LOCUS BK014004 4367 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Esthiorhiza.2_2 genomic sequence. ACCESSION BK014004 VERSION BK014004.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Esthiorhiza.2_2 ORGANISM ssRNA phage Esthiorhiza.2_2 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus neoterradaptatum. REFERENCE 1 (bases 1 to 4367) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4367) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN032979 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4367 /organism="ssRNA phage Esthiorhiza.2_2" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786036" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Esthiorhiza.2_2" gene <1..151 /gene="Esthiorhiza.2_2_1" CDS <1..151 /gene="Esthiorhiza.2_2_1" /codon_start=2 /product="hypothetical protein" /protein_id="DAD52102.1" /translation="KWGSRHAQAFPLPYGVWRPFRGRQPLLGEGLPRITAVDRKELRC IEYQA" gene 135..1502 /gene="Esthiorhiza.2_2_2" CDS 135..1502 /gene="Esthiorhiza.2_2_2" /codon_start=1 /product="maturation protein" /protein_id="DAD52103.1" /translation="MSTKRRQSLPFSYGRGTERQEFSRAGPWSDRTSPPFYSPSTLRA DLTAPGLVGTQVTESENHPLWRKVSLGIPLSLEEASQGGDPLANIGGDFTMTKTSVIA PSYSAPFHWTSPWNLQNPAYRWVFHGPLVMPGYLSIVFPPAGRSSETELINYGTKAIA NCAPTNSVVDLSTAILEVLREGLPNLVGSLFWKDRARSIKDVSLSDEVDAVKHPSSEF LNVEFGWLPLINDVTKFAQGVAELSKRVEQLVKDSGKQVRRRYDFPPVDTSDVTVWRE NVSPGMYPDASLFYDPLKVNKGRVTRNRLTTVRRWFTGAFTYHIPPEWGDAMAGHGAL ARHLLGTSLTPEILWNLAPWSWAADWFTNAGDVLHNASEMSSELGLIIRYGYIMEHSI VRDVYVFEGETGFLPGYSGRPATLVLQTEVKLRRKATPFGFGLSTGLTSRQAAIVAAL GASRV" gene 1570..1938 /gene="Esthiorhiza.2_2_3" CDS 1570..1938 /gene="Esthiorhiza.2_2_3" /codon_start=1 /transl_except=(pos:1570..1572,aa:Met) /product="coat protein" /protein_id="DAD52104.1" /translation="MALTDPTTVTISGTAVVLPRVYGLGRESAYTSADGLVTLSVNHT LAKQGRERHVIRIDHSKLTANPFDSSQNMKVNMAAYTVFDLPPAGYTDPEALAVFVGF NTLLTANTNAVVTKVLGGES" gene 1940..2158 /gene="Esthiorhiza.2_2_4" CDS 1940..2158 /gene="Esthiorhiza.2_2_4" /codon_start=1 /transl_except=(pos:1940..1942,aa:Met) /product="hypothetical protein" /protein_id="DAD52105.1" /translation="MGPSIPRKGSNPPRGEQPLVGDPPNKGRWERRDDLEFNELDVRL RISYKTVLLVFVLFDVLRKVVDVSLSNF" gene 2308..4218 /gene="Esthiorhiza.2_2_5" CDS 2308..4218 /gene="Esthiorhiza.2_2_5" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52106.1" /translation="MKSLMSLWSMLAEESASICCTSAIRDIKTVSDRIEHEGLSFLTI TLPDFGKAIQNWLDLGQVGIHTSFQLERGGRLPRFLGGFFCRVFDRSSGLLLDEPCVA SIRALRQLTLAFGKIELECSPARKSKAIRNYIECELEVREFDRALTDRDLREFTSMSN LLFRSMFTALDRDVQYHRIVPKHGPGSTADGLSGNGKFNQAVWTTRLDPVFPVSEHLL PNWSHYDQLEEVHLNEPDSEVPVKVTLVPKTLKTPRVIAMEPTCMQYMQQGLLRSFLE HWKRDDFLHSVIGFDDQVPNQDLARQGSLDQRTATLDLSDASDRVSNQLVRAMFRPWP GLFQAVDATRSRRAVIPDTGEVIRLSKYASMGSALCFPVEAAVFTTLIFLGIQRSLNT