LOCUS BK013884 4260 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Esthiorhiza.2_8 genomic sequence. ACCESSION BK013884 VERSION BK013884.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Esthiorhiza.2_8 ORGANISM ssRNA phage Esthiorhiza.2_8 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus neohumihabitans. REFERENCE 1 (bases 1 to 4260) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4260) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035330 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4260 /organism="ssRNA phage Esthiorhiza.2_8" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786075" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Esthiorhiza.2_8" gene 126..1442 /gene="Esthiorhiza.2_8_1" CDS 126..1442 /gene="Esthiorhiza.2_8_1" /codon_start=1 /transl_except=(pos:126..128,aa:Met) /product="maturation protein" /protein_id="DAD51657.1" /translation="MATTRKRVIPYEGPRSSIKTDIQTIPGQPTRYAVSRNGPLSAFT NLDGSQVTVSESHPQWRRRRKFAFPSDVGGEFSTKLRYVTGGNPGPVTIYGSFGKEPD QSEASSRYLGPFLPMSPSDFQYPPYADSSDSDLISLGTSAIRLASPSKPAADVTTFVG ELFQDLPQMLGHSFREIGRVSPKSVAKAMAGEHLNVQFGWLPFVNDVEKLISAMRHAD AIIKQYDRDSMKAVRRGWKFKPEISSDIIPFTASGVGPWTAQYSSSWYSPIKDPLGQV MRESKTTRTRWFSGSFVYYVPPLPKNRYTTDYIARQIILAKKVGGARLTPDAVWNLLP WSWLTDWFANTGDLLENISNTIVDNQVLLYGYMMEHTVSSYTYTLVGPYFNRKGTPGP PPPSVTLVSETKRRIKATPYGFGLTFDGLSITQKAILASLGVTHSK" gene 1499..1861 /gene="Esthiorhiza.2_8_2" CDS 1499..1861 /gene="Esthiorhiza.2_8_2" /codon_start=1 /product="coat protein" /protein_id="DAD51658.1" /translation="MSFTDPLSLTVSSVTTPLPRTFAEGSETHYSSADGLIVVSASHD VGKRTRRLLRVDYSKLSPDAFKPDENVKRSMSLYMVFDIPADGFTNAEVLAVYQGYKA MITATSDQMVTKLLGGES" gene 1901..2110 /gene="Esthiorhiza.2_8_3" CDS 1901..2110 /gene="Esthiorhiza.2_8_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51659.1" /translation="MPDDERDAHKGVSPLHRRLGRRHTVYGRRTTDVPQVTLGKKLLV ILLAVVNVAYLAGDVILSTLNNCGH" gene 2073..2306 /gene="Esthiorhiza.2_8_4" CDS 2073..2306 /gene="Esthiorhiza.2_8_4" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51660.1" /translation="MSSCPHLITVGIDEVNGIYFDVSVSDRPDGRSVQMHLFYGKAEE LSPAEYILLRNFLIQANNLFKISSQDKIDPASM" gene 2344..4233 /gene="Esthiorhiza.2_8_5" CDS 2344..4233 /gene="Esthiorhiza.2_8_5" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51661.1" /translation="MKSLMSLWSMTANELAVRCCTSAILDIRTVENRVEHEGLSFLAI SLANFGKATEKWLDQGFVVPSDVPSFRKDRLTGLPVFLRGFLGRVFDTSSGVLLVEPD VEAIAAIRQLTLMFSKIALPQDGPSGRSTRVVTPRRERRAMSGFIQCEKDIKRTDSLL DPQYLTDFKRVSDLLFGDLFAKLDRDVHWQRLAPKHGPGAVADRLSSNAKYRMRTWTS RLQQVMPAEDYLIPNHHFRDDLNEELNVLEPGAELPVRVVTVPKTLKTPRIIAIEPAA MQYAQQGLLHCLLSAVKEDDFLSRIIGFDDQEPNRRMAMEGSLSGDLATLDLSEASDR VSYQHVRAMVEDYPDLLRMVDACRSRKADVPGHGVIRLAKYASMGSALCFPFEAMVFT