locus-tag class description Halar_0001 PF12950 TaqI-like C-terminal specificity domain Halar_0001 PF07669 Eco57I restriction-modification methylase Halar_0031 PF04555 Restriction endonuclease XhoI Halar_0049 PF00176 SNF2 family N-terminal domain Halar_0049 PF00271 Helicase conserved C-terminal domain Halar_0055 PF02899 Phage integrase, N-terminal SAM-like domain Halar_0055 PF00589 Phage integrase family Halar_0061 PF02601 Exonuclease VII, large subunit Halar_0061 PF13742 OB-fold nucleic acid binding domain Halar_0087 PF13732 Domain of unknown function (DUF4162) Halar_0087 PF00005 ABC transporter Halar_0106 PF00176 SNF2 family N-terminal domain Halar_0106 PF00271 Helicase conserved C-terminal domain Halar_0127 PF03747 ADP-ribosylglycohydrolase Halar_0130 PF00582 Universal stress protein family Halar_0141 PF07728 AAA domain (dynein-related subfamily) Halar_0141 PF12102 Domain of unknown function (DUF3578) Halar_0148 PF02086 D12 class N6 adenine-specific DNA methyltransferase Halar_0153 PF00271 Helicase conserved C-terminal domain Halar_0153 PF00176 SNF2 family N-terminal domain Halar_0165 PF13732 Domain of unknown function (DUF4162) Halar_0165 PF00005 ABC transporter Halar_0167 PF13026 Protein of unknown function (DUF3887) Halar_0167 PF12146 Serine aminopeptidase, S33 Halar_0170 PF13732 Domain of unknown function (DUF4162) Halar_0170 PF00005 ABC transporter Halar_0172 PF01381 Helix-turn-helix Halar_0176 PF12950 TaqI-like C-terminal specificity domain Halar_0176 PF02384 N-6 DNA Methylase Halar_0177 PF13361 UvrD-like helicase C-terminal domain Halar_0177 PF00580 UvrD/REP helicase N-terminal domain Halar_0184 PF06470 SMC proteins Flexible Hinge Domain Halar_0184 PF02463 RecF/RecN/SMC N terminal domain Halar_0186 PF00271 Helicase conserved C-terminal domain Halar_0186 PF00270 DEAD/DEAH box helicase Halar_0206 PF03747 ADP-ribosylglycohydrolase Halar_0229 PF00589 Phage integrase family Halar_0229 PF02899 Phage integrase, N-terminal SAM-like domain Halar_0234 PF00271 Helicase conserved C-terminal domain Halar_0234 PF00176 SNF2 family N-terminal domain Halar_0252 PF12705 PD-(D/E)XK nuclease superfamily Halar_0252 PF00580 UvrD/REP helicase N-terminal domain Halar_0252 PF13361 UvrD-like helicase C-terminal domain Halar_0263 PF00271 Helicase conserved C-terminal domain Halar_0263 PF00176 SNF2 family N-terminal domain Halar_0263 PF12137 RNA polymerase recycling family C-terminal Halar_0263 PF18337 RapA N-terminal Tudor like domain Halar_0263 PF18339 RapA N-terminal Tudor like domain 1 Halar_0265 PF17191 RecG wedge domain Halar_0265 PF00271 Helicase conserved C-terminal domain Halar_0265 PF00270 DEAD/DEAH box helicase Halar_0299 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_0299 PF00512 His Kinase A (phospho-acceptor) domain Halar_0299 PF07689 KaiB domain Halar_0304 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Halar_0304 PF02770 Acyl-CoA dehydrogenase, middle domain Halar_0304 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Halar_0305 PF00501 AMP-binding enzyme Halar_0305 PF13193 AMP-binding enzyme C-terminal domain Halar_0308 PF01557 Fumarylacetoacetate (FAA) hydrolase family Halar_0309 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Halar_0310 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Halar_0310 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Halar_0311 PF00528 Binding-protein-dependent transport system inner membrane component Halar_0311 PF12911 N-terminal TM domain of oligopeptide transport permease C Halar_0312 PF00528 Binding-protein-dependent transport system inner membrane component Halar_0314 PF14765 Polyketide synthase dehydratase Halar_0314 PF00550 Phosphopantetheine attachment site Halar_0314 PF00698 Acyl transferase domain Halar_0314 PF02801 Beta-ketoacyl synthase, C-terminal domain Halar_0314 PF00109 Beta-ketoacyl synthase, N-terminal domain Halar_0314 PF08659 KR domain Halar_0314 PF16197 Ketoacyl-synthetase C-terminal extension Halar_0314 PF08240 Alcohol dehydrogenase GroES-like domain Halar_0315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Halar_0315 PF00205 Thiamine pyrophosphate enzyme, central domain Halar_0315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Halar_0316 PF00355 Rieske [2Fe-2S] domain Halar_0319 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Halar_0319 PF01842 ACT domain Halar_0319 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Halar_0321 PF00005 ABC transporter Halar_0321 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_0322 PF00005 ABC transporter Halar_0322 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_0324 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Halar_0324 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Halar_0326 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Halar_0326 PF02770 Acyl-CoA dehydrogenase, middle domain Halar_0326 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Halar_0327 PF01614 Bacterial transcriptional regulator Halar_0327 PF09339 IclR helix-turn-helix domain Halar_0348 PF00512 His Kinase A (phospho-acceptor) domain Halar_0348 PF11808 Phosphate regulon sensor protein PhoR Halar_0348 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_0348 PF00989 PAS fold Halar_0350 PF02954 Bacterial regulatory protein, Fis family Halar_0350 PF00072 Response regulator receiver domain Halar_0350 PF00158 Sigma-54 interaction domain Halar_0379 PF01609 Transposase DDE domain Halar_0386 PF00176 SNF2 family N-terminal domain Halar_0386 PF00271 Helicase conserved C-terminal domain Halar_0386 PF00176 SNF2 family N-terminal domain Halar_0386 PF00271 Helicase conserved C-terminal domain Halar_0397 PF02586 SOS response associated peptidase (SRAP) Halar_0399 PF03773 Predicted permease Halar_0440 PF00534 Glycosyl transferases group 1 Halar_0452 PF00403 Heavy-metal-associated domain Halar_0453 PF00403 Heavy-metal-associated domain Halar_0455 PF00403 Heavy-metal-associated domain Halar_0455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Halar_0455 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_0460 PF01040 UbiA prenyltransferase family Halar_0463 PF00115 Cytochrome C and Quinol oxidase polypeptide I Halar_0465 PF01609 Transposase DDE domain Halar_0474 PF00027 Cyclic nucleotide-binding domain Halar_0474 PF00005 ABC transporter Halar_0485 PF01609 Transposase DDE domain Halar_0492 PF01402 Ribbon-helix-helix protein, copG family Halar_0492 PF08753 NikR C terminal nickel binding domain Halar_0496 PF13614 AAA domain Halar_0500 PF00145 C-5 cytosine-specific DNA methylase Halar_0512 PF00271 Helicase conserved C-terminal domain Halar_0512 PF00176 SNF2 family N-terminal domain Halar_0513 PF00145 C-5 cytosine-specific DNA methylase Halar_0522 PF01434 Peptidase family M41 Halar_0522 PF00004 ATPase family associated with various cellular activities (AAA) Halar_0522 PF17862 AAA+ lid domain Halar_0530 PF00004 ATPase family associated with various cellular activities (AAA) Halar_0530 PF17862 AAA+ lid domain Halar_0530 PF01434 Peptidase family M41 Halar_0535 PF00989 PAS fold Halar_0535 PF00512 His Kinase A (phospho-acceptor) domain Halar_0535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_0535 PF11808 Phosphate regulon sensor protein PhoR Halar_0568 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Halar_0568 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Halar_0568 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Halar_0587 PF00403 Heavy-metal-associated domain Halar_0598 PF13439 Glycosyltransferase Family 4 Halar_0598 PF00534 Glycosyl transferases group 1 Halar_0600 PF00534 Glycosyl transferases group 1 Halar_0600 PF13439 Glycosyltransferase Family 4 Halar_0604 PF00483 Nucleotidyl transferase Halar_0606 PF04321 RmlD substrate binding domain Halar_0607 PF16363 GDP-mannose 4,6 dehydratase Halar_0626 PF00535 Glycosyl transferase family 2 Halar_0631 PF00534 Glycosyl transferases group 1 Halar_0631 PF13439 Glycosyltransferase Family 4 Halar_0644 PF00732 GMC oxidoreductase Halar_0644 PF05199 GMC oxidoreductase Halar_0658 PF00899 ThiF family Halar_0663 PF13614 AAA domain Halar_0673 PF01609 Transposase DDE domain Halar_0678 PF00271 Helicase conserved C-terminal domain Halar_0678 PF00270 DEAD/DEAH box helicase Halar_0678 PF17191 RecG wedge domain Halar_0687 PF01609 Transposase DDE domain Halar_0701 PF00154 recA bacterial DNA recombination protein Halar_0720 PF03949 Malic enzyme, NAD binding domain Halar_0720 PF01515 Phosphate acetyl/butaryl transferase Halar_0720 PF00390 Malic enzyme, N-terminal domain Halar_0722 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Halar_0723 PF00528 Binding-protein-dependent transport system inner membrane component Halar_0725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_0725 PF00005 ABC transporter Halar_0726 PF00005 ABC transporter Halar_0726 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_0727 PF00571 CBS domain Halar_0732 PF02661 Fic/DOC family Halar_0732 PF12728 Helix-turn-helix domain Halar_0735 PF00557 Metallopeptidase family M24 Halar_0735 PF01321 Creatinase/Prolidase N-terminal domain Halar_0739 PF13180 PDZ domain Halar_0740 PF03061 Thioesterase superfamily Halar_0742 PF02577 Bifunctional nuclease Halar_0745 PF14602 Hexapeptide repeat of succinyl-transferase Halar_0750 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Halar_0751 PF01791 DeoC/LacD family aldolase Halar_0753 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Halar_0753 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Halar_0754 PF01039 Carboxyl transferase domain Halar_0757 PF03328 HpcH/HpaI aldolase/citrate lyase family Halar_0758 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Halar_0758 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Halar_0759 PF00885 6,7-dimethyl-8-ribityllumazine synthase Halar_0763 PF00248 Aldo/keto reductase family Halar_0767 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_0769 PF01406 tRNA synthetases class I (C) catalytic domain Halar_0769 PF09190 DALR domain Halar_0772 PF03328 HpcH/HpaI aldolase/citrate lyase family Halar_0774 PF01370 NAD dependent epimerase/dehydratase family Halar_0781 PF00437 Type II/IV secretion system protein Halar_0784 PF12327 FtsZ family, C-terminal domain Halar_0784 PF00091 Tubulin/FtsZ family, GTPase domain Halar_0785 PF18146 Damage-inducible protein CinA KH domain Halar_0785 PF00994 Probable molybdopterin binding domain Halar_0785 PF02464 Competence-damaged protein Halar_0793 PF08402 TOBE domain Halar_0793 PF00005 ABC transporter Halar_0794 PF00528 Binding-protein-dependent transport system inner membrane component Halar_0795 PF00528 Binding-protein-dependent transport system inner membrane component Halar_0797 PF00462 Glutaredoxin Halar_0803 PF13847 Methyltransferase domain Halar_0805 PF00809 Pterin binding enzyme Halar_0806 PF02142 MGS-like domain Halar_0806 PF01808 AICARFT/IMPCHase bienzyme Halar_0807 PF00206 Lyase Halar_0807 PF08328 Adenylosuccinate lyase C-terminal Halar_0810 PF01678 Diaminopimelate epimerase Halar_0811 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Halar_0811 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Halar_0812 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Halar_0812 PF14602 Hexapeptide repeat of succinyl-transferase Halar_0812 PF00132 Bacterial transferase hexapeptide (six repeats) Halar_0813 PF05173 Dihydrodipicolinate reductase, C-terminus Halar_0813 PF01113 Dihydrodipicolinate reductase, N-terminus Halar_0814 PF00701 Dihydrodipicolinate synthetase family Halar_0821 PF01032 FecCD transport family Halar_0822 PF00005 ABC transporter Halar_0826 PF13367 PrsW family intramembrane metalloprotease Halar_0836 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Halar_0838 PF09269 Domain of unknown function (DUF1967) Halar_0838 PF01926 50S ribosome-binding GTPase Halar_0838 PF01018 GTP1/OBG Halar_0840 PF16177 Acetyl-coenzyme