LOCUS BK013855 3685 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Esthiorhiza.3_4 genomic sequence, sequence. ACCESSION BK013855 VERSION BK013855.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Esthiorhiza.3_4 ORGANISM ssRNA phage Esthiorhiza.3_4 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Lobdovirus; Lobdovirus chorovicinum. REFERENCE 1 (bases 1 to 3685) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3685) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034002 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3685 /organism="ssRNA phage Esthiorhiza.3_4" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786083" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Lobdovirus; Lobdovirus Esthiorhiza.3_4" gene 92..1333 /gene="Esthiorhiza.3_4_1" CDS 92..1333 /gene="Esthiorhiza.3_4_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51563.1" /translation="MPTKVKVKYQTGVIHEYYSDSRNPSVVVDTYSLFSRNISGQFTG VSNPGWRMQVKRRINATTNASWYYRELEEDFKLGLHADLYYFDGGTSSWKHWAEWDQK LTGPLLKRPPVPDTFPSDSTADASARLNFLGKIRDLQSAFMTGTFVGELAETIRMIRR PAQSLRHGIDQYVQTARKVARRTSGLGRSKALTGTWLEYQYGWRPLISDIQQASEALA SQGRKIKLEFVKAHGSADSSSFVNGSEVVFGRGVDYSFTRKAKTSVRYMAGVSMFSDQ PVPTMSHWGLDGFSFFPTVWNLIPYSFLVDYFSNIGKIIDAVCVQNFIIDWGCKTIFR EAEETCSSFKQPDLGQYTTNDFRPHDTGTSVQTYKNRVVSGDRVSVMAVEADIRDIRL NIPGSGTKWLNIAALARQRMV" gene 1372..1839 /gene="Esthiorhiza.3_4_2" CDS 1372..1839 /gene="Esthiorhiza.3_4_2" /codon_start=1 /product="coat protein" /protein_id="DAD51564.1" /translation="MTINVTSPVTGTAQTGLTSPTYTLTADTPPNAQSKQWAVTALGG TQTGVDVHGASKPFTLTVSKPANIRIAPIPNPSTGVIGNSPRNVYTVMVRKGVLPLAG QSPQVSVLRVDFSVVAGSDMADAEDVRAAVSLLIGALSQQSAGIGDTLVSAII" gene 1997..>3685 /gene="Esthiorhiza.3_4_3" CDS 1997..>3685 /gene="Esthiorhiza.3_4_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51565.1" /translation="MDVSSSALLGYLHEDLREVNPDMAFDGPDMDYFPGATVLDVLCL RLHSSLLKKLSDEVKVDADERCLEKFLAANIRCREWRLDCESVWDDILVGTFKQSLES LSYPRGEFMVNSYFDLLDRGRCGPGASLGANGVDFYTKLFSSKLTATSSWLYNVYNEY ICWFAKWRNGEFDRLIAFGLPQYTLCSNLSFVRKTRDISRSICTEPTLNMFFQLGLGE IIGFELNRSFGIDLSSQPERNKSLAQRGSVDGSLATIDLESASDSVSLNMLESFLPDY LKEIIWQIRTPRTRIYGVETTLHMASTMGNGFTFPLQTAIFACIVSAAAKCRGIPLTR CDVPNANWGVFGDDIICPTEVVPDVFRLLKLLGFVVNSTKSYVSGPFRESCGADFYKG VNVRGVYAKSLLTPQSRYVLINLLNEWSTRSNILLKRTVGYLVDSVKVLAIPPWENVD SGIRTPVPLGRCWHRGKQRYLYRCFYPHQPVLLVTEDSITSSQRSRKRAKRRIFSPDG LWFSFLGGYIRNGQIPLSLKQGERPVYRMRRKVSPFWGPSSEQLSSADSWTYWER" ORIGIN 1 catggtctcc ctctctcgag ggtttctgtg gttggtcttg cctttcggtt tagacctcat 61 ctcttacgct gtccgacttt ccaggacctt tatgcctacc aaagttaaag ttaaatatca 121 aacaggggtt atccacgagt actattctga cagccgtaat ccatctgtcg tcgttgatac 181 ctactctctt ttttctcgga atatttcagg ccagtttact ggcgtgagta acccgggatg 241 gagaatgcag gttaagcggc gtataaatgc tacgactaat gccagttggt attatcgaga 301 acttgaagaa gacttcaagt tgggtctcca tgctgatctt tactatttcg atggtggcac 361 gagttcttgg aaacattggg cggaatggga tcagaaactt acagggccac ttttaaagcg 421 gccccctgtt cctgacacct ttccctcaga cagtacagcg gatgcctctg cacgcctaaa 481 ttttctcggt aagatccgtg acttacaatc ggcctttatg accggtacgt tcgtcgggga 541 acttgctgag actattagga tgattcgccg acctgctcaa tccttacgac acggcatcga 601 ccagtacgta cagacggcta ggaaagtcgc ccgacgcact agtggactgg ggagaagtaa 661 ggcattgact ggcacctggc ttgaatacca gtatggatgg cgacctctta tttcggatat 721 ccaacaagcg tctgaagctt tagcaagtca agggcgtaag atcaaacttg agtttgtcaa 781 agcccatggc tctgctgatt cttcttcgtt tgttaatggt tccgaggtag tttttggtcg 841 