMC oxidoreductase HDN1F_11080 PF00732 GMC oxidoreductase HDN1F_11090 PF00440 Bacterial regulatory proteins, tetR family HDN1F_11100 PF00067 Cytochrome P450 HDN1F_11130 PF00082 Subtilase family HDN1F_11140 PF00437 Type II/IV secretion system protein HDN1F_11160 PF02631 RecX family HDN1F_11180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HDN1F_11180 PF01411 tRNA synthetases class II (A) HDN1F_11180 PF02272 DHHA1 domain HDN1F_11190 PF13840 ACT domain HDN1F_11190 PF01842 ACT domain HDN1F_11190 PF00696 Amino acid kinase family HDN1F_11200 PF02599 Global regulator protein family HDN1F_11250 PF00313 'Cold-shock' DNA-binding domain HDN1F_11270 PF03793 PASTA domain HDN1F_11270 PF00069 Protein kinase domain HDN1F_11280 PF00762 Ferrochelatase HDN1F_11290 PF00578 AhpC/TSA family HDN1F_11300 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HDN1F_11300 PF01694 Rhomboid family HDN1F_11310 PF04231 Endonuclease I HDN1F_11350 PF02796 Helix-turn-helix domain of resolvase HDN1F_11350 PF00239 Resolvase, N terminal domain HDN1F_11400 PF00072 Response regulator receiver domain HDN1F_11400 PF01584 CheW-like domain HDN1F_11410 PF03705 CheR methyltransferase, all-alpha domain HDN1F_11410 PF01739 CheR methyltransferase, SAM binding domain HDN1F_11420 PF00460 Flagella basal body rod protein HDN1F_11430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HDN1F_11430 PF00460 Flagella basal body rod protein HDN1F_11440 PF03963 Flagellar hook capping protein - N-terminal region HDN1F_11450 PF07559 Flagellar basal body protein FlaE HDN1F_11450 PF00460 Flagella basal body rod protein HDN1F_11450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HDN1F_11560 PF00665 Integrase core domain HDN1F_11600 PF12161 HsdM N-terminal domain HDN1F_11600 PF02384 N-6 DNA Methylase HDN1F_11750 PF12561 ToxR activated gene A lipoprotein domain HDN1F_11750 PF00041 Fibronectin type III domain HDN1F_11760 PF00881 Nitroreductase family HDN1F_11790 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_11820 PF06974 Protein of unknown function (DUF1298) HDN1F_11820 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HDN1F_11830 PF13193 AMP-binding enzyme C-terminal domain HDN1F_11830 PF00501 AMP-binding enzyme HDN1F_11840 PF02769 AIR synthase related protein, C-terminal domain HDN1F_11840 PF00586 AIR synthase related protein, N-terminal domain HDN1F_11850 PF07732 Multicopper oxidase HDN1F_11870 PF13091 PLD-like domain HDN1F_11870 PF13396 Phospholipase_D-nuclease N-terminal HDN1F_11930 PF00403 Heavy-metal-associated domain HDN1F_11950 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HDN1F_11950 PF12801 4Fe-4S binding domain HDN1F_11950 PF13746 4Fe-4S dicluster domain HDN1F_11960 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_11960 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HDN1F_11990 PF00115 Cytochrome C and Quinol oxidase polypeptide I HDN1F_12010 PF18125 RlmM ferredoxin-like domain HDN1F_12010 PF01728 FtsJ-like methyltransferase HDN1F_12020 PF07690 Major Facilitator Superfamily HDN1F_12030 PF01206 Sulfurtransferase TusA HDN1F_12050 PF00199 Catalase HDN1F_12050 PF06628 Catalase-related immune-responsive HDN1F_12290 PF04717 Type VI secretion system, phage-baseplate injector HDN1F_12290 PF16671 Actin cross-linking domain HDN1F_12300 PF00916 Sulfate permease family HDN1F_12300 PF01740 STAS domain HDN1F_12330 PF00899 ThiF family HDN1F_12360 PF03350 Uncharacterized protein family, UPF0114 HDN1F_12380 PF01554 MatE HDN1F_12390 PF03449 Transcription elongation factor, N-terminal HDN1F_12390 PF01272 Transcription elongation factor, GreA/GreB, C-term HDN1F_12400 PF00563 EAL domain HDN1F_12400 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_12400 PF03707 Bacterial signalling protein N terminal repeat HDN1F_12410 PF00440 Bacterial regulatory proteins, tetR family HDN1F_12460 PF00672 HAMP domain HDN1F_12460 PF00211 Adenylate and Guanylate cyclase catalytic domain HDN1F_12480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HDN1F_12480 PF00460 Flagella basal body rod protein HDN1F_12490 PF00460 Flagella basal body rod protein HDN1F_12490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HDN1F_12500 PF02107 Flagellar L-ring protein HDN1F_12510 PF02119 Flagellar P-ring protein HDN1F_12520 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HDN1F_12520 PF10135 Rod binding protein HDN1F_12530 PF07196 Flagellin hook IN motif HDN1F_12530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HDN1F_12550 PF08884 Flagellin D3 domain HDN1F_12550 PF00700 Bacterial flagellin C-terminal helical region HDN1F_12550 PF00669 Bacterial flagellin N-terminal helical region HDN1F_12580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_12580 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_12580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_12590 PF13193 AMP-binding enzyme C-terminal domain HDN1F_12590 PF00501 AMP-binding enzyme HDN1F_12620 PF00881 Nitroreductase family HDN1F_12640 PF01209 ubiE/COQ5 methyltransferase family HDN1F_12650 PF14579 Helix-hairpin-helix motif HDN1F_12650 PF02811 PHP domain HDN1F_12650 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HDN1F_12650 PF01336 OB-fold nucleic acid binding domain HDN1F_12650 PF07733 Bacterial DNA polymerase III alpha NTPase domain HDN1F_12680 PF01384 Phosphate transporter family HDN1F_12690 PF00672 HAMP domain HDN1F_12690 PF02203 Tar ligand binding domain homologue HDN1F_12690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_12720 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_12720 PF01627 Hpt domain HDN1F_12720 PF00072 Response regulator receiver domain HDN1F_12720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_12720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_12720 PF00672 HAMP domain HDN1F_12730 PF09924 Uncharacterised conserved protein (DUF2156) HDN1F_12730 PF03706 Lysylphosphatidylglycerol synthase TM region HDN1F_12750 PF04349 Periplasmic glucan biosynthesis protein, MdoG HDN1F_12760 PF04349 Periplasmic glucan biosynthesis protein, MdoG HDN1F_12800 PF10996 Beta-Casp domain HDN1F_12800 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HDN1F_12800 PF00753 Metallo-beta-lactamase superfamily HDN1F_12820 PF00582 Universal stress protein family HDN1F_12850 PF08272 Topoisomerase I zinc-ribbon-like HDN1F_12850 PF01751 Toprim domain HDN1F_12850 PF01131 DNA topoisomerase HDN1F_12850 PF01396 Topoisomerase DNA binding C4 zinc finger HDN1F_12870 PF00717 Peptidase S24-like HDN1F_12870 PF01726 LexA DNA binding domain HDN1F_12900 PF00933 Glycosyl hydrolase family 3 N terminal domain HDN1F_12930 PF02559 CarD-like/TRCF domain HDN1F_12930 PF00271 Helicase conserved C-terminal domain HDN1F_12930 PF03461 TRCF domain HDN1F_12930 PF00270 DEAD/DEAH box helicase HDN1F_12930 PF17757 UvrB interaction domain HDN1F_12950 PF00085 Thioredoxin HDN1F_12960 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_12960 PF00360 Phytochrome region HDN1F_12960 PF01590 GAF domain HDN1F_12960 PF00563 EAL domain HDN1F_12970 PF13185 GAF domain HDN1F_12970 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_12980 PF02146 Sir2 family HDN1F_13010 PF00873 AcrB/AcrD/AcrF family HDN1F_13040 PF00350 Dynamin family HDN1F_13050 PF00350 Dynamin family HDN1F_13060 PF00350 Dynamin family HDN1F_13070 PF00578 AhpC/TSA family HDN1F_13070 PF10417 C-terminal domain of 1-Cys peroxiredoxin HDN1F_13080 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_13080 PF13192 Thioredoxin domain HDN1F_13100 PF00155 Aminotransferase class I and II HDN1F_13120 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_13120 PF00072 Response regulator receiver domain HDN1F_13200 PF00072 Response regulator receiver domain HDN1F_13200 PF00196 Bacterial regulatory proteins, luxR family HDN1F_13210 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HDN1F_13210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_13210 PF00672 HAMP domain HDN1F_13210 PF07730 Histidine kinase HDN1F_13220 PF07690 Major Facilitator Superfamily HDN1F_13230 PF07690 Major Facilitator Superfamily HDN1F_13240 PF14710 Respiratory nitrate reductase alpha N-terminal HDN1F_13240 PF01568 Molydopterin dinucleotide binding domain HDN1F_13240 PF00384 Molybdopterin oxidoreductase HDN1F_13250 PF13247 4Fe-4S dicluster domain HDN1F_13250 PF14711 Respiratory nitrate reductase beta C-terminal HDN1F_13260 PF02613 Nitrate reductase delta subunit HDN1F_13270 PF02665 Nitrate reductase gamma subunit HDN1F_13280 PF09312 SurA N-terminal domain HDN1F_13290 PF06463 Molybdenum Cofactor Synthesis C HDN1F_13290 PF04055 Radical SAM superfamily HDN1F_13300 PF00484 Carbonic anhydrase HDN1F_13310 PF00072 Response regulator receiver domain HDN1F_13310 PF00486 Transcriptional regulatory protein, C terminal HDN1F_13320 PF08918 PhoQ Sensor HDN1F_13320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_13330 PF00672 HAMP domain HDN1F_13330 PF01627 Hpt domain HDN1F_13330 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_13330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_13330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_13330 PF00072 Response regulator receiver domain HDN1F_13350 PF08443 RimK-like ATP-grasp domain HDN1F_13350 PF18030 RimK PreATP-grasp domain HDN1F_13360 PF08443 RimK-like ATP-grasp domain HDN1F_13360 PF18030 RimK PreATP-grasp domain HDN1F_13370 PF00899 ThiF family HDN1F_13400 PF02311 AraC-like ligand binding domain HDN1F_13400 PF12833 Helix-turn-helix domain HDN1F_13410 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_13410 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_13420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HDN1F_13420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HDN1F_13470 PF00350 Dynamin family HDN1F_13480 PF00929 Exonuclease HDN1F_13480 PF13307 Helicase C-terminal domain HDN1F_13480 PF04851 Type III restriction enzyme, res subunit HDN1F_13510 PF00012 Hsp70 protein HDN1F_13520 PF00012 Hsp70 protein HDN1F_13530 PF00155 Aminotransferase class I and II HDN1F_13540 PF01641 SelR domain HDN1F_13550 PF00255 Glutathione peroxidase HDN1F_13570 PF03975 CheD chemotactic sensory transduction HDN1F_13580 PF01339 CheB methylesterase HDN1F_13580 PF00072 Response regulator receiver domain HDN1F_13590 PF03705 CheR methyltransferase, all-alpha domain HDN1F_13590 PF01739 CheR methyltransferase, SAM binding domain HDN1F_13600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_13600 PF00672 HAMP domain HDN1F_13600 PF02743 Cache domain HDN1F_13610 PF02203 Tar ligand binding domain homologue HDN1F_13610 PF00672 HAMP domain HDN1F_13610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_13650 PF05193 Peptidase M16 inactive domain HDN1F_13650 PF00675 Insulinase (Peptidase family M16) HDN1F_13650 PF08367 Peptidase M16C associated HDN1F_13690 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HDN1F_13700 PF01804 Penicillin amidase HDN1F_13710 PF02515 CoA-transferase family III HDN1F_13720 PF00027 Cyclic nucleotide-binding domain HDN1F_13720 PF13545 Crp-like helix-turn-helix domain HDN1F_13770 PF00270 DEAD/DEAH box helicase HDN1F_13770 PF13307 Helicase C-terminal domain HDN1F_13770 PF06733 DEAD_2 HDN1F_13780 PF00440 Bacterial regulatory proteins, tetR family HDN1F_13810 PF18030 RimK PreATP-grasp domain HDN1F_13810 PF08443 RimK-like ATP-grasp domain HDN1F_13820 PF00271 Helicase conserved C-terminal domain HDN1F_13820 PF12137 RNA polymerase recycling family C-terminal HDN1F_13820 PF00176 SNF2 family N-terminal domain HDN1F_13820 PF18339 RapA N-terminal Tudor like domain 1 HDN1F_13820 PF18337 RapA N-terminal Tudor like domain HDN1F_13830 PF00135 Carboxylesterase family HDN1F_13840 PF00348 Polyprenyl synthetase HDN1F_13850 PF01261 Xylose isomerase-like TIM barrel HDN1F_13860 PF02664 S-Ribosylhomocysteinase (LuxS) HDN1F_13870 PF01761 3-dehydroquinate synthase HDN1F_13920 PF06965 Na+/H+ antiporter 1 HDN1F_13940 PF13520 Amino acid permease HDN1F_13950 PF03109 ABC1 family HDN1F_13970 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_14000 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HDN1F_14010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HDN1F_14010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HDN1F_14020 PF16123 Hydroxyacylglutathione hydrolase C-terminus HDN1F_14020 PF00753 Metallo-beta-lactamase superfamily HDN1F_14040 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_14040 PF09308 LuxQ, periplasmic HDN1F_14040 PF00072 Response regulator receiver domain HDN1F_14040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_14090 PF00486 Transcriptional regulatory protein, C terminal HDN1F_14090 PF00072 Response regulator receiver domain HDN1F_14100 PF00672 HAMP domain HDN1F_14100 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_14170 PF18030 RimK PreATP-grasp domain HDN1F_14170 PF08443 RimK-like ATP-grasp domain HDN1F_14180 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HDN1F_14180 PF14572 Phosphoribosyl synthetase-associated domain HDN1F_14190 PF02885 Glycosyl transferase family, helical bundle domain HDN1F_14190 PF00591 Glycosyl transferase family, a/b domain HDN1F_14190 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HDN1F_14210 PF00034 Cytochrome c HDN1F_14210 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HDN1F_14210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_14230 PF03109 ABC1 family HDN1F_14240 PF00909 Ammonium Transporter Family HDN1F_14250 PF00543 Nitrogen regulatory protein P-II HDN1F_14270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_14270 PF12806 Acetyl-CoA dehydrogenase C-terminal like HDN1F_14270 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_14270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_14290 PF01230 HIT domain HDN1F_14300 PF13718 GNAT acetyltransferase 2 HDN1F_14300 PF08351 Domain of unknown function (DUF1726) HDN1F_14300 PF17176 tRNA-binding domain HDN1F_14300 PF05127 Helicase HDN1F_14310 PF02583 Metal-sensitive transcriptional repressor HDN1F_14320 PF02698 DUF218 domain HDN1F_14330 PF12794 Mechanosensitive ion channel inner membrane domain 1 HDN1F_14330 PF12795 Mechanosensitive ion channel porin domain HDN1F_14330 PF00924 Mechanosensitive ion channel HDN1F_14350 PF12806 Acetyl-CoA dehydrogenase C-terminal like HDN1F_14350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_14350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_14350 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_14370 PF02706 Chain length determinant protein HDN1F_14370 PF13614 AAA domain HDN1F_14370 PF13807 G-rich domain on putative tyrosine kinase HDN1F_14410 PF01229 Glycosyl hydrolases family 39 HDN1F_14430 PF00535 Glycosyl transferase family 2 HDN1F_14440 PF03808 Glycosyl transferase WecB/TagA/CpsF family HDN1F_14450 PF02397 Bacterial sugar transferase HDN1F_14460 PF04408 Helicase associated domain (HA2) HDN1F_14460 PF00270 DEAD/DEAH box helicase HDN1F_14460 PF08482 ATP-dependent helicase C-terminal HDN1F_14460 PF00271 Helicase conserved C-terminal domain HDN1F_14500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_14500 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_14500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_14510 PF00072 Response regulator receiver domain HDN1F_14510 PF00486 Transcriptional regulatory protein, C terminal HDN1F_14530 PF04055 Radical SAM superfamily HDN1F_14540 PF00743 Flavin-binding monooxygenase-like HDN1F_14550 PF06974 Protein of unknown function (DUF1298) HDN1F_14550 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HDN1F_14560 PF00893 Small Multidrug Resistance protein HDN1F_14570 PF03253 Urea transporter HDN1F_14600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_14600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_14600 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_14610 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_14610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_14610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_14630 PF16916 Dimerisation domain of Zinc Transporter HDN1F_14630 PF01545 Cation efflux family HDN1F_14640 PF00571 CBS domain HDN1F_14640 PF00478 IMP dehydrogenase / GMP reductase domain HDN1F_14690 PF02154 Flagellar motor switch protein FliM