A synthetase N-terminus Halar_0840 PF13193 AMP-binding enzyme C-terminal domain Halar_0840 PF00501 AMP-binding enzyme Halar_0843 PF00210 Ferritin-like domain Halar_0847 PF05343 M42 glutamyl aminopeptidase Halar_0852 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Halar_0852 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Halar_0852 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Halar_0853 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Halar_0854 PF01554 MatE Halar_0855 PF01494 FAD binding domain Halar_0856 PF00248 Aldo/keto reductase family Halar_0859 PF01343 Peptidase family S49 Halar_0862 PF00127 Copper binding proteins, plastocyanin/azurin family Halar_0869 PF00753 Metallo-beta-lactamase superfamily Halar_0869 PF10996 Beta-Casp domain Halar_0869 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Halar_0871 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Halar_0871 PF09180 Prolyl-tRNA synthetase, C-terminal Halar_0871 PF03129 Anticodon binding domain Halar_0875 PF03109 ABC1 family Halar_0876 PF00155 Aminotransferase class I and II Halar_0878 PF00719 Inorganic pyrophosphatase Halar_0886 PF02811 PHP domain Halar_0886 PF14716 Helix-hairpin-helix domain Halar_0886 PF14791 DNA polymerase beta thumb Halar_0888 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Halar_0891 PF13367 PrsW family intramembrane metalloprotease Halar_0895 PF08669 Glycine cleavage T-protein C-terminal barrel domain Halar_0895 PF01571 Aminomethyltransferase folate-binding domain Halar_0902 PF17755 UvrA DNA-binding domain Halar_0902 PF17760 UvrA interaction domain Halar_0902 PF00005 ABC transporter Halar_0904 PF01546 Peptidase family M20/M25/M40 Halar_0904 PF07687 Peptidase dimerisation domain Halar_0911 PF00773 RNB domain Halar_0911 PF08206 Ribonuclease B OB domain Halar_0916 PF01867 CRISPR associated protein Cas1 Halar_0917 PF01867 CRISPR associated protein Cas1 Halar_0917 PF01930 Domain of unknown function DUF83 Halar_0924 PF00338 Ribosomal protein S10p/S20e Halar_0925 PF03143 Elongation factor Tu C-terminal domain Halar_0925 PF03144 Elongation factor Tu domain 2 Halar_0925 PF00009 Elongation factor Tu GTP binding domain Halar_0926 PF01842 ACT domain Halar_0926 PF03447 Homoserine dehydrogenase, NAD binding domain Halar_0926 PF00742 Homoserine dehydrogenase Halar_0928 PF00679 Elongation factor G C-terminus Halar_0928 PF14492 Elongation Factor G, domain II Halar_0928 PF03764 Elongation factor G, domain IV Halar_0928 PF00009 Elongation factor Tu GTP binding domain Halar_0928 PF03144 Elongation factor Tu domain 2 Halar_0931 PF07995 Glucose / Sorbosone dehydrogenase Halar_0935 PF00177 Ribosomal protein S7p/S5e Halar_0938 PF05000 RNA polymerase Rpb1, domain 4 Halar_0938 PF04983 RNA polymerase Rpb1, domain 3 Halar_0938 PF00623 RNA polymerase Rpb1, domain 2 Halar_0938 PF04998 RNA polymerase Rpb1, domain 5 Halar_0938 PF04997 RNA polymerase Rpb1, domain 1 Halar_0939 PF04997 RNA polymerase Rpb1, domain 1 Halar_0939 PF00623 RNA polymerase Rpb1, domain 2 Halar_0939 PF04983 RNA polymerase Rpb1, domain 3 Halar_0939 PF05000 RNA polymerase Rpb1, domain 4 Halar_0939 PF04998 RNA polymerase Rpb1, domain 5 Halar_0940 PF00562 RNA polymerase Rpb2, domain 6 Halar_0940 PF10385 RNA polymerase beta subunit external 1 domain Halar_0940 PF04560 RNA polymerase Rpb2, domain 7 Halar_0940 PF04565 RNA polymerase Rpb2, domain 3 Halar_0940 PF04561 RNA polymerase Rpb2, domain 2 Halar_0940 PF04563 RNA polymerase beta subunit Halar_0941 PF10385 RNA polymerase beta subunit external 1 domain Halar_0941 PF00562 RNA polymerase Rpb2, domain 6 Halar_0941 PF04565 RNA polymerase Rpb2, domain 3 Halar_0941 PF04561 RNA polymerase Rpb2, domain 2 Halar_0941 PF04563 RNA polymerase beta subunit Halar_0941 PF04560 RNA polymerase Rpb2, domain 7 Halar_0943 PF00186 Dihydrofolate reductase Halar_0953 PF00391 PEP-utilising enzyme, mobile domain Halar_0953 PF02896 PEP-utilising enzyme, TIM barrel domain Halar_0953 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Halar_0954 PF00266 Aminotransferase class-V Halar_0955 PF00117 Glutamine amidotransferase class-I Halar_0956 PF01323 DSBA-like thioredoxin domain Halar_0958 PF00488 MutS domain V Halar_0958 PF05190 MutS family domain IV Halar_0958 PF05192 MutS domain III Halar_0958 PF01624 MutS domain I Halar_0958 PF05188 MutS domain II Halar_0960 PF01119 DNA mismatch repair protein, C-terminal domain Halar_0960 PF08676 MutL C terminal dimerisation domain Halar_0965 PF00266 Aminotransferase class-V Halar_0966 PF01592 NifU-like N terminal domain Halar_0971 PF06745 KaiC Halar_0973 PF02567 Phenazine biosynthesis-like protein Halar_0977 PF01959 3-dehydroquinate synthase II Halar_0984 PF00155 Aminotransferase class I and II Halar_0985 PF13409 Glutathione S-transferase, N-terminal domain Halar_0987 PF00692 dUTPase Halar_0992 PF01142 tRNA pseudouridine synthase D (TruD) Halar_1001 PF01588 Putative tRNA binding domain Halar_1001 PF09334 tRNA synthetases class I (M) Halar_1003 PF00271 Helicase conserved C-terminal domain Halar_1003 PF04851 Type III restriction enzyme, res subunit Halar_1003 PF17757 UvrB interaction domain Halar_1003 PF12344 Ultra-violet resistance protein B Halar_1003 PF02151 UvrB/uvrC motif Halar_1010 PF13378 Enolase C-terminal domain-like Halar_1010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Halar_1011 PF13378 Enolase C-terminal domain-like Halar_1011 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Halar_1017 PF01557 Fumarylacetoacetate (FAA) hydrolase family Halar_1018 PF01435 Peptidase family M48 Halar_1022 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_1022 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Halar_1028 PF01939 Endonuclease NucS Halar_1030 PF00378 Enoyl-CoA hydratase/isomerase Halar_1036 PF00171 Aldehyde dehydrogenase family Halar_1038 PF03853 YjeF-related protein N-terminus Halar_1038 PF01256 Carbohydrate kinase Halar_1039 PF01967 MoaC family Halar_1040 PF13167 GTP-binding GTPase N-terminal Halar_1040 PF01926 50S ribosome-binding GTPase Halar_1040 PF16360 GTP-binding GTPase Middle Region Halar_1051 PF00171 Aldehyde dehydrogenase family Halar_1054 PF00999 Sodium/hydrogen exchanger family Halar_1057 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_1057 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Halar_1060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Halar_1060 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_1060 PF00403 Heavy-metal-associated domain Halar_1062 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_1062 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Halar_1064 PF00403 Heavy-metal-associated domain Halar_1066 PF08543 Phosphomethylpyrimidine kinase Halar_1067 PF03070 TENA/THI-4/PQQC family Halar_1069 PF07685 CobB/CobQ-like glutamine amidotransferase domain Halar_1071 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_1072 PF00797 N-acetyltransferase Halar_1074 PF03601 Conserved hypothetical protein 698 Halar_1075 PF00106 short chain dehydrogenase Halar_1078 PF08402 TOBE domain Halar_1078 PF00005 ABC transporter Halar_1079 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1082 PF00732 GMC oxidoreductase Halar_1082 PF05199 GMC oxidoreductase Halar_1086 PF01557 Fumarylacetoacetate (FAA) hydrolase family Halar_1088 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Halar_1088 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Halar_1094 PF02163 Peptidase family M50 Halar_1094 PF00571 CBS domain Halar_1100 PF00403 Heavy-metal-associated domain Halar_1103 PF09339 IclR helix-turn-helix domain Halar_1103 PF01614 Bacterial transcriptional regulator Halar_1106 PF02625 XdhC and CoxI family Halar_1106 PF13478 XdhC Rossmann domain Halar_1107 PF00111 2Fe-2S iron-sulfur cluster binding domain Halar_1107 PF01799 [2Fe-2S] binding domain Halar_1108 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Halar_1108 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Halar_1110 PF00941 FAD binding domain in molybdopterin dehydrogenase Halar_1110 PF03450 CO dehydrogenase flavoprotein C-terminal domain Halar_1111 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Halar_1111 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Halar_1112 PF00860 Permease family Halar_1114 PF01979 Amidohydrolase family Halar_1117 PF01244 Membrane dipeptidase (Peptidase family M19) Halar_1118 PF01425 Amidase Halar_1119 PF00561 alpha/beta hydrolase fold Halar_1120 PF00326 Prolyl oligopeptidase family Halar_1120 PF07676 WD40-like Beta Propeller Repeat Halar_1122 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1123 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1123 PF12911 N-terminal TM domain of oligopeptide transport permease C Halar_1124 PF00005 ABC transporter Halar_1124 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_1126 PF01177 Asp/Glu/Hydantoin racemase Halar_1128 PF00107 Zinc-binding dehydrogenase Halar_1128 PF08240 Alcohol dehydrogenase GroES-like domain Halar_1131 PF00474 Sodium:solute symporter family Halar_1134 PF01544 CorA-like Mg2+ transporter protein Halar_1137 PF00296 Luciferase-like monooxygenase Halar_1142 PF00005 ABC transporter Halar_1142 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_1143 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_1143 PF00005 ABC transporter Halar_1144 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1144 PF12911 N-terminal TM domain of oligopeptide transport permease C Halar_1145 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1146 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Halar_1147 PF00326 Prolyl oligopeptidase family Halar_1155 PF00684 DnaJ central domain Halar_1155 PF01556 DnaJ C terminal domain Halar_1155 PF00226 DnaJ domain Halar_1156 PF07969 Amidohydrolase family Halar_1157 PF00210 Ferritin-like domain Halar_1160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Halar_1161 PF00403 Heavy-metal-associated domain Halar_1161 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_1161 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Halar_1169 PF13091 PLD-like domain Halar_1169 PF13396 Phospholipase_D-nuclease N-terminal Halar_1172 PF00294 pfkB family carbohydrate kinase Halar_1172 PF01467 Cytidylyltransferase-like Halar_1173 PF01040 UbiA prenyltransferase family Halar_1176 PF01638 HxlR-like helix-turn-helix Halar_1177 PF03143 Elongation factor Tu C-terminal domain Halar_1177 PF03144 Elongation factor Tu domain 2 Halar_1177 PF00009 Elongation factor Tu GTP binding domain Halar_1179 PF02289 Cyclohydrolase (MCH) Halar_1181 PF01425 Amidase Halar_1182 PF13426 PAS domain Halar_1182 PF07568 Histidine kinase Halar_1182 PF13581 Histidine kinase-like ATPase domain Halar_1184 PF00266 Aminotransferase class-V Halar_1186 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Halar_1186 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Halar_1186 PF01842 ACT domain Halar_1197 PF00392 Bacterial regulatory proteins, gntR family Halar_1197 PF00155 Aminotransferase class I and II Halar_1199 PF00764 Arginosuccinate synthase Halar_1200 PF14698 Argininosuccinate lyase C-terminal Halar_1200 PF00206 Lyase Halar_1202 PF08443 RimK-like ATP-grasp domain Halar_1203 PF01118 Semialdehyde dehydrogenase, NAD binding domain Halar_1203 PF02774 Semialdehyde dehydrogenase, dimerisation domain Halar_1204 PF00696 Amino acid kinase family Halar_1205 PF00202 Aminotransferase class-III Halar_1206 PF01546 Peptidase family M20/M25/M40 Halar_1207 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Halar_1207 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Halar_1208 PF03069 Acetamidase/Formamidase family Halar_1209 PF00682 HMGL-like Halar_1209 PF08502 LeuA allosteric (dimerisation) domain Halar_1210 PF02515 CoA-transferase family III Halar_1211 PF08402 TOBE domain Halar_1211 PF00005 ABC transporter Halar_1212 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1213 