cggagttgac tactccttta cgcgtaaagc gaaaacttcc gtgcggtaca tggccggagt 901 gagtatgttt agtgatcaac ccgtacctac gatgagtcac tggggccttg atggcttcag 961 tttctttcct acggtttgga atttgatccc atactcgttt ctggtcgatt atttttccaa 1021 tattgggaag attatcgacg ctgtctgtgt ccaaaacttt attatcgatt ggggttgtaa 1081 gactattttc cgggaagctg aagaaacttg tagttccttc aagcaaccgg atcttggtca 1141 gtacactaca aacgatttta gaccacatga tacaggcact tccgtgcaga cctataagaa 1201 ccgtgttgtg tcaggggatc gggtttctgt tatggctgtt gaagcggata tccgcgacat 1261 acgccttaac atacccggtt ctggtacaaa gtggctaaac atagccgctc tggcccgaca 1321 acgcatggtt taacttaaat ctcgtccttt atccttcaca atggaagtct gatgactatc 1381 aacgtcacct cgcctgtcac tggcacagcc caaacaggcc tcacctcgcc gacgtatacg 1441 cttactgcgg atacgccgcc aaatgcacag tcgaagcagt gggctgttac cgctcttggc 1501 ggtactcaga ccggtgtgga tgtgcatggt gcatccaagc ctttcacctt gacggtgtcg 1561 aagccggcca atattcgtat tgcgccgatt ccgaatccgt cgactggggt gattggcaac 1621 tctcctcgga acgtctatac ggtaatggtt cgtaagggtg ttcttcccct tgctggccag 1681 tccccgcagg tatcagtcct tcgtgtcgac ttttcggtcg tcgctggttc tgatatggcg 1741 gatgccgaag acgttcgggc agctgttagc ctccttattg gagcgctgtc tcagcagtct 1801 gctgggattg gcgacaccct tgtctcggcg attatctaac cggcctcgtc ggccgggtag 1861 atcgtcgaag agtctcgggt tgtgcgttgt cctcttgctc tgttgtctag cttatctttt 1921 tggcgatgtg aaactcgctt tagagatttt gtctagcttc atctagagga ctttcagctt 1981 ctctttagga gagtctatgg atgtttcatc ctctgctctt ttgggctact tacatgaaga 2041 cctcagagag gttaacccag atatggcctt tgatgggcca gacatggatt actttcctgg 2101 tgcaaccgtt cttgacgttc tttgtctacg tcttcattcc tctttgctca agaaattaag 2161 cgacgaggtt aaagttgacg cggatgaaag gtgcctcgaa aagttcctag cagctaatat 2221 tagatgccgg gaatggcggt tagattgcga gtcagtgtgg gatgatatac tcgtcgggac 2281 tttcaaacag tctctcgagt ctctatcata ccctcgcggc gagttcatgg tcaactctta 2341 cttcgatctt cttgatcgag gtaggtgcgg gccaggtgca agccttggtg cgaacggggt 2401 cgacttctat acgaagttgt tctcgtccaa attgactgca acgtcttcat ggttgtacaa 2461 tgtgtacaac gagtatatct gttggtttgc caagtggcgc aacggcgaat tcgatcgcct 2521 tattgcgttt ggactacctc agtataccct ttgtagtaac ttgtcatttg tgcgaaagac 2581 gcgcgatata tctcgttcca tctgtactga acctacactg aatatgtttt ttcagcttgg 2641 gctcggggag attataggct ttgaactcaa tcgatccttc gggatcgatt taagttctca 2701 gcctgaacgg aacaagagtc tcgctcagag agggtccgtt gacggtagtc tcgcgactat 2761 cgacctcgaa tccgcctctg actccgtaag tttgaatatg cttgagagtt ttctaccgga 2821 ttatctgaag gagataattt ggcagattcg aactccgcgt actcggattt acggggtaga 2881 gacgacgcta catatggcat ctactatggg gaatggtttt acctttccgc tgcagacagc 2941 tatatttgcg tgtatcgtta gtgcggccgc caagtgtagg ggtattcccc ttacgcgttg 3001 cgacgttccc aatgcaaact ggggagtttt cggtgatgat atcatctgtc ccacggaagt 3061 ggtgccagat gtttttcgtc tccttaaact ccttggtttt gttgtgaaca gcactaagtc 3121 ctacgtaagt ggaccgttcc gtgagagttg cggtgctgac ttctacaaag gagtcaacgt 3181 tcgaggagtg tacgcaaagt cacttctcac gccacaatca cggtatgtac tcattaacct 3241 cctaaacgaa tggtcgactc gctctaacat tctgttaaag cgaaccgtcg ggtacctcgt 3301 tgactcggta aaggtattgg caatacctcc atgggaaaac gtcgactcgg gtatacgaac 3361 cccggttcct ttaggtcggt gctggcatcg tgggaagcaa cgatatttat atcgttgttt 3421 ttacccacac caacccgtcc tattagtaac cgaggatagt attacgtcgt ctcaacgctc 3481 tcgcaagagg gcaaagaggc ggatcttcag tccagatgga ctgtggttct cgtttttagg 3541 tgggtacata cgaaatggac agatcccact ctcccttaaa caaggagagc ggcctgtcta 3601 tcgcatgagg aggaaggtat cgcccttttg gggcccttct tccgaacagc tgtcttccgc 3661 agacagttgg acctattggg agcgg //