LOCUS BK013418 3382 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Esthiorhiza.4_11 genomic sequence. ACCESSION BK013418 VERSION BK013418.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Esthiorhiza.4_11 ORGANISM ssRNA phage Esthiorhiza.4_11 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Chlurivirus; Chlurivirus chorocola. REFERENCE 1 (bases 1 to 3382) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3382) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-3382 MN035288.1 1-3382 FEATURES Location/Qualifiers source 1..3382 /organism="ssRNA phage Esthiorhiza.4_11" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786091" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Chlurivirus; Chlurivirus Esthiorhiza.4_11" gene <1..1197 /gene="Esthiorhiza.4_11_1" CDS <1..1197 /gene="Esthiorhiza.4_11_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50056.1" /translation="PSQKRGWLTRVAAFRCPEFRKTVVLGVPRDRLRTAGVHTGHSTH LPTGQTFVVSVSPLWYDRCQDTAYNRDYPNPLSIEHRHYLKVGTVSGKAPAFPVYSMS GYPFDNQGFSASHPAVPTLPTPVEAITRVQASTNPSYNSNIDVSLPNFLFELKDIPSM LRQKGTNHRSTQSSNSTAEYNFGWAQLFRDLQTMLHFTTTVDEHIATQEFIAKNGGLK RKRGVYSSSTLVSGAPTTFQSFNVGVLGFVNKVQRVDMWASIQWAPNDTGIKSGEEMR SLALRQAHGWDFSSGAIASVIWEAMPWSWFADYFGNVGTYFKSQRNLLNMTAHNGCVM TRVTTTQSQVITSVSPGFVASPGSYKYETKSRVLANAGLSFASIPLFGAGQLVTLSSI IQSLGK" gene 1243..1608 /gene="Esthiorhiza.4_11_2" CDS 1243..1608 /gene="Esthiorhiza.4_11_2" /codon_start=1 /product="coat protein" /protein_id="DAD50057.1" /translation="MSFGATLTITVNSVAKVLNRINQDNYGSEYYLRSSLDEYRVKIR HSKESPLSDGRQFDRHNVEVTHTVFAVGAVPEIKRVDSFTNRTLGTDDITASGYLFAA FATYMANATVQGDLLTWQS" gene 1674..>3382 /gene="Esthiorhiza.4_11_3" CDS 1674..>3382 /gene="Esthiorhiza.4_11_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50058.1" /translation="MNKGLTDSFIGLYRSIFEDIVVYHPTLREEFSRDLKRLEALSEN SGINVFTLMLPAIGKAFFASLESGVLSFDGLPLTRSINRRSAIPRLFRGMWLTMFEHS GCLRRDINHLDVQRMSTILFSCKKFEVECSAQATMSTVKEYYDVDEQLPAPSQSWDGD GSDLPLGHSRSLLDLLHPNEDLFSVGSLPRDEARMLSVCQHVADRVSSLFGVFYPSQS RFRHGPGAVSDSTKGKRYKYHFLEWGPRLQWVFPAAEFAFANLRVAGATDDYEAAGLP LREGASMLYAVPKTQKAPRLIAAEPTCNQWAQQSVRHWLTDVIRSNALGDSIDFSRQD LSGELALAASADKSLATVDLSAASDRLSCWLVERLFRANSSLLSSMIACRTRYIINTI DKKSPKLHKLRKFASMGSALTFPIQSISFYIICVAAGVLAENADVGDWKRLGRQVRVY GDDLIVPVSWMPFVEQLLKRLFLKVNRAKTFTEGNFRESCGTNAYAGHSVSPGQILHF YDESKLSTLQGVVDSSNNLFAKGFERTAQYLVSPVAPAIRKLIPDVAIGAESFGLWSA MGFS" ORIGIN 1 ccctctcaga agagagggtg gctgactcga gtcgcagcat ttcgctgtcc tgaattcaga 61 aagaccgtag ttttgggtgt accacgagat cgattacgaa cagctggtgt tcatactggg 121 catagtactc acttgcccac tggacaaaca tttgtcgttt cggtctcacc tttgtggtac 181 gatcggtgtc aggatactgc ctataatagg gactatccta atccgttatc catcgagcac 241 agacattatt tgaaggtcgg tactgtctct ggtaaagcgc ctgcgttccc ggtatattct 301 atgtccgggt acccattcga taaccaggga ttttccgctt ctcatcctgc cgtgcccacc 361 ctccctacgc ccgttgaagc tataacccga gtgcaagcta gcacgaaccc gtcatataat 421 tccaatattg acgtgtcctt gcctaacttc ctattcgagt tgaaggatat accttcaatg 481 cttcggcaga agggtactaa ccatcgaagt actcagtcgt cgaactcgac ggcagagtat 541 aacttcggtt gggcccaact gtttcgagac ctccagacta tgttgcattt tactacaaca 601 gtcgatgaac atattgctac gcaagagttc atcgcgaaga atggaggact gaaacgtaaa 661 cgcggcgtct atagtagttc gacgcttgtg tctggggctc ctaccacgtt