SLSRRDLLGYVGSVRVFGDDLIVPSDHVLTVVQTLEHFGARVGLSKSFWTGKFRESCG REYFNGEDVSIVRIRQGFPTSLQDVDPVQSVVSLRNQLFWSGYWRTCRWLDDKIREVL RYFPDVEPGTGMLGRETTLTPRGERDHPNLFKPLVKAYHVEAKPPRDHLEGSGALLKC LLKLDTDLWLRGQAPWGPPDSSDEVPISPDAFRESLPESYEPHLERSGRPKSTSIKLG WGSPLTAVVGPA" ORIGIN 1 caagtggggg tcccggcacg cgcaagcatt ccccttgccc tatggtgtgt ggcgcccttt 61 ccgggggcgc caaccattgt tgggtgaggg attaccgcgg ataaccgcgg tggaccgaaa 121 ggagctccgg tgcattgagt accaagcgta ggcagtctct accctttagt tacgggagag 181 gcacggaacg tcaggagttt tcaagggcag ggccttggtc cgataggacc agccctccct 241 tttattctcc ttcaacgctt cgcgcagatc tgaccgcgcc aggtctcgta gggactcagg 301 tgactgagtc cgaaaatcat ccattgtggc ggaaggtttc gctcgggata cctctctctc 361 ttgaggaggc gtcccagggc ggtgacccgc tcgccaacat tggtggcgat ttcacgatga 421 caaagaccag tgttatagcg cctagttatt cagcgccgtt tcactggacg tcaccgtgga 481 atctgcagaa tccagcttac cgttgggtct ttcatggccc tttggtgatg ccgggttact 541 tgtcgatcgt cttcccgcca gctggtcgct cgagtgaaac cgagctgatc aactacggga 601 ctaaggcgat cgcaaactgc gcgccaacca atagcgtagt ggacttgtcc acagctattc 661 tcgaggtcct ccgtgaggga ctccccaatc ttgtggggtc ccttttctgg aaggaccgag 721 ctcgctcgat caaggacgtg tcattgtccg atgaagtgga tgctgtgaag catccctcga 781 gtgagttctt aaatgtcgag ttcggatggt tgcccctgat caacgacgtc accaagtttg 841 cacaaggtgt cgccgaactt agcaagcgag tggaacagct tgttaaggac tcgggtaagc 901 aagttagacg aaggtatgat tttccacctg ttgacacttc agatgtgacc gtttggaggg 961 aaaacgtttc tccgggtatg tacccggacg cgtcactctt ctacgatcct ctgaaggtca 1021 ataaggggcg agttaccaga aaccgtttaa cgacggtacg tcgatggttt acaggtgcct 1081 ttacctatca tatccctcca gagtgggggg acgcgatggc ggggcacggt gctttagcga 1141 gacatctgct tggcaccagc ctaacacctg agattctctg gaacttagct ccctggagct 1201 gggccgctga ctggttcacc aacgctggcg atgttctaca caacgctagt gaaatgtcca 1261 gtgagttagg tcttatcatt cgatacggct acatcatgga gcattcaatt gtccgtgatg 1321 tctacgtttt cgaaggagaa accgggtttc tacccggcta ctccggccga cccgctacgc 1381 tcgtcctcca aacggaggtt aagctacgca ggaaggctac gccctttggt ttcggactgt 1441 ctaccggcct gactagccgg caggcggcca ttgtggctgc actcggcgca agccgagtct 1501 gaccacgaat gttgaccgca tgtcaaacgc caagaggggt cagagaccct ggccctagga 1561 gtgatgcccg tggcacttac cgatccaaca accgtcacca tcagtggcac cgctgtcgtc 1621 cttccccgtg tctacgggtt gggacgggag tcggcgtaca cgtcggcaga cggcctagtg 1681 acgctgtccg ttaaccatac ccttgcaaaa cagggtcggg aacggcacgt catcaggatc 1741 gatcattcga agctaacggc aaatccgttt gactcgagcc agaatatgaa ggtcaatatg 1801 gcggcttaca ccgtcttcga cctccctccg gccgggtaca cggacccgga agcactcgct 1861 gtctttgtgg gtttcaacac ccttctgacg gcgaatacga atgcggtcgt caccaaagtt 1921 cttggtggcg agtcgtagtg tgggtcccag cataccgcga aaggggagta atcctccgag 1981 gggtgaacaa cccctggtgg gtgatccgcc taacaaagga cgctgggaac gtcgtgacga 2041 tctggagttc aatgaactag atgttcgcct gaggattagt