HDN1F_14690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HDN1F_14700 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HDN1F_14720 PF00813 FliP family HDN1F_14730 PF01313 Bacterial export proteins, family 3 HDN1F_14740 PF01311 Bacterial export proteins, family 1 HDN1F_14750 PF01312 FlhB HrpN YscU SpaS Family HDN1F_14760 PF00771 FHIPEP family HDN1F_14770 PF00448 SRP54-type protein, GTPase domain HDN1F_14780 PF10609 NUBPL iron-transfer P-loop NTPase HDN1F_14790 PF04539 Sigma-70 region 3 HDN1F_14790 PF04542 Sigma-70 region 2 HDN1F_14790 PF04545 Sigma-70, region 4 HDN1F_14800 PF00072 Response regulator receiver domain HDN1F_14810 PF04344 Chemotaxis phosphatase, CheZ HDN1F_14820 PF01584 CheW-like domain HDN1F_14820 PF01627 Hpt domain HDN1F_14820 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_14820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_14820 PF07194 P2 response regulator binding domain HDN1F_14830 PF01339 CheB methylesterase HDN1F_14830 PF00072 Response regulator receiver domain HDN1F_14840 PF01618 MotA/TolQ/ExbB proton channel family HDN1F_14850 PF00691 OmpA family HDN1F_14850 PF13677 Membrane MotB of proton-channel complex MotA/MotB HDN1F_14860 PF13614 AAA domain HDN1F_14880 PF01584 CheW-like domain HDN1F_14890 PF01584 CheW-like domain HDN1F_14910 PF01312 FlhB HrpN YscU SpaS Family HDN1F_14930 PF00005 ABC transporter HDN1F_14940 PF03379 CcmB protein HDN1F_14950 PF01578 Cytochrome C assembly protein HDN1F_14960 PF04995 Heme exporter protein D (CcmD) HDN1F_14970 PF03100 CcmE HDN1F_14980 PF09820 Predicted AAA-ATPase HDN1F_14980 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_15000 PF09820 Predicted AAA-ATPase HDN1F_15000 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_15020 PF01842 ACT domain HDN1F_15020 PF00551 Formyl transferase HDN1F_15030 PF02887 Pyruvate kinase, alpha/beta domain HDN1F_15030 PF00224 Pyruvate kinase, barrel domain HDN1F_15040 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HDN1F_15040 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HDN1F_15050 PF00664 ABC transporter transmembrane region HDN1F_15050 PF00005 ABC transporter HDN1F_15060 PF00664 ABC transporter transmembrane region HDN1F_15060 PF00005 ABC transporter HDN1F_15070 PF01026 TatD related DNase HDN1F_15090 PF01575 MaoC like domain HDN1F_15110 PF02321 Outer membrane efflux protein HDN1F_15120 PF00501 AMP-binding enzyme HDN1F_15120 PF00501 AMP-binding enzyme HDN1F_15120 PF13193 AMP-binding enzyme C-terminal domain HDN1F_15120 PF00668 Condensation domain HDN1F_15120 PF00550 Phosphopantetheine attachment site HDN1F_15120 PF00550 Phosphopantetheine attachment site HDN1F_15120 PF13193 AMP-binding enzyme C-terminal domain HDN1F_15120 PF00668 Condensation domain HDN1F_15130 PF13193 AMP-binding enzyme C-terminal domain HDN1F_15130 PF00550 Phosphopantetheine attachment site HDN1F_15130 PF00668 Condensation domain HDN1F_15130 PF00501 AMP-binding enzyme HDN1F_15140 PF00668 Condensation domain HDN1F_15140 PF13193 AMP-binding enzyme C-terminal domain HDN1F_15140 PF07993 Male sterility protein HDN1F_15140 PF00501 AMP-binding enzyme HDN1F_15140 PF00550 Phosphopantetheine attachment site HDN1F_15150 PF04851 Type III restriction enzyme, res subunit HDN1F_15150 PF08463 EcoEI R protein C-terminal HDN1F_15150 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HDN1F_15150 PF00271 Helicase conserved C-terminal domain HDN1F_15160 PF12161 HsdM N-terminal domain HDN1F_15160 PF02384 N-6 DNA Methylase HDN1F_15170 PF17761 DUF1016 N-terminal domain HDN1F_15170 PF06250 YhcG PDDEXK nuclease domain HDN1F_15190 PF13193 AMP-binding enzyme C-terminal domain HDN1F_15190 PF00501 AMP-binding enzyme HDN1F_15190 PF00550 Phosphopantetheine attachment site HDN1F_15190 PF00668 Condensation domain HDN1F_15200 PF13193 AMP-binding enzyme C-terminal domain HDN1F_15200 PF00668 Condensation domain HDN1F_15200 PF00550 Phosphopantetheine attachment site HDN1F_15200 PF00501 AMP-binding enzyme HDN1F_15200 PF00975 Thioesterase domain HDN1F_15230 PF01381 Helix-turn-helix HDN1F_15260 PF03738 Glutathionylspermidine synthase preATP-grasp HDN1F_15280 PF00202 Aminotransferase class-III HDN1F_15340 PF00975 Thioesterase domain HDN1F_15370 PF00873 AcrB/AcrD/AcrF family HDN1F_15390 PF13173 AAA domain HDN1F_15390 PF13635 Domain of unknown function (DUF4143) HDN1F_15400 PF00069 Protein kinase domain HDN1F_15400 PF03793 PASTA domain HDN1F_15480 PF04972 BON domain HDN1F_15480 PF00263 Bacterial type II and III secretion system protein HDN1F_15480 PF13629 Pilus formation protein N terminal region HDN1F_15490 PF00437 Type II/IV secretion system protein HDN1F_15570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HDN1F_15570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HDN1F_15580 PF00285 Citrate synthase, C-terminal domain HDN1F_15600 PF00676 Dehydrogenase E1 component HDN1F_15600 PF02779 Transketolase, pyrimidine binding domain HDN1F_15600 PF16870 2-oxoglutarate dehydrogenase C-terminal HDN1F_15600 PF16078 2-oxoglutarate dehydrogenase N-terminus HDN1F_15610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HDN1F_15610 PF00364 Biotin-requiring enzyme HDN1F_15610 PF02817 e3 binding domain HDN1F_15620 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_15620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HDN1F_15630 PF00549 CoA-ligase HDN1F_15630 PF08442 ATP-grasp domain HDN1F_15640 PF02629 CoA binding domain HDN1F_15640 PF00549 CoA-ligase HDN1F_15660 PF00849 RNA pseudouridylate synthase HDN1F_15670 PF00180 Isocitrate/isopropylmalate dehydrogenase HDN1F_15680 PF00313 'Cold-shock' DNA-binding domain HDN1F_15690 PF02617 ATP-dependent Clp protease adaptor protein ClpS HDN1F_15700 PF07724 AAA domain (Cdc48 subfamily) HDN1F_15700 PF10431 C-terminal, D2-small domain, of ClpB protein HDN1F_15700 PF02861 Clp amino terminal domain, pathogenicity island component HDN1F_15700 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_15700 PF17871 AAA lid domain HDN1F_15710 PF01176 Translation initiation factor 1A / IF-1 HDN1F_15720 PF04376 Arginine-tRNA-protein transferase, N terminus HDN1F_15720 PF04377 Arginine-tRNA-protein transferase, C terminus HDN1F_15730 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HDN1F_15740 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_15750 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HDN1F_15750 PF17854 FtsK alpha domain HDN1F_15750 PF09397 Ftsk gamma domain HDN1F_15750 PF01580 FtsK/SpoIIIE family HDN1F_15760 PF03548 Outer membrane lipoprotein carrier protein LolA HDN1F_15770 PF12002 MgsA AAA+ ATPase C terminal HDN1F_15770 PF16193 AAA C-terminal domain HDN1F_15770 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_15780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HDN1F_15790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HDN1F_15790 PF02403 Seryl-tRNA synthetase N-terminal domain HDN1F_15800 PF10414 Sirohaem synthase dimerisation region HDN1F_15800 PF14824 Sirohaem biosynthesis protein central HDN1F_15800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_15810 PF02743 Cache domain HDN1F_15810 PF00672 HAMP domain HDN1F_15810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_15820 PF04358 DsrC like protein HDN1F_15850 PF02635 DsrE/DsrF-like family HDN1F_15880 PF00183 Hsp90 protein HDN1F_15890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HDN1F_15890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HDN1F_15920 PF00501 AMP-binding enzyme HDN1F_15940 PF00364 Biotin-requiring enzyme HDN1F_15940 PF00561 alpha/beta hydrolase fold HDN1F_16000 PF01575 MaoC like domain HDN1F_16010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_16010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_16010 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_16050 PF05175 Methyltransferase small domain HDN1F_16060 PF01264 Chorismate synthase HDN1F_16070 PF12832 MFS_1 like family HDN1F_16090 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HDN1F_16120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_16130 PF06865 Pyrimidine/purine nucleoside phosphorylase HDN1F_16150 PF00474 Sodium:solute symporter family HDN1F_16160 PF00582 Universal stress protein family HDN1F_16170 PF01381 Helix-turn-helix HDN1F_16180 PF05973 Phage derived protein Gp49-like (DUF891) HDN1F_16190 PF00330 Aconitase family (aconitate hydratase) HDN1F_16200 PF00694 Aconitase C-terminal domain HDN1F_16210 PF00180 Isocitrate/isopropylmalate dehydrogenase HDN1F_16220 PF02774 Semialdehyde dehydrogenase, dimerisation domain HDN1F_16220 PF01118 Semialdehyde dehydrogenase, NAD binding domain HDN1F_16240 PF17862 AAA+ lid domain HDN1F_16240 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_16240 PF01434 Peptidase family M41 HDN1F_16240 PF06480 FtsH Extracellular HDN1F_16250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_16250 PF00672 HAMP domain HDN1F_16250 PF02743 Cache domain HDN1F_16260 PF01416 tRNA pseudouridine synthase HDN1F_16270 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HDN1F_16280 PF00291 Pyridoxal-phosphate dependent enzyme HDN1F_16290 PF00290 Tryptophan synthase alpha chain HDN1F_16300 PF01039 Carboxyl transferase domain HDN1F_16300 PF17848 Acetyl-coA carboxylase zinc finger domain HDN1F_16310 PF08245 Mur ligase middle domain HDN1F_16310 PF02875 Mur ligase family, glutamate ligase domain HDN1F_16330 PF02674 Colicin V production protein HDN1F_16340 PF00156 Phosphoribosyl transferase domain HDN1F_16350 PF01053 Cys/Met metabolism PLP-dependent enzyme HDN1F_16360 PF07726 ATPase family associated with various cellular activities (AAA) HDN1F_16360 PF17863 AAA lid domain HDN1F_16380 PF13559 Domain of unknown function (DUF4129) HDN1F_16380 PF01841 Transglutaminase-like superfamily HDN1F_16380 PF11992 Domain of unknown function (DUF3488) HDN1F_16400 PF01040 UbiA prenyltransferase family HDN1F_16410 PF01565 FAD binding domain HDN1F_16410 PF04030 D-arabinono-1,4-lactone oxidase HDN1F_16420 PF00106 short chain dehydrogenase HDN1F_16430 PF12826 Helix-hairpin-helix motif HDN1F_16430 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HDN1F_16430 PF01653 NAD-dependent DNA ligase adenylation domain HDN1F_16430 PF00533 BRCA1 C Terminus (BRCT) domain HDN1F_16430 PF03120 NAD-dependent DNA ligase OB-fold domain HDN1F_16450 PF01336 OB-fold nucleic acid binding domain HDN1F_16450 PF14579 Helix-hairpin-helix motif HDN1F_16450 PF02811 PHP domain HDN1F_16450 PF00929 Exonuclease HDN1F_16450 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HDN1F_16450 PF11490 DNA polymerase III polC-type N-terminus II HDN1F_16450 PF07733 Bacterial DNA polymerase III alpha NTPase domain HDN1F_16460 PF11791 Aconitate B N-terminal domain HDN1F_16460 PF06434 Aconitate hydratase 2 N-terminus HDN1F_16460 PF00330 Aconitase family (aconitate hydratase) HDN1F_16480 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HDN1F_16490 PF00149 Calcineurin-like phosphoesterase HDN1F_16500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HDN1F_16510 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HDN1F_16510 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HDN1F_16520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HDN1F_16520 PF05697 Bacterial trigger factor protein (TF) HDN1F_16520 PF05698 Bacterial trigger factor protein (TF) C-terminus HDN1F_16530 PF00574 Clp protease HDN1F_16540 PF10431 C-terminal, D2-small domain, of ClpB protein HDN1F_16540 PF07724 AAA domain (Cdc48 subfamily) HDN1F_16540 PF06689 ClpX C4-type zinc finger HDN1F_16550 PF05362 Lon protease (S16) C-terminal proteolytic domain HDN1F_16550 PF02190 ATP-dependent protease La (LON) substrate-binding domain HDN1F_16550 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_16560 PF00216 Bacterial DNA-binding protein HDN1F_16580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HDN1F_16580 PF00005 ABC transporter HDN1F_16590 PF12911 N-terminal TM domain of oligopeptide transport permease C HDN1F_16590 PF00528 Binding-protein-dependent transport system inner membrane component HDN1F_16600 PF00528 Binding-protein-dependent transport system inner membrane component HDN1F_16610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HDN1F_16620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HDN1F_16640 PF01464 Transglycosylase SLT domain HDN1F_16640 PF01476 LysM domain HDN1F_16650 PF16123 Hydroxyacylglutathione hydrolase C-terminus HDN1F_16650 PF00753 Metallo-beta-lactamase superfamily HDN1F_16660 PF01209 ubiE/COQ5 methyltransferase family HDN1F_16670 PF00075 RNase H HDN1F_16680 PF00929 Exonuclease HDN1F_16700 PF00293 NUDIX domain HDN1F_16700 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain HDN1F_16700 PF09297 NADH pyrophosphatase zinc ribbon domain HDN1F_16720 PF08496 Peptidase family S49 N-terminal HDN1F_16720 PF01343 Peptidase family S49 HDN1F_16730 PF02310 B12 binding domain HDN1F_16730 PF02607 B12 binding domain HDN1F_16730 PF02965 Vitamin B12 dependent methionine synthase, activation domain HDN1F_16730 PF00809 Pterin binding enzyme HDN1F_16730 PF02574 Homocysteine S-methyltransferase HDN1F_16740 PF01106 NifU-like domain HDN1F_16740 PF01521 Iron-sulphur cluster biosynthesis HDN1F_16750 PF00793 DAHP synthetase I family HDN1F_16790 PF00582 Universal stress protein family HDN1F_16800 PF03466 LysR substrate binding domain HDN1F_16800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_16830 PF04715 Anthranilate synthase component I, N terminal region HDN1F_16830 PF00425 chorismate binding enzyme HDN1F_16840 PF03618 Kinase/pyrophosphorylase HDN1F_16850 PF02896 PEP-utilising enzyme, TIM barrel domain HDN1F_16850 PF00391 PEP-utilising enzyme, mobile domain HDN1F_16850 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HDN1F_16860 PF01502 Phosphoribosyl-AMP cyclohydrolase HDN1F_16880 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_16880 PF08448 PAS fold HDN1F_16880 PF00563 EAL domain HDN1F_16900 PF12631 MnmE helical domain HDN1F_16900 PF10396 GTP-binding protein TrmE N-terminus HDN1F_16900 PF01926 50S ribosome-binding GTPase HDN1F_16970 PF02355 Protein export membrane protein HDN1F_16970 PF07549 SecD/SecF GG Motif HDN1F_16980 PF04172 LrgB-like family HDN1F_16990 PF03788 LrgA family HDN1F_17000 PF01370 NAD dependent epimerase/dehydratase family HDN1F_17010 PF13488 Glycine zipper HDN1F_17010 PF00691 OmpA family HDN1F_17020 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_17020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HDN1F_17030 PF00211 Adenylate and Guanylate cyclase catalytic domain HDN1F_17050 PF13808 DDE_Tnp_1-associated HDN1F_17050 PF01609 Transposase DDE domain HDN1F_17090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_17090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_17090 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_17100 PF00106 short chain dehydrogenase HDN1F_17180 PF02254 TrkA-N domain HDN1F_17180 PF00999 Sodium/hydrogen exchanger family HDN1F_17210 PF01526 Tn3 transposase DDE domain HDN1F_17210 PF13700 Domain of unknown function (DUF4158) HDN1F_17330 PF12728 Helix-turn-helix domain HDN1F_17400 PF13193 AMP-binding enzyme C-terminal domain HDN1F_17400 PF00501 AMP-binding enzyme HDN1F_17410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_17410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_17410 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_17420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_17420 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_17420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_17430 PF00732 GMC oxidoreductase HDN1F_17430 PF05199 GMC oxidoreductase HDN1F_17460 PF00106 short chain dehydrogenase HDN1F_17470 PF00743 Flavin-binding monooxygenase-like HDN1F_17490 PF13205 Bacterial Ig-like domain HDN1F_17500 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HDN1F_17520 PF07694 5TMR of 5TMR-LYT HDN1F_17520 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_17540 PF12833 Helix-turn-helix domain HDN1F_17540 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_17550 PF00111 2Fe-2S iron-sulfur cluster binding domain HDN1F_17560 PF00067 Cytochrome P450 HDN1F_17570 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_17570 PF14759 Reductase C-terminal HDN1F_17580 PF00743 Flavin-binding monooxygenase-like HDN1F_17590 