LOCUS BK013796 4204 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Esthiorhiza.2_41 genomic sequence. ACCESSION BK013796 VERSION BK013796.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Esthiorhiza.2_41 ORGANISM ssRNA phage Esthiorhiza.2_41 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus neohumadaptatum. REFERENCE 1 (bases 1 to 4204) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4204) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN033900 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4204 /organism="ssRNA phage Esthiorhiza.2_41" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786060" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Esthiorhiza.2_41" gene <1..1202 /gene="Esthiorhiza.2_41_1" CDS <1..1202 /gene="Esthiorhiza.2_41_1" /codon_start=3 /product="maturation protein" /protein_id="DAD51357.1" /translation="FSPPWFQGTQETESESHPEWRSYSARSSGDVGGNFFSQKRYVNV SDVQVHRVTSGWRRYDSSSVYRGTYKGPLTVTDAFTPGTMPFPSYNRSSDAALNAYGA AAVAKCAPTKPTADLATALLETFHDGLPKLLGKHLWSARVQDVRGQVKSPGSEYLNYQ FGWKPLVSDILDFVKTVRNMDRLIQQYVRDSQRVVRRRYSFPPEASVTESVTRNQAFP SGRGLGGDMINFDVTRQAQVVRRRETSVRRWFSGAFVYHLPQTFLQDVYTPFADDWQV ARRLLGLDLTIETLWELAPWSWAVDWFTNVGDVLYNADAWASEGLVMRYGYIMEHSIV RDTYSYVGPTYIYGSSYEGRPSSVTLVSETKVRRQANPFGFGLTMGALSGTQKSILAA VGLTRLK" gene 1267..1635 /gene="Esthiorhiza.2_41_2" CDS 1267..1635 /gene="Esthiorhiza.2_41_2" /codon_start=1 /product="coat protein" /protein_id="DAD51358.1" /translation="MALADPQTITINAVTTPLPRTFSEGNESAYVSADGLWKLSVNHN LIKQGRVRHLLRFDHSKVTSDPFKPSENVKVGSAIYLVVDVPPAGYTNTELMQIYQGY KALMTAASDAIITKLLGGES" gene 1598..1798 /gene="Esthiorhiza.2_41_3" CDS 1598..1798 /gene="Esthiorhiza.2_41_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51359.1" /translation="MRSSPNFLAVNRREVDGQLPEREVVRRRRDEISLGDLEITLKVS YKTLALVFLIFNVLSHIIDSLL" gene 2266..4164 /gene="Esthiorhiza.2_41_4" CDS 2266..4164 /gene="Esthiorhiza.2_41_4" /codon_start=1 /transl_except=(pos:2266..2268,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD51360.1" /translation="MKSLMSLWSQVAEESATICCTSASRDIKTVAARVEHEGLSFLTI TLPDYGKAIQKWLDQGQVAFHPVSTCERGRGLPRFLGGFLGRVFDLYSGKLLDDPCTD SIRALRQLTLQFGKMELACSPARQAKSVRNYVECEKEVRLFDKELSKSDLRKFVRMSN MLFRGVFTKVDRDIYLGRYVPKHGPGSTADKLSGNRKFSQQTWTERLERSGFHAGESL LPNWRYYRQLENVDFLEPGAEVPVKVTLVPKTLRTPRVIAMEPTCMQYMQQAVLKVLL AHLGRDDFLSRVIGFDDQVPNQELARSGSIDDRTATLDLSDASDRVSNQLVRAMLSQW PHLSGVVDASRSRRAELPDGRKVRLAKFASMGSALCFPFEAMVFTTLIFLGIQEALNR PLSRKDLKAFAGTVRIFGDDLIVPKEFVHTVVNLLEHFGARVGADKSFWTGKFRESCG REYFNGTDVSIVRFRQAFPTRRQDVSEVQSLVSFRNRLYMSGYWKTCDWLDGKIGKLL