LOCUS BK013898 3883 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Esthiorhiza.2_28 genomic sequence. ACCESSION BK013898 VERSION BK013898.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Esthiorhiza.2_28 ORGANISM ssRNA phage Esthiorhiza.2_28 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Arctuvirus; Arctuvirus arvivivens. REFERENCE 1 (bases 1 to 3883) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3883) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035151 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3883 /organism="ssRNA phage Esthiorhiza.2_28" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786045" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Arctuvirus; Arctuvirus Esthiorhiza.2_28" gene 88..1464 /gene="Esthiorhiza.2_28_1" CDS 88..1464 /gene="Esthiorhiza.2_28_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51710.1" /translation="MPDVTQERIFPMIRVAGSYTRRIGNGPVLPLPCDDDMLVSGSQS ITGFRSNKTEGLSEDEDPSGGAANSWQLTKKLSSDYHKKEGRYFRGLSSYDTGHEFSS IRGNVIYPTWVKDMYSGWEGYPDFTAYSGILIPYVANPAYPEFRPADASEINALGAKM ISMTIPTKPEASLATAMGEAREGLPSTFSYALREAHQASRGVGSEYLNFVFGWKPLMR DIQSVALAVKSFGAKTRQLQRDSGRHIRRKCALEGRSDFVDRGLAASYVAMPRQHSDY QAEFFEPSMECRVIDITRSDSWFRGAYSYLLAEGHSFFSRMERYEQQANRLLGTRMNA DTIYQVTPWSWLIDWYADVGMFLRNVSALSEDSLVLRYGYVMHEQSATREYSIDNVRA IHGGIPRQYALGVPTRVSMTFQLTSKLRRRATPYGFGLKLESLSPQRWAVLGALGMTQ SPTSLRGH" gene 1532..1891 /gene="Esthiorhiza.2_28_2" CDS 1532..1891 /gene="Esthiorhiza.2_28_2" /codon_start=1 /product="coat protein" /protein_id="DAD51711.1" /translation="MSFADPTVTIGGTAIALPRTSSGSNAGEFTSADGAIKVTVSHSY GKRTRRVLRLSSNKISADPLIPSQNRPTSMSTYIVVDSPVNGYSVAEAKAVVDALVAF LTASSGARVTQLLGGEN" gene 1995..3794 /gene="Esthiorhiza.2_28_3" CDS 1995..3794 /gene="Esthiorhiza.2_28_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51712.1" /translation="MKSLIALLNVLLIELGARCGTSTARDIKTIRERCEHEGLSFLTI TLPAFGKDFEKSLDQGRVDSSLFLGFSRREGLPRFLGGFLSRVFASSSGLLLDDPDID AIRAIRQVTLMFGKIKLPCSPERTQLAFRKYLECEQDVRLADQLLLSEPNRVQEFRRI GRLLWADLFAEMDNTIYHELIVPRHGPGATADKLRGNAKYNNRRWTRRLDEVFPHWEN LIPSESLLQRMDGVTVLEPGEEVPVKVTPVPKTLKTPRLIAEEPTCMQYMQQGILALV VKQIARSDNARNFICFKSQEPNQRLAREGSLRGSLATLDLSEASDRVSNQHVRLLLLN HPNLSRAVDATRSRKADVLGQTIRLAKFASMGSALCFPMEAFVFATVVFLGIQEALSQ PLTTEDIKRLRGSVRVYGDDIIVPTDYVHCVVRELEAFGFRVNTAKSFWTGRFRESCG KEYYAGQDVCLARVRQLLPTSQQQVSEVAATVAFRNQLFELGYSDTVDYLDSLIERVI PFPWVERTSSLLGRYGHYLPSQETRHDPDLQHPLVRGAVISAKSPKSYLDDYGALMKW FLNEGEDPLQKDHLIRAGRPESASIKIRWTRPY" gene 3739..