LOCUS BK013956 4668 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Esthiorhiza.3_5 genomic sequence. ACCESSION BK013956 VERSION BK013956.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Esthiorhiza.3_5 ORGANISM ssRNA phage Esthiorhiza.3_5 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus neoagrenecus. REFERENCE 1 (bases 1 to 4668) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4668) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034950 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4668 /organism="ssRNA phage Esthiorhiza.3_5" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786084" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Esthiorhiza.3_5" gene 86..244 /gene="Esthiorhiza.3_5_1" CDS 86..244 /gene="Esthiorhiza.3_5_1" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51923.1" /translation="MSNHERRLELIQELDLRFEVGSISREEWKMLRHMYGAPVRESNV LDASSEPA" gene 355..1653 /gene="Esthiorhiza.3_5_2" CDS 355..1653 /gene="Esthiorhiza.3_5_2" /codon_start=1 /product="maturation protein" /protein_id="DAD51924.1" /translation="MPTRTRAIEFGGAMRGKMVTTQRDSFGKITTTETVIDNQAAAAL LKGIQVTESENHPGWTHRKDGYNGDLGGEFFTRRRFASSFNNEPVFLSGFTEDPFTKQ MSQVQYWGPCLPAPTSFLQYPAFAHSNDSTLDKLGSVAIARCSPSNPSADLSVFYNET MKEGIPSMIGATLMKWRNLSARERRRAIGQEYLNYEFGWKPFVNDLKSLSHSIVHAES IRTQYERDSGKLVRRKYGFKPSLTESWTTVRSNVSPWINPSASLLNDTPSVNKGSVIL HSKVEKYQWFSGAFTYYVPPVDGSLRTGLARSFINARKVLGLSLTPDVVWNVTPWSWG IDWFTDTSEVLSNWTDWAIDNQVLAYGYLMEHTISTNTYTFVGPTGFNRKDVRPPDVT LVSETKRRRKATPYGFGLTTGAFTARQKAIVAALGISRSR" gene 1720..2085 /gene="Esthiorhiza.3_5_3" CDS 1720..2085 /gene="Esthiorhiza.3_5_3" /codon_start=1 /product="coat protein" /protein_id="DAD51925.1" /translation="MSFADPQTLTIAPAAAVSLPRTSVGEDESEYTSADGLLQIVASH DYGKRVRRVLRVNASKLTSDPFKPTENVKVSMSLYIVFDLPPAGYTATEAQAVYTGFK NQFTAASDALIVKLLGGES" gene 2134..2322 /gene="Esthiorhiza.3_5_4" CDS 2134..2322 /gene="Esthiorhiza.3_5_4" /codon_start=1 /transl_except=(pos:2134..2136,aa:Met) /product="hypothetical protein" /protein_id="DAD51926.1" /translation="MSDTGPPEWGDGGPNYSTTEEISFRRSISDLTWPQAIVAVGVIN LVTQSIALVGEALITGHL" gene 2319..2528 /gene="Esthiorhiza.3_5_5" CDS 2319..2528 /gene="Esthiorhiza.3_5_5" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51927.1" /translation="MTPNQDERANFTDVVVRRRRSVAKRDCFVITIYMATQPTPAELD LLANTLVAAKQLKVEADRRSLREIL" gene 2609..4513 /gene="Esthiorhiza.3_5_6" CDS 2609..4513 /gene="Esthiorhiza.3_5_6" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51928.1" /translation="MKSLTSLWSCTANELAVRCCTSATRDITTVASRTEHEGLSFLAI TLADYGKAFQHWLDQGFVTPSDVTSFKKDRRTGLPVFLRGFLGRVFCPVSGTLLENPD IEAIYAVRQLTLMYSKIALPQDETSQEESPTRVVSLRRERQAMLEYIQCEQDVRETDD LLDFQYMEDFKRIARLLYTDLFAKMDRDIHWGRLVPKHGPGAVADRISSNAKWSLRTW TSRLNSATLLDEEFLIPNLSFKDELRSELNVLEPGAEMPVKVITVPKTLKTPRIIAVE PAAMQYAQQSLQASLRDALEEDGFLSRIIGIQDQEPNRQLAMWGSRDGSLATLDLSEA SDRVSNQHVLALLEDFPVLSGAVQACRSRKADVPGHGVIRLAKFASMGSALCFPIEAM