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1218 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Halar_1218 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Halar_1219 PF07859 alpha/beta hydrolase fold Halar_1220 PF13614 AAA domain Halar_1222 PF07687 Peptidase dimerisation domain Halar_1222 PF01546 Peptidase family M20/M25/M40 Halar_1224 PF12327 FtsZ family, C-terminal domain Halar_1224 PF00091 Tubulin/FtsZ family, GTPase domain Halar_1226 PF02515 CoA-transferase family III Halar_1227 PF17863 AAA lid domain Halar_1227 PF07726 ATPase family associated with various cellular activities (AAA) Halar_1233 PF00580 UvrD/REP helicase N-terminal domain Halar_1233 PF12705 PD-(D/E)XK nuclease superfamily Halar_1233 PF13361 UvrD-like helicase C-terminal domain Halar_1236 PF00144 Beta-lactamase Halar_1241 PF13247 4Fe-4S dicluster domain Halar_1242 PF01568 Molydopterin dinucleotide binding domain Halar_1242 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Halar_1242 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Halar_1242 PF12838 4Fe-4S dicluster domain Halar_1242 PF00384 Molybdopterin oxidoreductase Halar_1244 PF02613 Nitrate reductase delta subunit Halar_1250 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Halar_1250 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Halar_1252 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_1252 PF00512 His Kinase A (phospho-acceptor) domain Halar_1253 PF00571 CBS domain Halar_1253 PF00005 ABC transporter Halar_1258 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Halar_1258 PF00326 Prolyl oligopeptidase family Halar_1259 PF00067 Cytochrome P450 Halar_1262 PF03073 TspO/MBR family Halar_1264 PF00248 Aldo/keto reductase family Halar_1265 PF01425 Amidase Halar_1266 PF02686 Glu-tRNAGln amidotransferase C subunit Halar_1268 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Halar_1268 PF02770 Acyl-CoA dehydrogenase, middle domain Halar_1268 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Halar_1273 PF02515 CoA-transferase family III Halar_1274 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Halar_1274 PF00205 Thiamine pyrophosphate enzyme, central domain Halar_1274 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Halar_1275 PF01206 Sulfurtransferase TusA Halar_1275 PF00581 Rhodanese-like domain Halar_1277 PF04151 Bacterial pre-peptidase C-terminal domain Halar_1277 PF00082 Subtilase family Halar_1281 PF00005 ABC transporter Halar_1281 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_1282 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_1282 PF00005 ABC transporter Halar_1284 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1288 PF02254 TrkA-N domain Halar_1288 PF02080 TrkA-C domain Halar_1289 PF02386 Cation transport protein Halar_1293 PF07411 Domain of unknown function (DUF1508) Halar_1294 PF02843 Phosphoribosylglycinamide synthetase, C domain Halar_1294 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Halar_1294 PF02844 Phosphoribosylglycinamide synthetase, N domain Halar_1295 PF02979 Nitrile hydratase, alpha chain Halar_1299 PF00575 S1 RNA binding domain Halar_1303 PF00004 ATPase family associated with various cellular activities (AAA) Halar_1303 PF01434 Peptidase family M41 Halar_1303 PF06480 FtsH Extracellular Halar_1303 PF17862 AAA+ lid domain Halar_1306 PF13476 AAA domain Halar_1315 PF01063 Amino-transferase class IV Halar_1316 PF00117 Glutamine amidotransferase class-I Halar_1316 PF02885 Glycosyl transferase family, helical bundle domain Halar_1316 PF00591 Glycosyl transferase family, a/b domain Halar_1317 PF04715 Anthranilate synthase component I, N terminal region Halar_1317 PF00425 chorismate binding enzyme Halar_1319 PF08501 Shikimate dehydrogenase substrate binding domain Halar_1319 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Halar_1319 PF01488 Shikimate / quinate 5-dehydrogenase Halar_1322 PF00091 Tubulin/FtsZ family, GTPase domain Halar_1322 PF12327 FtsZ family, C-terminal domain Halar_1326 PF00483 Nucleotidyl transferase Halar_1328 PF01368 DHH family Halar_1328 PF02833 DHHA2 domain Halar_1329 PF03448 MgtE intracellular N domain Halar_1329 PF01769 Divalent cation transporter Halar_1329 PF00571 CBS domain Halar_1331 PF01321 Creatinase/Prolidase N-terminal domain Halar_1331 PF00557 Metallopeptidase family M24 Halar_1338 PF03129 Anticodon binding domain Halar_1338 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Halar_1338 PF04073 Aminoacyl-tRNA editing domain Halar_1340 PF00361 Proton-conducting membrane transporter Halar_1342 PF00361 Proton-conducting membrane transporter Halar_1342 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Halar_1343 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Halar_1347 PF00146 NADH dehydrogenase Halar_1348 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Halar_1348 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Halar_1349 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Halar_1350 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Halar_1353 PF00731 AIR carboxylase Halar_1354 PF02222 ATP-grasp domain Halar_1354 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Halar_1356 PF00582 Universal stress protein family Halar_1360 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Halar_1360 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Halar_1361 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Halar_1361 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Halar_1362 PF00488 MutS domain V Halar_1362 PF01713 Smr domain Halar_1367 PF04143 Sulphur transport Halar_1369 PF02770 Acyl-CoA dehydrogenase, middle domain Halar_1369 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Halar_1369 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Halar_1376 PF01596 O-methyltransferase Halar_1377 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Halar_1377 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Halar_1378 PF02633 Creatinine amidohydrolase Halar_1384 PF00378 Enoyl-CoA hydratase/isomerase Halar_1386 PF01613 Flavin reductase like domain Halar_1388 PF01595 Cyclin M transmembrane N-terminal domain Halar_1388 PF00571 CBS domain Halar_1392 PF18146 Damage-inducible protein CinA KH domain Halar_1392 PF00994 Probable molybdopterin binding domain Halar_1392 PF02464 Competence-damaged protein Halar_1393 PF01209 ubiE/COQ5 methyltransferase family Halar_1395 PF00437 Type II/IV secretion system protein Halar_1398 PF07043 Protein of unknown function (DUF1328) Halar_1400 PF07859 alpha/beta hydrolase fold Halar_1403 PF00781 Diacylglycerol kinase catalytic domain Halar_1416 PF01680 SOR/SNZ family Halar_1419 PF00694 Aconitase C-terminal domain Halar_1420 PF00330 Aconitase family (aconitate hydratase) Halar_1422 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Halar_1422 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Halar_1424 PF00205 Thiamine pyrophosphate enzyme, central domain Halar_1424 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Halar_1424 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Halar_1426 PF00920 Dehydratase family Halar_1429 PF01402 Ribbon-helix-helix protein, copG family Halar_1429 PF08753 NikR C terminal nickel binding domain Halar_1435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_1435 PF00005 ABC transporter Halar_1436 PF00005 ABC transporter Halar_1436 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_1437 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1437 PF12911 N-terminal TM domain of oligopeptide transport permease C Halar_1438 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1441 PF12706 Beta-lactamase superfamily domain Halar_1449 PF06827 Zinc finger found in FPG and IleRS Halar_1449 PF00133 tRNA synthetases class I (I, L, M and V) Halar_1449 PF08264 Anticodon-binding domain of tRNA Halar_1450 PF01266 FAD dependent oxidoreductase Halar_1450 PF04324 BFD-like [2Fe-2S] binding domain Halar_1451 PF01872 RibD C-terminal domain Halar_1451 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Halar_1452 PF00459 Inositol monophosphatase family Halar_1462 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Halar_1462 PF02770 Acyl-CoA dehydrogenase, middle domain Halar_1462 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Halar_1464 PF05552 Conserved TM helix Halar_1464 PF00924 Mechanosensitive ion channel Halar_1467 PF13439 Glycosyltransferase Family 4 Halar_1468 PF00534 Glycosyl transferases group 1 Halar_1468 PF13439 Glycosyltransferase Family 4 Halar_1472 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Halar_1472 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Halar_1472 PF02770 Acyl-CoA dehydrogenase, middle domain Halar_1477 PF01266 FAD dependent oxidoreductase Halar_1479 PF00072 Response regulator receiver domain Halar_1479 PF00486 Transcriptional regulatory protein, C terminal Halar_1480 PF00571 CBS domain Halar_1480 PF00478 IMP dehydrogenase / GMP reductase domain Halar_1483 PF13660 Domain of unknown function (DUF4147) Halar_1483 PF05161 MOFRL family Halar_1486 PF00586 AIR synthase related protein, N-terminal domain Halar_1486 PF02769 AIR synthase related protein, C-terminal domain Halar_1488 PF00571 CBS domain Halar_1494 PF01975 Survival protein SurE Halar_1499 PF01425 Amidase Halar_1501 PF00425 chorismate binding enzyme Halar_1502 PF16582 Middle domain of thiamine pyrophosphate Halar_1502 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Halar_1502 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Halar_1503 PF00378 Enoyl-CoA hydratase/isomerase Halar_1504 PF00293 NUDIX domain Halar_1504 PF13344 Haloacid dehalogenase-like hydrolase Halar_1505 PF01040 UbiA prenyltransferase family Halar_1507 PF00378 Enoyl-CoA hydratase/isomerase Halar_1508 PF03553 Na+/H+ antiporter family Halar_1509 PF01053 Cys/Met metabolism PLP-dependent enzyme Halar_1510 PF00561 alpha/beta hydrolase fold Halar_1512 PF01554 MatE Halar_1517 PF07883 Cupin domain Halar_1529 PF18764 Nitrous oxide reductase propeller repeat Halar_1529 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Halar_1529 PF18793 Nitrous oxide reductase propeller repeat 2 Halar_1532 PF00005 ABC transporter Halar_1533 PF12679 ABC-2 family transporter protein Halar_1537 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_1545 PF00265 Thymidine kinase Halar_1547 PF00288 GHMP kinases N terminal domain Halar_1547 PF10509 Galactokinase galactose-binding signature Halar_1547 PF08544 GHMP kinases C terminal Halar_1548 PF00318 Ribosomal protein S2 Halar_1549 PF03952 Enolase, N-terminal domain Halar_1549 PF00113 Enolase, C-terminal TIM barrel domain Halar_1552 PF00380 Ribosomal protein S9/S16 Halar_1556 PF00411 Ribosomal protein S11 Halar_1557 PF00163 Ribosomal protein S4/S9 N-terminal domain Halar_1557 PF01479 S4 domain Halar_1558 PF00416 Ribosomal protein S13/S18 Halar_1559 PF05853 beta-keto acid cleavage enzyme Halar_1561 PF04055 Radical SAM superfamily Halar_1561 PF06463 Molybdenum Cofactor Synthesis C Halar_1562 PF10609 NUBPL iron-transfer P-loop NTPase Halar_1562 PF01883 Iron-sulfur cluster assembly protein Halar_1568 PF00485 Phosphoribulokinase / Uridine kinase family Halar_1572 PF00155 Aminotransferase class I and II Halar_1574 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1575 PF00005 ABC transporter Halar_1581 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF Halar_1581 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Halar_1581 PF01189 16S rRNA methyltransferase RsmB/F Halar_1583 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Halar_1591 PF00535 Glycosyl transferase family 2 Halar_1593 PF01435 Peptidase family M48 Halar_1594 PF00571 CBS domain Halar_1594 PF03471 Transporter associated domain Halar_1594 PF01595 Cyclin M transmembrane N-terminal domain Halar_1600 PF00535 Glycosyl transferase family 2 Halar_1600 PF01501 Glycosyl transferase family 8 Halar_1601 PF00534 