PF07859 alpha/beta hydrolase fold HDN1F_17600 PF00106 short chain dehydrogenase HDN1F_17620 PF01526 Tn3 transposase DDE domain HDN1F_17620 PF13700 Domain of unknown function (DUF4158) HDN1F_17630 PF13614 AAA domain HDN1F_17640 PF17762 HTH domain found in ParB protein HDN1F_17640 PF02195 ParB-like nuclease domain HDN1F_17790 PF04002 RadC-like JAB domain HDN1F_17830 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA HDN1F_17900 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_17960 PF00239 Resolvase, N terminal domain HDN1F_17960 PF02796 Helix-turn-helix domain of resolvase HDN1F_18250 PF00589 Phage integrase family HDN1F_18250 PF02899 Phage integrase, N-terminal SAM-like domain HDN1F_18290 PF00294 pfkB family carbohydrate kinase HDN1F_18300 PF14814 Bifunctional transglycosylase second domain HDN1F_18300 PF00905 Penicillin binding protein transpeptidase domain HDN1F_18300 PF00912 Transglycosylase HDN1F_18370 PF13520 Amino acid permease HDN1F_18380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_18380 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_18380 PF00989 PAS fold HDN1F_18400 PF04143 Sulphur transport HDN1F_18410 PF01206 Sulfurtransferase TusA HDN1F_18420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_18420 PF03466 LysR substrate binding domain HDN1F_18430 PF08267 Cobalamin-independent synthase, N-terminal domain HDN1F_18430 PF01717 Cobalamin-independent synthase, Catalytic domain HDN1F_18440 PF01593 Flavin containing amine oxidoreductase HDN1F_18490 PF01926 50S ribosome-binding GTPase HDN1F_18490 PF06071 Protein of unknown function (DUF933) HDN1F_18500 PF01195 Peptidyl-tRNA hydrolase HDN1F_18510 PF01386 Ribosomal L25p family HDN1F_18510 PF14693 Ribosomal protein TL5, C-terminal domain HDN1F_18520 PF14572 Phosphoribosyl synthetase-associated domain HDN1F_18520 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HDN1F_18530 PF08544 GHMP kinases C terminal HDN1F_18530 PF00288 GHMP kinases N terminal domain HDN1F_18540 PF03550 Outer membrane lipoprotein LolB HDN1F_18590 PF01850 PIN domain HDN1F_18610 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HDN1F_18610 PF01488 Shikimate / quinate 5-dehydrogenase HDN1F_18610 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HDN1F_18620 PF00472 RF-1 domain HDN1F_18620 PF03462 PCRF domain HDN1F_18630 PF05175 Methyltransferase small domain HDN1F_18630 PF17827 PrmC N-terminal domain HDN1F_18640 PF00899 ThiF family HDN1F_18650 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HDN1F_18660 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HDN1F_18670 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HDN1F_18670 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HDN1F_18690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HDN1F_18690 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HDN1F_18700 PF00384 Molybdopterin oxidoreductase HDN1F_18700 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HDN1F_18700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HDN1F_18700 PF01568 Molydopterin dinucleotide binding domain HDN1F_18710 PF00146 NADH dehydrogenase HDN1F_18720 PF12838 4Fe-4S dicluster domain HDN1F_18730 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HDN1F_18740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HDN1F_18750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HDN1F_18750 PF00361 Proton-conducting membrane transporter HDN1F_18760 PF00361 Proton-conducting membrane transporter HDN1F_18770 PF00361 Proton-conducting membrane transporter HDN1F_18780 PF01852 START domain HDN1F_18790 PF00271 Helicase conserved C-terminal domain HDN1F_18790 PF00570 HRDC domain HDN1F_18790 PF00270 DEAD/DEAH box helicase HDN1F_18790 PF16124 RecQ zinc-binding HDN1F_18790 PF09382 RQC domain HDN1F_18800 PF08495 FIST N domain HDN1F_18800 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_18800 PF00563 EAL domain HDN1F_18800 PF10442 FIST C domain HDN1F_18820 PF04055 Radical SAM superfamily HDN1F_18830 PF01132 Elongation factor P (EF-P) OB domain HDN1F_18830 PF09285 Elongation factor P, C-terminal HDN1F_18830 PF08207 Elongation factor P (EF-P) KOW-like domain HDN1F_18840 PF00152 tRNA synthetases class II (D, K and N) HDN1F_18870 PF00089 Trypsin HDN1F_18880 PF02666 Phosphatidylserine decarboxylase HDN1F_18900 PF01618 MotA/TolQ/ExbB proton channel family HDN1F_18910 PF00691 OmpA family HDN1F_18910 PF13677 Membrane MotB of proton-channel complex MotA/MotB HDN1F_18920 PF03193 RsgA GTPase HDN1F_18930 PF00929 Exonuclease HDN1F_18940 PF03853 YjeF-related protein N-terminus HDN1F_18940 PF01256 Carbohydrate kinase HDN1F_18950 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HDN1F_18960 PF01520 N-acetylmuramoyl-L-alanine amidase HDN1F_18960 PF11741 AMIN domain HDN1F_18970 PF01119 DNA mismatch repair protein, C-terminal domain HDN1F_18970 PF08676 MutL C terminal dimerisation domain HDN1F_18980 PF01293 Phosphoenolpyruvate carboxykinase HDN1F_18990 PF01430 Hsp33 protein HDN1F_19000 PF01479 S4 domain HDN1F_19010 PF13419 Haloacid dehalogenase-like hydrolase HDN1F_19020 PF00293 NUDIX domain HDN1F_19030 PF00459 Inositol monophosphatase family HDN1F_19060 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_19060 PF03707 Bacterial signalling protein N terminal repeat HDN1F_19060 PF00563 EAL domain HDN1F_19080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_19080 PF03466 LysR substrate binding domain HDN1F_19090 PF00171 Aldehyde dehydrogenase family HDN1F_19120 PF13439 Glycosyltransferase Family 4 HDN1F_19120 PF00534 Glycosyl transferases group 1 HDN1F_19130 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_19130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_19130 PF00989 PAS fold HDN1F_19140 PF00196 Bacterial regulatory proteins, luxR family HDN1F_19140 PF00072 Response regulator receiver domain HDN1F_19150 PF01627 Hpt domain HDN1F_19150 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_19150 PF09078 CheY binding HDN1F_19150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_19150 PF01584 CheW-like domain HDN1F_19160 PF12729 Four helix bundle sensory module for signal transduction HDN1F_19160 PF00672 HAMP domain HDN1F_19160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_19170 PF01584 CheW-like domain HDN1F_19190 PF04286 Protein of unknown function (DUF445) HDN1F_19210 PF01926 50S ribosome-binding GTPase HDN1F_19220 PF00034 Cytochrome c HDN1F_19230 PF01323 DSBA-like thioredoxin domain HDN1F_19250 PF00072 Response regulator receiver domain HDN1F_19250 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_19270 PF02515 CoA-transferase family III HDN1F_19280 PF04542 Sigma-70 region 2 HDN1F_19280 PF04545 Sigma-70, region 4 HDN1F_19280 PF00140 Sigma-70 factor, region 1.2 HDN1F_19310 PF09820 Predicted AAA-ATPase HDN1F_19310 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_19330 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_19330 PF09820 Predicted AAA-ATPase HDN1F_19410 PF05717 IS66 Orf2 like protein HDN1F_19420 PF13005 zinc-finger binding domain of transposase IS66 HDN1F_19420 PF13007 Transposase C of IS166 homeodomain HDN1F_19420 PF13817 IS66 C-terminal element HDN1F_19420 PF03050 Transposase IS66 family HDN1F_19430 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HDN1F_19450 PF01565 FAD binding domain HDN1F_19450 PF04030 D-arabinono-1,4-lactone oxidase HDN1F_19480 PF00675 Insulinase (Peptidase family M16) HDN1F_19480 PF05193 Peptidase M16 inactive domain HDN1F_19490 PF00675 Insulinase (Peptidase family M16) HDN1F_19490 PF05193 Peptidase M16 inactive domain HDN1F_19510 PF00448 SRP54-type protein, GTPase domain HDN1F_19510 PF02881 SRP54-type protein, helical bundle domain HDN1F_19520 PF00005 ABC transporter HDN1F_19530 PF18075 FtsX extracellular domain HDN1F_19590 PF00145 C-5 cytosine-specific DNA methylase HDN1F_19610 PF12323 Helix-turn-helix domain HDN1F_19610 PF07282 Putative transposase DNA-binding domain HDN1F_19610 PF01385 Probable transposase HDN1F_19630 PF00069 Protein kinase domain HDN1F_19640 PF00270 DEAD/DEAH box helicase HDN1F_19640 PF00271 Helicase conserved C-terminal domain HDN1F_19640 PF17191 RecG wedge domain HDN1F_19650 PF03466 LysR substrate binding domain HDN1F_19650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_19660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HDN1F_19660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HDN1F_19670 PF05170 AsmA family HDN1F_19680 PF00583 Acetyltransferase (GNAT) family HDN1F_19680 PF00696 Amino acid kinase family HDN1F_19700 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_19700 PF14759 Reductase C-terminal HDN1F_19720 PF00111 2Fe-2S iron-sulfur cluster binding domain HDN1F_19730 PF00067 Cytochrome P450 HDN1F_19740 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_19740 PF12833 Helix-turn-helix domain HDN1F_19750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_19750 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_19750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_19760 PF13193 AMP-binding enzyme C-terminal domain HDN1F_19760 PF00501 AMP-binding enzyme HDN1F_19770 PF01039 Carboxyl transferase domain HDN1F_19780 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_19790 PF00289 Biotin carboxylase, N-terminal domain HDN1F_19790 PF00364 Biotin-requiring enzyme HDN1F_19790 PF02785 Biotin carboxylase C-terminal domain HDN1F_19790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HDN1F_19800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_19800 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_19800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_19870 PF00890 FAD binding domain HDN1F_19870 PF04205 FMN-binding domain HDN1F_19880 PF00501 AMP-binding enzyme HDN1F_19880 PF13193 AMP-binding enzyme C-terminal domain HDN1F_19930 PF01883 Iron-sulfur cluster assembly protein HDN1F_19940 PF00890 FAD binding domain HDN1F_19980 PF13193 AMP-binding enzyme C-terminal domain HDN1F_19980 PF00501 AMP-binding enzyme HDN1F_19980 PF16177 Acetyl-coenzyme A synthetase N-terminus HDN1F_20000 PF02569 Pantoate-beta-alanine ligase HDN1F_20010 PF02548 Ketopantoate hydroxymethyltransferase HDN1F_20020 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HDN1F_20030 PF12627 Probable RNA and SrmB- binding site of polymerase A HDN1F_20030 PF12626 Polymerase A arginine-rich C-terminus HDN1F_20030 PF01743 Poly A polymerase head domain HDN1F_20040 PF09820 Predicted AAA-ATPase HDN1F_20040 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_20090 PF00384 Molybdopterin oxidoreductase HDN1F_20090 PF01568 Molydopterin dinucleotide binding domain HDN1F_20100 PF13247 4Fe-4S dicluster domain HDN1F_20130 PF00150 Cellulase (glycosyl hydrolase family 5) HDN1F_20130 PF00553 Cellulose binding domain HDN1F_20150 PF13005 zinc-finger binding domain of transposase IS66 HDN1F_20150 PF13007 Transposase C of IS166 homeodomain HDN1F_20150 PF13817 IS66 C-terminal element HDN1F_20150 PF03050 Transposase IS66 family HDN1F_20160 PF05717 IS66 Orf2 like protein HDN1F_20180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_20180 PF01627 Hpt domain HDN1F_20180 PF01584 CheW-like domain HDN1F_20180 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_20180 PF07194 P2 response regulator binding domain HDN1F_20190 PF01243 Pyridoxamine 5'-phosphate oxidase HDN1F_20190 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HDN1F_20210 PF01311 Bacterial export proteins, family 1 HDN1F_20220 PF01313 Bacterial export proteins, family 3 HDN1F_20230 PF00813 FliP family HDN1F_20240 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HDN1F_20250 PF00072 Response regulator receiver domain HDN1F_20250 PF00196 Bacterial regulatory proteins, luxR family HDN1F_20260 PF13493 Domain of unknown function (DUF4118) HDN1F_20260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_20260 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_20260 PF00989 PAS fold HDN1F_20260 PF08447 PAS fold HDN1F_20260 PF13426 PAS domain HDN1F_20270 PF00771 FHIPEP family HDN1F_20320 PF01514 Secretory protein of YscJ/FliF family HDN1F_20350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HDN1F_20350 PF18269 T3SS EscN ATPase C-terminal domain HDN1F_20350 PF02874 ATP synthase alpha/beta family, beta-barrel domain HDN1F_20390 PF00180 Isocitrate/isopropylmalate dehydrogenase HDN1F_20400 PF00484 Carbonic anhydrase HDN1F_20440 PF00579 tRNA synthetases class I (W and Y) HDN1F_20450 PF00115 Cytochrome C and Quinol oxidase polypeptide I HDN1F_20460 PF01814 Hemerythrin HHE cation binding domain HDN1F_20460 PF04405 Domain of Unknown function (DUF542) HDN1F_20470 PF00158 Sigma-54 interaction domain HDN1F_20470 PF02954 Bacterial regulatory protein, Fis family HDN1F_20480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_20480 PF00672 HAMP domain HDN1F_20480 PF02203 Tar ligand binding domain homologue HDN1F_20490 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HDN1F_20490 PF06827 Zinc finger found in FPG and IleRS HDN1F_20490 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HDN1F_20510 PF02082 Transcriptional regulator HDN1F_20540 PF08468 Methyltransferase small domain N-terminal HDN1F_20540 PF05175 Methyltransferase small domain HDN1F_20550 PF01479 S4 domain HDN1F_20550 PF00849 RNA pseudouridylate synthase HDN1F_20580 PF01627 Hpt domain HDN1F_20580 PF01584 CheW-like domain HDN1F_20580 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_20580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_20580 PF07194 P2 response regulator binding domain HDN1F_20590 PF00072 Response regulator receiver domain HDN1F_20610 PF08447 PAS fold HDN1F_20610 PF13426 PAS domain HDN1F_20610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_20620 PF00390 Malic enzyme, N-terminal domain HDN1F_20620 PF01515 Phosphate acetyl/butaryl transferase HDN1F_20620 PF03949 Malic enzyme, NAD binding domain HDN1F_20630 PF03741 Integral membrane protein TerC family HDN1F_20640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_20640 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_20640 PF09308 LuxQ, periplasmic HDN1F_20640 PF00072 Response regulator receiver domain HDN1F_20660 PF00989 PAS fold HDN1F_20660 PF01627 Hpt domain HDN1F_20660 PF00072 Response regulator receiver domain HDN1F_20660 PF00497 Bacterial extracellular solute-binding proteins, family 3 HDN1F_20660 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_20660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_20670 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_20670 PF00497 Bacterial extracellular solute-binding proteins, family 3 HDN1F_20670 PF00072 Response regulator receiver domain HDN1F_20670 PF01627 Hpt domain HDN1F_20670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_20680 PF00672 HAMP domain HDN1F_20680 PF00072 Response regulator receiver domain HDN1F_20680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_20680 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_20680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_20680 PF01627 Hpt domain HDN1F_20690 PF00465 Iron-containing alcohol dehydrogenase HDN1F_20710 PF01329 Pterin 4 alpha carbinolamine dehydratase HDN1F_20720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HDN1F_20730 PF00563 EAL domain HDN1F_20730 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_20730 PF03707 Bacterial signalling protein N terminal repeat HDN1F_20740 PF02580 D-Tyr-tRNA(Tyr) deacylase HDN1F_20750 PF04293 SpoVR like protein HDN1F_20760 PF04285 Protein of unknown function (DUF444) HDN1F_20770 PF06798 PrkA serine protein kinase C-terminal domain HDN1F_20770 PF08298 PrkA AAA domain HDN1F_20780 PF00149 Calcineurin-like phosphoesterase HDN1F_20790 PF04379 ApaG domain HDN1F_20800 PF00398 Ribosomal RNA adenine dimethylase HDN1F_20810 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HDN1F_20820 PF09312 SurA N-terminal domain HDN1F_20820 PF00639 PPIC-type PPIASE domain HDN1F_20830 PF04453 LPS transport system D HDN1F_20830 PF03968 OstA-like protein HDN1F_20840 PF01636 Phosphotransferase enzyme family HDN1F_20850 PF00483 Nucleotidyl transferase HDN1F_20860 PF05099 Tellurite resistance protein TerB HDN1F_20860 PF00226 DnaJ domain HDN1F_20880 PF00672 HAMP domain HDN1F_20880 PF12729 Four helix bundle sensory