TLIFLGIERELSTQLNRRKLLKLAGKVRVFGDDLIVPRDYVLSVVGELHLFGYVVNAS KSFWTGRFRESCGKEYYDGHDVSIVKVRQVLPTRRTDASGVISAFSLRNQLYWAGLWK SAAWMDDYLGRVVKYVPNVAPSSPLLGRESVLGYEYQGLHPNYHSPLVKGYYVVSKPP LDHLDGVGALHKCLLDSDYVGFGLKARVYNPYPVDVANVDEGHLERSGRPEHVSIKLG RRSPF" ORIGIN 1 ccttacgggg ccccgcgcat agttcagcat cttacacacc taacagttta taactgcagg 61 tgtgtatctg agagaattaa ctctcagaag accagaagct ctgcttcgtg aagggaggtt 121 tatgcgtggc taccacccgt aaaagggtga taccatatga aggacctcgg tcctccataa 181 agacagatat ccagacgatt cccggccaac ctactcggta tgccgtgtct cgtaatggac 241 cactgtctgc atttaccaac cttgacggtt cacaggtgac tgtgtccgag tcccatccac 301 aatggagacg caggcgtaag tttgcgtttc ctagcgatgt tggtggcgaa ttttccacaa 361 aattgcgata tgtgaccggg ggaaaccctg gtcctgtcac gatttatgga tctttcggga 421 aagagccgga ccaatcagaa gcgagttctc gctatctggg tccctttctt ccaatgtcgc 481 catcggattt ccaataccct ccgtatgcag attcgagtga ttcggatctg atatcgttgg 541 gtacttcggc tatccgtttg gcttcaccat caaagcccgc tgccgatgtc actacattcg 601 ttggggaact ttttcaagat ctccctcaga tgctgggaca ttccttccga gagatcggta 661 gggtttctcc taaatccgtc gcgaaagcga tggctggaga acacctgaac gttcaattcg 721 gttggctacc ttttgtgaac gatgtcgaga aacttatctc ggcaatgcgt cacgcggatg 781 cgatcataaa acaatatgat cgcgattcca tgaaggctgt tcggcgtgga tggaagttca 841 agccggaaat ttcttcggat atcatacctt ttactgctag cggcgttggt ccttggaccg 901 cgcagtatag cagttcttgg tatagtccga ttaaagatcc gctgggtcag gttatgcgcg 961 aatcgaaaac gactcgcaca aggtggttta gtggatcttt cgtgtattat gtgccgccgt 1021 tgccgaagaa tcggtatacg acggattaca tagcacgtca gatcatcctc gccaagaaag 1081 ttggcggggc tagactgacc ccagacgctg tctggaactt gctcccatgg agctggttga 1141 ccgactggtt cgcgaatact ggtgatctcc tagagaacat cagtaacacg atagtcgaca 1201 accaggtgtt gttgtatgga tatatgatgg aacatactgt ctcatcgtat acctacacgt 1261 tggtcggacc ctatttcaac agaaaaggga ctcccggccc accgcctcct tccgttactt 1321 tggtttctga aaccaagcga cggataaagg caacaccata tggttttggc ttgacgtttg 1381 atggactttc catcacacag aaggccatcc tcgcctcgct tggggttacc cactcgaagt 1441 gaggaagctg ttgtgctatg caacgtcaat gggagcttag ctcctaggag tgatgcctat 1501 gtcgttcacc gaccctcttt cgctcaccgt ttcgagcgtg actacgcccc ttccgcgaac 1561 tttcgcggag ggaagcgaaa ctcactactc gagcgctgac gggcttatcg tcgtttccgc 1621 ttcccacgat gtgggaaagc gtacgcggcg actgcttcgg gtcgactact cgaagttgag 1681 ccccgacgcg tttaagcctg acgagaatgt gaagaggtcc atgtctttgt acatggtctt 1741 cgacattccc gccgatggct ttaccaacgc ggaggtgctt gcggtgtatc agggctacaa 1801 agccatgatc actgcgactt cggaccagat ggttacgaaa ttgctgggtg gcgagtctta 1861 gactcgtcca gcaactagta aaccttccct ggtcgtctgg atgcctgatg atgagagaga 1921 cgcccataag ggtgtttcgc ctcttcacag acgccttggt cgtagacata ctgtctacgg 1981 ccggcgtacc actgacgtgc ctcaggtgac cttgggcaaa aagctcttgg