THFPTVRPTSSVLGRVSFLTERHNAFSDHRVCPRLHVPLVRGYVVKAKPPRDNLDGTG ALLKCLLKSDDGSLRMKNSCYLPDTPETNHLWNPSVEQSPMVSGKHLERSGRPKSSAM ILGWRSPL" ORIGIN 1 cattttcacc gccttggttt caggggactc aggaaactga gtccgaaagc catccggagt 61 ggcgctcata ttctgcgcgt tcttccggag acgttggtgg gaacttcttt tcccaaaaac 121 gttacgttaa tgtatctgat gttcaggtac atcgcgtgac gtcgggatgg aggcgatacg 181 attcgtcttc ggtttatcgg ggtacctata aaggtcccct taccgtgacg gacgcattca 241 caccgggcac gatgccgttc ccaagctata accgtagcag tgatgctgcg cttaatgcct 301 atggagcggc agctgttgcc aagtgtgctc ccaccaagcc taccgccgat ctagcaacag 361 cgttgctaga aaccttccat gatggacttc ccaaacttct tgggaagcac ctctggtcag 421 ctagggtaca ggatgtccgg ggacaggtta agtctccggg ctccgaatac ctgaactacc 481 agtttggttg gaaaccgctc gttagcgata ttcttgactt cgttaagaca gtcaggaaca 541 tggacagact aatacaacag tatgtccgtg atagccaacg agtagttcgg cgtaggtata 601 gctttccacc agaagcgtca gtaacggagt cggtcactcg aaaccaggcc ttcccttcgg 661 ggagaggcct tggtggcgat atgattaact tcgatgtgac gcggcaagcg caagtggtcc 721 ggcgtcgtga gacgtccgtg cgtcgatggt tttcaggagc gttcgtgtat cacctcccgc 781 agacttttct gcaggatgtg tataccccgt tcgccgatga ttggcaggtt gccaggcgat 841 tgcttggctt ggacctgacc atcgaaacac tttgggaact tgcgccttgg agctgggctg 901 tcgactggtt taccaatgtc ggcgatgttc tatacaacgc cgatgcttgg gccagcgagg 961 gtcttgttat gcgatacggg tatatcatgg aacattcaat tgtccgtgat acttactcgt 1021 atgtcggtcc cacgtatatc tacggaagta gctacgaggg ccggccgtca tccgttacct 1081 tggtttctga aactaaggtg cggagacaag caaacccatt cgggttcgga ctaaccatgg 1141 gtgccctatc gggcactcaa aagtccatcc ttgcggcagt cggtttgacc cggctgaagt 1201 aaggagatag actggctcgt caaacgccag acggggctca agacctgagc cctaggagtg 1261 atgcctatgg cactagccga tcctcagacc atcacgatca atgcggtgac cacgccccta 1321 ccgagaactt tctcggaggg aaacgagtca gcgtatgtga gcgctgatgg cctatggaag 1381 ctgtcggtca accacaacct gataaaacag ggaagggtcc ggcatcttct gaggttcgac 1441 cactcgaagg tcacttcgga tccgtttaag ccttcggaaa acgtgaaggt cggttcggcg 1501 atttatctcg tcgtcgacgt tccgcccgcg ggctacacga atacggagct aatgcagatc 1561 tatcagggct acaaggcctt gatgaccgcg gcctccgatg cgatcatcac caaacttctt 1621 ggcggtgaat cgtagagagg tcgacggcca gcttcccgaa agggaggttg tccgccggcg 1681 tcgtgatgag atcagccttg gagatcttga gattacactc aaggtgagct ataaaacgct 1741 tgccctggtg tttctcatct tcaatgtgct gagtcatatc atcgactcgc ttctctaaga 1801 cccagatcca atattgtaat gggctgaaat gactgccctt ttggatctgg accaccttat 1861 tgagcgggtg actgagcttc ggctcactct agtggtagta tgtagttacc ctaccacaac 1921 gatcagggag ctttccctga gttaggatgt aacattgtca cacccgagtt caggggagta 1981 cgctcccttg catctccggg ctgcccttca cgttactcgc ttggctaatg ccaattgggt 2041 gcgaaagggt aacacgggta