module for signal transduction HDN1F_20880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_20940 PF00563 EAL domain HDN1F_20940 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_20940 PF03707 Bacterial signalling protein N terminal repeat HDN1F_20950 PF00834 Ribulose-phosphate 3 epimerase family HDN1F_20960 PF13419 Haloacid dehalogenase-like hydrolase HDN1F_20970 PF01323 DSBA-like thioredoxin domain HDN1F_21000 PF17761 DUF1016 N-terminal domain HDN1F_21000 PF06250 YhcG PDDEXK nuclease domain HDN1F_21020 PF10544 T5orf172 domain HDN1F_21040 PF16653 Saccharopine dehydrogenase C-terminal domain HDN1F_21040 PF03435 Saccharopine dehydrogenase NADP binding domain HDN1F_21050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HDN1F_21080 PF00425 chorismate binding enzyme HDN1F_21080 PF04715 Anthranilate synthase component I, N terminal region HDN1F_21090 PF00117 Glutamine amidotransferase class-I HDN1F_21100 PF02885 Glycosyl transferase family, helical bundle domain HDN1F_21100 PF00591 Glycosyl transferase family, a/b domain HDN1F_21110 PF00218 Indole-3-glycerol phosphate synthase HDN1F_21120 PF00043 Glutathione S-transferase, C-terminal domain HDN1F_21120 PF02798 Glutathione S-transferase, N-terminal domain HDN1F_21140 PF17209 Hfq protein HDN1F_21150 PF13167 GTP-binding GTPase N-terminal HDN1F_21150 PF01926 50S ribosome-binding GTPase HDN1F_21150 PF16360 GTP-binding GTPase Middle Region HDN1F_21160 PF12221 Bacterial membrane protein N terminal HDN1F_21160 PF01145 SPFH domain / Band 7 family HDN1F_21170 PF01145 SPFH domain / Band 7 family HDN1F_21190 PF13393 Histidyl-tRNA synthetase HDN1F_21200 PF00709 Adenylosuccinate synthetase HDN1F_21230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HDN1F_21230 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_21250 PF02657 Fe-S metabolism associated domain HDN1F_21260 PF01883 Iron-sulfur cluster assembly protein HDN1F_21270 PF01521 Iron-sulphur cluster biosynthesis HDN1F_21280 PF00266 Aminotransferase class-V HDN1F_21290 PF01458 Uncharacterized protein family (UPF0051) HDN1F_21300 PF00005 ABC transporter HDN1F_21310 PF01458 Uncharacterized protein family (UPF0051) HDN1F_21320 PF02082 Transcriptional regulator HDN1F_21360 PF01554 MatE HDN1F_21380 PF00873 AcrB/AcrD/AcrF family HDN1F_21390 PF13533 Biotin-lipoyl like HDN1F_21420 PF00970 Oxidoreductase FAD-binding domain HDN1F_21420 PF00175 Oxidoreductase NAD-binding domain HDN1F_21430 PF08361 MAATS-type transcriptional repressor, C-terminal region HDN1F_21430 PF00440 Bacterial regulatory proteins, tetR family HDN1F_21480 PF00487 Fatty acid desaturase HDN1F_21490 PF00175 Oxidoreductase NAD-binding domain HDN1F_21490 PF00970 Oxidoreductase FAD-binding domain HDN1F_21490 PF00111 2Fe-2S iron-sulfur cluster binding domain HDN1F_21500 PF00440 Bacterial regulatory proteins, tetR family HDN1F_21510 PF00529 HlyD membrane-fusion protein of T1SS HDN1F_21510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_21520 PF00873 AcrB/AcrD/AcrF family HDN1F_21540 PF10458 Valyl tRNA synthetase tRNA binding arm HDN1F_21540 PF08264 Anticodon-binding domain of tRNA HDN1F_21540 PF00133 tRNA synthetases class I (I, L, M and V) HDN1F_21580 PF00883 Cytosol aminopeptidase family, catalytic domain HDN1F_21580 PF02789 Cytosol aminopeptidase family, N-terminal domain HDN1F_21590 PF03739 Lipopolysaccharide export system permease LptF/LptG HDN1F_21600 PF03739 Lipopolysaccharide export system permease LptF/LptG HDN1F_21620 PF02547 Queuosine biosynthesis protein HDN1F_21630 PF01702 Queuine tRNA-ribosyltransferase HDN1F_21640 PF02699 Preprotein translocase subunit HDN1F_21680 PF00459 Inositol monophosphatase family HDN1F_21690 PF00588 SpoU rRNA Methylase family HDN1F_21700 PF00132 Bacterial transferase hexapeptide (six repeats) HDN1F_21710 PF02082 Transcriptional regulator HDN1F_21720 PF00266 Aminotransferase class-V HDN1F_21740 PF00334 Nucleoside diphosphate kinase HDN1F_21750 PF04055 Radical SAM superfamily HDN1F_21780 PF04551 GcpE protein HDN1F_21790 PF13393 Histidyl-tRNA synthetase HDN1F_21790 PF03129 Anticodon binding domain HDN1F_21800 PF09976 Tetratricopeptide repeat-like domain HDN1F_21810 PF13360 PQQ-like domain HDN1F_21820 PF01926 50S ribosome-binding GTPase HDN1F_21820 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HDN1F_21840 PF17874 MalT-like TPR region HDN1F_21840 PF00196 Bacterial regulatory proteins, luxR family HDN1F_21860 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_21860 PF09820 Predicted AAA-ATPase HDN1F_21870 PF01029 NusB family HDN1F_21870 PF01189 16S rRNA methyltransferase RsmB/F HDN1F_21970 PF00082 Subtilase family HDN1F_22020 PF00271 Helicase conserved C-terminal domain HDN1F_22020 PF00176 SNF2 family N-terminal domain HDN1F_22030 PF00072 Response regulator receiver domain HDN1F_22030 PF00158 Sigma-54 interaction domain HDN1F_22070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_22070 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_22070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_22080 PF03466 LysR substrate binding domain HDN1F_22080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_22090 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HDN1F_22090 PF00437 Type II/IV secretion system protein HDN1F_22100 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_22100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_22100 PF18158 Adaptive response protein AidB N-terminal domain HDN1F_22110 PF00478 IMP dehydrogenase / GMP reductase domain HDN1F_22110 PF00571 CBS domain HDN1F_22120 PF00958 GMP synthase C terminal domain HDN1F_22120 PF00117 Glutamine amidotransferase class-I HDN1F_22120 PF02540 NAD synthase HDN1F_22150 PF17191 RecG wedge domain HDN1F_22150 PF00270 DEAD/DEAH box helicase HDN1F_22150 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HDN1F_22170 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HDN1F_22210 PF04542 Sigma-70 region 2 HDN1F_22210 PF08281 Sigma-70, region 4 HDN1F_22230 PF03880 DbpA RNA binding domain HDN1F_22230 PF00270 DEAD/DEAH box helicase HDN1F_22230 PF00271 Helicase conserved C-terminal domain HDN1F_22250 PF01544 CorA-like Mg2+ transporter protein HDN1F_22260 PF14437 MafB19-like deaminase HDN1F_22280 PF01464 Transglycosylase SLT domain HDN1F_22280 PF00497 Bacterial extracellular solute-binding proteins, family 3 HDN1F_22290 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HDN1F_22290 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HDN1F_22290 PF02769 AIR synthase related protein, C-terminal domain HDN1F_22310 PF01784 NIF3 (NGG1p interacting factor 3) HDN1F_22320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_22320 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_22320 PF09308 LuxQ, periplasmic HDN1F_22320 PF00072 Response regulator receiver domain HDN1F_22350 PF00293 NUDIX domain HDN1F_22360 PF00132 Bacterial transferase hexapeptide (six repeats) HDN1F_22370 PF00571 CBS domain HDN1F_22370 PF01595 Cyclin M transmembrane N-terminal domain HDN1F_22370 PF03471 Transporter associated domain HDN1F_22380 PF01578 Cytochrome C assembly protein HDN1F_22390 PF02881 SRP54-type protein, helical bundle domain HDN1F_22390 PF00448 SRP54-type protein, GTPase domain HDN1F_22390 PF02978 Signal peptide binding domain HDN1F_22400 PF00886 Ribosomal protein S16 HDN1F_22410 PF01782 RimM N-terminal domain HDN1F_22410 PF05239 PRC-barrel domain HDN1F_22420 PF01746 tRNA (Guanine-1)-methyltransferase HDN1F_22430 PF01245 Ribosomal protein L19 HDN1F_22440 PF00589 Phage integrase family HDN1F_22440 PF02899 Phage integrase, N-terminal SAM-like domain HDN1F_22450 PF13098 Thioredoxin-like domain HDN1F_22450 PF10411 Disulfide bond isomerase protein N-terminus HDN1F_22460 PF01842 ACT domain HDN1F_22460 PF00742 Homoserine dehydrogenase HDN1F_22460 PF03447 Homoserine dehydrogenase, NAD binding domain HDN1F_22470 PF00291 Pyridoxal-phosphate dependent enzyme HDN1F_22480 PF17768 RecJ OB domain HDN1F_22480 PF02272 DHHA1 domain HDN1F_22480 PF01368 DHH family HDN1F_22490 PF04381 Putative exonuclease, RdgC HDN1F_22500 PF03462 PCRF domain HDN1F_22500 PF00472 RF-1 domain HDN1F_22510 PF01336 OB-fold nucleic acid binding domain HDN1F_22510 PF00152 tRNA synthetases class II (D, K and N) HDN1F_22530 PF03167 Uracil DNA glycosylase superfamily HDN1F_22540 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HDN1F_22560 PF00171 Aldehyde dehydrogenase family HDN1F_22570 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_22580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HDN1F_22580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HDN1F_22590 PF00881 Nitroreductase family HDN1F_22600 PF01757 Acyltransferase family HDN1F_22610 PF12833 Helix-turn-helix domain HDN1F_22610 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_22640 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_22640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_22640 PF00989 PAS fold HDN1F_22640 PF11808 Phosphate regulon sensor protein PhoR HDN1F_22650 PF00072 Response regulator receiver domain HDN1F_22650 PF00486 Transcriptional regulatory protein, C terminal HDN1F_22660 PF01895 PhoU domain HDN1F_22670 PF00005 ABC transporter HDN1F_22680 PF00528 Binding-protein-dependent transport system inner membrane component HDN1F_22690 PF00528 Binding-protein-dependent transport system inner membrane component HDN1F_22700 PF12849 PBP superfamily domain HDN1F_22720 PF07690 Major Facilitator Superfamily HDN1F_22730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_22730 PF00529 HlyD membrane-fusion protein of T1SS HDN1F_22740 PF01047 MarR family HDN1F_22750 PF01381 Helix-turn-helix HDN1F_22760 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HDN1F_22770 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HDN1F_22790 PF13847 Methyltransferase domain HDN1F_22820 PF00106 short chain dehydrogenase HDN1F_22830 PF08240 Alcohol dehydrogenase GroES-like domain HDN1F_22830 PF00107 Zinc-binding dehydrogenase HDN1F_22900 PF00271 Helicase conserved C-terminal domain HDN1F_22900 PF00176 SNF2 family N-terminal domain HDN1F_22920 PF01555 DNA methylase HDN1F_22920 PF18273 Type III R-M EcoP15I C-terminal domain HDN1F_22930 PF04851 Type III restriction enzyme, res subunit HDN1F_22930 PF08774 VRR-NUC domain HDN1F_22980 PF00239 Resolvase, N terminal domain HDN1F_22980 PF02796 Helix-turn-helix domain of resolvase HDN1F_23030 PF01668 SmpB protein HDN1F_23040 PF03658 RnfH family Ubiquitin HDN1F_23050 PF04355 SmpA / OmlA family HDN1F_23060 PF01475 Ferric uptake regulator family HDN1F_23070 PF02463 RecF/RecN/SMC N terminal domain HDN1F_23100 PF01476 LysM domain HDN1F_23120 PF04434 SWIM zinc finger HDN1F_23130 PF00176 SNF2 family N-terminal domain HDN1F_23130 PF12419 SNF2 Helicase protein HDN1F_23130 PF00271 Helicase conserved C-terminal domain HDN1F_23180 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HDN1F_23180 PF01628 HrcA protein C terminal domain HDN1F_23190 PF01025 GrpE HDN1F_23200 PF00012 Hsp70 protein HDN1F_23210 PF00226 DnaJ domain HDN1F_23210 PF01556 DnaJ C terminal domain HDN1F_23210 PF00684 DnaJ central domain HDN1F_23220 PF01113 Dihydrodipicolinate reductase, N-terminus HDN1F_23220 PF05173 Dihydrodipicolinate reductase, C-terminus HDN1F_23240 PF00117 Glutamine amidotransferase class-I HDN1F_23240 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HDN1F_23250 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HDN1F_23250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HDN1F_23250 PF02142 MGS-like domain HDN1F_23260 PF03449 Transcription elongation factor, N-terminal HDN1F_23260 PF01272 Transcription elongation factor, GreA/GreB, C-term HDN1F_23270 PF01197 Ribosomal protein L31 HDN1F_23290 PF00905 Penicillin binding protein transpeptidase domain HDN1F_23290 PF00912 Transglycosylase HDN1F_23290 PF17092 Penicillin-binding protein OB-like domain HDN1F_23340 PF11741 AMIN domain HDN1F_23340 PF00263 Bacterial type II and III secretion system protein HDN1F_23340 PF03958 Bacterial type II/III secretion system short domain HDN1F_23340 PF07660 Secretin and TonB N terminus short domain HDN1F_23350 PF01202 Shikimate kinase HDN1F_23360 PF01761 3-dehydroquinate synthase HDN1F_23380 PF01208 Uroporphyrinogen decarboxylase (URO-D) HDN1F_23400 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HDN1F_23410 PF09335 SNARE associated Golgi protein HDN1F_23480 PF00902 Sec-independent protein translocase protein (TatC) HDN1F_23490 PF02416 mttA/Hcf106 family HDN1F_23500 PF02416 mttA/Hcf106 family HDN1F_23510 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HDN1F_23520 PF01209 ubiE/COQ5 methyltransferase family HDN1F_23540 PF10431 C-terminal, D2-small domain, of ClpB protein HDN1F_23540 PF07724 AAA domain (Cdc48 subfamily) HDN1F_23540 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_23550 PF00227 Proteasome subunit HDN1F_23580 PF00750 tRNA synthetases class I (R) HDN1F_23580 PF05746 DALR anticodon binding domain HDN1F_23580 PF03485 Arginyl tRNA synthetase N terminal domain HDN1F_23630 PF00271 Helicase conserved C-terminal domain HDN1F_23630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HDN1F_23630 PF18074 Primosomal protein N C-terminal domain HDN1F_23630 PF17764 3′ DNA-binding domain (3′BD) HDN1F_23630 PF00270 DEAD/DEAH box helicase HDN1F_23650 PF06594 Haemolysin-type calcium binding protein related domain HDN1F_23650 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HDN1F_23680 PF00664 ABC transporter transmembrane region HDN1F_23680 PF00005 ABC transporter HDN1F_23680 PF03412 Peptidase C39 family HDN1F_23690 PF01526 Tn3 transposase DDE domain HDN1F_23690 PF13700 Domain of unknown function (DUF4158) HDN1F_23720 PF08461 Ribonuclease R winged-helix domain HDN1F_23720 PF17876 Cold shock domain HDN1F_23720 PF08206 Ribonuclease B OB domain HDN1F_23720 PF00575 S1 RNA binding domain HDN1F_23720 PF00773 RNB domain HDN1F_23730 PF00588 SpoU rRNA Methylase family HDN1F_23730 PF08032 RNA 2'-O ribose methyltransferase substrate binding HDN1F_23740 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) HDN1F_23750 PF06672 Protein of unknown function (DUF1175) HDN1F_23760 PF00207 Alpha-2-macroglobulin family HDN1F_23760 PF01835 MG2 domain HDN1F_23760 PF07703 Alpha-2-macroglobulin bait region domain HDN1F_23770 PF10062 Predicted secreted protein (DUF2300) HDN1F_23770 PF08486 Stage II sporulation protein HDN1F_23780 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) HDN1F_23790 PF01312 FlhB HrpN YscU SpaS Family HDN1F_23820 PF01250 Ribosomal protein S6 HDN1F_23830 PF00436 Single-strand binding protein family HDN1F_23840 PF01084 Ribosomal protein S18 HDN1F_23860 PF01281 Ribosomal protein L9, N-terminal domain HDN1F_23860 PF03948 Ribosomal protein L9, C-terminal domain HDN1F_23910 PF00873 AcrB/AcrD/AcrF family HDN1F_23920 PF03600 Citrate transporter HDN1F_23930 PF11973 NQRA C-terminal domain HDN1F_23930 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HDN1F_23940 PF03116 NQR2, RnfD, RnfE family HDN1F_23950 PF04205 FMN-binding domain HDN1F_23960 PF02508 Rnf-Nqr subunit, membrane protein HDN1F_23970 PF02508 Rnf-Nqr subunit, membrane protein HDN1F_23980 PF00175 Oxidoreductase NAD-binding domain HDN1F_23980 PF00970 Oxidoreductase FAD-binding domain HDN1F_23980 PF00111 2Fe-2S iron-sulfur cluster binding domain HDN1F_23990 PF02424 ApbE family HDN1F_24010 PF00772 DnaB-like helicase N terminal domain HDN1F_24010 PF03796 DnaB-like helicase C terminal domain HDN1F_24020 PF00842 Alanine racemase, C-terminal domain HDN1F_24020 PF01168 Alanine racemase, N-terminal domain HDN1F_24040 PF18073 Rubredoxin metal binding domain HDN1F_24050 PF12704 MacB-like periplasmic core domain HDN1F_24050 PF02687 FtsX-like permease family HDN1F_24070 PF07238 PilZ domain HDN1F_24090 PF04403 Paraquat-inducible protein A HDN1F_24100 PF04403 Paraquat-inducible protein A HDN1F_24110 PF02470 MlaD protein HDN1F_24130 PF03023 Lipid II flippase MurJ HDN1F_24140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HDN1F_24180 PF00582 Universal stress protein family HDN1F_24190 PF02254 TrkA-N domain HDN1F_24190 PF02080 TrkA-C domain HDN1F_24190 PF00999 Sodium/hydrogen exchanger family HDN1F_24210 PF01699 Sodium/calcium exchanger protein HDN1F_24240 PF13426 PAS domain HDN1F_24240 