Glycosyl transferases group 1 Halar_1601 PF13439 Glycosyltransferase Family 4 Halar_1607 PF00884 Sulfatase Halar_1607 PF16347 Domain of unknown function (DUF4976) Halar_1611 PF00534 Glycosyl transferases group 1 Halar_1611 PF13439 Glycosyltransferase Family 4 Halar_1612 PF01380 SIS domain Halar_1613 PF00483 Nucleotidyl transferase Halar_1615 PF01370 NAD dependent epimerase/dehydratase family Halar_1616 PF16363 GDP-mannose 4,6 dehydratase Halar_1617 PF16363 GDP-mannose 4,6 dehydratase Halar_1622 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Halar_1622 PF03129 Anticodon binding domain Halar_1622 PF02824 TGS domain Halar_1622 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Halar_1624 PF02913 FAD linked oxidases, C-terminal domain Halar_1624 PF01565 FAD binding domain Halar_1624 PF13183 4Fe-4S dicluster domain Halar_1625 PF00266 Aminotransferase class-V Halar_1631 PF04055 Radical SAM superfamily Halar_1632 PF06508 Queuosine biosynthesis protein QueC Halar_1634 PF00296 Luciferase-like monooxygenase Halar_1636 PF00875 DNA photolyase Halar_1636 PF03441 FAD binding domain of DNA photolyase Halar_1640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Halar_1640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Halar_1642 PF02511 Thymidylate synthase complementing protein Halar_1643 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Halar_1646 PF00384 Molybdopterin oxidoreductase Halar_1646 PF12838 4Fe-4S dicluster domain Halar_1646 PF01568 Molydopterin dinucleotide binding domain Halar_1646 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Halar_1646 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Halar_1648 PF12804 MobA-like NTP transferase domain Halar_1650 PF01522 Polysaccharide deacetylase Halar_1653 PF01979 Amidohydrolase family Halar_1663 PF00115 Cytochrome C and Quinol oxidase polypeptide I Halar_1663 PF00510 Cytochrome c oxidase subunit III Halar_1667 PF06071 Protein of unknown function (DUF933) Halar_1667 PF01926 50S ribosome-binding GTPase Halar_1673 PF01425 Amidase Halar_1675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Halar_1678 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_1678 PF00005 ABC transporter Halar_1679 PF00005 ABC transporter Halar_1679 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_1691 PF00227 Proteasome subunit Halar_1693 PF04679 ATP dependent DNA ligase C terminal region Halar_1693 PF01068 ATP dependent DNA ligase domain Halar_1693 PF04675 DNA ligase N terminus Halar_1696 PF01370 NAD dependent epimerase/dehydratase family Halar_1704 PF06071 Protein of unknown function (DUF933) Halar_1704 PF01926 50S ribosome-binding GTPase Halar_1707 PF13520 Amino acid permease Halar_1713 PF02308 MgtC family Halar_1720 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Halar_1720 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Halar_1721 PF00464 Serine hydroxymethyltransferase Halar_1726 PF01979 Amidohydrolase family Halar_1727 PF00289 Biotin carboxylase, N-terminal domain Halar_1727 PF02785 Biotin carboxylase C-terminal domain Halar_1727 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Halar_1733 PF00202 Aminotransferase class-III Halar_1734 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Halar_1735 PF01321 Creatinase/Prolidase N-terminal domain Halar_1735 PF00557 Metallopeptidase family M24 Halar_1736 PF00202 Aminotransferase class-III Halar_1737 PF01546 Peptidase family M20/M25/M40 Halar_1737 PF07687 Peptidase dimerisation domain Halar_1741 PF00491 Arginase family Halar_1744 PF00005 ABC transporter Halar_1744 PF08402 TOBE domain Halar_1745 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1746 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1748 PF01266 FAD dependent oxidoreductase Halar_1749 PF02633 Creatinine amidohydrolase Halar_1750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Halar_1750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Halar_1751 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Halar_1751 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Halar_1752 PF00005 ABC transporter Halar_1753 PF12399 Branched-chain amino acid ATP-binding cassette transporter Halar_1753 PF00005 ABC transporter Halar_1755 PF02653 Branched-chain amino acid transport system / permease component Halar_1759 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1760 PF12857 TOBE-like domain Halar_1760 PF00005 ABC transporter Halar_1762 PF01494 FAD binding domain Halar_1769 PF01966 HD domain Halar_1771 PF00881 Nitroreductase family Halar_1771 PF01996 F420-0:Gamma-glutamyl ligase Halar_1772 PF00296 Luciferase-like monooxygenase Halar_1782 PF02649 Type I GTP cyclohydrolase folE2 Halar_1783 PF11495 Archaeal transcriptional regulator TrmB Halar_1783 PF01978 Sugar-specific transcriptional regulator TrmB Halar_1785 PF01521 Iron-sulphur cluster biosynthesis Halar_1787 PF00815 Histidinol dehydrogenase Halar_1788 PF00313 'Cold-shock' DNA-binding domain Halar_1793 PF01958 Domain of unknown function DUF108 Halar_1793 PF03447 Homoserine dehydrogenase, NAD binding domain Halar_1794 PF00005 ABC transporter Halar_1794 PF17912 MalK OB fold domain Halar_1794 PF03459 TOBE domain Halar_1795 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1796 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1798 PF00005 ABC transporter Halar_1799 PF12704 MacB-like periplasmic core domain Halar_1799 PF02687 FtsX-like permease family Halar_1805 PF08241 Methyltransferase domain Halar_1805 PF12697 Alpha/beta hydrolase family Halar_1807 PF02774 Semialdehyde dehydrogenase, dimerisation domain Halar_1807 PF01118 Semialdehyde dehydrogenase, NAD binding domain Halar_1808 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Halar_1808 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Halar_1810 PF00248 Aldo/keto reductase family Halar_1813 PF01008 Initiation factor 2 subunit family Halar_1815 PF01139 tRNA-splicing ligase RtcB Halar_1818 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_1818 PF14759 Reductase C-terminal Halar_1823 PF02142 MGS-like domain Halar_1823 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Halar_1823 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Halar_1825 PF01513 ATP-NAD kinase Halar_1826 PF06745 KaiC Halar_1829 PF01053 Cys/Met metabolism PLP-dependent enzyme Halar_1833 PF00398 Ribosomal RNA adenine dimethylase Halar_1834 PF00924 Mechanosensitive ion channel Halar_1839 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Halar_1842 PF00156 Phosphoribosyl transferase domain Halar_1846 PF00687 Ribosomal protein L1p/L10e family Halar_1849 PF00578 AhpC/TSA family Halar_1852 PF00348 Polyprenyl synthetase Halar_1853 PF17770 Ribonuclease J C-terminal domain Halar_1853 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Halar_1853 PF12706 Beta-lactamase superfamily domain Halar_1856 PF01037 Lrp/AsnC ligand binding domain Halar_1857 PF00459 Inositol monophosphatase family Halar_1860 PF00512 His Kinase A (phospho-acceptor) domain Halar_1860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_1862 PF00478 IMP dehydrogenase / GMP reductase domain Halar_1862 PF00571 CBS domain Halar_1864 PF01969 Protein of unknown function DUF111 Halar_1865 PF00004 ATPase family associated with various cellular activities (AAA) Halar_1865 PF01434 Peptidase family M41 Halar_1865 PF17862 AAA+ lid domain Halar_1866 PF00248 Aldo/keto reductase family Halar_1869 PF01895 PhoU domain Halar_1870 PF00005 ABC transporter Halar_1871 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1872 PF00528 Binding-protein-dependent transport system inner membrane component Halar_1873 PF12849 PBP superfamily domain Halar_1874 PF01895 PhoU domain Halar_1879 PF00924 Mechanosensitive ion channel Halar_1880 PF00762 Ferrochelatase Halar_1881 PF01593 Flavin containing amine oxidoreductase Halar_1881 PF02027 RolB/RolC glucosidase family Halar_1882 PF01208 Uroporphyrinogen decarboxylase (URO-D) Halar_1883 PF00582 Universal stress protein family Halar_1884 PF02237 Biotin protein ligase C terminal domain Halar_1884 PF08279 HTH domain Halar_1884 PF03099 Biotin/lipoate A/B protein ligase family Halar_1885 PF01039 Carboxyl transferase domain Halar_1893 PF01966 HD domain Halar_1896 PF00291 Pyridoxal-phosphate dependent enzyme Halar_1898 PF07726 ATPase family associated with various cellular activities (AAA) Halar_1898 PF17863 AAA lid domain Halar_1899 PF01882 Protein of unknown function DUF58 Halar_1900 PF01841 Transglutaminase-like superfamily Halar_1900 PF13559 Domain of unknown function (DUF4129) Halar_1900 PF11992 Domain of unknown function (DUF3488) Halar_1907 PF00583 Acetyltransferase (GNAT) family Halar_1908 PF00330 Aconitase family (aconitate hydratase) Halar_1915 PF01546 Peptidase family M20/M25/M40 Halar_1915 PF07687 Peptidase dimerisation domain Halar_1920 PF12706 Beta-lactamase superfamily domain Halar_1920 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Halar_1920 PF17770 Ribonuclease J C-terminal domain Halar_1926 PF00857 Isochorismatase family Halar_1930 PF01979 Amidohydrolase family Halar_1932 PF02910 Fumarate reductase flavoprotein C-term Halar_1932 PF00890 FAD binding domain Halar_1933 PF13085 2Fe-2S iron-sulfur cluster binding domain Halar_1942 PF18030 RimK PreATP-grasp domain Halar_1942 PF08443 RimK-like ATP-grasp domain Halar_1942 PF02080 TrkA-C domain Halar_1944 PF00730 HhH-GPD superfamily base excision DNA repair protein Halar_1945 PF12706 Beta-lactamase superfamily domain Halar_1948 PF02223 Thymidylate kinase Halar_1957 PF01820 D-ala D-ala ligase N-terminus Halar_1957 PF07478 D-ala D-ala ligase C-terminus Halar_1958 PF00296 Luciferase-like monooxygenase Halar_1960 PF00248 Aldo/keto reductase family Halar_1961 PF01546 Peptidase family M20/M25/M40 Halar_1961 PF07687 Peptidase dimerisation domain Halar_1965 PF01979 Amidohydrolase family Halar_1967 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Halar_1972 PF13378 Enolase C-terminal domain-like Halar_1972 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Halar_1993 PF01702 Queuine tRNA-ribosyltransferase Halar_2012 PF00005 ABC transporter Halar_2012 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_2013 PF00005 ABC transporter Halar_2013 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_2015 PF00528 Binding-protein-dependent transport system inner membrane component Halar_2016 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Halar_2019 PF00561 alpha/beta hydrolase fold Halar_2020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_2020 PF00005 ABC transporter Halar_2021 PF00005 ABC transporter Halar_2021 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_2023 PF00528 Binding-protein-dependent transport system inner membrane component Halar_2024 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Halar_2025 PF01321 Creatinase/Prolidase N-terminal domain Halar_2025 PF00557 Metallopeptidase family M24 Halar_2028 PF01470 Pyroglutamyl peptidase Halar_2040 PF01979 Amidohydrolase family Halar_2043 PF01351 Ribonuclease HII Halar_2044 PF00293 NUDIX domain Halar_2045 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Halar_2045 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Halar_2048 PF02355 Protein export membrane protein Halar_2048 PF07549 SecD/SecF GG Motif Halar_2052 PF06039 Malate:quinone oxidoreductase (Mqo) Halar_2053 PF00082 Subtilase family Halar_2054 PF01384 Phosphate transporter family Halar_2056 PF03631 Virulence factor BrkB Halar_2076 PF01916 Deoxyhypusine synthase Halar_2078 PF01784 NIF3 (NGG1p interacting factor 3) Halar_2079 PF00491 Arginase family Halar_2081 PF01571 Aminomethyltransferase folate-binding domain Halar_2081 PF08669 Glycine cleavage T-protein C-terminal barrel domain Halar_2082 PF01597 Glycine cleavage H-protein Halar_2083 PF02347 Glycine cleavage system P-protein Halar_2084 PF02347 Glycine cleavage system P-protein Halar_2088 PF01923 Cobalamin