LOCUS BK013383 3768 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Esthiorhiza.1_11 genomic sequence. ACCESSION BK013383 VERSION BK013383.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Esthiorhiza.1_11 ORGANISM ssRNA phage Esthiorhiza.1_11 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus neotelluricola. REFERENCE 1 (bases 1 to 3768) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3768) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-3768 MN035739.1 1-3768 FEATURES Location/Qualifiers source 1..3768 /organism="ssRNA phage Esthiorhiza.1_11" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786013" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Esthiorhiza.1_11" gene 127..1473 /gene="Esthiorhiza.1_11_1" CDS 127..1473 /gene="Esthiorhiza.1_11_1" /codon_start=1 /product="maturation protein" /protein_id="DAD49929.1" /translation="MSGMVTQSRVLSKREISYRTRYGTYPWNENVQTIDPETQTTTSY RTTGGTEGEDQDLREAARVLRNGFSYNPEFDHGHEFFTTRTRRTTSHPYWEGWAPTNP GWSNPSGYQGPLLAMGPGNYFMPSFPALRRMTDSDIRSYGSRAVSASSPTAPQAALST LTGEVLLDGGLPYLGSQTIGLRGFKSASAKRAGSDYLNSQFGWLPVYADVVKLVNSLK SANATIKQLEKDAGQNVRRRFVFPTEQTVTETVLTGVAGSTFGGQSAFYNVDPLILQG SGDGGAYEVHVMSSRKRDIYFRGCFTYHMDLGNDIRGKLTRFEQLGNKLLGTRLNASA LWELAPWSWLVDWQSTIGVALGNASMLSEDGLVMRYGYLMCHTVDTDTYTTRGLSFRG GTLGDVHTQYRRETKERVRATPFGFGLDLSTFSAKQWSILAALGMTRGNNSLRLTS" gene 1558..1917 /gene="Esthiorhiza.1_11_2" CDS 1558..1917 /gene="Esthiorhiza.1_11_2" /codon_start=1 /product="coat protein" /protein_id="DAD49930.1" /translation="MAYADPQSVTTSAANTLPRVGSGVGVGSFSNPDGTVQLSVSHQN GKRVRRQARVSISKISADPLLTNVNVRLSASAYIVVDVPNQGFTLTEQTQLITGLTTW LTAATNANAIKLLGGEN" gene 1917..2021 /gene="Esthiorhiza.1_11_3" CDS 1917..2021 /gene="Esthiorhiza.1_11_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD49931.1" /translation="MTVIPTDLITIGLVITVLVLMGRPVRTGRRVNRP" gene 2065..>3768 /gene="Esthiorhiza.1_11_4" CDS 2065..>3768 /gene="Esthiorhiza.1_11_4" /codon_start=1 /transl_except=(pos:2065..2067,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD49932.1" /translation="MKSLTAFLQVLVGEAGKRCHISTIRDQKTIADRVKHEGYSFLTI TLPSFGKDLQKGLDQGKIAHDHFAGFQRSGGLPRFLGGFLELVFDRGTGLLLDVPSIE AIRCLHQITSTFAKVELPCSENRIARAKQRYIECEQEVRLGDQNLTPELAQAFEKVSR ILFADVFSEIDLAVYQGDLVPRHGPGATADRLRGNAKFDQKRWTHRLEEYFPAGEFLL PNWRYHSQLDGVDFLEPGDEMPVRVITVPKTLKTPRIIAIEPTCMQYAQQALLARFVE GIERSYSLSPFIGFTNQIPNRDLACIGSIHGTLATLDLSEASDRVSNQHVRLLLRQHP HLRGAVEACRSRKADVDGKVFRLAKFASMGSALCFPMEAMVFLTIIFVGISQQLNRPM TKELLREFRGQVRVYGDDIIVPVDMMEPVSHMLSAFGLKVNVDKSFGTGKFRESCGGD YYDGRRITPVRVRSLFPTTLTDVTELISTVALRNLLFQEGWSESVDWLDDLVKPILRF YPEVYPTSPVLGRHTWDVPRARKMSAKLQIPLVKGYVVSSILPVSKLEGAGALVKFFI KP" ORIGIN 1 ccctgagggc ccccctggtg cttttgtcac cctcacattt ctgtgagtcc tgcaacgaac 61 ccatggcgta cagtgtaggc ctacaggttc aatcgatccg gtcaatcgca caccgaaagg 121 gacaccatgt ccggaatggt cacacagtct cgcgtgctaa gtaagagaga gatctcttac 181 cgaacacgct acgggactta cccgtggaat gagaatgtgc agaccattga tccggagaca 241 cagacgacta cctcctatcg tacgacagga ggtactgagg gagaagatca ggacttgcga 301 gaagccgcac gcgttctgcg taatggtttc tcctataatc ctgaatttga ccacggacac 361 gagtttttta ctactcgtac tcgtagaacg acatctcacc cttactggga gggatgggcg 421 cctacgaatc caggttggag taatccatct ggataccaag gtcctcttct cgcaatgggt 481 ccgggcaatt acttcatgcc ctcgttccca gcgttgcgca ggatgactga cagcgacatt 541 cgatcttatg gatcgcgtgc cgtttctgcc agtagtccta ctgcacctca ggccgctctc 601 tcgacactaa ctggcgaggt tctccttgat ggaggccttc catacctcgg ttctcaaacg 661 attgggctaa ggggtttcaa gtcagcttcc gctaagcggg ctggctcgga ctaccttaac 721 tcccaattcg gatggctccc tgtgtatgca gacgtcgtca agttagtcaa cagcttgaag 781 tcggctaacg