ccagagtttt 721 aatgtgggcg ttctgggctt tgtaaacaaa gttcagcgcg tcgacatgtg ggcgtccatt 781 caatgggcac ctaatgacac tggaattaag tctggtgaag aaatgcgatc tctcgcgctt 841 cgtcaggctc atggttggga cttctctagt ggcgctattg ctagcgtcat ttgggaagct 901 atgccctgga gttggtttgc cgactatttt gggaacgttg ggacttattt caagtctcag 961 cgtaatctcc ttaatatgac ggcacacaac gggtgcgtaa tgacccgggt tactacaaca 1021 cagtcgcaag taattacgtc tgtgtcaccc ggattcgtag catcccctgg tagctataaa 1081 tacgagacaa aatctcgtgt tttagctaat gcgggtcttt ctttcgcatc catacccttg 1141 ttcggggctg gacaattggt gactttgtcg tcgattatcc agtcactagg aaagtgattg 1201 gatcatcgcc ctacgacggg cttaacgaca aaggagacta tcatgtcctt cggtgcaact 1261 cttaccatca cggttaactc cgtggctaag gtactgaatc gcattaatca agacaattac 1321 ggcagcgagt attacttgcg ctcgtctctc gacgagtacc gggttaagat ccggcacagc 1381 aaggaatctc cgctcagcga tggacgtcag ttcgaccgtc ataacgtcga agtgacccat 1441 actgtgttcg ccgtgggcgc tgttcccgaa atcaagcgag tcgattcgtt caccaacagg 1501 acgttgggga cggacgatat cactgcctcc gggtatctgt ttgcagcttt tgctacttat 1561 atggcaaatg ctactgtaca gggcgacctt ctcacctggc agtcgtaacg actgttcagt 1621 tgagttaact gtctgaagga ccaggattca ttagaccact ataggagtga cctatgaaca 1681 aaggcctgac tgatagtttc atcggactct accgcagtat cttcgaagat attgtggttt 1741 atcatccaac tctccgcgag gaattcagtc gcgacttaaa gcgactcgag gcccttagtg 1801 agaacagtgg cattaacgtc tttacgttga tgctacccgc aatcgggaag gcattctttg 1861 cctccctcga aagtggcgtc cttagcttcg atggtttacc tcttacgagg tctatcaatc 1921 gaagatccgc aatccctaga ctattccggg gaatgtggtt gacgatgttc gaacatagcg 1981 ggtgtctgag gcgtgacatc aaccatctcg atgttcagcg catgagtact atcttgttct 2041 catgcaagaa attcgaagtg gagtgctccg cacaggcgac aatgtcaact gtgaaggagt 2101 actatgatgt cgacgagcaa cttccggcac cgtctcaatc ctgggacggt gacgggtcag 2161 atcttccttt gggccatagt cggtctcttc ttgaccttct acaccctaat gaggatttat 2221 tctccgtggg atctctccct agagatgaag ctcgtatgct ctcagtctgc caacatgtgg 2281 cagaccgagt ctctagcctg tttggggtat tctacccctc tcagtctagg ttcagacatg 2341 gacctggtgc cgtatctgac tccacaaagg gaaagcgata caagtatcac tttctcgaat 2401 ggggtccgag actccagtgg gtattccctg ccgccgagtt tgcttttgca aatctcagag 2461 tagcaggggc tactgatgac tacgaagctg ccggtcttcc cttgcgggaa ggcgctagca 2521 tgctctatgc tgtacccaag acacagaagg ctcctcggct tatcgccgcc gaacctacct 2581 gtaatcaatg ggcccaacag tcagtgcgcc attggctcac tgatgtcatc agatccaatg 2641 cactgggaga ttctatcgac ttcagtcgac aagacctctc tggtgaattg gctctcgctg 2701 caagtgctga taagtctctg gctactgtcg atctctcggc agcgtcagat agattgtcct 2761 gctggctcgt ggaaagactg ttcagagcga atagctcttt actttcgtcc atgattgcct 2821 gccggacacg ctatattatc aacacaatag acaagaaatc tccaaagctt cacaagctga 2881 ggaagtttgc gtctatgggt tcggcactta ccttccctat ccagtccatt tccttctaca 2941 tcatatgcgt cgcagcaggt gttcttgctg agaatgcaga cgttggagat tggaagcggc 3001 tcggtaggca ggtccgagta tacggtgacg atttaatcgt ccccgtatct tggatgccgt 3061 tcgtagaaca gctcttgaaa aggctgtttt tgaaggtgaa tcgggccaaa acattcacgg 3121 agggaaactt ccgggaatcc tgtggtacga atgcctacgc gggacattct gtctcgcctg 3181 ggcagatcct tcatttctac gatgagtcca aactcagtac cctccagggt gttgtcgata 3241 gctcgaataa cctttttgca aagggtttcg agcgaaccgc tcaatacctt gtatcaccag 3301 tggcgcctgc tatcaggaaa ctgataccag acgtggctat tggggctgag tccttcggtc 3361 tctggtcagc tatgggtttc tc //