LOCUS BK014044 4057 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Esthiorhiza.1_4 genomic sequence. ACCESSION BK014044 VERSION BK014044.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Esthiorhiza.1_4 ORGANISM ssRNA phage Esthiorhiza.1_4 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Catindovirus; Catindovirus agricola. REFERENCE 1 (bases 1 to 4057) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4057) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034475 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4057 /organism="ssRNA phage Esthiorhiza.1_4" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786019" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Catindovirus; Catindovirus Esthiorhiza.1_4" gene 106..1449 /gene="Esthiorhiza.1_4_1" CDS 106..1449 /gene="Esthiorhiza.1_4_1" /codon_start=1 /product="maturation protein" /protein_id="DAD52238.1" /translation="MDMTMPGGYVYRTRYLIPKMKSLNGPLVNNEPTGFVRNRALRFG SLQEFNQQDLRTLQSTYSFRTSKDGQMPDLISGQAILSYFLQRGIPSSLDNGHEFYTT KTYQTFSHTDVLMSSQSGTTWARGCIVPNGGPQIPNIPILDVNYYGNKAISRIAPTAP NANLAQTAAEILREKGLKLPSNEYADWLKSRATLAQTAGRGYLNLSFGWIPLISDLVK IVKQLLNITEEIRRYTTLSTLETVRRYDFQTDDQVSQTPISRVNLNIGPDSNIDNWSE LYVNGKYNGTGTRTDKLSQRIYLKAKFTYALNPGKGLLDQLETYESIANKLLGTRITP AVLWELTPWSWLVDWIVDIQSALTSASLLQNDGLLMHYAYLMRETHASTTYTTSDIEF IDGPRGPFHATTHYVKKERVRGTPFGFGLNPAQFTDRQWAILTALALSKSGEYRG" gene 1545..1907 /gene="Esthiorhiza.1_4_2" CDS 1545..1907 /gene="Esthiorhiza.1_4_2" /codon_start=1 /product="coat protein" /protein_id="DAD52239.1" /translation="MFSDPQSVTIGSANSLPRTGISNNSGSFTKDDGTVALTVAHSKS KANRFRSTARVDFSKIVADPLVTGTNLRLSSSVYIVIDRPINGFTVAEQVQLITGLTT WLTASTNANATKLSGAEV" gene 2197..3993 /gene="Esthiorhiza.1_4_3" CDS 2197..3993 /gene="Esthiorhiza.1_4_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52240.1" /translation="MSRVEDEGLSFLTITLSNYGSDLQKGLDRGYVARDLFTGFQFRG GLPQFLGGFLELVFDRDTGLLLRTPSVDAIFCVRQLTLMWAKIRMDVSDRRKKSAITK YVECEFDVRTESNLFHKSGVAERADELGRMQLLLGKRIERFGRLSLSIFGRVFSDVAN AIYSENLVPKHGPGSTADGLLGNAKWSGRVWTDRLEAVFPAWKYASANARDYLERGFV HQDPGTELPVKVITVPKTMKTPRIIAMEPTHMMYMQQALLYEFVKAIERDKLTRGLIG FLDQSPNQRLAREGSLKGNLATLDLSEASDRVSNQHVREMLRRHPLLAEAVDATRSRK ADVRGHGVIRLAKFASMGSALCFPIEAMVFCTVVFMGIEDALGKPLTRKDIKSFLGKV RIYGDDIVVPVEYTSSVVSSLETFGFKVNTGKSFWTGKFRESCGKDYYDGVDITVVRL RSLLPARHWSKEKSEDVISFYSFRNLAYKAGLWRVVRWADAYMDELTWLNPALSDDSS GLGRVSYLPLVPYGSKVRWDSDLQKPVILALTVREKPQRNSVDGYPALLKWFCKRDEL PFVDVNHLIYSGRPRSVDIKLRWVDPHQGKVA" ORIGIN 1 ccttaaggac cctcccggtg cgtaacccgt acctgctaac caatgttagc gctctgccag 61 tagatagcag tgcatccaac tattggctaa catcctgaaa accgaatgga catgaccatg 121 cctggaggct acgtttatcg aactcgttat cttattccta agatgaagag cctgaacggc 181 ccgcttgtta ataatgaacc cactgggttt gttagaaaca gagcgttgcg ttttggttcc 241 cttcaagagt tcaatcaaca agacctcagg acattgcaga gcacttactc gtttcgtacg 301 agtaaggatg gtcagatgcc ggatttgatc tctgggcagg caatactttc gtatttcctg 361 cagagaggca ttccgtcatc cctcgataat ggccacgaat tctacacgac caagacatat 421 cagacgttca gtcatactga cgtccttatg tctagtcaaa gtggaactac atgggctaga 481 gggtgcattg tacctaatgg tggacctcaa atacctaaca ttcccatctt agatgtgaat 541 tattacggca ataaggccat ctcaaggatc gcgccgaccg ctccgaacgc caatctagct 601 caaaccgccg cagaaatact gcgggaaaag ggtttgaagc tacctagtaa tgagtatgcc 661 gactggctaa aatcaagggc cacactcgca caaactgcgg gacgtggata ccttaacctt 721 agtttcggtt ggatacctct tattagtgac cttgtcaaga ttgtaaagca gcttctaaat 781 atcaccgaag aaattcggcg gtacacgacg ctgtctacac ttgagacggt caggcgttac 841 gatttccaaa ccgacgatca ggtgtctcag acacctatta gtcgggttaa cctcaacata 901 gggccagatt ctaatataga taactggtct gagttgtacg ttaatggaaa atacaatgga 961 accggtaccc ggacagataa gctttcacag cgtatctatc ttaaagcaaa gtttacctac 