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_24240 PF00563 EAL domain HDN1F_24250 PF04542 Sigma-70 region 2 HDN1F_24250 PF08281 Sigma-70, region 4 HDN1F_24260 PF01227 GTP cyclohydrolase I HDN1F_24270 PF03169 OPT oligopeptide transporter protein HDN1F_24280 PF00082 Subtilase family HDN1F_24280 PF01483 Proprotein convertase P-domain HDN1F_24330 PF13416 Bacterial extracellular solute-binding protein HDN1F_24340 PF00528 Binding-protein-dependent transport system inner membrane component HDN1F_24350 PF08402 TOBE domain HDN1F_24350 PF00005 ABC transporter HDN1F_24390 PF12848 ABC transporter HDN1F_24390 PF00005 ABC transporter HDN1F_24400 PF13173 AAA domain HDN1F_24400 PF13635 Domain of unknown function (DUF4143) HDN1F_24410 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HDN1F_24420 PF01494 FAD binding domain HDN1F_24450 PF04241 Protein of unknown function (DUF423) HDN1F_24460 PF01541 GIY-YIG catalytic domain HDN1F_24470 PF05199 GMC oxidoreductase HDN1F_24470 PF00732 GMC oxidoreductase HDN1F_24510 PF13406 Transglycosylase SLT domain HDN1F_24530 PF01709 Transcriptional regulator HDN1F_24550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_24550 PF00672 HAMP domain HDN1F_24550 PF17200 Single Cache domain 2 HDN1F_24570 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HDN1F_24570 PF14850 DNA-binding domain of Proline dehydrogenase HDN1F_24570 PF01619 Proline dehydrogenase HDN1F_24570 PF00171 Aldehyde dehydrogenase family HDN1F_24580 PF01053 Cys/Met metabolism PLP-dependent enzyme HDN1F_24590 PF00437 Type II/IV secretion system protein HDN1F_24590 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HDN1F_24600 PF01757 Acyltransferase family HDN1F_24620 PF03710 Glutamate-ammonia ligase adenylyltransferase HDN1F_24620 PF08335 GlnD PII-uridylyltransferase HDN1F_24630 PF00072 Response regulator receiver domain HDN1F_24630 PF01627 Hpt domain HDN1F_24630 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_24630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_24650 PF01063 Amino-transferase class IV HDN1F_24670 PF00005 ABC transporter HDN1F_24670 PF00664 ABC transporter transmembrane region HDN1F_24730 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_24730 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_24760 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_24760 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_24810 PF00221 Aromatic amino acid lyase HDN1F_24830 PF13193 AMP-binding enzyme C-terminal domain HDN1F_24830 PF00501 AMP-binding enzyme HDN1F_24850 PF00550 Phosphopantetheine attachment site HDN1F_24860 PF00550 Phosphopantetheine attachment site HDN1F_24870 PF01553 Acyltransferase HDN1F_24890 PF00403 Heavy-metal-associated domain HDN1F_24940 PF03473 MOSC domain HDN1F_24940 PF03475 3-alpha domain HDN1F_24950 PF00034 Cytochrome c HDN1F_24960 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_24970 PF07687 Peptidase dimerisation domain HDN1F_24970 PF01546 Peptidase family M20/M25/M40 HDN1F_24980 PF00561 alpha/beta hydrolase fold HDN1F_25020 PF07690 Major Facilitator Superfamily HDN1F_25040 PF08534 Redoxin HDN1F_25050 PF01050 Mannose-6-phosphate isomerase HDN1F_25050 PF00483 Nucleotidyl transferase HDN1F_25060 PF13086 AAA domain HDN1F_25060 PF13086 AAA domain HDN1F_25060 PF13195 Protein of unknown function (DUF4011) HDN1F_25060 PF13087 AAA domain HDN1F_25060 PF13195 Protein of unknown function (DUF4011) HDN1F_25060 PF13087 AAA domain HDN1F_25070 PF00293 NUDIX domain HDN1F_25110 PF00535 Glycosyl transferase family 2 HDN1F_25130 PF00534 Glycosyl transferases group 1 HDN1F_25130 PF13439 Glycosyltransferase Family 4 HDN1F_25170 PF02397 Bacterial sugar transferase HDN1F_25210 PF07715 TonB-dependent Receptor Plug Domain HDN1F_25210 PF00593 TonB dependent receptor HDN1F_25240 PF00202 Aminotransferase class-III HDN1F_25250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HDN1F_25250 PF00384 Molybdopterin oxidoreductase HDN1F_25250 PF01568 Molydopterin dinucleotide binding domain HDN1F_25250 PF04324 BFD-like [2Fe-2S] binding domain HDN1F_25260 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HDN1F_25260 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HDN1F_25260 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_25260 PF18267 Rubredoxin NAD+ reductase C-terminal domain HDN1F_25260 PF04324 BFD-like [2Fe-2S] binding domain HDN1F_25270 PF07690 Major Facilitator Superfamily HDN1F_25290 PF08241 Methyltransferase domain HDN1F_25300 PF00672 HAMP domain HDN1F_25300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_25330 PF00464 Serine hydroxymethyltransferase HDN1F_25340 PF03960 ArsC family HDN1F_25350 PF00999 Sodium/hydrogen exchanger family HDN1F_25380 PF04143 Sulphur transport HDN1F_25390 PF03477 ATP cone domain HDN1F_25400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HDN1F_25400 PF01872 RibD C-terminal domain HDN1F_25410 PF00677 Lumazine binding domain HDN1F_25420 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HDN1F_25420 PF00925 GTP cyclohydrolase II HDN1F_25430 PF00885 6,7-dimethyl-8-ribityllumazine synthase HDN1F_25450 PF01029 NusB family HDN1F_25460 PF00586 AIR synthase related protein, N-terminal domain HDN1F_25460 PF02769 AIR synthase related protein, C-terminal domain HDN1F_25510 PF00768 D-alanyl-D-alanine carboxypeptidase HDN1F_25520 PF00226 DnaJ domain HDN1F_25520 PF01556 DnaJ C terminal domain HDN1F_25530 PF02233 NAD(P) transhydrogenase beta subunit HDN1F_25540 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HDN1F_25550 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HDN1F_25550 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HDN1F_25580 PF08019 Phosphoethanolamine transferase EptA/EptB HDN1F_25580 PF00884 Sulfatase HDN1F_25590 PF00884 Sulfatase HDN1F_25590 PF12411 Choline sulfatase enzyme C terminal HDN1F_25600 PF18719 ArlS sensor domain HDN1F_25600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_25600 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_25610 PF00486 Transcriptional regulatory protein, C terminal HDN1F_25610 PF00072 Response regulator receiver domain HDN1F_25620 PF00916 Sulfate permease family HDN1F_25620 PF01740 STAS domain HDN1F_25660 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HDN1F_25670 PF00535 Glycosyl transferase family 2 HDN1F_25690 PF01434 Peptidase family M41 HDN1F_25690 PF06480 FtsH Extracellular HDN1F_25690 PF17862 AAA+ lid domain HDN1F_25690 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_25740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_25740 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_25740 PF09308 LuxQ, periplasmic HDN1F_25740 PF00072 Response regulator receiver domain HDN1F_25750 PF00672 HAMP domain HDN1F_25750 PF00211 Adenylate and Guanylate cyclase catalytic domain HDN1F_25770 PF01797 Transposase IS200 like HDN1F_25780 PF07282 Putative transposase DNA-binding domain HDN1F_25780 PF01385 Probable transposase HDN1F_25780 PF12323 Helix-turn-helix domain HDN1F_25790 PF00171 Aldehyde dehydrogenase family HDN1F_25800 PF03061 Thioesterase superfamily HDN1F_25810 PF00465 Iron-containing alcohol dehydrogenase HDN1F_25830 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HDN1F_25830 PF02780 Transketolase, C-terminal domain HDN1F_25830 PF02779 Transketolase, pyrimidine binding domain HDN1F_25840 PF00348 Polyprenyl synthetase HDN1F_25850 PF00440 Bacterial regulatory proteins, tetR family HDN1F_25850 PF16295 Tetracyclin repressor-like, C-terminal domain HDN1F_25860 PF13677 Membrane MotB of proton-channel complex MotA/MotB HDN1F_25860 PF00691 OmpA family HDN1F_25870 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_25870 PF12833 Helix-turn-helix domain HDN1F_25890 PF08448 PAS fold HDN1F_25890 PF00563 EAL domain HDN1F_25890 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_25900 PF01381 Helix-turn-helix HDN1F_25910 PF05973 Phage derived protein Gp49-like (DUF891) HDN1F_25940 PF02554 Carbon starvation protein CstA HDN1F_25940 PF13722 5TM C-terminal transporter carbon starvation CstA HDN1F_25950 PF04328 Selenoprotein, putative HDN1F_25960 PF01541 GIY-YIG catalytic domain HDN1F_25980 PF07715 TonB-dependent Receptor Plug Domain HDN1F_25980 PF00593 TonB dependent receptor HDN1F_25990 PF02514 CobN/Magnesium Chelatase HDN1F_26030 PF00871 Acetokinase family HDN1F_26040 PF07085 DRTGG domain HDN1F_26040 PF01515 Phosphate acetyl/butaryl transferase HDN1F_26050 PF03776 Septum formation topological specificity factor MinE HDN1F_26060 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HDN1F_26070 PF03775 Septum formation inhibitor MinC, C-terminal domain HDN1F_26070 PF05209 Septum formation inhibitor MinC, N-terminal domain HDN1F_26080 PF16363 GDP-mannose 4,6 dehydratase HDN1F_26100 PF00072 Response regulator receiver domain HDN1F_26100 PF00672 HAMP domain HDN1F_26100 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_26100 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_26100 PF01627 Hpt domain HDN1F_26100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_26110 PF00571 CBS domain HDN1F_26120 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HDN1F_26130 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HDN1F_26140 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HDN1F_26140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HDN1F_26160 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HDN1F_26160 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HDN1F_26160 PF10531 SLBB domain HDN1F_26170 PF00384 Molybdopterin oxidoreductase HDN1F_26170 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HDN1F_26170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HDN1F_26180 PF00146 NADH dehydrogenase HDN1F_26190 PF12838 4Fe-4S dicluster domain HDN1F_26200 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HDN1F_26210 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HDN1F_26220 PF00361 Proton-conducting membrane transporter HDN1F_26220 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HDN1F_26230 PF00361 Proton-conducting membrane transporter HDN1F_26240 PF00361 Proton-conducting membrane transporter HDN1F_26260 PF12557 Cob(I)alamin adenosyltransferase N terminal HDN1F_26260 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HDN1F_26270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HDN1F_26270 PF07685 CobB/CobQ-like glutamine amidotransferase domain HDN1F_26280 PF02570 Precorrin-8X methylmutase HDN1F_26290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_26300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_26310 PF02571 Precorrin-6x reductase CbiJ/CobK HDN1F_26320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_26340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_26350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_26360 PF02514 CobN/Magnesium Chelatase HDN1F_26370 PF07728 AAA domain (dynein-related subfamily) HDN1F_26370 PF17863 AAA lid domain HDN1F_26370 PF13519 von Willebrand factor type A domain HDN1F_26390 PF00005 ABC transporter HDN1F_26400 PF01032 FecCD transport family HDN1F_26420 PF07715 TonB-dependent Receptor Plug Domain HDN1F_26420 PF00593 TonB dependent receptor HDN1F_26430 PF03060 Nitronate monooxygenase HDN1F_26440 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HDN1F_26440 PF02844 Phosphoribosylglycinamide synthetase, N domain HDN1F_26440 PF02843 Phosphoribosylglycinamide synthetase, C domain HDN1F_26450 PF02142 MGS-like domain HDN1F_26450 PF01808 AICARFT/IMPCHase bienzyme HDN1F_26460 PF09820 Predicted AAA-ATPase HDN1F_26460 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_26470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_26470 PF08447 PAS fold HDN1F_26480 PF09820 Predicted AAA-ATPase HDN1F_26480 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_26500 PF00732 GMC oxidoreductase HDN1F_26500 PF05199 GMC oxidoreductase HDN1F_26550 PF09820 Predicted AAA-ATPase HDN1F_26550 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_26580 PF01370 NAD dependent epimerase/dehydratase family HDN1F_26590 PF08421 Putative zinc binding domain HDN1F_26590 PF08484 C-methyltransferase C-terminal domain HDN1F_26600 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HDN1F_26610 PF16363 GDP-mannose 4,6 dehydratase HDN1F_26620 PF00483 Nucleotidyl transferase HDN1F_26630 PF00223 Photosystem I psaA/psaB protein HDN1F_26630 PF00691 OmpA family HDN1F_26660 PF00672 HAMP domain HDN1F_26660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_26660 PF17200 Single Cache domain 2 HDN1F_26680 PF02954 Bacterial regulatory protein, Fis family HDN1F_26690 PF01207 Dihydrouridine synthase (Dus) HDN1F_26730 PF02785 Biotin carboxylase C-terminal domain HDN1F_26730 PF00289 Biotin carboxylase, N-terminal domain HDN1F_26730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HDN1F_26740 PF00364 Biotin-requiring enzyme HDN1F_26750 PF01220 Dehydroquinase class II HDN1F_26760 PF02683 Cytochrome C biogenesis protein transmembrane region HDN1F_26760 PF11412 Disulphide bond corrector protein DsbC HDN1F_26780 PF00563 EAL domain HDN1F_26780 PF13185 GAF domain HDN1F_26780 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_26800 PF00719 Inorganic pyrophosphatase HDN1F_26820 PF02875 Mur ligase family, glutamate ligase domain HDN1F_26820 PF01225 Mur ligase family, catalytic domain HDN1F_26820 PF08245 Mur ligase middle domain HDN1F_26850 PF00171 Aldehyde dehydrogenase family HDN1F_26870 PF03783 Curli production assembly/transport component CsgG HDN1F_26900 PF05643 Putative bacterial lipoprotein (DUF799) HDN1F_26930 PF03334 Na+/H+ antiporter subunit HDN1F_26940 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HDN1F_26950 PF01899 Na+/H+ ion antiporter subunit HDN1F_26960 PF00361 Proton-conducting membrane transporter HDN1F_26970 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HDN1F_26980 PF00361 Proton-conducting membrane transporter HDN1F_26980 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HDN1F_26980 PF13244 Domain of unknown function (DUF4040) HDN1F_26980 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HDN1F_26990 PF02690 Na+/Pi-cotransporter HDN1F_27000 PF00209 Sodium:neurotransmitter symporter family HDN1F_27010 PF03631 Virulence factor BrkB HDN1F_27020 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_27020 PF09820 Predicted AAA-ATPase HDN1F_27030 PF09820 Predicted AAA-ATPase HDN1F_27030 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_27060 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_27060 PF09820 Predicted AAA-ATPase HDN1F_27080 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation HDN1F_27080 PF01118 Semialdehyde dehydrogenase, NAD binding domain HDN1F_27090 PF01557 Fumarylacetoacetate (FAA) hydrolase family HDN1F_27100 PF00561 alpha/beta hydrolase fold HDN1F_27120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_27120 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_27130 PF01613 Flavin reductase like domain HDN1F_27170 PF03595 Voltage-dependent anion channel HDN1F_27180 PF00196 Bacterial regulatory proteins, luxR family HDN1F_27180 PF00072 Response regulator receiver domain HDN1F_27190 PF17200 Single Cache domain 2 HDN1F_27190 PF07730 Histidine kinase HDN1F_27200 PF01590 GAF domain HDN1F_27200 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_27200 PF00360 Phytochrome region HDN1F_27200 PF00563 EAL domain HDN1F_27210 PF00115 Cytochrome C and Quinol oxidase polypeptide I HDN1F_27240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_27240 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HDN1F_27270 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_27270 PF03707 Bacterial signalling protein N terminal repeat HDN1F_27270 PF13188 PAS domain HDN1F_27270 PF00563 EAL domain HDN1F_27310 PF11849 Domain of unknown function (DUF3369) HDN1F_27330 PF02163 Peptidase family M50 HDN1F_27350 PF06250 YhcG PDDEXK nuclease domain HDN1F_27350 PF17761 DUF1016 N-terminal domain HDN1F_27360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HDN1F_27370 PF13193 AMP-binding enzyme C-terminal domain HDN1F_27370 PF00501 AMP-binding enzyme HDN1F_27380 PF01144 Coenzyme A transferase HDN1F_27420 PF03060 Nitronate monooxygenase HDN1F_27430 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_27440 