VFTTLIFLGIERELRAPLTRRAIESYAGTVRVFGDDLIVPRDVVLSVVDELSTFGYRV NISKSYWTGRFRESCGREYFDGHDVSIVKVREVLPTRRQNASSVIAANSLRNQLYWAG LWRSAAWMDRLMGGLLKFYPNVAPSSPLLGRESALGYEFRRLHPYHHSPLTKGYYVMA KPPRDHLEGSGALLKCLIRKPFCKFGLPSPLNGDLNAVEEPKQVDGEHLERSGRPKRV SIKLGWRLPY" ORIGIN 1 ccttgcgggg ccctgggcgc agtgcaacat gtccctatcc tgggactgtc taccaatgag 61 gcttagcctc agaaaggagt tcgtgatgtc aaaccacgaa cgccgcctgg agctaatcca 121 ggaactcgac ctcaggtttg aggtcggaag catctcccgc gaagagtgga agatgctgcg 181 ccacatgtac ggagctcccg tgagggagtc caacgtgttg gacgcgtcct ccgaacccgc 241 ctaataaaat aggtggtcgc cggagaaaac cggcgattgt tcggtcattg gcaatgatgg 301 ttgttggata ggattaagaa ccaaaggagc tggtgccctt ggatggattg ttccatgccg 361 actagaactc gtgctattga gttcggcggc gcaatgcgtg gcaaaatggt gacgacacaa 421 cgggattcgt ttggtaaaat taccacaacg gaaaccgtga tcgataacca agctgctgcg 481 gcattgctca aggggattca ggtaactgaa tctgaaaacc atcctggttg gactcatcgt 541 aaagatgggt acaacgggga tttgggtgga gagttcttca cgcgccgccg gttcgctagt 601 tcgtttaaca acgagccagt gttccttagc ggattcacgg aggatccctt cacgaagcag 661 atgtcccagg ttcaatactg gggcccctgt cttccagcgc caacgagttt cttgcagtat 721 ccggcctttg cccattccaa cgattcaacg ttggataagc ttgggtcggt tgcaattgct 781 cgttgttcgc cgtcaaatcc ctcggcggat ctatccgttt tctataacga gacaatgaag 841 gaaggaattc cttcaatgat tggcgccacc ttgatgaagt ggcgtaatct ctccgctcga 901 gagcgcaggc gcgcaatcgg gcaggagtat ctcaattatg agttcggatg gaagccattt 961 gtcaacgatc ttaagagttt atctcattcg atcgtacacg ccgagtccat taggactcaa 1021 tacgagcgtg attctggcaa attggtccgc cgcaaatatg gtttcaaacc ttcactcacg 1081 gagtcgtgga ccacggtgcg aagcaacgtt agtccttgga ttaacccttc tgcatcgctg 1141 ctaaacgaca cgccgtctgt gaacaagggg agcgtaattc ttcactcgaa agtggagaaa 1201 tatcagtggt ttagtggagc ttttacgtac tatgtaccgc cggtagacgg aagtctccga 1261 acgggactag cacgcagctt cataaacgcg agaaaagttc tcgggttgtc actgactcca 1321 gacgtagtct ggaacgtcac cccttggagc tgggggatcg attggtttac cgatacgtct 1381 gaagttctct cgaactggac ggattgggcc atcgataacc aggtgttggc gtatgggtac 1441 ctgatggaac ataccatcag tacaaatacc tatacgttcg tcggtccgac cggattcaac 1501 cggaaggacg ttcgaccacc cgacgtgacg ctggtttctg aaaccaagcg gcgaaggaag 1561 gcaacaccct atgggttcgg ccttactact ggggctttta cagcccggca gaaagcgatt 1621 gttgccgcgc ttggaatttc caggtcgcgg tagcagacgt gttgtgcctg cgtttcaacg 1681 ccaatagggg gtctaccaag actcctagga gtgatgctca tgtcatttgc tgatccacaa 1741 acgctgacca tcgcgccggc ggccgctgtg tccctcccac gcacttcggt gggtgaggac 1801 gagagcgagt acaccagcgc ggatggtctc ctccagatcg ttgcgagcca tgactatggc 1861 aagcgcgttc ggagggtgtt gcgggtcaac gcctcgaagt tgacctcgga tccgtttaag 1921 ccgacggaga acgtcaaagt ttcgatgagt ttgtacatcg tctttgacct tcctccggct 1981 ggctatacgg caaccgaggc tcaggccgtt tacactggct ttaaaaacca gttcacggcc 2041 gcttccgacg cgctgatcgt caagctgctc ggcggtgagt cctaaacaga ctctcgtcga 2101 ctgcctggtg atctgcggtc gcagagcgat aaagtgtcgg ataccggtcc cccggagtgg 2161 ggagatggtg gtcctaacta ttcgacgacg gaagaaatat ctttccgtcg gagcatcagt 2221 gatctcacct ggccgcaagc