adenosyltransferase Halar_2090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_2090 PF00512 His Kinase A (phospho-acceptor) domain Halar_2090 PF07689 KaiB domain Halar_2091 PF01411 tRNA synthetases class II (A) Halar_2091 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Halar_2091 PF02272 DHHA1 domain Halar_2092 PF02770 Acyl-CoA dehydrogenase, middle domain Halar_2092 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Halar_2092 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Halar_2096 PF12697 Alpha/beta hydrolase family Halar_2098 PF00004 ATPase family associated with various cellular activities (AAA) Halar_2098 PF01434 Peptidase family M41 Halar_2098 PF06480 FtsH Extracellular Halar_2098 PF17862 AAA+ lid domain Halar_2101 PF00005 ABC transporter Halar_2104 PF00202 Aminotransferase class-III Halar_2115 PF01593 Flavin containing amine oxidoreductase Halar_2119 PF07282 Putative transposase DNA-binding domain Halar_2119 PF01385 Probable transposase Halar_2119 PF12323 Helix-turn-helix domain Halar_2123 PF01979 Amidohydrolase family Halar_2124 PF00317 Ribonucleotide reductase, all-alpha domain Halar_2124 PF03477 ATP cone domain Halar_2124 PF00317 Ribonucleotide reductase, all-alpha domain Halar_2124 PF02867 Ribonucleotide reductase, barrel domain Halar_2124 PF02867 Ribonucleotide reductase, barrel domain Halar_2124 PF03477 ATP cone domain Halar_2128 PF00117 Glutamine amidotransferase class-I Halar_2128 PF04715 Anthranilate synthase component I, N terminal region Halar_2128 PF00425 chorismate binding enzyme Halar_2129 PF00425 chorismate binding enzyme Halar_2129 PF04715 Anthranilate synthase component I, N terminal region Halar_2130 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Halar_2131 PF02885 Glycosyl transferase family, helical bundle domain Halar_2131 PF00591 Glycosyl transferase family, a/b domain Halar_2132 PF01152 Bacterial-like globin Halar_2136 PF13458 Periplasmic binding protein Halar_2138 PF02653 Branched-chain amino acid transport system / permease component Halar_2139 PF12399 Branched-chain amino acid ATP-binding cassette transporter Halar_2139 PF00005 ABC transporter Halar_2140 PF00005 ABC transporter Halar_2143 PF01565 FAD binding domain Halar_2143 PF02913 FAD linked oxidases, C-terminal domain Halar_2150 PF00248 Aldo/keto reductase family Halar_2154 PF01546 Peptidase family M20/M25/M40 Halar_2154 PF07687 Peptidase dimerisation domain Halar_2158 PF00171 Aldehyde dehydrogenase family Halar_2159 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Halar_2160 PF00528 Binding-protein-dependent transport system inner membrane component Halar_2162 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_2162 PF00005 ABC transporter Halar_2163 PF00005 ABC transporter Halar_2163 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_2164 PF00180 Isocitrate/isopropylmalate dehydrogenase Halar_2166 PF08267 Cobalamin-independent synthase, N-terminal domain Halar_2166 PF01717 Cobalamin-independent synthase, Catalytic domain Halar_2167 PF01008 Initiation factor 2 subunit family Halar_2168 PF00294 pfkB family carbohydrate kinase Halar_2170 PF00334 Nucleoside diphosphate kinase Halar_2174 PF17176 tRNA-binding domain Halar_2174 PF05127 Helicase Halar_2174 PF13718 GNAT acetyltransferase 2 Halar_2174 PF08351 Domain of unknown function (DUF1726) Halar_2175 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Halar_2175 PF12801 4Fe-4S binding domain Halar_2175 PF13746 4Fe-4S dicluster domain Halar_2178 PF01425 Amidase Halar_2183 PF00149 Calcineurin-like phosphoesterase Halar_2183 PF02872 5'-nucleotidase, C-terminal domain Halar_2189 PF00298 Ribosomal protein L11, RNA binding domain Halar_2189 PF03946 Ribosomal protein L11, N-terminal domain Halar_2190 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Halar_2191 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Halar_2192 PF05343 M42 glutamyl aminopeptidase Halar_2195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Halar_2195 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_2199 PF02522 Aminoglycoside 3-N-acetyltransferase Halar_2203 PF00483 Nucleotidyl transferase Halar_2204 PF01380 SIS domain Halar_2211 PF02397 Bacterial sugar transferase Halar_2212 PF01385 Probable transposase Halar_2212 PF12323 Helix-turn-helix domain Halar_2212 PF07282 Putative transposase DNA-binding domain Halar_2213 PF00483 Nucleotidyl transferase Halar_2221 PF01425 Amidase Halar_2224 PF12327 FtsZ family, C-terminal domain Halar_2224 PF00091 Tubulin/FtsZ family, GTPase domain Halar_2226 PF04055 Radical SAM superfamily Halar_2228 PF00924 Mechanosensitive ion channel Halar_2229 PF00155 Aminotransferase class I and II Halar_2231 PF04055 Radical SAM superfamily Halar_2232 PF02913 FAD linked oxidases, C-terminal domain Halar_2232 PF01565 FAD binding domain Halar_2233 PF01259 SAICAR synthetase Halar_2242 PF00248 Aldo/keto reductase family Halar_2248 PF02540 NAD synthase Halar_2248 PF00117 Glutamine amidotransferase class-I Halar_2248 PF00958 GMP synthase C terminal domain Halar_2249 PF06418 CTP synthase N-terminus Halar_2249 PF00117 Glutamine amidotransferase class-I Halar_2252 PF02597 ThiS family Halar_2255 PF07885 Ion channel Halar_2255 PF02254 TrkA-N domain Halar_2257 PF01048 Phosphorylase superfamily Halar_2260 PF01791 DeoC/LacD family aldolase Halar_2272 PF02073 Thermophilic metalloprotease (M29) Halar_2273 PF01979 Amidohydrolase family Halar_2274 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Halar_2274 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Halar_2277 PF13732 Domain of unknown function (DUF4162) Halar_2277 PF00005 ABC transporter Halar_2279 PF01541 GIY-YIG catalytic domain Halar_2279 PF08459 UvrC Helix-hairpin-helix N-terminal Halar_2279 PF02151 UvrB/uvrC motif Halar_2279 PF12826 Helix-hairpin-helix motif Halar_2281 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Halar_2281 PF00056 lactate/malate dehydrogenase, NAD binding domain Halar_2287 PF00326 Prolyl oligopeptidase family Halar_2289 PF02586 SOS response associated peptidase (SRAP) Halar_2290 PF00141 Peroxidase Halar_2292 PF00085 Thioredoxin Halar_2293 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_2293 PF00989 PAS fold Halar_2293 PF00512 His Kinase A (phospho-acceptor) domain Halar_2298 PF00565 Staphylococcal nuclease homologue Halar_2298 PF05901 Excalibur calcium-binding domain Halar_2301 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_2301 PF00005 ABC transporter Halar_2303 PF00528 Binding-protein-dependent transport system inner membrane component Halar_2304 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Halar_2308 PF13380 CoA binding domain Halar_2309 PF00291 Pyridoxal-phosphate dependent enzyme Halar_2311 PF01546 Peptidase family M20/M25/M40 Halar_2311 PF07687 Peptidase dimerisation domain Halar_2315 PF01557 Fumarylacetoacetate (FAA) hydrolase family Halar_2316 PF00557 Metallopeptidase family M24 Halar_2316 PF01321 Creatinase/Prolidase N-terminal domain Halar_2318 PF00557 Metallopeptidase family M24 Halar_2318 PF05195 Aminopeptidase P, N-terminal domain Halar_2319 PF13416 Bacterial extracellular solute-binding protein Halar_2320 PF08402 TOBE domain Halar_2320 PF00005 ABC transporter Halar_2322 PF00528 Binding-protein-dependent transport system inner membrane component Halar_2323 PF13458 Periplasmic binding protein Halar_2324 PF02653 Branched-chain amino acid transport system / permease component Halar_2326 PF00005 ABC transporter Halar_2326 PF12399 Branched-chain amino acid ATP-binding cassette transporter Halar_2327 PF00005 ABC transporter Halar_2331 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Halar_2331 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Halar_2331 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Halar_2331 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Halar_2336 PF01134 Glucose inhibited division protein A Halar_2336 PF13932 GidA associated domain Halar_2337 PF07687 Peptidase dimerisation domain Halar_2337 PF01546 Peptidase family M20/M25/M40 Halar_2339 PF00293 NUDIX domain Halar_2341 PF00483 Nucleotidyl transferase Halar_2342 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_2344 PF00226 DnaJ domain Halar_2344 PF00684 DnaJ central domain Halar_2344 PF01556 DnaJ C terminal domain Halar_2350 PF02416 mttA/Hcf106 family Halar_2351 PF00437 Type II/IV secretion system protein Halar_2358 PF01425 Amidase Halar_2359 PF00294 pfkB family carbohydrate kinase Halar_2362 PF07995 Glucose / Sorbosone dehydrogenase Halar_2371 PF00171 Aldehyde dehydrogenase family Halar_2375 PF00501 AMP-binding enzyme Halar_2375 PF14535 AMP-binding enzyme C-terminal domain Halar_2377 PF01884 PcrB family Halar_2382 PF01467 Cytidylyltransferase-like Halar_2384 PF00672 HAMP domain Halar_2384 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_2384 PF00512 His Kinase A (phospho-acceptor) domain Halar_2384 PF00989 PAS fold Halar_2385 PF00664 ABC transporter transmembrane region Halar_2385 PF00005 ABC transporter Halar_2393 PF04127 DNA / pantothenate metabolism flavoprotein Halar_2393 PF02441 Flavoprotein Halar_2395 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Halar_2398 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Halar_2400 PF00361 Proton-conducting membrane transporter Halar_2400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Halar_2400 PF13244 Domain of unknown function (DUF4040) Halar_2401 PF00156 Phosphoribosyl transferase domain Halar_2409 PF00266 Aminotransferase class-V Halar_2421 PF00005 ABC transporter Halar_2428 PF13520 Amino acid permease Halar_2433 PF00580 UvrD/REP helicase N-terminal domain Halar_2433 PF12705 PD-(D/E)XK nuclease superfamily Halar_2433 PF13361 UvrD-like helicase C-terminal domain Halar_2435 PF00403 Heavy-metal-associated domain Halar_2449 PF00394 Multicopper oxidase Halar_2449 PF07731 Multicopper oxidase Halar_2449 PF07732 Multicopper oxidase Halar_2451 PF00893 Small Multidrug Resistance protein Halar_2452 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Halar_2452 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Halar_2455 PF00958 GMP synthase C terminal domain Halar_2455 PF02540 NAD synthase Halar_2455 PF00117 Glutamine amidotransferase class-I Halar_2459 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Halar_2461 PF00333 Ribosomal protein S5, N-terminal domain Halar_2461 PF03719 Ribosomal protein S5, C-terminal domain Halar_2464 PF02151 UvrB/uvrC motif Halar_2464 PF01541 GIY-YIG catalytic domain Halar_2464 PF08459 UvrC Helix-hairpin-helix N-terminal Halar_2465 PF00347 Ribosomal protein L6 Halar_2466 PF00410 Ribosomal protein S8 Halar_2468 PF00281 Ribosomal protein L5 Halar_2468 PF00673 ribosomal L5P family C-terminus Halar_2471 PF00238 Ribosomal protein L14p/L23e Halar_2472 PF00366 Ribosomal protein S17 Halar_2474 PF00831 Ribosomal L29 protein Halar_2475 PF07650 KH domain Halar_2475 PF00189 Ribosomal protein S3, C-terminal domain Halar_2477 PF00203 Ribosomal protein S19 Halar_2478 PF00181 Ribosomal Proteins L2, RNA binding domain Halar_2478 PF03947 Ribosomal Proteins L2, C-terminal domain Halar_2480 PF00573 Ribosomal protein L4/L1 family Halar_2481 PF00297 Ribosomal protein L3 Halar_2487 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Halar_2488 PF00296 Luciferase-like monooxygenase Halar_2492 PF00300 Histidine phosphatase superfamily (branch 1) Halar_2492 PF13456 Reverse transcriptase-like Halar_2493 PF00171 Aldehyde dehydrogenase family Halar_2495 PF04107 Glutamate-cysteine ligase family 2(GCS2) Halar_2499 PF02653 Branched-chain amino acid transport system / permease component Halar_2501 PF12399 Branched-chain amino acid ATP-binding cassette transporter Halar_2501 PF00005 ABC transporter Halar_2502 PF00005 ABC transporter Halar_2504 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) Halar_2506 PF00924 Mechanosensitive ion channel Halar_2508 