ccactatcaa gcagctcgag aaggatgccg gacagaacgt ccggcggcgg 841 ttcgtcttcc ccaccgagca gactgtcacc gaaaccgtgc ttaccggcgt agccggtagc 901 acattcggag ggcaatctgc tttttataat gtcgatcccc tgattcttca ggggagcggc 961 gacggtgggg cgtacgaggt ccacgtgatg tcatctcgta agagagacat ctatttcaga 1021 gggtgtttta cctaccacat ggatctcggt aacgatatcc gtggtaagtt gacacgtttc 1081 gaacaacttg gaaacaagtt gctcggcacg aggctaaatg cctcggctct gtgggagctc 1141 gcaccatggt cctggctcgt agactggcag tcgacgattg gcgttgcctt gggcaacgcg 1201 tcgatgctgt cagaagacgg gctcgtcatg aggtatgggt atctgatgtg ccacacagtg 1261 gacacagata cctatacaac tcgaggcctc tcctttcgtg gagggaccct tggggacgtt 1321 cacacgcaat atcgtcgaga gacgaaggaa cgtgtgcgcg cgacgccttt cggtttcggg 1381 ctagacctta gcacattcag tgctaagcaa tggtccatcc ttgctgctct cggtatgacc 1441 cgaggcaaca actcgctcag attgacttcc tgagcaaccc tgtgtgcgtg gcaatcctgt 1501 ccgcacaccc ctcactagac aactgaatag tccgttgtcc atgcaaagga tgctgccatg 1561 gcttacgccg acccccagag tgtcaccacc tccgccgcta acacgcttcc gcgtgttggt 1621 agtggcgtag gcgtcgggag tttttccaac cccgacggta ctgtccagct cagcgtctcg 1681 caccagaatg gtaagcgagt tcgccggcag gccagggtgt ccatctccaa gatttctgct 1741 gatccacttc tcacgaatgt gaacgttcgc ctttcggcga gcgcttacat cgtggtggat 1801 gttccgaatc agggttttac cctgaccgag cagacgcagc tgatcacagg tctcacgacc 1861 tggctcactg cagctacgaa cgctaacgcg atcaagcttc tcggaggtga gaactgatga 1921 cagtgattcc taccgacctg attacaatcg ggttggtgat cactgtcttg gttctgatgg 1981 ggcggcccgt tcgcacgggc cgcagggtca atcgacccta gttgcgccat ggctgaggat 2041 ccgcgagctc tgttaggagt cacggtgaaa agcctgaccg cattcttgca ggtgcttgtc 2101 ggcgaagccg gcaagcgatg tcacatcagc accatccgcg atcaaaaaac aatcgcggat 2161 cgtgtcaaac acgaggggta ttcgtttctc acgattaccc tgccttcctt cggtaaggac 2221 ctccaaaaag gtctagacca agggaagatc gctcacgacc atttcgctgg tttccagcga 2281 tctggcgggc tcccccgatt tctcggaggt ttccttgagc ttgtgtttga ccgtggtact 2341 ggtctgttgc tcgatgtacc ctctatcgaa gcaatccggt gtcttcacca gattacttcg 2401 acgttcgcaa aggtcgagct gccctgttca gagaacagga tagctcgtgc gaagcagaga 2461 tacattgagt gtgagcagga agtccgcctc ggtgaccaaa atctcacacc tgagcttgct 2521 caggcgttcg agaaggtcag ccgaatcctg ttcgcggacg ttttctccga gatagacctt 2581 gcggtctatc aaggcgatct cgtgccgcgt catggacccg gagccaccgc tgatcgtctc 2641 cgcggaaacg cgaagttcga tcaaaagcga tggactcacc gtcttgaaga gtactttcca 2701 gcgggggagt ttttgcttcc caactggaga taccactctc agctcgacgg tgtggatttc 2761 ctcgaacccg gggatgagat gcccgttagg gtcatcaccg tccccaagac gctcaagact 2821 cctcgaatca ttgcgattga gcccacgtgc atgcaatatg cacagcaggc tctcctcgcg 2881 cgattcgtgg aagggataga gagaagttac tccctctcgc ccttcatcgg attcacgaac 2941 cagatcccca acagggatct tgcgtgtata ggttccatac atggaacctt ggccaccctc 3001 gatttgagtg aggcttccga tcgtgtctcg aatcagcatg tacgactcct ccttcggcaa 3061 cacccccacc ttaggggtgc tgttgaagcc tgccgaagtc ggaaggctga tgtggatggc 3121 aaggtttttc gccttgccaa gttcgcgtcg atgggttcag ctctgtgttt tcccatggaa 3181 gcaatggtct tcttgaccat catctttgta gggatttcac agcagctcaa cagaccgatg 3241 accaaagaac tccttcggga gttccgaggc caggtgcgtg tctacgggga cgacatcatt 3301 gttcccgtag atatgatgga gccagtgtca cacatgcttt cagcttttgg gctgaaagtt 3361 aacgtggaca agtctttcgg aactggaaaa ttccgagagt cttgtggtgg ggactactat 3421 gacgggcgca ggatcactcc tgtgcgcgtt cgtagtctct tccccacgac actgacagac 3481 gtcactgagc tcatttccac agtagctctc agaaacctcc tcttccagga gggttggtct 3541 gagtctgtgg attggctaga cgacttggtg aagccaatct tgcgcttcta cccggaagtc 3601 tatccgacga gcccagtgtt gggtcgccac acatgggatg tgcctcgtgc acggaaaatg 3661 agtgcgaagc tgcagatccc ccttgtaaag ggatatgtgg tttcgagcat ccttccagtt 3721 tccaagctgg aaggggctgg cgcccttgtc aagttcttca ttaaaccc //