tcattctttt 2041 ggcagtcgtc aatgtcgcat acctggcagg agatgtcatc ttgtccacac ttaataactg 2101 tgggcattga tgaagtgaac gggatctatt ttgatgtctc tgtttcggat cggcctgacg 2161 gtcggtccgt acagatgcat ctgttctacg ggaaagctga agagctctct cccgcagaat 2221 atatcctttt gaggaacttt cttatccagg ctaataacct gtttaagatt tcttctcagg 2281 ataagataga cccggcatcg atgtaggcta tggattagcc accttctcaa gagaggaggg 2341 actatgaaaa gcctgatgtc actctggtcc atgacagcca atgaattggc tgtcagatgc 2401 tgcactagcg ccattctcga cataagaact gtcgagaatc gtgtcgagca cgaagggcta 2461 tcgtttcttg cgatatccct ggcgaacttt ggaaaagcta ccgaaaagtg gcttgaccaa 2521 ggtttcgtcg tcccttcgga cgttccttct tttaggaagg atcgtcttac tggtctcccc 2581 gtatttctac gaggtttcct tggacgtgtg ttcgacacta gtagcggtgt gctgctggtt 2641 gaacctgacg ttgaagcaat cgctgctatt cgtcaactta cgttgatgtt tagcaagatc 2701 gctctccctc aggacggtcc ttccggacgg tccacgcggg ttgttacacc gcgtcgtgag 2761 agacgtgcaa tgtctgggtt tatccagtgt gagaaggaca taaagagaac cgattctttg 2821 cttgatcctc agtatcttac tgatttcaag cgggtctcgg acttgctttt cggcgatctc 2881 tttgctaaat tggacagaga tgtccactgg caaagactcg ctccgaagca tggtccaggc 2941 gctgtcgctg atcgacttag cagcaatgct aagtacagga tgcggacctg gacttctcgt 3001 ctccagcagg taatgcctgc ggaggactac ctcattccta atcatcactt tcgtgatgac 3061 ctgaatgagg agcttaatgt cctcgaacct ggcgccgaac ttcccgttag ggttgttacg 3121 gtgccaaaga cgttgaaaac cccacggatc attgcaattg aacctgctgc gatgcaatat 3181 gcgcagcaag gtcttttgca ctgtctcctt agtgcggtta aagaggatga cttcctctcc 3241 cgcattatcg gattcgatga ccaagagcct aacaggcgaa tggccatgga gggatcactc 3301 agcggtgatc tcgccacgct tgatctaagc gaggcttccg atagggtttc ctatcagcat 3361 gtacgggcga tggtcgaaga ctatcctgat ttgctcagga tggttgacgc ctgtcgttcc 3421 cggaaggctg acgtacctgg tcatggcgtt attcgcctag ccaagtacgc gtctatgggt 3481 tcagctctat gctttccctt tgaggccatg gtatttacta ccttgatctt cttggggatt 3541 gaacgagagc tcagcacgca gcttaaccgg cgaaagcttt tgaagcttgc cggaaaggtg 3601 cgcgtctttg gtgacgattt gatcgtcccc agagactatg tgctatccgt cgttggcgaa 3661 ctacaccttt tcgggtatgt agtcaatgcc agcaagtcct tctggaccgg aaggttcaga 3721 gagtcctgcg gtaaggaata ctatgacggc catgacgttt ctattgtcaa ggtgcgccag 3781 gtacttccta cacgacggac agatgctagc ggagttatat cagcgttctc tctcaggaat 3841 cagctctatt gggctggtct ctggaagtcc gctgcttgga tggatgacta tcttggtcgc 3901 gttgttaaat acgttcccaa tgtagcacca tcgtctccgc tgcttggcag ggagtcggtc 3961 cttggatacg aatatcaagg acttcaccct aattaccact cccctctagt caaggggtat 4021 tatgtggtat ccaagccccc tctagatcat ctagatgggg taggtgcctt gcacaagtgt 4081 ctattggatt cggattatgt aggttttggc ctaaaggcca gggtctacaa tccgtatccc 4141 gtcgacgttg cgaacgttga tgaagggcac ttggagcgtt ctggacgccc cgagcacgtc 4201 agcatcaagc tcggaaggag gtcgcccttt tagggcggcc gtggcttaga aaccacgcag //