PF04307 LexA-binding, inner membrane-associated putative hydrolase Halar_2515 PF00709 Adenylosuccinate synthetase Halar_2518 PF01370 NAD dependent epimerase/dehydratase family Halar_2526 PF00977 Histidine biosynthesis protein Halar_2537 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Halar_2542 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Halar_2542 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Halar_2542 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Halar_2543 PF02350 UDP-N-acetylglucosamine 2-epimerase Halar_2545 PF03102 NeuB family Halar_2545 PF08666 SAF domain Halar_2551 PF02348 Cytidylyltransferase Halar_2556 PF00005 ABC transporter Halar_2556 PF00664 ABC transporter transmembrane region Halar_2559 PF00561 alpha/beta hydrolase fold Halar_2560 PF01494 FAD binding domain Halar_2561 PF00501 AMP-binding enzyme Halar_2561 PF13193 AMP-binding enzyme C-terminal domain Halar_2569 PF00582 Universal stress protein family Halar_2571 PF00753 Metallo-beta-lactamase superfamily Halar_2571 PF00581 Rhodanese-like domain Halar_2577 PF01255 Putative undecaprenyl diphosphate synthase Halar_2578 PF01255 Putative undecaprenyl diphosphate synthase Halar_2581 PF01807 CHC2 zinc finger Halar_2581 PF08275 DNA primase catalytic core, N-terminal domain Halar_2581 PF13662 Toprim domain Halar_2583 PF00474 Sodium:solute symporter family Halar_2591 PF02769 AIR synthase related protein, C-terminal domain Halar_2591 PF00586 AIR synthase related protein, N-terminal domain Halar_2592 PF00266 Aminotransferase class-V Halar_2594 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_2600 PF02423 Ornithine cyclodeaminase/mu-crystallin family Halar_2601 PF07690 Major Facilitator Superfamily Halar_2603 PF01209 ubiE/COQ5 methyltransferase family Halar_2608 PF10415 Fumarase C C-terminus Halar_2608 PF00206 Lyase Halar_2610 PF02637 GatB domain Halar_2610 PF02934 GatB/GatE catalytic domain Halar_2612 PF00005 ABC transporter Halar_2612 PF02687 FtsX-like permease family Halar_2612 PF12704 MacB-like periplasmic core domain Halar_2613 PF00005 ABC transporter Halar_2613 PF02687 FtsX-like permease family Halar_2613 PF12704 MacB-like periplasmic core domain Halar_2616 PF00171 Aldehyde dehydrogenase family Halar_2616 PF01575 MaoC like domain Halar_2617 PF00588 SpoU rRNA Methylase family Halar_2625 PF02913 FAD linked oxidases, C-terminal domain Halar_2625 PF13183 4Fe-4S dicluster domain Halar_2625 PF01565 FAD binding domain Halar_2626 PF00155 Aminotransferase class I and II Halar_2627 PF09369 Domain of unknown function (DUF1998) Halar_2627 PF00271 Helicase conserved C-terminal domain Halar_2627 PF00270 DEAD/DEAH box helicase Halar_2628 PF01025 GrpE Halar_2629 PF00012 Hsp70 protein Halar_2630 PF01556 DnaJ C terminal domain Halar_2630 PF00226 DnaJ domain Halar_2630 PF00684 DnaJ central domain Halar_2632 PF00501 AMP-binding enzyme Halar_2632 PF13193 AMP-binding enzyme C-terminal domain Halar_2632 PF16177 Acetyl-coenzyme A synthetase N-terminus Halar_2634 PF00521 DNA gyrase/topoisomerase IV, subunit A Halar_2634 PF03989 DNA gyrase C-terminal domain, beta-propeller Halar_2635 PF00204 DNA gyrase B Halar_2635 PF01751 Toprim domain Halar_2635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_2635 PF00986 DNA gyrase B subunit, carboxyl terminus Halar_2639 PF01048 Phosphorylase superfamily Halar_2641 PF00491 Arginase family Halar_2643 PF01546 Peptidase family M20/M25/M40 Halar_2645 PF02899 Phage integrase, N-terminal SAM-like domain Halar_2645 PF00589 Phage integrase family Halar_2646 PF13291 ACT domain Halar_2646 PF00291 Pyridoxal-phosphate dependent enzyme Halar_2647 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_2647 PF00005 ABC transporter Halar_2648 PF00005 ABC transporter Halar_2648 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_2650 PF00528 Binding-protein-dependent transport system inner membrane component Halar_2651 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Halar_2653 PF00294 pfkB family carbohydrate kinase Halar_2656 PF03437 BtpA family Halar_2669 PF00326 Prolyl oligopeptidase family Halar_2675 PF03450 CO dehydrogenase flavoprotein C-terminal domain Halar_2675 PF00941 FAD binding domain in molybdopterin dehydrogenase Halar_2680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_2680 PF00672 HAMP domain Halar_2680 PF16527 Two-component sensor protein CpxA, periplasmic domain Halar_2680 PF00512 His Kinase A (phospho-acceptor) domain Halar_2683 PF01434 Peptidase family M41 Halar_2683 PF00004 ATPase family associated with various cellular activities (AAA) Halar_2683 PF17862 AAA+ lid domain Halar_2684 PF08439 Oligopeptidase F Halar_2684 PF01432 Peptidase family M3 Halar_2687 PF01416 tRNA pseudouridine synthase Halar_2689 PF03129 Anticodon binding domain Halar_2689 PF13393 Histidyl-tRNA synthetase Halar_2693 PF03706 Lysylphosphatidylglycerol synthase TM region Halar_2693 PF09924 Uncharacterised conserved protein (DUF2156) Halar_2694 PF00586 AIR synthase related protein, N-terminal domain Halar_2694 PF02769 AIR synthase related protein, C-terminal domain Halar_2697 PF02391 MoaE protein Halar_2698 PF00696 Amino acid kinase family Halar_2699 PF01921 tRNA synthetases class I (K) Halar_2701 PF03551 Transcriptional regulator PadR-like family Halar_2710 PF02540 NAD synthase Halar_2714 PF07883 Cupin domain Halar_2720 PF01725 Ham1 family Halar_2722 PF00814 Glycoprotease family Halar_2727 PF01138 3' exoribonuclease family, domain 1 Halar_2727 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Halar_2727 PF00013 KH domain Halar_2727 PF03725 3' exoribonuclease family, domain 2 Halar_2727 PF00575 S1 RNA binding domain Halar_2729 PF03143 Elongation factor Tu C-terminal domain Halar_2729 PF00009 Elongation factor Tu GTP binding domain Halar_2729 PF03144 Elongation factor Tu domain 2 Halar_2732 PF03099 Biotin/lipoate A/B protein ligase family Halar_2732 PF12706 Beta-lactamase superfamily domain Halar_2734 PF00004 ATPase family associated with various cellular activities (AAA) Halar_2739 PF00753 Metallo-beta-lactamase superfamily Halar_2741 PF00501 AMP-binding enzyme Halar_2742 PF02254 TrkA-N domain Halar_2742 PF00999 Sodium/hydrogen exchanger family Halar_2744 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Halar_2744 PF02403 Seryl-tRNA synthetase N-terminal domain Halar_2747 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Halar_2747 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Halar_2749 PF01926 50S ribosome-binding GTPase Halar_2749 PF09269 Domain of unknown function (DUF1967) Halar_2749 PF01018 GTP1/OBG Halar_2750 PF04402 Protein of unknown function (DUF541) Halar_2752 PF02080 TrkA-C domain Halar_2753 PF00999 Sodium/hydrogen exchanger family Halar_2758 PF01624 MutS domain I Halar_2758 PF05188 MutS domain II Halar_2758 PF00488 MutS domain V Halar_2758 PF05192 MutS domain III Halar_2758 PF05190 MutS family domain IV Halar_2763 PF01938 TRAM domain Halar_2763 PF00919 Uncharacterized protein family UPF0004 Halar_2763 PF04055 Radical SAM superfamily Halar_2766 PF16916 Dimerisation domain of Zinc Transporter Halar_2766 PF01545 Cation efflux family Halar_2767 PF01230 HIT domain Halar_2771 PF08364 Bacterial translation initiation factor IF-2 associated region Halar_2771 PF00009 Elongation factor Tu GTP binding domain Halar_2771 PF04760 Translation initiation factor IF-2, N-terminal region Halar_2771 PF11987 Translation-initiation factor 2 Halar_2775 PF00342 Phosphoglucose isomerase Halar_2782 PF00296 Luciferase-like monooxygenase Halar_2783 PF03358 NADPH-dependent FMN reductase Halar_2789 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Halar_2789 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Halar_2790 PF01641 SelR domain Halar_2793 PF00355 Rieske [2Fe-2S] domain Halar_2794 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Halar_2794 PF00117 Glutamine amidotransferase class-I Halar_2796 PF00293 NUDIX domain Halar_2797 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_2799 PF08240 Alcohol dehydrogenase GroES-like domain Halar_2799 PF00107 Zinc-binding dehydrogenase Halar_2800 PF00994 Probable molybdopterin binding domain Halar_2810 PF01509 TruB family pseudouridylate synthase (N terminal domain) Halar_2810 PF09157 Pseudouridine synthase II TruB, C-terminal Halar_2810 PF16198 tRNA pseudouridylate synthase B C-terminal domain Halar_2812 PF00398 Ribosomal RNA adenine dimethylase Halar_2813 PF00994 Probable molybdopterin binding domain Halar_2813 PF03453 MoeA N-terminal region (domain I and II) Halar_2813 PF03454 MoeA C-terminal region (domain IV) Halar_2814 PF03453 MoeA N-terminal region (domain I and II) Halar_2814 PF03454 MoeA C-terminal region (domain IV) Halar_2814 PF00994 Probable molybdopterin binding domain Halar_2818 PF01329 Pterin 4 alpha carbinolamine dehydratase Halar_2819 PF01488 Shikimate / quinate 5-dehydrogenase Halar_2819 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Halar_2819 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Halar_2824 PF00156 Phosphoribosyl transferase domain Halar_2825 PF01546 Peptidase family M20/M25/M40 Halar_2825 PF07687 Peptidase dimerisation domain Halar_2828 PF01625 Peptide methionine sulfoxide reductase Halar_2830 PF08544 GHMP kinases C terminal Halar_2830 PF00288 GHMP kinases N terminal domain Halar_2832 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Halar_2835 PF07969 Amidohydrolase family Halar_2838 PF01370 NAD dependent epimerase/dehydratase family Halar_2839 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Halar_2839 PF03484 tRNA synthetase B5 domain Halar_2840 PF01409 tRNA synthetases class II core domain (F) Halar_2845 PF13419 Haloacid dehalogenase-like hydrolase Halar_2846 PF00271 Helicase conserved C-terminal domain Halar_2846 PF08148 DSHCT (NUC185) domain Halar_2846 PF00270 DEAD/DEAH box helicase Halar_2847 PF01554 MatE Halar_2848 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Halar_2848 PF04055 Radical SAM superfamily Halar_2849 PF00676 Dehydrogenase E1 component Halar_2850 PF02780 Transketolase, C-terminal domain Halar_2850 PF02779 Transketolase, pyrimidine binding domain Halar_2851 PF00364 Biotin-requiring enzyme Halar_2851 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Halar_2851 PF02817 e3 binding domain Halar_2852 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Halar_2852 PF07992 Pyridine nucleotide-disulphide oxidoreductase Halar_2853 PF07687 Peptidase dimerisation domain Halar_2853 PF01546 Peptidase family M20/M25/M40 Halar_2854 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Halar_2854 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Halar_2854 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Halar_2854 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Halar_2856 PF01502 Phosphoribosyl-AMP cyclohydrolase Halar_2858 PF00171 Aldehyde dehydrogenase family Halar_2859 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Halar_2859 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Halar_2859 PF00205 Thiamine pyrophosphate enzyme, central domain Halar_2865 PF09186 Domain of unknown function (DUF1949) Halar_2865 PF01205 Uncharacterized protein family UPF0029 Halar_2868 PF00475 Imidazoleglycerol-phosphate dehydratase Halar_2872 PF00180 Isocitrate/isopropylmalate dehydrogenase Halar_2873 PF01112 Asparaginase Halar_2877 PF01479 S4 domain Halar_2877 PF00579 tRNA synthetases class I (W and Y) Halar_2882 PF00013 KH domain Halar_2882 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Halar_2882 PF01138 3' exoribonuclease family, domain 1 Halar_2882 PF03725 3' exoribonuclease family, domain 2 Halar_2882 PF00575 S1 RNA binding domain Halar_2883 PF01813 ATP synthase subunit D Halar_2886 PF00750 tRNA synthetases class I (R) Halar_2886 PF05746 DALR anticodon binding domain Halar_2886 PF03485 Arginyl tRNA synthetase N terminal domain Halar_2888 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Halar_2888 