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_27440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_27440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_27450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_27450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_27450 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_27460 PF02803 Thiolase, C-terminal domain HDN1F_27460 PF00108 Thiolase, N-terminal domain HDN1F_27480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_27480 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_27480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_27490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_27490 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_27490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_27500 PF13593 SBF-like CPA transporter family (DUF4137) HDN1F_27510 PF04343 Protein of unknown function, DUF488 HDN1F_27520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_27520 PF00672 HAMP domain HDN1F_27520 PF02743 Cache domain HDN1F_27530 PF03167 Uracil DNA glycosylase superfamily HDN1F_27540 PF04542 Sigma-70 region 2 HDN1F_27540 PF00140 Sigma-70 factor, region 1.2 HDN1F_27540 PF03979 Sigma-70 factor, region 1.1 HDN1F_27540 PF04546 Sigma-70, non-essential region HDN1F_27540 PF04545 Sigma-70, region 4 HDN1F_27540 PF04539 Sigma-70 region 3 HDN1F_27550 PF08275 DNA primase catalytic core, N-terminal domain HDN1F_27550 PF01807 CHC2 zinc finger HDN1F_27550 PF10410 DnaB-helicase binding domain of primase HDN1F_27550 PF13662 Toprim domain HDN1F_27550 PF08278 DNA primase DnaG DnaB-binding HDN1F_27560 PF09424 Yqey-like protein HDN1F_27570 PF01165 Ribosomal protein S21 HDN1F_27580 PF00814 Glycoprotease family HDN1F_27590 PF02660 Glycerol-3-phosphate acyltransferase HDN1F_27600 PF02152 Dihydroneopterin aldolase HDN1F_27610 PF01227 GTP cyclohydrolase I HDN1F_27610 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HDN1F_27620 PF01966 HD domain HDN1F_27620 PF01743 Poly A polymerase head domain HDN1F_27620 PF12627 Probable RNA and SrmB- binding site of polymerase A HDN1F_27630 PF01209 ubiE/COQ5 methyltransferase family HDN1F_27650 PF00440 Bacterial regulatory proteins, tetR family HDN1F_27660 PF06974 Protein of unknown function (DUF1298) HDN1F_27660 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HDN1F_27670 PF00106 short chain dehydrogenase HDN1F_27700 PF03109 ABC1 family HDN1F_27710 PF01553 Acyltransferase HDN1F_27720 PF01370 NAD dependent epimerase/dehydratase family HDN1F_27750 PF03109 ABC1 family HDN1F_27770 PF01464 Transglycosylase SLT domain HDN1F_27770 PF14718 Soluble lytic murein transglycosylase L domain HDN1F_27790 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_27790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_27790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_27800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_27800 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_27800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_27860 PF00691 OmpA family HDN1F_27860 PF13677 Membrane MotB of proton-channel complex MotA/MotB HDN1F_27920 PF02627 Carboxymuconolactone decarboxylase family HDN1F_27940 PF00270 DEAD/DEAH box helicase HDN1F_27940 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HDN1F_27940 PF17191 RecG wedge domain HDN1F_27950 PF00589 Phage integrase family HDN1F_27950 PF02899 Phage integrase, N-terminal SAM-like domain HDN1F_28000 PF00543 Nitrogen regulatory protein P-II HDN1F_28020 PF17284 Spermidine synthase tetramerisation domain HDN1F_28030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HDN1F_28030 PF17944 Arginine decarboxylase C-terminal helical extension HDN1F_28030 PF17810 Arginine decarboxylase helical bundle domain HDN1F_28050 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HDN1F_28060 PF13667 ThiC-associated domain HDN1F_28060 PF01964 Radical SAM ThiC family HDN1F_28080 PF07690 Major Facilitator Superfamily HDN1F_28090 PF07685 CobB/CobQ-like glutamine amidotransferase domain HDN1F_28090 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HDN1F_28100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HDN1F_28120 PF04186 FxsA cytoplasmic membrane protein HDN1F_28130 PF00166 Chaperonin 10 Kd subunit HDN1F_28140 PF00118 TCP-1/cpn60 chaperonin family HDN1F_28160 PF00563 EAL domain HDN1F_28160 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_28160 PF03707 Bacterial signalling protein N terminal repeat HDN1F_28160 PF13188 PAS domain HDN1F_28170 PF00563 EAL domain HDN1F_28170 PF00360 Phytochrome region HDN1F_28170 PF01590 GAF domain HDN1F_28170 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_28180 PF01842 ACT domain HDN1F_28180 PF08335 GlnD PII-uridylyltransferase HDN1F_28180 PF01966 HD domain HDN1F_28180 PF01909 Nucleotidyltransferase domain HDN1F_28190 PF00557 Metallopeptidase family M24 HDN1F_28200 PF00318 Ribosomal protein S2 HDN1F_28210 PF00889 Elongation factor TS HDN1F_28220 PF00696 Amino acid kinase family HDN1F_28230 PF01765 Ribosome recycling factor HDN1F_28240 PF01255 Putative undecaprenyl diphosphate synthase HDN1F_28260 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HDN1F_28260 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HDN1F_28260 PF13288 DXP reductoisomerase C-terminal domain HDN1F_28270 PF02163 Peptidase family M50 HDN1F_28270 PF17820 PDZ domain HDN1F_28280 PF01103 Surface antigen HDN1F_28280 PF07244 Surface antigen variable number repeat HDN1F_28300 PF00132 Bacterial transferase hexapeptide (six repeats) HDN1F_28300 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HDN1F_28310 PF07977 FabA-like domain HDN1F_28320 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HDN1F_28320 PF00132 Bacterial transferase hexapeptide (six repeats) HDN1F_28330 PF02684 Lipid-A-disaccharide synthetase HDN1F_28340 PF01351 Ribonuclease HII HDN1F_28350 PF07733 Bacterial DNA polymerase III alpha NTPase domain HDN1F_28350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HDN1F_28350 PF14579 Helix-hairpin-helix motif HDN1F_28350 PF02811 PHP domain HDN1F_28350 PF01336 OB-fold nucleic acid binding domain HDN1F_28360 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HDN1F_28370 PF01925 Sulfite exporter TauE/SafE HDN1F_28400 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_28400 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_28410 PF07977 FabA-like domain HDN1F_28420 PF01578 Cytochrome C assembly protein HDN1F_28420 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HDN1F_28430 PF08534 Redoxin HDN1F_28440 PF03918 Cytochrome C biogenesis protein HDN1F_28470 PF05191 Adenylate kinase, active site lid HDN1F_28480 PF12804 MobA-like NTP transferase domain HDN1F_28490 PF00814 Glycoprotease family HDN1F_28510 PF04445 Putative SAM-dependent methyltransferase HDN1F_28520 PF01553 Acyltransferase HDN1F_28530 PF00005 ABC transporter HDN1F_28560 PF09179 TilS substrate binding domain HDN1F_28560 PF01171 PP-loop family HDN1F_28560 PF11734 TilS substrate C-terminal domain HDN1F_28570 PF00117 Glutamine amidotransferase class-I HDN1F_28570 PF06418 CTP synthase N-terminus HDN1F_28580 PF00793 DAHP synthetase I family HDN1F_28590 PF03952 Enolase, N-terminal domain HDN1F_28590 PF00113 Enolase, C-terminal TIM barrel domain HDN1F_28600 PF04977 Septum formation initiator HDN1F_28610 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HDN1F_28620 PF02542 YgbB family HDN1F_28630 PF01142 tRNA pseudouridine synthase D (TruD) HDN1F_28650 PF01551 Peptidase family M23 HDN1F_28650 PF01476 LysM domain HDN1F_28660 PF04545 Sigma-70, region 4 HDN1F_28660 PF00140 Sigma-70 factor, region 1.2 HDN1F_28660 PF04539 Sigma-70 region 3 HDN1F_28660 PF04542 Sigma-70 region 2 HDN1F_28680 PF07859 alpha/beta hydrolase fold HDN1F_28690 PF00117 Glutamine amidotransferase class-I HDN1F_28690 PF00958 GMP synthase C terminal domain HDN1F_28690 PF03352 Methyladenine glycosylase HDN1F_28690 PF13673 Acetyltransferase (GNAT) domain HDN1F_28690 PF13302 Acetyltransferase (GNAT) domain HDN1F_28710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_28710 PF00072 Response regulator receiver domain HDN1F_28710 PF01627 Hpt domain HDN1F_28710 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_28720 PF17946 RecC C-terminal domain HDN1F_28730 PF13361 UvrD-like helicase C-terminal domain HDN1F_28730 PF00580 UvrD/REP helicase N-terminal domain HDN1F_28730 PF12705 PD-(D/E)XK nuclease superfamily HDN1F_28740 PF13538 UvrD-like helicase C-terminal domain HDN1F_28750 PF01053 Cys/Met metabolism PLP-dependent enzyme HDN1F_28760 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_28760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_28760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_28770 PF01926 50S ribosome-binding GTPase HDN1F_28770 PF10396 GTP-binding protein TrmE N-terminus HDN1F_28770 PF12631 MnmE helical domain HDN1F_28790 PF07690 Major Facilitator Superfamily HDN1F_28800 PF01235 Sodium:alanine symporter family HDN1F_28820 PF01113 Dihydrodipicolinate reductase, N-terminus HDN1F_28820 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain HDN1F_28830 PF00106 short chain dehydrogenase HDN1F_28840 PF12833 Helix-turn-helix domain HDN1F_28840 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_28880 PF05036 Sporulation related domain HDN1F_28890 PF05728 Uncharacterised protein family (UPF0227) HDN1F_28900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_28900 PF01751 Toprim domain HDN1F_28900 PF00986 DNA gyrase B subunit, carboxyl terminus HDN1F_28900 PF00204 DNA gyrase B HDN1F_28980 PF00665 Integrase core domain HDN1F_29030 PF00069 Protein kinase domain HDN1F_29030 PF03793 PASTA domain HDN1F_29060 PF12161 HsdM N-terminal domain HDN1F_29060 PF02384 N-6 DNA Methylase HDN1F_29070 PF12728 Helix-turn-helix domain HDN1F_29100 PF00753 Metallo-beta-lactamase superfamily HDN1F_29110 PF00360 Phytochrome region HDN1F_29110 PF00563 EAL domain HDN1F_29110 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_29110 PF01590 GAF domain HDN1F_29130 PF01292 Prokaryotic cytochrome b561 HDN1F_29140 PF00672 HAMP domain HDN1F_29140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_29140 PF02203 Tar ligand binding domain homologue HDN1F_29150 PF00561 alpha/beta hydrolase fold HDN1F_29150 PF00106 short chain dehydrogenase HDN1F_29160 PF12806 Acetyl-CoA dehydrogenase C-terminal like HDN1F_29160 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_29160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_29160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_29180 PF01553 Acyltransferase HDN1F_29190 PF00271 Helicase conserved C-terminal domain HDN1F_29190 PF00270 DEAD/DEAH box helicase HDN1F_29200 PF01435 Peptidase family M48 HDN1F_29210 PF04011 LemA family HDN1F_29230 PF02649 Type I GTP cyclohydrolase folE2 HDN1F_29240 PF13545 Crp-like helix-turn-helix domain HDN1F_29240 PF00027 Cyclic nucleotide-binding domain HDN1F_29250 PF02566 OsmC-like protein HDN1F_29260 PF02675 S-adenosylmethionine decarboxylase HDN1F_29270 PF00300 Histidine phosphatase superfamily (branch 1) HDN1F_29310 PF01323 DSBA-like thioredoxin domain HDN1F_29370 PF01227 GTP cyclohydrolase I HDN1F_29390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_29400 PF02687 FtsX-like permease family HDN1F_29400 PF12704 MacB-like periplasmic core domain HDN1F_29400 PF00005 ABC transporter HDN1F_29410 PF01593 Flavin containing amine oxidoreductase HDN1F_29420 PF01593 Flavin containing amine oxidoreductase HDN1F_29440 PF00510 Cytochrome c oxidase subunit III HDN1F_29450 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HDN1F_29480 PF07859 alpha/beta hydrolase fold HDN1F_29490 PF01497 Periplasmic binding protein HDN1F_29500 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HDN1F_29500 PF06974 Protein of unknown function (DUF1298) HDN1F_29510 PF13847 Methyltransferase domain HDN1F_29510 PF10119 Predicted methyltransferase regulatory domain HDN1F_29520 PF00005 ABC transporter HDN1F_29530 PF01061 ABC-2 type transporter HDN1F_29540 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HDN1F_29540 PF14489 QueF-like protein HDN1F_29570 PF02705 K+ potassium transporter HDN1F_29580 PF00211 Adenylate and Guanylate cyclase catalytic domain HDN1F_29610 PF13495 Phage integrase, N-terminal SAM-like domain HDN1F_29610 PF00589 Phage integrase family HDN1F_29630 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_29730 PF05717 IS66 Orf2 like protein HDN1F_29740 PF03050 Transposase IS66 family HDN1F_29740 PF13817 IS66 C-terminal element HDN1F_29740 PF13007 Transposase C of IS166 homeodomain HDN1F_29740 PF13005 zinc-finger binding domain of transposase IS66 HDN1F_29800 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_29810 PF13007 Transposase C of IS166 homeodomain HDN1F_29810 PF03050 Transposase IS66 family HDN1F_29810 PF13005 zinc-finger binding domain of transposase IS66 HDN1F_29810 PF13817 IS66 C-terminal element HDN1F_29820 PF05717 IS66 Orf2 like protein HDN1F_29930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_30010 PF01844 HNH endonuclease HDN1F_30080 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_30170 PF01618 MotA/TolQ/ExbB proton channel family HDN1F_30210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HDN1F_30210 PF11890 Domain of unknown function (DUF3410) HDN1F_30210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HDN1F_30230 PF01435 Peptidase family M48 HDN1F_30240 PF00743 Flavin-binding monooxygenase-like HDN1F_30250 PF01266 FAD dependent oxidoreductase HDN1F_30260 PF03601 Conserved hypothetical protein 698 HDN1F_30270 PF03466 LysR substrate binding domain HDN1F_30270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_30280 PF02463 RecF/RecN/SMC N terminal domain HDN1F_30290 PF04354 ZipA, C-terminal FtsZ-binding domain HDN1F_30300 PF00533 BRCA1 C Terminus (BRCT) domain HDN1F_30300 PF01653 NAD-dependent DNA ligase adenylation domain HDN1F_30300 PF03120 NAD-dependent DNA ligase OB-fold domain HDN1F_30300 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HDN1F_30300 PF12826 Helix-hairpin-helix motif HDN1F_30320 PF01266 FAD dependent oxidoreductase HDN1F_30320 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HDN1F_30350 PF05433 Glycine zipper 2TM domain HDN1F_30390 PF02803 Thiolase, C-terminal domain HDN1F_30390 PF00108 Thiolase, N-terminal domain HDN1F_30400 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_30400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HDN1F_30400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HDN1F_30450 PF01882 Protein of unknown function DUF58 HDN1F_30460 PF17863 AAA lid domain HDN1F_30460 PF07726 ATPase family associated with various cellular activities (AAA) HDN1F_30500 PF04055 Radical SAM superfamily HDN1F_30500 PF06969 HemN C-terminal domain HDN1F_30550 PF00067 Cytochrome P450 HDN1F_30560 PF03239 Iron permease FTR1 family HDN1F_30570 PF00939 Sodium:sulfate symporter transmembrane region HDN1F_30590 PF00202 Aminotransferase class-III HDN1F_30600 PF00583 Acetyltransferase (GNAT) family HDN1F_30610 PF01047 MarR family HDN1F_30620 PF00732 GMC oxidoreductase HDN1F_30620 PF05199 GMC oxidoreductase HDN1F_30630 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) HDN1F_30640 PF02673 Bacitracin resistance protein BacA HDN1F_30660 PF01070 FMN-dependent dehydrogenase HDN1F_30670 PF05088 Bacterial NAD-glutamate dehydrogenase HDN1F_30690 PF00155 Aminotransferase class I and II HDN1F_30700 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HDN1F_30700 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_30710 PF01493 GXGXG motif HDN1F_30710 PF01645 Conserved region in glutamate synthase HDN1F_30710 PF04898 Glutamate synthase central domain HDN1F_30710 PF00310 Glutamine amidotransferases class-II HDN1F_30720 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HDN1F_30750 PF02954 Bacterial regulatory protein, Fis family HDN1F_30750 PF00158 Sigma-54 interaction domain HDN1F_30750 PF00072 Response regulator receiver domain HDN1F_30760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_30760 PF00989 PAS fold HDN1F_30760 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_30770 PF03951 Glutamine synthetase, beta-Grasp domain HDN1F_30770 PF00120 Glutamine synthetase, catalytic