tacaagactg ttcttctcgt 2101 gttcgtcctg ttcgacgttc ttcgaaaagt cgtcgacgtc tctctaagca acttttgacc 2161 gtttggtagc cccgtaaagg gcacggtcat tagaagccac tggaagacgt gactgctctt 2221 cgtgagcatc accatgatag cgagctggaa agcccgctgt gagtgtaccg ggctatggac 2281 tcggtgtccc cctatatagg aggtccgatg aaaagcctga tgtcactctg gtccatgctg 2341 gcagaggaat ccgccagcat atgctgtacg agtgccatcc gagacattaa gaccgtctcg 2401 gatcggatcg aacatgaggg gttgtcgttt ctcacgatta ccctacctga ttttggaaaa 2461 gccattcaaa actggctcga ccttggtcag gtcggcatcc acacctcgtt ccagctggag 2521 cgaggtggaa ggctcccccg ttttctcgga ggtttcttct gccgtgtgtt cgaccggagt 2581 agtggcttgt tgctcgacga accctgtgtc gcctctattc gagctttgcg ccagcttacg 2641 ctggcgtttg gcaagattga acttgagtgc tccccagcac gaaagtccaa ggcgatcagg 2701 aattacatcg agtgtgagct tgaggtacgt gagttcgacc gagctcttac agatagggat 2761 ctgcgagagt tcactagtat gtcgaacttg cttttcaggt cgatgtttac ggcgctggac 2821 agagatgtcc agtaccatcg catcgtcccg aagcatggtc caggatcaac agctgacgga 2881 ctttccggaa acgggaagtt caatcaggct gtctggacta cacggctcga tccggttttt 2941 ccggttagcg agcatctcct tcccaactgg agtcactatg accagttgga ggaggttcac 3001 ctcaacgaac ccgattccga ggtgcctgta aaggtcacct tggtccctaa aacgttgaaa 3061 actcctcgag taatcgcgat ggaacctact tgcatgcagt atatgcagca agggctattg 3121 cgctctttcc tcgagcactg gaagagggat gacttcctcc acagtgtgat cggatttgac 3181 gaccaagtcc ctaatcagga cctagcgcga caaggttcgc ttgatcagcg aaccgcgaca 3241 ctcgatttga gtgacgcttc cgatcgtgtt tccaatcagc tcgtccgcgc catgtttcgt 3301 ccatggcctg gtttgttcca ggccgtagat gcgacgcggt caaggcgggc tgtcataccc 3361 gataccggtg aagttatccg gttgtcgaag tatgcgtcta tgggttcagc actttgcttc 3421 cctgtagaag cagcggtatt cactacgctg atctttttgg ggattcagag atcgctcaac 3481 acgtcacttt cccgacgcga cctattaggt tacgtcggct cggtgcgcgt ctttggggac 3541 gatctaattg ttccctcaga ccatgtacta acagtggttc agacgctcga gcatttcggt 3601 gcccgggtgg gtctgagcaa gtctttctgg actggaaagt tcagggagag ttgcggtcgg 3661 gagtacttta atggagagga cgttagtatt gtccgtatcc ggcaaggttt tccgacatca 3721 ctgcaggacg ttgatccagt acaatcggtg gtgtcccttc ggaaccaact cttttggagt 3781 ggttactgga ggacctgccg ctggctagac gataagatcc gggaggtgct acggtacttt 3841 ccggacgtcg aacctggtac tggtatgttg ggcagggaga ccacgcttac ccctcgcggg 3901 gaacgtgatc atccaaacct cttcaagcct cttgtcaagg cttatcatgt tgaggccaaa 3961 cctcctcggg atcatctcga ggggagtggt gcccttctca agtgtttgct caagttggac 4021 acggaccttt ggttaagggg acaagccccc tggggtccac ctgacagttc cgacgaggtt 4081 ccaatctcgc cggacgcctt tcgggagtcg ctacccgaga gttatgagcc gcacttagaa 4141 cgttctggtc gtcccaagtc gactagcata aaacttggat ggggatcacc ccttacggcg 4201 gtggttggac cagcgtaaag cactggccca gagggagagc cgacatggac gtggaccaag 4261 ggttaatacc ccgaggccat gatccgctcc tgtgtgtgta atattcatcg ggcgttgccc 4321 gagcacggga gctggctcca gtcgcgacgc gagttgcggc gggagat //