1021 gccttgaacc ccggtaaggg gctcttggat cagttggaaa cttacgagag catagctaac 1081 aagctactcg gcacccggat tactccggct gtgctttggg aactgactcc ttggtcatgg 1141 ctcgtcgact ggatagtaga cattcaatca gcacttacaa gtgctagtct gctccagaat 1201 gacgggttgc tgatgcatta tgcgtacttg atgagggaaa cccacgcaag tactacatat 1261 accacgagtg acatcgaatt tatcgatggc cctcgtgggc ccttccacgc tacgactcac 1321 tatgtgaaga aggagcgtgt taggggcaca ccattcggtt ttggccttaa tccggctcag 1381 tttactgacc ggcaatgggc catcctcact gctcttgctt tgagtaagag tggcgaatat 1441 agaggatgat tatggggttt caggccccta cctctagaaa atatgctgtc gttgacagta 1501 tatataattg aattaacaat taaatagaaa gtcgagagac agtcatgttc tcagatcctc 1561 agtcagtcac gatcggtagt gccaattcgc ttccgcgaac tggtatttcc aacaattccg 1621 ggtcctttac taaggacgat ggaactgtgg cgcttacggt tgctcactct aagagtaaag 1681 caaaccgttt ccgctctacc gcacgtgtgg acttctcgaa gatcgtagct gatcctttgg 1741 tcaccggtac aaaccttcga ctttcgtcgt ctgtttatat cgtgattgac cgacccatca 1801 acggtttcac cgttgctgag caggttcagc ttatcaccgg gcttactacc tggctgacag 1861 cttcgacgaa tgccaacgcc actaaactta gtggcgcaga ggtttgattt catatgatga 1921 gctaacgctc atcgtactgg tcattacctc gctgacagtg gctgctgctg gtgctctctt 1981 tttgggagca tcggctttgc ggccgccgcg tcgaaacaac aggcattagc aatagtgtct 2041 tagtgtttcg cttgaagatc cttacatgac ctggaatgtc caaaccctct attaggaagg 2101 ctagacatga aaagtctggt aagtctcttg caagctgttc tccaagacat ggaggacaga 2161 tgtcaggtta gcaccactcg tgatctaaaa acgatcatga gtcgtgtcga agatgagggg 2221 ttgtcgtttt taacgataac cctgtctaac tacggaagtg acctccaaaa aggtcttgac 2281 cgtggttatg tcgctcgcga cctctttact ggtttccagt ttagaggtgg tctcccccaa 2341 tttcttggag gtttcctcga gcttgtcttc gaccgtgaca ctggtttact actccgcaca 2401 cctagtgtgg atgccatatt ttgcgtacgt caattaacat tgatgtgggc taaaatacgg 2461 atggacgtct ccgacaggag aaagaagtcc gccataacta agtatgtgga gtgtgaattt 2521 gatgttcgaa ctgagagtaa tctgtttcac aagtcaggag ttgctgaacg agctgatgag 2581 ctcggacgta tgcaactact gcttggaaaa cgaatcgaaa gattcggcag actatctttg 2641 tccatattcg gacgcgtatt ctcagacgtg gctaacgcca tttactctga gaatcttgtt 2701 ccgaaacatg gccccggctc tacggctgac ggactacttg gcaacgccaa gtggtcaggc 2761 agagtatgga ccgatcgcct tgaggctgta ttccctgctt ggaaatacgc ctctgcgaac 2821 gcacgagatt atctcgagcg gggattcgtt catcaagatc ccggtactga attacctgtc 2881 aaggtaatta ctgtacctaa gacaatgaaa acgcctcgaa tcattgcaat ggagccgacg 2941 catatgatgt atatgcagca ggctcttttg tatgagttcg tgaaagccat cgaacgagat 3001 aaactcactc gtggtttgat cggattccta gatcagtcgc ctaatcagcg cctagctagg 3061 gaaggttctc ttaaagggaa tcttgctaca ctcgacttga gtgaagcgtc cgaccgcgtt 3121 tccaatcagc atgtacggga gatgctaagg cgccaccctc tcttggcaga ggcggtggat 3181 gccacgcgtt cccggaaggc tgacgtacga ggccacggag ttatccgttt ggccaagttc 3241 gcatctatgg gatcagcgct ctgtttccct atcgaagcaa tggtgttttg caccgttgtc 3301 ttcatgggaa ttgaagatgc gctaggtaaa ccactaacta ggaaggacat taagtctttc 3361 ctgggcaagg tgcgtatcta tggggatgat attgttgtcc ctgtagaata caccagtagt 3421 gtcgtcagtt cactggaaac ttttgggttt aaagtgaata ctggcaagag tttctggact 3481 ggtaagttca gagagtcttg cggcaaggac tactatgatg gggtcgacat aactgtcgtc 3541 cgtcttcgta gtctactccc tgcacgacac tggagtaaag agaagagtga agatgtaata 3601 tccttctaca gcttccgcaa cctggcctat aaggctgggt tatggagggt tgtacgttgg 3661 gcagatgcat atatggatga gcttacctgg ctcaacccgg cactgtccga cgactcttct 3721 ggcttggggc gagtatccta tcttcctctc gttccttatg gatcgaaagt tagatgggac 3781 tccgaccttc agaaaccagt gattctggct ctgactgtcc gggaaaaacc tcaacgtaat 3841 tcagttgacg gctatcccgc cctgctcaag tggttctgta aacgcgacga attgccattc 3901 gttgacgtga atcacctgat ttactctgga cgcccgcgta gcgtcgacat caaactacgc 3961 tgggttgatc cccaccaagg taaggtggca tagatcatcc ctatgacatc gtccgttata 4021 cggaagatgc tggtagctta atagcgccag gcaggag //