>3883 /gene="Esthiorhiza.2_28_4" CDS 3739..>3883 /gene="Esthiorhiza.2_28_4" /codon_start=1 /transl_except=(pos:3739..3741,aa:Met) /product="hypothetical protein" /protein_id="DAD51713.1" /translation="MLGDPNPLASRFGGPDHTDLGSVSGRMWEEPPPRGSEVLSRALA WEMH" ORIGIN 1 cccacgaggg cccccccagc gttcgcgccg cgaacgtagc tggaattcga aatctccagc 61 cgccgacttc cgtacaaagg acctgtcatg cccgatgtca cacaggaaag gatttttccg 121 atgattagag tggcggggtc ttatacccgc cgcatcggaa atggtcctgt tttaccactc 181 ccgtgtgacg atgacatgtt ggtttccggc tctcagtcta tcactggctt ccgaagtaac 241 aagacggaag gccttagcga agatgaggat ccatcgggag gagctgccaa tagctggcag 301 cttaccaaga agctcagctc agattatcac aagaaggagg gccggtactt tcgcggcctg 361 agctcctacg atactgggca tgagttctcg tcaatcagag gtaacgtcat ttaccctacc 421 tgggtgaagg acatgtactc tggttgggaa ggctatccgg attttacggc gtactcaggg 481 attctaatcc cctacgtcgc aaacccagcc taccccgagt tcagaccggc agacgcgagc 541 gagattaatg cgctcggtgc caaaatgatc tcgatgacga tcccgacaaa gccggaggcg 601 tcacttgcta ctgctatggg agaagcacgg gagggcttgc cctctacgtt ctcctatgcc 661 ctacgcgaag ctcatcaggc cagcagaggt gttggctctg agtacttgaa cttcgtgttc 721 ggttggaaac cccttatgag ggacatccaa tcagtagctc tcgctgttaa atcgtttggc 781 gcgaagacgc gccagctaca gcgggacagc ggaagacata tccgcagaaa gtgcgcgcta 841 gagggtcgta gtgacttcgt ggatcgcggt ctcgctgcca gttacgtggc tatgccacgg 901 cagcattccg attaccaagc ggagttcttc gaaccctcga tggagtgccg agtgattgat 961 attactcgct cggattcctg gtttcgtggt gcctactcgt atctcctggc tgaaggtcat 1021 tctttcttca gccgtatgga gcgctacgag cagcaggcta atcgcctgct cggaacgcgt 1081 atgaacgcgg acaccatcta tcaggttact ccatggtcct ggctgatcga ctggtacgca 1141 gatgtaggca tgttcctacg gaatgtgtct gcgctgtcag aagacagctt ggtgttgagg 1201 tacggttacg tgatgcatga gcaatcagca acgcgtgagt actcaatcga caacgtacgc 1261 gcgatacacg gggggatccc ccgtcaatac gcgttaggcg tgccgacccg cgtctccatg 1321 acgtttcaac ttacgtcaaa gctaaggaga cgcgcaacac cgtacggatt cggccttaaa 1381 cttgagagct tgtcgcctca acgttgggcc gtattaggtg cgctgggtat gacccagtca 1441 cctacaagtc tccgagggca ttaatacgcc tttggagcca gggagcccta cagggatgac 1501 ctgaccgaca acaccagaag tgagtgctgc catgtcgttt gccgatccca ccgttacaat 1561 cggcggaact gctattgcgc ttccgcgcac gagttccgga agcaatgccg gcgagtttac 1621 atctgccgac ggagctatca aggtcaccgt ctcgcattcc tatggaaagc gaactcgacg 1681 ggtcctccga ctgtcctcga acaagatttc tgccgatccg ctgattccta gccagaacag 1741 gcccacttcg atgagtactt acatcgtcgt ggactcgcct gtgaatggct acagcgtggc 1801 agaggctaaa gcggttgtgg acgcccttgt ggcgtttctt