aattgtggcc gtaggtgtga ttaatctggt gactcagtcg 2281 atagctctgg taggcgaggc tctcatcacg ggtcatctat gaccccgaat caagatgaga 2341 gagcaaactt tacagatgta gtcgtaaggc gacgtcgttc cgttgcaaaa cgggactgct 2401 tcgtcatcac gatctacatg gcgactcaac caactcccgc ggagctagat ctgctcgcta 2461 ataccttggt tgctgcaaag cagctaaagg ttgaagcgga caggcgaagc ctgcgcgaga 2521 ttctgtaaag ctgtttgcca ggattcgttt cctggttgac atcgacgaca tgggctaggg 2581 aatagccacc tctgttaaag gagggactat gaaaagcctg acgtcactct ggtcctgtac 2641 ggccaatgaa ttggccgtac gatgctgcac tagcgccact cgcgacataa ctactgtcgc 2701 gagtcggact gaacacgaag ggttgtcgtt tctagcgatt accctggcgg actatggaaa 2761 agcctttcaa cattggcttg accaagggtt cgtcacccct tccgacgtta cttctttcaa 2821 gaaggatcgt cgtactgggc tccccgtatt cctacgaggt ttccttgggc gtgtgttctg 2881 tcctgtaagc ggcactcttc tggagaatcc agacattgaa gcaatctatg ccgtgcgtca 2941 gctaacgctg atgtatagca agatagctct ccctcaggat gaaacctcgc aagaggaatc 3001 acccacgcgg gttgtaagcc tgcggcgtga gagacaagca atgctggagt acatccagtg 3061 tgagcaggac gtccgagaaa cggatgattt gcttgacttc caatatatgg aagatttcaa 3121 gcgcatcgcc cgtttgcttt atacggactt gttcgccaaa atggatagag atatccattg 3181 gggtcgacta gttccgaagc acggtccagg tgcagttgca gatcgcatta gcagtaatgc 3241 taagtggtct ctgcgcactt ggacgtctcg cctcaattca gctactctgc tggatgagga 3301 attccttatc ccgaacttgt cctttaagga cgagcttagg agtgaattga acgtcctcga 3361 acccggcgcc gagatgcctg ttaaggtcat cacggttcct aaaacgctca aaacaccacg 3421 gattattgct gtagagccgg ctgcgatgca atatgcacag cagtcactcc aggcaagtct 3481 tcgtgatgcg ttggaagagg atggtttcct ctcccgcatt atcggaatcc aggaccaaga 3541 gccgaatagg caattggcca tgtggggatc tagagatgga tcccttgcaa cgctcgattt 3601 gagcgaggct tccgatcgtg tttcgaatca gcatgtactg gctctgctgg aagacttccc 3661 cgtattgtct ggggcggtcc aagcctgcag gtccaggaag gctgatgtac ctggtcatgg 3721 cgtaatacgc ctagccaagt ttgcgtctat gggttcagct ctatgctttc ccattgaagc 3781 gatggtcttt acgaccctca tattccttgg gattgagcga gagctaagag ctccgctgac 3841 ccgacgtgcg attgaatcgt acgccggaac ggtgcgtgtc tttggggatg atctcattgt 3901 tcccagagac gtagtgcttt ccgtcgttga tgaactcagt acctttgggt accgggttaa 3961 catcagcaag tcttactgga ccggaaggtt cagagagtct tgtggacgag agtattttga 4021 cggccatgac gtgagtattg tcaaggtccg agaagtgctc ccgacgcgac gacagaatgc 4081 gagtagcgtg atagctgcta actcgctcag gaaccagctt tattgggctg gcctgtggcg 4141 atcagcggcg tggatggatc gactaatggg aggactgtta aagttctacc caaacgtcgc 4201 tccatcgtca ccactgttgg gcagggagtc ggcgctcgga tatgaattcc gacgccttca 4261 tccatatcat cacagccctc taaccaaggg ctattatgtg atggccaaac ctcctcggga 4321 tcatctcgag gggagtggtg cccttctcaa atgcctcatc agaaaaccgt tttgtaagtt 4381 cggtcttccg agcccgctta acggcgattt gaatgccgtc gaggagccaa aacaagtcga 4441 tggcgagcat ttggagcgtt ctggacgccc caagcgcgtc agcatcaagc ttgggtggag 4501 gctgccctac tagtagggta gtcggggact cgttttaacg agcctcgtgg gaggttgaaa 4561 gcctctccct ctccggacct aaccatcagg ttagtcctgg agtctggagg aactcgggca 4621 actgagttgt cctctaaggg agatgcattg ctttcgcagt gcatctcc //