tgcggtacat cgtcgatgcg cctatccatg aggccctgcc 2101 tcccgaagtg actctcggga ttaaggacgt agtggatggg tcaacgttga cggtgtatga 2161 cctgttgggt aggctaccaa cagacctgca aaagcaggtg tgctggacat actgccggtt 2221 gacataggct acggatctgt ttaccttctc atgagaggag ggacagtgaa aagcctaatg 2281 tcactctggt cccaggtagc cgaggaatcg gctactattt gttgcactag cgccagtcgc 2341 gacattaaaa cggtcgcggc tcgtgtcgaa catgaggggt tgtcgtttct aacgataacc 2401 ctacccgatt atggaaaagc tatccaaaaa tggcttgacc agggtcaggt ggccttccat 2461 cccgtgtcca cttgtgaacg cgggagaggt ctcccccgat ttctcggagg tttcctcggc 2521 cgtgtgttcg acctgtacag cggaaagttg ctcgacgatc cctgtacgga ttccattcga 2581 gccttgcggc agctaacgct gcagtttggc aagatggagc ttgcgtgctc tccagcacgt 2641 caagcaaaat ccgttaggaa ttacgtcgag tgtgagaagg aagtccgttt gtttgacaaa 2701 gagctttcta agagtgatct tagaaagttc gttcgtatgt caaatatgct gtttaggggc 2761 gtatttacta aggtggatag agatatctac cttggacggt acgttcccaa gcacggtcct 2821 ggatcaactg ctgataagct ttctggaaac agaaagttca gtcagcaaac ctggaccgaa 2881 cgtctcgaga gatccggttt tcatgccggc gagagtcttc tccctaattg gcggtattac 2941 cgccagttgg agaatgtcga cttcctcgaa cctggcgcgg aggtgcctgt aaaggttacc 3001 ctcgtgccta aaacgcttcg gactccgcga gtcattgcca tggaacctac ctgcatgcag 3061 tatatgcagc aggcggttct taaggtactg ctcgcgcacc tcggtaggga tgacttccta 3121 tcgagggtta tcggtttcga cgaccaagtt cctaatcagg aacttgctcg tagcggttcg 3181 attgatgacc gaactgctac actcgatttg agtgacgctt ccgatagagt ttcgaatcag 3241 ctcgtcagag cgatgctctc tcaatggccc cacttgtcag gggttgttga tgcatctcgc 3301 tctaggcggg cagaacttcc tgacggacgt aaagtccgtc ttgcgaagtt tgcgtctatg 3361 ggttcagcgc tctgtttccc ctttgaagca atggttttta cgacattgat cttcttgggg 3421 attcaggagg cgctcaacag accgctttcc cgcaaggacc ttaaggcctt tgcgggtacg 3481 gtgcgtatct ttggggacga cttgattgtc cccaaggagt tcgtgcatac cgtcgtcaac 3541 ttgctcgagc atttcggtgc tcgggtaggg gctgacaagt ctttctggac tggaaagttc 3601 agagagtctt gtggtcggga gtactttaat ggaacggatg ttagtattgt ccgtttccgg 3661 caagcgtttc cgacacgacg gcaggatgtt tctgaggtac agtcgctcgt ctctttccgg 3721 aatcgactct atatgagcgg ttactggaag acgtgcgatt ggctggatgg aaaaattggg 3781 aagctattga cacacttccc aactgtccgg ccaacatcct cagtgctggg cagggtaagc 3841 ttcctgactg agaggcataa tgctttctca gatcatcgag tttgcccacg ccttcatgtc 3901 ccccttgtca ggggatatgt agtgaaggcc aaacccccga gggataacct tgatgggact 3961 ggtgccctgc ttaagtgttt gcttaagtca gatgatggta gtttaaggat gaaaaactcc 4021 tgctatctac ctgacactcc agagactaat cacctctgga acccatcggt agagcaatct 4081 ccgatggtat ctggcaaaca tttggaacgt tctggacgtc ccaagtcgtc tgcaatgata 4141 cttgggtgga gatcgcccct ctaggggagc ggtcgggaca actttaccag ttgccctgag 4201 ggag //