accgctagtt cgggggcacg 1861 ggtcacccag cttctgggtg gtgagaactg aacgctctga ccgggccggc tcacgccagt 1921 accggttagg ttctcacatt ggcgacatgc gatgtggctg aggaacgctc accctcacat 1981 cagtaagggg aacgttgaaa agcctgatcg cactcttgaa tgtgctcctg atcgaactag 2041 gagcacggtg cggcacgagc acggctcgcg atatcaaaac aattcgcgag cgttgcgaac 2101 acgaggggtt gtcattcttg acgataaccc tccctgcctt tggtaaggac ttcgaaaaaa 2161 gtctcgacca ggggcgggtg gactccagtc tcttccttgg attttcaaga agagaagggc 2221 tcccccgatt tctcggaggt ttcctgagcc gtgtgttcgc ctcaagcagt ggtttactgc 2281 tcgatgatcc ggatattgac gccattcgcg ccattcgtca ggtaactctg atgttcggca 2341 agataaaact gccatgctca ccagagcgga cgcagctggc attccggaaa tacctcgagt 2401 gtgagcagga cgtacgcctg gctgaccaat tactcctctc ggaaccgaac cgagtccaag 2461 aattccggag aattggtcga ttgctctggg ctgatctgtt cgcggagatg gataacacta 2521 tctaccacga gcttatcgtt ccaaggcatg gaccaggcgc caccgctgat aaacttcgcg 2581 gcaacgcgaa gtacaataat cggcggtgga cgcgtagatt ggacgaggtc ttccctcatt 2641 gggagaacct tatcccatct gagtccctcc tgcaaaggat ggacggcgtt actgtcctcg 2701 aacctggcga ggaggtacct gtcaaggtca ctcctgtgcc taaaacgctg aagaccccac 2761 gactcattgc cgaggaaccc acttgtatgc agtacatgca acaggggatt ctcgcgttgg 2821 tcgtgaagca gatcgcgcgc tctgacaacg cgcgcaactt catctgcttt aaatcgcaag 2881 agccaaacca acggctcgcg cgtgagggct cccttcgggg gtctctcgcc acactggatc 2941 tcagtgaggc ttcggatcgg gtctccaatc agcatgtacg gctcctcctg ctaaaccacc 3001 caaatctttc tagggcggtg gacgctacaa gaagccggaa ggctgatgta cttggacaga 3061 cgattcgtct ggccaagttc gcgtcgatgg gttcagcgct ctgtttccct atggaggcgt 3121 ttgtattcgc caccgttgta tttctgggga tccaggaagc gctcagtcaa ccactcacca 3181 cggaggacat taaacgtctc cgcggttcag tgcgcgttta tggggatgac attattgtcc 3241 ccacagacta cgtgcattgc gtcgttcggg agctcgaagc ttttgggttt cgagtcaaca 3301 ccgcaaaatc tttctggacc ggaaggttca gggagtcatg cggtaaggag tactacgctg 3361 gccaggatgt ttgtctggct cgtgtgcgtc aacttctccc gacttcgcaa cagcaggtat 3421 cagaggtggc tgccacggta gcttttcgca accagctttt tgagctgggc tacagcgata 3481 ccgtcgacta tcttgactca ttaatcgaga gggtgatccc ctttccttgg gttgagagaa 3541 cgtcgtctct gctgggtcgt tatggccact atctccctag ccaggagaca cgccatgatc 3601 ctgatttgca gcaccccctt gtcaggggag ctgtaatcag tgccaagtcg ccgaaatcgt 3661 atctcgacga ctatggggcc ttgatgaagt ggttcttgaa cgagggagaa gacccccttc 3721 aaaaggatca ccttatacgt gctgggcgac ccgaatccgc tagcatcaag attcggtgga 3781 cccgaccata ctgatctagg atcagtgtcg gggcggatgt gggaagaacc ccctccgcgc 3841 gggagcgagg tgctctctcg agccctcgct tgggagatgc act //