PF00925 GTP cyclohydrolase II Halar_2889 PF01063 Amino-transferase class IV Halar_2890 PF13458 Periplasmic binding protein Halar_2891 PF02653 Branched-chain amino acid transport system / permease component Halar_2892 PF02653 Branched-chain amino acid transport system / permease component Halar_2892 PF11862 Domain of unknown function (DUF3382) Halar_2893 PF12399 Branched-chain amino acid ATP-binding cassette transporter Halar_2893 PF00005 ABC transporter Halar_2894 PF00005 ABC transporter Halar_2896 PF00107 Zinc-binding dehydrogenase Halar_2896 PF16884 N-terminal domain of oxidoreductase Halar_2897 PF00899 ThiF family Halar_2899 PF14437 MafB19-like deaminase Halar_2899 PF01171 PP-loop family Halar_2900 PF01209 ubiE/COQ5 methyltransferase family Halar_2902 PF01209 ubiE/COQ5 methyltransferase family Halar_2904 PF01261 Xylose isomerase-like TIM barrel Halar_2905 PF03099 Biotin/lipoate A/B protein ligase family Halar_2905 PF10437 Bacterial lipoate protein ligase C-terminus Halar_2916 PF00533 BRCA1 C Terminus (BRCT) domain Halar_2916 PF01653 NAD-dependent DNA ligase adenylation domain Halar_2916 PF03120 NAD-dependent DNA ligase OB-fold domain Halar_2916 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Halar_2916 PF12826 Helix-hairpin-helix motif Halar_2918 PF01554 MatE Halar_2924 PF01180 Dihydroorotate dehydrogenase Halar_2927 PF00067 Cytochrome P450 Halar_2932 PF12344 Ultra-violet resistance protein B Halar_2932 PF02151 UvrB/uvrC motif Halar_2932 PF04851 Type III restriction enzyme, res subunit Halar_2932 PF00271 Helicase conserved C-terminal domain Halar_2932 PF17757 UvrB interaction domain Halar_2935 PF00581 Rhodanese-like domain Halar_2945 PF01926 50S ribosome-binding GTPase Halar_2945 PF07650 KH domain Halar_2949 PF00326 Prolyl oligopeptidase family Halar_2949 PF07676 WD40-like Beta Propeller Repeat Halar_2958 PF00977 Histidine biosynthesis protein Halar_2959 PF00133 tRNA synthetases class I (I, L, M and V) Halar_2959 PF08264 Anticodon-binding domain of tRNA Halar_2962 PF01979 Amidohydrolase family Halar_2968 PF07411 Domain of unknown function (DUF1508) Halar_2969 PF02666 Phosphatidylserine decarboxylase Halar_2970 PF09115 DNA polymerase III, delta subunit, C terminal Halar_2972 PF12706 Beta-lactamase superfamily domain Halar_2981 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Halar_2981 PF03129 Anticodon binding domain Halar_2989 PF16347 Domain of unknown function (DUF4976) Halar_2989 PF00884 Sulfatase Halar_2991 PF00557 Metallopeptidase family M24 Halar_2995 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Halar_2995 PF05221 S-adenosyl-L-homocysteine hydrolase Halar_3000 PF12169 DNA polymerase III subunits gamma and tau domain III Halar_3004 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Halar_3004 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Halar_3004 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Halar_3004 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Halar_3005 PF03358 NADPH-dependent FMN reductase Halar_3006 PF01541 GIY-YIG catalytic domain Halar_3009 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Halar_3010 PF01810 LysE type translocator Halar_3018 PF00348 Polyprenyl synthetase Halar_3019 PF12697 Alpha/beta hydrolase family Halar_3019 PF08241 Methyltransferase domain Halar_3023 PF01012 Electron transfer flavoprotein domain Halar_3024 PF00766 Electron transfer flavoprotein FAD-binding domain Halar_3024 PF01012 Electron transfer flavoprotein domain Halar_3026 PF18670 V-type ATPase subunit I, N-terminal domain Halar_3026 PF01496 V-type ATPase 116kDa subunit family Halar_3031 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Halar_3031 PF02874 ATP synthase alpha/beta family, beta-barrel domain Halar_3031 PF16886 ATPsynthase alpha/beta subunit N-term extension Halar_3032 PF02874 ATP synthase alpha/beta family, beta-barrel domain Halar_3032 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Halar_3033 PF03853 YjeF-related protein N-terminus Halar_3034 PF00118 TCP-1/cpn60 chaperonin family Halar_3035 PF02633 Creatinine amidohydrolase Halar_3037 PF01121 Dephospho-CoA kinase Halar_3044 PF02978 Signal peptide binding domain Halar_3044 PF02881 SRP54-type protein, helical bundle domain Halar_3044 PF00448 SRP54-type protein, GTPase domain Halar_3047 PF02978 Signal peptide binding domain Halar_3047 PF02881 SRP54-type protein, helical bundle domain Halar_3047 PF00448 SRP54-type protein, GTPase domain Halar_3056 PF00291 Pyridoxal-phosphate dependent enzyme Halar_3058 PF12327 FtsZ family, C-terminal domain Halar_3058 PF00091 Tubulin/FtsZ family, GTPase domain Halar_3059 PF12327 FtsZ family, C-terminal domain Halar_3059 PF00091 Tubulin/FtsZ family, GTPase domain Halar_3063 PF00403 Heavy-metal-associated domain Halar_3064 PF01321 Creatinase/Prolidase N-terminal domain Halar_3064 PF00557 Metallopeptidase family M24 Halar_3065 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Halar_3070 PF04399 Glutaredoxin 2, C terminal domain Halar_3070 PF13417 Glutathione S-transferase, N-terminal domain Halar_3072 PF00860 Permease family Halar_3073 PF00156 Phosphoribosyl transferase domain Halar_3074 PF00156 Phosphoribosyl transferase domain Halar_3079 PF00958 GMP synthase C terminal domain Halar_3079 PF00117 Glutamine amidotransferase class-I Halar_3079 PF02540 NAD synthase Halar_3087 PF00999 Sodium/hydrogen exchanger family Halar_3087 PF02254 TrkA-N domain Halar_3088 PF01370 NAD dependent epimerase/dehydratase family Halar_3091 PF00282 Pyridoxal-dependent decarboxylase conserved domain Halar_3098 PF00557 Metallopeptidase family M24 Halar_3098 PF02810 SEC-C motif Halar_3102 PF13520 Amino acid permease Halar_3110 PF01758 Sodium Bile acid symporter family Halar_3112 PF02887 Pyruvate kinase, alpha/beta domain Halar_3112 PF00224 Pyruvate kinase, barrel domain Halar_3112 PF00391 PEP-utilising enzyme, mobile domain Halar_3113 PF00480 ROK family Halar_3114 PF00107 Zinc-binding dehydrogenase Halar_3114 PF08240 Alcohol dehydrogenase GroES-like domain Halar_3116 PF00171 Aldehyde dehydrogenase family Halar_3117 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Halar_3117 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Halar_3118 PF00005 ABC transporter Halar_3118 PF08402 TOBE domain Halar_3119 PF13416 Bacterial extracellular solute-binding protein Halar_3120 PF00528 Binding-protein-dependent transport system inner membrane component Halar_3121 PF00528 Binding-protein-dependent transport system inner membrane component Halar_3122 PF01037 Lrp/AsnC ligand binding domain Halar_3124 PF01266 FAD dependent oxidoreductase Halar_3125 PF00202 Aminotransferase class-III Halar_3126 PF01266 FAD dependent oxidoreductase Halar_3133 PF00437 Type II/IV secretion system protein Halar_3145 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Halar_3146 PF00155 Aminotransferase class I and II Halar_3147 PF01244 Membrane dipeptidase (Peptidase family M19) Halar_3150 PF00117 Glutamine amidotransferase class-I Halar_3159 PF01842 ACT domain Halar_3159 PF00800 Prephenate dehydratase Halar_3159 PF01817 Chorismate mutase type II Halar_3160 PF00512 His Kinase A (phospho-acceptor) domain Halar_3160 PF00672 HAMP domain Halar_3160 PF16527 Two-component sensor protein CpxA, periplasmic domain Halar_3160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_3165 PF00133 tRNA synthetases class I (I, L, M and V) Halar_3165 PF13603 Leucyl-tRNA synthetase, Domain 2 Halar_3165 PF09334 tRNA synthetases class I (M) Halar_3165 PF08264 Anticodon-binding domain of tRNA Halar_3166 PF02080 TrkA-C domain Halar_3166 PF03600 Citrate transporter Halar_3167 PF02423 Ornithine cyclodeaminase/mu-crystallin family Halar_3168 PF01791 DeoC/LacD family aldolase Halar_3169 PF00290 Tryptophan synthase alpha chain Halar_3170 PF00291 Pyridoxal-phosphate dependent enzyme Halar_3171 PF00218 Indole-3-glycerol phosphate synthase Halar_3174 PF02540 NAD synthase Halar_3175 PF05190 MutS family domain IV Halar_3175 PF00488 MutS domain V Halar_3175 PF05192 MutS domain III Halar_3175 PF05188 MutS domain II Halar_3175 PF01624 MutS domain I Halar_3179 PF07690 Major Facilitator Superfamily Halar_3184 PF00120 Glutamine synthetase, catalytic domain Halar_3184 PF03951 Glutamine synthetase, beta-Grasp domain Halar_3190 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase Halar_3192 PF00291 Pyridoxal-phosphate dependent enzyme Halar_3192 PF13291 ACT domain Halar_3193 PF01042 Endoribonuclease L-PSP Halar_3201 PF01048 Phosphorylase superfamily Halar_3202 PF02616 Segregation and condensation protein ScpA Halar_3203 PF02463 RecF/RecN/SMC N terminal domain Halar_3203 PF06470 SMC proteins Flexible Hinge Domain Halar_3209 PF00005 ABC transporter Halar_3209 PF08402 TOBE domain Halar_3210 PF00528 Binding-protein-dependent transport system inner membrane component Halar_3213 PF02934 GatB/GatE catalytic domain Halar_3213 PF02637 GatB domain Halar_3215 PF01053 Cys/Met metabolism PLP-dependent enzyme Halar_3221 PF01751 Toprim domain Halar_3221 PF08272 Topoisomerase I zinc-ribbon-like Halar_3221 PF01131 DNA topoisomerase Halar_3221 PF01396 Topoisomerase DNA binding C4 zinc finger Halar_3225 PF12950 TaqI-like C-terminal specificity domain Halar_3225 PF02384 N-6 DNA Methylase Halar_3226 PF01884 PcrB family Halar_3227 PF00152 tRNA synthetases class II (D, K and N) Halar_3227 PF01336 OB-fold nucleic acid binding domain Halar_3228 PF03471 Transporter associated domain Halar_3228 PF00571 CBS domain Halar_3228 PF01595 Cyclin M transmembrane N-terminal domain Halar_3230 PF00578 AhpC/TSA family Halar_3231 PF01300 Telomere recombination Halar_3231 PF03481 Putative GTP-binding controlling metal-binding Halar_3234 PF02632 BioY family Halar_3235 PF00005 ABC transporter Halar_3236 PF02361 Cobalt transport protein Halar_3238 PF13183 4Fe-4S dicluster domain Halar_3238 PF02754 Cysteine-rich domain Halar_3241 PF00753 Metallo-beta-lactamase superfamily Halar_3241 PF16123 Hydroxyacylglutathione hydrolase C-terminus Halar_3245 PF01209 ubiE/COQ5 methyltransferase family Halar_3248 PF00535 Glycosyl transferase family 2 Halar_3255 PF02540 NAD synthase Halar_3255 PF00117 Glutamine amidotransferase class-I Halar_3255 PF00958 GMP synthase C terminal domain Halar_3256 PF02770 Acyl-CoA dehydrogenase, middle domain Halar_3256 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Halar_3256 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Halar_3261 PF01266 FAD dependent oxidoreductase Halar_3265 PF00118 TCP-1/cpn60 chaperonin family Halar_3267 PF01487 Type I 3-dehydroquinase Halar_3269 PF01931 Protein of unknown function DUF84 Halar_3270 PF00535 Glycosyl transferase family 2 Halar_3276 PF01145 SPFH domain / Band 7 family Halar_3277 PF01547 Bacterial extracellular solute-binding protein Halar_3278 PF00528 Binding-protein-dependent transport system inner membrane component Halar_3279 PF00005 ABC transporter Halar_3279 PF08402 TOBE domain Halar_3282 PF01546 Peptidase family M20/M25/M40 Halar_3284 PF17191 RecG wedge domain Halar_3284 PF00271 Helicase conserved C-terminal domain Halar_3284 PF00270 DEAD/DEAH box helicase Halar_3289 PF02867 Ribonucleotide reductase, barrel domain Halar_3289 PF03477 ATP cone domain Halar_3289 PF00317 Ribonucleotide reductase, all-alpha domain Halar_3290 PF00268 Ribonucleotide reductase, small chain Halar_3292 PF00696 Amino acid kinase family Halar_3292 PF01842 ACT domain Halar_3292 PF13840 ACT domain Halar_3295 PF02386 Cation transport protein Halar_3296 PF00285 Citrate synthase, C-terminal domain Halar_3302 PF02589 LUD domain Halar_3302 PF13183 4Fe-4S dicluster domain Halar_3302 PF11870 Domain of unknown function (DUF3390) Halar_3303 PF16123 Hydroxyacylglutathione hydrolase C-terminus Halar_3303 PF00753 Metallo-beta-lactamase superfamily Halar_3305 PF00085 Thioredoxin Halar_3308 PF01174 SNO glutamine amidotransferase