domain HDN1F_30790 PF03884 DNA gyrase inhibitor YacG HDN1F_30800 PF01121 Dephospho-CoA kinase HDN1F_30810 PF01381 Helix-turn-helix HDN1F_30820 PF05973 Phage derived protein Gp49-like (DUF891) HDN1F_30830 PF01478 Type IV leader peptidase family HDN1F_30830 PF06750 Bacterial Peptidase A24 N-terminal domain HDN1F_30840 PF00482 Type II secretion system (T2SS), protein F HDN1F_30850 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HDN1F_30850 PF00437 Type II/IV secretion system protein HDN1F_30860 PF00114 Pilin (bacterial filament) HDN1F_30860 PF07963 Prokaryotic N-terminal methylation motif HDN1F_30880 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system HDN1F_30890 PF01381 Helix-turn-helix HDN1F_30910 PF00535 Glycosyl transferase family 2 HDN1F_31010 PF02350 UDP-N-acetylglucosamine 2-epimerase HDN1F_31030 PF00534 Glycosyl transferases group 1 HDN1F_31030 PF13439 Glycosyltransferase Family 4 HDN1F_31040 PF00270 DEAD/DEAH box helicase HDN1F_31040 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HDN1F_31040 PF17191 RecG wedge domain HDN1F_31080 PF08681 Protein of unknown function (DUF1778) HDN1F_31090 PF13784 Fic/DOC family N-terminal HDN1F_31090 PF02661 Fic/DOC family HDN1F_31110 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_31140 PF03358 NADPH-dependent FMN reductase HDN1F_31190 PF00672 HAMP domain HDN1F_31190 PF02743 Cache domain HDN1F_31190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_31200 PF00011 Hsp20/alpha crystallin family HDN1F_31250 PF00440 Bacterial regulatory proteins, tetR family HDN1F_31260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_31280 PF00005 ABC transporter HDN1F_31360 PF09820 Predicted AAA-ATPase HDN1F_31360 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_31390 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_31390 PF09820 Predicted AAA-ATPase HDN1F_31400 PF01850 PIN domain HDN1F_31410 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HDN1F_31420 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_31420 PF09820 Predicted AAA-ATPase HDN1F_31460 PF01180 Dihydroorotate dehydrogenase HDN1F_31490 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HDN1F_31500 PF10672 S-adenosylmethionine-dependent methyltransferase HDN1F_31500 PF02926 THUMP domain HDN1F_31500 PF01170 Putative RNA methylase family UPF0020 HDN1F_31560 PF00700 Bacterial flagellin C-terminal helical region HDN1F_31560 PF00669 Bacterial flagellin N-terminal helical region HDN1F_31580 PF07196 Flagellin hook IN motif HDN1F_31580 PF07195 Flagellar hook-associated protein 2 C-terminus HDN1F_31580 PF02465 Flagellar hook-associated protein 2 N-terminus HDN1F_31610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HDN1F_31630 PF00072 Response regulator receiver domain HDN1F_31630 PF00158 Sigma-54 interaction domain HDN1F_31630 PF02954 Bacterial regulatory protein, Fis family HDN1F_31640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_31640 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_31640 PF08447 PAS fold HDN1F_31640 PF00989 PAS fold HDN1F_31650 PF00072 Response regulator receiver domain HDN1F_31650 PF02954 Bacterial regulatory protein, Fis family HDN1F_31650 PF00158 Sigma-54 interaction domain HDN1F_31660 PF02049 Flagellar hook-basal body complex protein FliE HDN1F_31670 PF08345 Flagellar M-ring protein C-terminal HDN1F_31670 PF01514 Secretory protein of YscJ/FliF family HDN1F_31680 PF14842 FliG N-terminal domain HDN1F_31680 PF14841 FliG middle domain HDN1F_31680 PF01706 FliG C-terminal domain HDN1F_31700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HDN1F_31700 PF18269 T3SS EscN ATPase C-terminal domain HDN1F_31720 PF00072 Response regulator receiver domain HDN1F_31730 PF03975 CheD chemotactic sensory transduction HDN1F_31750 PF13466 STAS domain HDN1F_31760 PF00486 Transcriptional regulatory protein, C terminal HDN1F_31760 PF00072 Response regulator receiver domain HDN1F_31780 PF00072 Response regulator receiver domain HDN1F_31860 PF10609 NUBPL iron-transfer P-loop NTPase HDN1F_31860 PF01883 Iron-sulfur cluster assembly protein HDN1F_31870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_31870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_31870 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_31890 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HDN1F_31900 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_31900 PF03707 Bacterial signalling protein N terminal repeat HDN1F_31900 PF00563 EAL domain HDN1F_31920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HDN1F_31920 PF00205 Thiamine pyrophosphate enzyme, central domain HDN1F_31920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HDN1F_31950 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_31950 PF03707 Bacterial signalling protein N terminal repeat HDN1F_31950 PF00563 EAL domain HDN1F_31960 PF13638 PIN domain HDN1F_31960 PF02562 PhoH-like protein HDN1F_32000 PF00171 Aldehyde dehydrogenase family HDN1F_32010 PF00919 Uncharacterized protein family UPF0004 HDN1F_32010 PF18693 TRAM domain HDN1F_32010 PF04055 Radical SAM superfamily HDN1F_32020 PF01177 Asp/Glu/Hydantoin racemase HDN1F_32040 PF12833 Helix-turn-helix domain HDN1F_32040 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_32060 PF01925 Sulfite exporter TauE/SafE HDN1F_32080 PF02803 Thiolase, C-terminal domain HDN1F_32080 PF00108 Thiolase, N-terminal domain HDN1F_32090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HDN1F_32090 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_32100 PF00849 RNA pseudouridylate synthase HDN1F_32110 PF01026 TatD related DNase HDN1F_32140 PF00588 SpoU rRNA Methylase family HDN1F_32140 PF08032 RNA 2'-O ribose methyltransferase substrate binding HDN1F_32150 PF05362 Lon protease (S16) C-terminal proteolytic domain HDN1F_32150 PF13654 AAA domain HDN1F_32160 PF00749 tRNA synthetases class I (E and Q), catalytic domain HDN1F_32210 PF05199 GMC oxidoreductase HDN1F_32210 PF00732 GMC oxidoreductase HDN1F_32220 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HDN1F_32220 PF01266 FAD dependent oxidoreductase HDN1F_32230 PF08220 DeoR-like helix-turn-helix domain HDN1F_32230 PF00455 DeoR C terminal sensor domain HDN1F_32240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HDN1F_32240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HDN1F_32250 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HDN1F_32250 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HDN1F_32260 PF00202 Aminotransferase class-III HDN1F_32280 PF00462 Glutaredoxin HDN1F_32300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_32300 PF00672 HAMP domain HDN1F_32310 PF01739 CheR methyltransferase, SAM binding domain HDN1F_32310 PF03705 CheR methyltransferase, all-alpha domain HDN1F_32330 PF01336 OB-fold nucleic acid binding domain HDN1F_32330 PF00152 tRNA synthetases class II (D, K and N) HDN1F_32340 PF00929 Exonuclease HDN1F_32360 PF00764 Arginosuccinate synthase HDN1F_32370 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_32370 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_32370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_32370 PF00672 HAMP domain HDN1F_32370 PF00072 Response regulator receiver domain HDN1F_32370 PF01627 Hpt domain HDN1F_32380 PF00563 EAL domain HDN1F_32380 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_32380 PF08447 PAS fold HDN1F_32380 PF08448 PAS fold HDN1F_32390 PF03966 Trm112p-like protein HDN1F_32400 PF00633 Helix-hairpin-helix motif HDN1F_32400 PF00730 HhH-GPD superfamily base excision DNA repair protein HDN1F_32400 PF10576 Iron-sulfur binding domain of endonuclease III HDN1F_32410 PF04060 Putative Fe-S cluster HDN1F_32420 PF09334 tRNA synthetases class I (M) HDN1F_32420 PF01588 Putative tRNA binding domain HDN1F_32430 PF10609 NUBPL iron-transfer P-loop NTPase HDN1F_32440 PF00692 dUTPase HDN1F_32450 PF03741 Integral membrane protein TerC family HDN1F_32460 PF03707 Bacterial signalling protein N terminal repeat HDN1F_32460 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_32460 PF00563 EAL domain HDN1F_32500 PF13007 Transposase C of IS166 homeodomain HDN1F_32500 PF13005 zinc-finger binding domain of transposase IS66 HDN1F_32500 PF03050 Transposase IS66 family HDN1F_32500 PF13817 IS66 C-terminal element HDN1F_32510 PF05717 IS66 Orf2 like protein HDN1F_32540 PF00551 Formyl transferase HDN1F_32550 PF02769 AIR synthase related protein, C-terminal domain HDN1F_32550 PF00586 AIR synthase related protein, N-terminal domain HDN1F_32570 PF08299 Bacterial dnaA protein helix-turn-helix HDN1F_32570 PF11638 DnaA N-terminal domain HDN1F_32570 PF00308 Bacterial dnaA protein HDN1F_32580 PF01627 Hpt domain HDN1F_32580 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_32580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_32580 PF00072 Response regulator receiver domain HDN1F_32590 PF00294 pfkB family carbohydrate kinase HDN1F_32610 PF17863 AAA lid domain HDN1F_32610 PF07726 ATPase family associated with various cellular activities (AAA) HDN1F_32670 PF03960 ArsC family HDN1F_32720 PF05230 MASE2 domain HDN1F_32720 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_32730 PF04073 Aminoacyl-tRNA editing domain HDN1F_32730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HDN1F_32730 PF03129 Anticodon binding domain HDN1F_32750 PF02938 GAD domain HDN1F_32750 PF00152 tRNA synthetases class II (D, K and N) HDN1F_32750 PF01336 OB-fold nucleic acid binding domain HDN1F_32760 PF02075 Crossover junction endodeoxyribonuclease RuvC HDN1F_32770 PF01330 RuvA N terminal domain HDN1F_32770 PF07499 RuvA, C-terminal domain HDN1F_32780 PF17864 RuvB AAA lid domain HDN1F_32780 PF05496 Holliday junction DNA helicase RuvB P-loop domain HDN1F_32780 PF05491 RuvB C-terminal winged helix domain HDN1F_32790 PF03061 Thioesterase superfamily HDN1F_32800 PF01618 MotA/TolQ/ExbB proton channel family HDN1F_32810 PF02472 Biopolymer transport protein ExbD/TolR HDN1F_32830 PF07676 WD40-like Beta Propeller Repeat HDN1F_32830 PF04052 TolB amino-terminal domain HDN1F_32840 PF00691 OmpA family HDN1F_32860 PF04055 Radical SAM superfamily HDN1F_32870 PF06508 Queuosine biosynthesis protein QueC HDN1F_32890 PF02445 Quinolinate synthetase A protein HDN1F_32900 PF13181 Tetratricopeptide repeat HDN1F_32900 PF01435 Peptidase family M48 HDN1F_32910 PF01206 Sulfurtransferase TusA HDN1F_32920 PF01594 AI-2E family transporter HDN1F_32930 PF00578 AhpC/TSA family HDN1F_32940 PF01842 ACT domain HDN1F_32950 PF00701 Dihydrodipicolinate synthetase family HDN1F_32970 PF01259 SAICAR synthetase HDN1F_32990 PF03435 Saccharopine dehydrogenase NADP binding domain HDN1F_33010 PF00440 Bacterial regulatory proteins, tetR family HDN1F_33020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HDN1F_33020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HDN1F_33030 PF03116 NQR2, RnfD, RnfE family HDN1F_33050 PF00072 Response regulator receiver domain HDN1F_33060 PF03009 Glycerophosphoryl diester phosphodiesterase family HDN1F_33070 PF00795 Carbon-nitrogen hydrolase HDN1F_33080 PF04371 Porphyromonas-type peptidyl-arginine deiminase HDN1F_33100 PF02687 FtsX-like permease family HDN1F_33100 PF12704 MacB-like periplasmic core domain HDN1F_33110 PF00005 ABC transporter HDN1F_33120 PF03772 Competence protein HDN1F_33120 PF00753 Metallo-beta-lactamase superfamily HDN1F_33130 PF01618 MotA/TolQ/ExbB proton channel family HDN1F_33140 PF02472 Biopolymer transport protein ExbD/TolR HDN1F_33150 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HDN1F_33160 PF02348 Cytidylyltransferase HDN1F_33170 PF01451 Low molecular weight phosphotyrosine protein phosphatase HDN1F_33180 PF01565 FAD binding domain HDN1F_33180 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HDN1F_33190 PF00575 S1 RNA binding domain HDN1F_33190 PF12111 Polyribonucleotide phosphorylase C terminal HDN1F_33190 PF10150 Ribonuclease E/G family HDN1F_33210 PF00849 RNA pseudouridylate synthase HDN1F_33210 PF01479 S4 domain HDN1F_33220 PF13419 Haloacid dehalogenase-like hydrolase HDN1F_33230 PF06965 Na+/H+ antiporter 1 HDN1F_33230 PF01343 Peptidase family S49 HDN1F_33240 PF00440 Bacterial regulatory proteins, tetR family HDN1F_33240 PF08361 MAATS-type transcriptional repressor, C-terminal region HDN1F_33250 PF02545 Maf-like protein HDN1F_33260 PF02620 Large ribosomal RNA subunit accumulation protein YceD HDN1F_33270 PF01783 Ribosomal L32p protein family HDN1F_33280 PF02504 Fatty acid synthesis protein HDN1F_33290 PF00698 Acyl transferase domain HDN1F_33310 PF00550 Phosphopantetheine attachment site HDN1F_33320 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_33320 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_33330 PF01063 Amino-transferase class IV HDN1F_33340 PF02618 YceG-like family HDN1F_33350 PF02223 Thymidylate kinase HDN1F_33360 PF09115 DNA polymerase III, delta subunit, C terminal HDN1F_33380 PF02646 RmuC family HDN1F_33400 PF03764 Elongation factor G, domain IV HDN1F_33400 PF03144 Elongation factor Tu domain 2 HDN1F_33400 PF00009 Elongation factor Tu GTP binding domain HDN1F_33400 PF14492 Elongation Factor G, domain II HDN1F_33400 PF00679 Elongation factor G C-terminus HDN1F_33420 PF00440 Bacterial regulatory proteins, tetR family HDN1F_33440 PF01627 Hpt domain HDN1F_33440 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_33440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_33440 PF00672 HAMP domain HDN1F_33440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_33440 PF00072 Response regulator receiver domain HDN1F_33480 PF00749 tRNA synthetases class I (E and Q), catalytic domain HDN1F_33480 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HDN1F_33540 PF04286 Protein of unknown function (DUF445) HDN1F_33560 PF12169 DNA polymerase III subunits gamma and tau domain III HDN1F_33560 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HDN1F_33560 PF12170 DNA polymerase III tau subunit V interacting with alpha HDN1F_33570 PF02575 YbaB/EbfC DNA-binding family HDN1F_33580 PF02132 RecR protein HDN1F_33580 PF13662 Toprim domain HDN1F_33600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_33600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_33600 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_33610 PF00570 HRDC domain HDN1F_33610 PF01612 3'-5' exonuclease HDN1F_33620 PF05166 YcgL domain HDN1F_33680 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_33680 PF17862 AAA+ lid domain HDN1F_33680 PF01434 Peptidase family M41 HDN1F_33700 PF01575 MaoC like domain HDN1F_33720 PF13193 AMP-binding enzyme C-terminal domain HDN1F_33720 PF00501 AMP-binding enzyme HDN1F_33730 PF04408 Helicase associated domain (HA2) HDN1F_33730 PF11898 Domain of unknown function (DUF3418) HDN1F_33730 PF00270 DEAD/DEAH box helicase HDN1F_33730 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HDN1F_33730 PF00271 Helicase conserved C-terminal domain HDN1F_33740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HDN1F_33740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HDN1F_33750 PF04333 MlaA lipoprotein HDN1F_33810 PF00196 Bacterial regulatory proteins, luxR family HDN1F_33810 PF00072 Response regulator receiver domain HDN1F_33830 PF00923 Transaldolase/Fructose-6-phosphate aldolase HDN1F_33840 PF01207 Dihydrouridine synthase (Dus) HDN1F_33870 PF02954 Bacterial regulatory protein, Fis family HDN1F_33870 PF00158 Sigma-54 interaction domain HDN1F_33870 PF00072 Response regulator receiver domain HDN1F_33900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_33900 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_33900 PF00672 HAMP domain HDN1F_33910 PF00486 Transcriptional regulatory protein, C terminal HDN1F_33910 PF00072 Response regulator receiver domain HDN1F_33930 PF01545 Cation efflux family HDN1F_33940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HDN1F_33940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HDN1F_33950 PF01266 FAD dependent oxidoreductase HDN1F_33950 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HDN1F_33960 PF01565 FAD binding domain HDN1F_33960 PF02913 FAD linked oxidases, C-terminal domain HDN1F_33970 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_33970 PF12833 Helix-turn-helix domain HDN1F_33980 PF00106 short chain