family Halar_3309 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Halar_3309 PF01502 Phosphoribosyl-AMP cyclohydrolase Halar_3321 PF00491 Arginase family Halar_3327 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Halar_3329 PF13378 Enolase C-terminal domain-like Halar_3329 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Halar_3331 PF07969 Amidohydrolase family Halar_3336 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Halar_3337 PF00528 Binding-protein-dependent transport system inner membrane component Halar_3339 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_3339 PF00005 ABC transporter Halar_3340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_3340 PF00005 ABC transporter Halar_3343 PF07364 Metallopeptidase family M81 Halar_3343 PF07171 MlrC C-terminus Halar_3344 PF07969 Amidohydrolase family Halar_3345 PF07969 Amidohydrolase family Halar_3346 PF13291 ACT domain Halar_3346 PF00291 Pyridoxal-phosphate dependent enzyme Halar_3347 PF01546 Peptidase family M20/M25/M40 Halar_3347 PF07687 Peptidase dimerisation domain Halar_3349 PF00291 Pyridoxal-phosphate dependent enzyme Halar_3351 PF01244 Membrane dipeptidase (Peptidase family M19) Halar_3352 PF00144 Beta-lactamase Halar_3356 PF00850 Histone deacetylase domain Halar_3369 PF00490 Delta-aminolevulinic acid dehydratase Halar_3370 PF00202 Aminotransferase class-III Halar_3371 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Halar_3371 PF03900 Porphobilinogen deaminase, C-terminal domain Halar_3374 PF03458 UPF0126 domain Halar_3376 PF05362 Lon protease (S16) C-terminal proteolytic domain Halar_3376 PF00004 ATPase family associated with various cellular activities (AAA) Halar_3378 PF00902 Sec-independent protein translocase protein (TatC) Halar_3379 PF00902 Sec-independent protein translocase protein (TatC) Halar_3382 PF01728 FtsJ-like methyltransferase Halar_3386 PF00582 Universal stress protein family Halar_3390 PF03069 Acetamidase/Formamidase family Halar_3391 PF00248 Aldo/keto reductase family Halar_3392 PF01212 Beta-eliminating lyase Halar_3393 PF01590 GAF domain Halar_3393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Halar_3393 PF00512 His Kinase A (phospho-acceptor) domain Halar_3393 PF08446 PAS fold Halar_3393 PF00360 Phytochrome region Halar_3394 PF02272 DHHA1 domain Halar_3394 PF01411 tRNA synthetases class II (A) Halar_3394 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Halar_3400 PF08442 ATP-grasp domain Halar_3400 PF00549 CoA-ligase Halar_3401 PF00549 CoA-ligase Halar_3401 PF02629 CoA binding domain Halar_3403 PF00291 Pyridoxal-phosphate dependent enzyme Halar_3405 PF14572 Phosphoribosyl synthetase-associated domain Halar_3405 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Halar_3407 PF01266 FAD dependent oxidoreductase Halar_3409 PF00202 Aminotransferase class-III Halar_3413 PF00202 Aminotransferase class-III Halar_3414 PF00528 Binding-protein-dependent transport system inner membrane component Halar_3415 PF00528 Binding-protein-dependent transport system inner membrane component Halar_3416 PF00005 ABC transporter Halar_3416 PF08402 TOBE domain Halar_3418 PF00180 Isocitrate/isopropylmalate dehydrogenase Halar_3422 PF00781 Diacylglycerol kinase catalytic domain Halar_3424 PF00970 Oxidoreductase FAD-binding domain Halar_3424 PF00111 2Fe-2S iron-sulfur cluster binding domain Halar_3424 PF00175 Oxidoreductase NAD-binding domain Halar_3426 PF00005 ABC transporter Halar_3427 PF00005 ABC transporter Halar_3427 PF12399 Branched-chain amino acid ATP-binding cassette transporter Halar_3429 PF02653 Branched-chain amino acid transport system / permease component Halar_3431 PF02538 Hydantoinase B/oxoprolinase Halar_3432 PF01968 Hydantoinase/oxoprolinase Halar_3432 PF05378 Hydantoinase/oxoprolinase N-terminal region Halar_3436 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Halar_3437 PF00528 Binding-protein-dependent transport system inner membrane component Halar_3438 PF12911 N-terminal TM domain of oligopeptide transport permease C Halar_3438 PF00528 Binding-protein-dependent transport system inner membrane component Halar_3439 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_3439 PF00005 ABC transporter Halar_3440 PF03328 HpcH/HpaI aldolase/citrate lyase family Halar_3441 PF13607 Succinyl-CoA ligase like flavodoxin domain Halar_3441 PF00583 Acetyltransferase (GNAT) family Halar_3441 PF13380 CoA binding domain Halar_3443 PF01230 HIT domain Halar_3447 PF10609 NUBPL iron-transfer P-loop NTPase Halar_3459 PF00483 Nucleotidyl transferase Halar_3459 PF01050 Mannose-6-phosphate isomerase Halar_3464 PF00313 'Cold-shock' DNA-binding domain Halar_3467 PF02163 Peptidase family M50 Halar_3467 PF00571 CBS domain Halar_3471 PF02080 TrkA-C domain Halar_3471 PF03600 Citrate transporter Halar_3481 PF01370 NAD dependent epimerase/dehydratase family Halar_3484 PF02633 Creatinine amidohydrolase Halar_3485 PF00664 ABC transporter transmembrane region Halar_3485 PF00005 ABC transporter Halar_3491 PF13686 DsrE/DsrF/DrsH-like family Halar_3492 PF01206 Sulfurtransferase TusA Halar_3493 PF00581 Rhodanese-like domain Halar_3493 PF00753 Metallo-beta-lactamase superfamily Halar_3494 PF04143 Sulphur transport Halar_3506 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Halar_3506 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Halar_3507 PF00795 Carbon-nitrogen hydrolase Halar_3513 PF01336 OB-fold nucleic acid binding domain Halar_3513 PF02811 PHP domain Halar_3513 PF14579 Helix-hairpin-helix motif Halar_3513 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Halar_3513 PF07733 Bacterial DNA polymerase III alpha NTPase domain Halar_3514 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Halar_3514 PF02769 AIR synthase related protein, C-terminal domain Halar_3514 PF00586 AIR synthase related protein, N-terminal domain Halar_3516 PF00004 ATPase family associated with various cellular activities (AAA) Halar_3516 PF06480 FtsH Extracellular Halar_3516 PF01434 Peptidase family M41 Halar_3516 PF17862 AAA+ lid domain Halar_3517 PF00270 DEAD/DEAH box helicase Halar_3517 PF00271 Helicase conserved C-terminal domain Halar_3517 PF08494 DEAD/H associated Halar_3518 PF01546 Peptidase family M20/M25/M40 Halar_3518 PF07687 Peptidase dimerisation domain Halar_3521 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Halar_3523 PF01264 Chorismate synthase Halar_3527 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Halar_3527 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Halar_3527 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Halar_3528 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Halar_3529 PF01037 Lrp/AsnC ligand binding domain Halar_3529 PF13404 AsnC-type helix-turn-helix domain Halar_3535 PF12804 MobA-like NTP transferase domain Halar_3535 PF01066 CDP-alcohol phosphatidyltransferase Halar_3537 PF00155 Aminotransferase class I and II Halar_3539 PF01926 50S ribosome-binding GTPase Halar_3539 PF13167 GTP-binding GTPase N-terminal Halar_3539 PF16360 GTP-binding GTPase Middle Region Halar_3542 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) Halar_3543 PF01595 Cyclin M transmembrane N-terminal domain Halar_3543 PF03471 Transporter associated domain Halar_3543 PF00571 CBS domain Halar_3544 PF02568 Thiamine biosynthesis protein (ThiI) Halar_3544 PF02926 THUMP domain Halar_3546 PF00291 Pyridoxal-phosphate dependent enzyme Halar_3548 PF03190 Protein of unknown function, DUF255 Halar_3550 PF02843 Phosphoribosylglycinamide synthetase, C domain Halar_3550 PF02844 Phosphoribosylglycinamide synthetase, N domain Halar_3550 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Halar_3553 PF00378 Enoyl-CoA hydratase/isomerase Halar_3554 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Halar_3554 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Halar_3555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Halar_3555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Halar_3556 PF00108 Thiolase, N-terminal domain Halar_3556 PF02803 Thiolase, C-terminal domain Halar_3557 PF00313 'Cold-shock' DNA-binding domain Halar_3573 PF00581 Rhodanese-like domain Halar_3573 PF00753 Metallo-beta-lactamase superfamily Halar_3581 PF05138 Phenylacetic acid catabolic protein Halar_3584 PF01883 Iron-sulfur cluster assembly protein Halar_3590 PF00005 ABC transporter Halar_3591 PF01458 Uncharacterized protein family (UPF0051) Halar_3592 PF01458 Uncharacterized protein family (UPF0051) Halar_3609 PF00313 'Cold-shock' DNA-binding domain Halar_3612 PF02272 DHHA1 domain Halar_3612 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Halar_3612 PF01411 tRNA synthetases class II (A) Halar_3614 PF16363 GDP-mannose 4,6 dehydratase Halar_3615 PF00291 Pyridoxal-phosphate dependent enzyme Halar_3616 PF00108 Thiolase, N-terminal domain Halar_3616 PF02803 Thiolase, C-terminal domain Halar_3618 PF00561 alpha/beta hydrolase fold Halar_3619 PF18357 Diphteria toxin repressor SH3 domain Halar_3619 PF01325 Iron dependent repressor, N-terminal DNA binding domain Halar_3619 PF02742 Iron dependent repressor, metal binding and dimerisation domain Halar_3622 PF00465 Iron-containing alcohol dehydrogenase Halar_3624 PF00730 HhH-GPD superfamily base excision DNA repair protein Halar_3624 PF00633 Helix-hairpin-helix motif Halar_3627 PF00127 Copper binding proteins, plastocyanin/azurin family Halar_3629 PF00033 Cytochrome b/b6/petB Halar_3630 PF00032 Cytochrome b(C-terminal)/b6/petD Halar_3641 PF01593 Flavin containing amine oxidoreductase Halar_3645 PF00326 Prolyl oligopeptidase family Halar_3651 PF01642 Methylmalonyl-CoA mutase Halar_3651 PF02310 B12 binding domain Halar_3654 PF02464 Competence-damaged protein Halar_3654 PF18146 Damage-inducible protein CinA KH domain Halar_3654 PF00994 Probable molybdopterin binding domain Halar_3655 PF00578 AhpC/TSA family Halar_3659 PF05191 Adenylate kinase, active site lid Halar_3662 PF00710 Asparaginase, N-terminal Halar_3662 PF17763 Glutaminase/Asparaginase C-terminal domain Halar_3668 PF01593 Flavin containing amine oxidoreductase Halar_3670 PF01676 Metalloenzyme superfamily Halar_3670 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Halar_3673 PF02374 Anion-transporting ATPase Halar_3673 PF17886 HSP20-like domain found in ArsA Halar_3675 PF00106 short chain dehydrogenase Halar_3676 PF04493 Endonuclease V Halar_3678 PF00082 Subtilase family Halar_3688 PF13361 UvrD-like helicase C-terminal domain Halar_3688 PF00580 UvrD/REP helicase N-terminal domain Halar_3689 PF00557 Metallopeptidase family M24 Halar_3689 PF01321 Creatinase/Prolidase N-terminal domain Halar_3691 PF00677 Lumazine binding domain Halar_3694 PF17912 MalK OB fold domain Halar_3694 PF00005 ABC transporter Halar_3695 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Halar_3695 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Halar_3697 PF00162 Phosphoglycerate kinase Halar_3717 PF00156 Phosphoribosyl transferase domain Halar_3720 PF00701 Dihydrodipicolinate synthetase family Halar_3721 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_3721 PF00005 ABC transporter Halar_3722 PF00005 ABC transporter Halar_3722 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Halar_3724 PF00528 Binding-protein-dependent transport system inner membrane component Halar_3725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Halar_3730 PF13378 Enolase C-terminal domain-like Halar_3730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Halar_3731 PF00294 pfkB family carbohydrate kinase Halar_3732 PF01434 Peptidase family M41 Halar_3732 PF00004 ATPase family associated with various cellular activities (AAA) Halar_3732 PF17862 AAA+ lid domain Halar_3734 PF00005 ABC transporter Halar_3735 PF00528 Binding-protein-dependent transport system inner membrane component Halar_3736 PF00497 Bacterial extracellular solute-binding proteins, family 3