dehydrogenase HDN1F_33990 PF01625 Peptide methionine sulfoxide reductase HDN1F_34030 PF01012 Electron transfer flavoprotein domain HDN1F_34040 PF00766 Electron transfer flavoprotein FAD-binding domain HDN1F_34040 PF01012 Electron transfer flavoprotein domain HDN1F_34070 PF01467 Cytidylyltransferase-like HDN1F_34070 PF00293 NUDIX domain HDN1F_34120 PF18541 RuvC endonuclease subdomain 3 HDN1F_34120 PF13395 HNH endonuclease HDN1F_34150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HDN1F_34150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HDN1F_34170 PF01551 Peptidase family M23 HDN1F_34180 PF13742 OB-fold nucleic acid binding domain HDN1F_34180 PF02601 Exonuclease VII, large subunit HDN1F_34200 PF00463 Isocitrate lyase family HDN1F_34210 PF01144 Coenzyme A transferase HDN1F_34220 PF01144 Coenzyme A transferase HDN1F_34230 PF02785 Biotin carboxylase C-terminal domain HDN1F_34230 PF00289 Biotin carboxylase, N-terminal domain HDN1F_34230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HDN1F_34230 PF00364 Biotin-requiring enzyme HDN1F_34240 PF01039 Carboxyl transferase domain HDN1F_34250 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_34250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_34250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_34260 PF13411 MerR HTH family regulatory protein HDN1F_34280 PF03737 Aldolase/RraA HDN1F_34290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HDN1F_34290 PF00056 lactate/malate dehydrogenase, NAD binding domain HDN1F_34320 PF01722 BolA-like protein HDN1F_34350 PF01171 PP-loop family HDN1F_34360 PF07670 Nucleoside recognition HDN1F_34370 PF03466 LysR substrate binding domain HDN1F_34370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_34380 PF01274 Malate synthase HDN1F_34410 PF08007 Cupin superfamily protein HDN1F_34420 PF00206 Lyase HDN1F_34420 PF08328 Adenylosuccinate lyase C-terminal HDN1F_34430 PF04356 Protein of unknown function (DUF489) HDN1F_34460 PF01967 MoaC family HDN1F_34470 PF02597 ThiS family HDN1F_34480 PF02391 MoaE protein HDN1F_34490 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_34500 PF00072 Response regulator receiver domain HDN1F_34500 PF00196 Bacterial regulatory proteins, luxR family HDN1F_34510 PF02151 UvrB/uvrC motif HDN1F_34510 PF08459 UvrC Helix-hairpin-helix N-terminal HDN1F_34510 PF01541 GIY-YIG catalytic domain HDN1F_34520 PF01066 CDP-alcohol phosphatidyltransferase HDN1F_34530 PF03641 Possible lysine decarboxylase HDN1F_34530 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HDN1F_34530 PF11892 Domain of unknown function (DUF3412) HDN1F_34560 PF08448 PAS fold HDN1F_34560 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_34560 PF00563 EAL domain HDN1F_34610 PF00072 Response regulator receiver domain HDN1F_34610 PF00158 Sigma-54 interaction domain HDN1F_34610 PF02954 Bacterial regulatory protein, Fis family HDN1F_34620 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_34620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_34660 PF00483 Nucleotidyl transferase HDN1F_34670 PF00342 Phosphoglucose isomerase HDN1F_34680 PF01648 4'-phosphopantetheinyl transferase superfamily HDN1F_34680 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HDN1F_34690 PF00437 Type II/IV secretion system protein HDN1F_34700 PF00482 Type II secretion system (T2SS), protein F HDN1F_34710 PF07963 Prokaryotic N-terminal methylation motif HDN1F_34710 PF08334 Type II secretion system (T2SS), protein G HDN1F_34730 PF07963 Prokaryotic N-terminal methylation motif HDN1F_34730 PF02501 Type II secretion system (T2SS), protein I HDN1F_34740 PF11612 Type II secretion system (T2SS), protein J HDN1F_34740 PF07963 Prokaryotic N-terminal methylation motif HDN1F_34750 PF03934 Type II secretion system (T2SS), protein K HDN1F_34760 PF12693 GspL periplasmic domain HDN1F_34760 PF05134 Type II secretion system (T2SS), protein L HDN1F_34780 PF01471 Putative peptidoglycan binding domain HDN1F_34780 PF13401 AAA domain HDN1F_34810 PF03109 ABC1 family HDN1F_34830 PF05661 Protein of unknown function (DUF808) HDN1F_34840 PF00210 Ferritin-like domain HDN1F_34860 PF01434 Peptidase family M41 HDN1F_34860 PF17862 AAA+ lid domain HDN1F_34860 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_34870 PF00440 Bacterial regulatory proteins, tetR family HDN1F_34870 PF17754 MftR C-terminal domain HDN1F_34930 PF13700 Domain of unknown function (DUF4158) HDN1F_34930 PF01526 Tn3 transposase DDE domain HDN1F_34940 PF00589 Phage integrase family HDN1F_34940 PF02899 Phage integrase, N-terminal SAM-like domain HDN1F_35220 PF02796 Helix-turn-helix domain of resolvase HDN1F_35220 PF00239 Resolvase, N terminal domain HDN1F_35290 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_35360 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA HDN1F_35400 PF04002 RadC-like JAB domain HDN1F_35550 PF17762 HTH domain found in ParB protein HDN1F_35550 PF02195 ParB-like nuclease domain HDN1F_35560 PF13614 AAA domain HDN1F_35580 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_35580 PF09820 Predicted AAA-ATPase HDN1F_35630 PF01207 Dihydrouridine synthase (Dus) HDN1F_35640 PF00535 Glycosyl transferase family 2 HDN1F_35680 PF00912 Transglycosylase HDN1F_35710 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HDN1F_35720 PF01464 Transglycosylase SLT domain HDN1F_35760 PF00106 short chain dehydrogenase HDN1F_35770 PF00561 alpha/beta hydrolase fold HDN1F_35780 PF00083 Sugar (and other) transporter HDN1F_35780 PF07690 Major Facilitator Superfamily HDN1F_35800 PF03734 L,D-transpeptidase catalytic domain HDN1F_35800 PF17969 L,D-transpeptidase C-terminal domain HDN1F_35810 PF01979 Amidohydrolase family HDN1F_35830 PF00005 ABC transporter HDN1F_35850 PF04262 Glutamate-cysteine ligase HDN1F_35860 PF04957 Ribosome modulation factor HDN1F_35870 PF02600 Disulfide bond formation protein DsbB HDN1F_35880 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HDN1F_35890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HDN1F_35890 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HDN1F_35910 PF00005 ABC transporter HDN1F_35910 PF12848 ABC transporter HDN1F_35940 PF12706 Beta-lactamase superfamily domain HDN1F_35960 PF00490 Delta-aminolevulinic acid dehydratase HDN1F_35980 PF00672 HAMP domain HDN1F_35980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_35980 PF12729 Four helix bundle sensory module for signal transduction HDN1F_36010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_36010 PF13492 GAF domain HDN1F_36010 PF13493 Domain of unknown function (DUF4118) HDN1F_36010 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_36010 PF02702 Osmosensitive K+ channel His kinase sensor domain HDN1F_36020 PF02669 K+-transporting ATPase, c chain HDN1F_36040 PF03814 Potassium-transporting ATPase A subunit HDN1F_36070 PF12729 Four helix bundle sensory module for signal transduction HDN1F_36070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_36070 PF00672 HAMP domain HDN1F_36080 PF17941 Polyphosphate kinase C-terminal domain 1 HDN1F_36080 PF13090 Polyphosphate kinase C-terminal domain 2 HDN1F_36080 PF13089 Polyphosphate kinase N-terminal domain HDN1F_36080 PF02503 Polyphosphate kinase middle domain HDN1F_36120 PF05199 GMC oxidoreductase HDN1F_36120 PF00732 GMC oxidoreductase HDN1F_36160 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HDN1F_36160 PF12241 Trans-2-enoyl-CoA reductase catalytic region HDN1F_36160 PF07055 Enoyl reductase FAD binding domain HDN1F_36170 PF07687 Peptidase dimerisation domain HDN1F_36170 PF01546 Peptidase family M20/M25/M40 HDN1F_36180 PF07715 TonB-dependent Receptor Plug Domain HDN1F_36180 PF00593 TonB dependent receptor HDN1F_36200 PF00472 RF-1 domain HDN1F_36250 PF02390 Putative methyltransferase HDN1F_36260 PF05690 Thiazole biosynthesis protein ThiG HDN1F_36270 PF02597 ThiS family HDN1F_36270 PF05690 Thiazole biosynthesis protein ThiG HDN1F_36280 PF13673 Acetyltransferase (GNAT) domain HDN1F_36300 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HDN1F_36310 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HDN1F_36330 PF00873 AcrB/AcrD/AcrF family HDN1F_36340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_36380 PF00561 alpha/beta hydrolase fold HDN1F_36400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_36400 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_36400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_36430 PF01116 Fructose-bisphosphate aldolase class-II HDN1F_36440 PF00162 Phosphoglycerate kinase HDN1F_36450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HDN1F_36450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HDN1F_36460 PF00456 Transketolase, thiamine diphosphate binding domain HDN1F_36460 PF02779 Transketolase, pyrimidine binding domain HDN1F_36460 PF02780 Transketolase, C-terminal domain HDN1F_36470 PF01022 Bacterial regulatory protein, arsR family HDN1F_36480 PF00438 S-adenosylmethionine synthetase, N-terminal domain HDN1F_36480 PF02772 S-adenosylmethionine synthetase, central domain HDN1F_36480 PF02773 S-adenosylmethionine synthetase, C-terminal domain HDN1F_36490 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HDN1F_36490 PF05221 S-adenosyl-L-homocysteine hydrolase HDN1F_36500 PF02219 Methylenetetrahydrofolate reductase HDN1F_36510 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_36510 PF09820 Predicted AAA-ATPase HDN1F_36550 PF00202 Aminotransferase class-III HDN1F_36560 PF07715 TonB-dependent Receptor Plug Domain HDN1F_36560 PF00593 TonB dependent receptor HDN1F_36650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_36650 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_36650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_36680 PF00743 Flavin-binding monooxygenase-like HDN1F_36690 PF07859 alpha/beta hydrolase fold HDN1F_36740 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HDN1F_36770 PF04452 RNA methyltransferase HDN1F_36790 PF01339 CheB methylesterase HDN1F_36790 PF00072 Response regulator receiver domain HDN1F_36800 PF01584 CheW-like domain HDN1F_36800 PF07194 P2 response regulator binding domain HDN1F_36800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_36800 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_36800 PF01627 Hpt domain HDN1F_36810 PF01739 CheR methyltransferase, SAM binding domain HDN1F_36810 PF03705 CheR methyltransferase, all-alpha domain HDN1F_36820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_36820 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HDN1F_36830 PF01584 CheW-like domain HDN1F_36840 PF00072 Response regulator receiver domain HDN1F_36850 PF00072 Response regulator receiver domain HDN1F_36860 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HDN1F_36860 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HDN1F_36880 PF02622 Uncharacterized ACR, COG1678 HDN1F_36890 PF03652 Holliday junction resolvase HDN1F_36900 PF13640 2OG-Fe(II) oxygenase superfamily HDN1F_36900 PF18331 PKHD-type hydroxylase C-terminal domain HDN1F_36910 PF01070 FMN-dependent dehydrogenase HDN1F_36920 PF07715 TonB-dependent Receptor Plug Domain HDN1F_36920 PF00593 TonB dependent receptor HDN1F_36940 PF02472 Biopolymer transport protein ExbD/TolR HDN1F_36950 PF01618 MotA/TolQ/ExbB proton channel family HDN1F_36960 PF09820 Predicted AAA-ATPase HDN1F_36960 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_36990 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_36990 PF09820 Predicted AAA-ATPase HDN1F_37010 PF06463 Molybdenum Cofactor Synthesis C HDN1F_37010 PF04055 Radical SAM superfamily HDN1F_37020 PF17805 AsnC-like ligand binding domain HDN1F_37030 PF17805 AsnC-like ligand binding domain HDN1F_37050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_37060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_37070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_37090 PF08406 CbbQ/NirQ/NorQ C-terminal HDN1F_37090 PF07728 AAA domain (dynein-related subfamily) HDN1F_37100 PF00115 Cytochrome C and Quinol oxidase polypeptide I HDN1F_37110 PF00034 Cytochrome c HDN1F_37130 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HDN1F_37130 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HDN1F_37140 PF01979 Amidohydrolase family HDN1F_37150 PF00440 Bacterial regulatory proteins, tetR family HDN1F_37150 PF08359 YsiA-like protein, C-terminal region HDN1F_37160 PF00563 EAL domain HDN1F_37160 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_37160 PF03707 Bacterial signalling protein N terminal repeat HDN1F_37160 PF13188 PAS domain HDN1F_37170 PF01339 CheB methylesterase HDN1F_37180 PF01739 CheR methyltransferase, SAM binding domain HDN1F_37180 PF03705 CheR methyltransferase, all-alpha domain HDN1F_37190 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_37190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_37190 PF00072 Response regulator receiver domain HDN1F_37190 PF09308 LuxQ, periplasmic HDN1F_37240 PF08681 Protein of unknown function (DUF1778) HDN1F_37250 PF00437 Type II/IV secretion system protein HDN1F_37260 PF00437 Type II/IV secretion system protein HDN1F_37300 PF01168 Alanine racemase, N-terminal domain HDN1F_37310 PF14748 Pyrroline-5-carboxylate reductase dimerisation HDN1F_37310 PF03807 NADP oxidoreductase coenzyme F420-dependent HDN1F_37320 PF02325 YGGT family HDN1F_37330 PF02594 Uncharacterised ACR, YggU family COG1872 HDN1F_37370 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HDN1F_37400 PF12728 Helix-turn-helix domain HDN1F_37540 PF12679 ABC-2 family transporter protein HDN1F_37550 PF00005 ABC transporter HDN1F_37560 PF05048 Periplasmic copper-binding protein (NosD) HDN1F_37570 PF12801 4Fe-4S binding domain HDN1F_37570 PF04205 FMN-binding domain HDN1F_37580 PF13473 Cupredoxin-like domain HDN1F_37580 PF18764 Nitrous oxide reductase propeller repeat HDN1F_37580 PF18793 Nitrous oxide reductase propeller repeat 2 HDN1F_37590 PF00106 short chain dehydrogenase HDN1F_37630 PF00149 Calcineurin-like phosphoesterase HDN1F_37640 PF01476 LysM domain HDN1F_37650 PF01327 Polypeptide deformylase HDN1F_37660 PF00551 Formyl transferase HDN1F_37660 PF02911 Formyl transferase, C-terminal domain HDN1F_37670 PF01189 16S rRNA methyltransferase RsmB/F HDN1F_37670 PF01029 NusB family HDN1F_37690 PF07075 Protein of unknown function (DUF1343) HDN1F_37720 PF00301 Rubredoxin HDN1F_37770 PF03061 Thioesterase superfamily HDN1F_37780 PF00580 UvrD/REP helicase N-terminal domain HDN1F_37780 PF13361 UvrD-like helicase C-terminal domain HDN1F_37800 PF07044 Protein of unknown function (DUF1329) HDN1F_37840 PF03734 L,D-transpeptidase catalytic domain HDN1F_37840 PF01476 LysM domain HDN1F_37840 PF17969 L,D-transpeptidase C-terminal domain HDN1F_37890 PF00877 NlpC/P60 family HDN1F_37910 PF01380 SIS domain HDN1F_37920 PF12804 MobA-like NTP transferase domain HDN1F_37920 PF14602 Hexapeptide repeat of succinyl-transferase HDN1F_37920 PF00132 Bacterial transferase hexapeptide (six repeats) HDN1F_37930 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HDN1F_37930 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HDN1F_37940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HDN1F_37940 PF02874 ATP synthase alpha/beta family, beta-barrel domain HDN1F_37950 PF00231 ATP synthase HDN1F_37960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HDN1F_37960 PF02874 ATP synthase alpha/beta family, beta-barrel domain HDN1F_37960 PF00306 ATP synthase alpha/beta chain, C terminal domain HDN1F_37970 PF00213 ATP synthase delta (OSCP) subunit HDN1F_37980 PF00430 ATP synthase B/B' CF(0) HDN1F_37990 PF00137 ATP synthase subunit C HDN1F_38000 PF00119 ATP synthase A chain HDN1F_38010 PF03899 ATP synthase I chain HDN1F_38020 PF02195 ParB-like nuclease domain HDN1F_38020 PF17762 HTH domain found in ParB protein HDN1F_38030 PF13614 AAA domain HDN1F_38040 PF02527 rRNA small subunit methyltransferase G HDN1F_38050 PF01134 Glucose inhibited division protein A HDN1F_38050 PF13932 GidA associated domain HDN1F_38060 PF12631 MnmE helical domain HDN1F_38060 PF01926 50S ribosome-binding GTPase HDN1F_38060 PF10396 GTP-binding protein TrmE N-terminus HDN1F_38070 PF14849 YidC periplasmic domain HDN1F_38070 PF02096 60Kd inner membrane protein HDN1F_38080 PF00825 Ribonuclease P