LOCUS BK013511 4388 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Esthiorhiza.4_12 genomic sequence. ACCESSION BK013511 VERSION BK013511.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Esthiorhiza.4_12 ORGANISM ssRNA phage Esthiorhiza.4_12 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Weheuvirus; Weheuvirus solivivens. REFERENCE 1 (bases 1 to 4388) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4388) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-4388 MN036277.1 1-4388 FEATURES Location/Qualifiers source 1..4388 /organism="ssRNA phage Esthiorhiza.4_12" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786092" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Weheuvirus; Weheuvirus Esthiorhiza.4_12" gene 117..1499 /gene="Esthiorhiza.4_12_1" CDS 117..1499 /gene="Esthiorhiza.4_12_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50384.1" /translation="MSTFSRYRERFSAVGSIKNATTKPVGTLKTYSSGVLQSSNNVFL TGAGPSGLFEKCWDHNNAKSSIRGRRGSRAFRTGGDFASIKVSSSSLSPQATSTITSV FGNQKTVYTGGLGYNPINFLDPISPTVYQQGGSPNLKSNSFVTDTSGLESRAFTSIMP KVEKVSALNALYEFKDIPGMLQQTARFFKDAFVQEVGIKYAKENILMPSRVAGDYLNV QFGWIPFCKDISAMADYLLFSKQYLEDITHGNNAWVKRKGTLANVTTRTKLGKVYTAG CEPQLSQLCEVRSIDGNLCNGICEVWSEETILCWAEGAFKYYRPEFDINLPYYGTTVA AVNRHLTASGLRLTPYHVWKAIPWSWAVDWFSNVGRIIEANDAQTIDGMVTKYLYLMH HHLRKITSFHTYFFHQGATSLTTSRFIDVKQRQSGFSPYGFVLGGDLSATQWSILAAL GLSGNVKFSK" gene 1614..1970 /gene="Esthiorhiza.4_12_2" CDS 1614..1970 /gene="Esthiorhiza.4_12_2" /codon_start=1 /product="coat protein" /protein_id="DAD50385.1" /translation="MAFADPIANVTYATVAQTLPRISTNGTKSIYRKSDGSLVMTLSH LTSKNRVRSMARLDRNIDTDANSILDTNGAVYIVWDRPLTGFSETDVVDQTSCLFGML TASTNAGIKKMYAQES" gene 1973..2248 /gene="Esthiorhiza.4_12_3" CDS 1973..2248 /gene="Esthiorhiza.4_12_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50386.1" /translation="MTLDTVHSSLQTDRASKALMALQLVSAGLNIARPFAPKARLHLA AVIADSLSLYFAKTTEEVANGHMAVAGSLQAMSEEHQKRATDVMSVL" gene 2349..4289 /gene="Esthiorhiza.4_12_4" CDS 2349..4289 /gene="Esthiorhiza.4_12_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50387.1" /translation="MRLDRLPPILEVPVKSNVSDYLELVSIIYRDATTRCSADVSDLR DLITIRSRTEHEGLSFLTITLPSFCKAIERCLALGYIDPSFRSTLFRGFPFNGQVPAF LQGVVGQLFSRENGRINDENVSTLDTAPYVDAIRQICLCFNKVQLPCTPEREHAAIES FIAIERSFQELSTPKEVTDEFKSVSSVLWDNIVYNLRYSELLPRHGPGATAERISGNS KYSWQSWYERLDNYFPFFDYAYLTSAVESKEFKGVSFISEDEELPVRVTPVPKTLKGP RIIAIEPVCMQYAQQAIRSVLYDVIEGSRIAGGHVNFRDQSVNQKIALTSSFDGQFAT IDLSEASDRVPCDLAMEMFSAYPEFSGLVEACRSKKAVLPDGRIIGPLRKFASMGSAL CFPVESMYFYTICVAALLRSQNLPCTPRNCYIVSRSVYVYGDDIIVPTNQAGIVLEYL QKYNCKVNSAKTFTSGSFRESCGVDAFAGKLVTPVYIRQPRPENKQQVSSIISWSATA NLFFKKGYVRTAEYMHSICAGILGYYPEISETCSGLGRIYRFGGIKSKIRFNSKLHRP EVRAWIPSAVYRTDELDGYAALQKSLLKLERHQKRPLLGLTLEALSKLDFDFQSTDDP KHLERTALYGAVNLKLRWVPTS" ORIGIN 1 gggccttcgg gcccgtctga gtgttcagca aagagcactt acaaaaccat ttcatttgca 61 agtcaaggaa gttccttgat taacttatgt ttttacttgc ttaggagcta ttgcctatgt 121 ccacattttc ccgatatcga gaacggtttt cggccgttgg gtcgattaag aacgcaacaa 181 ccaagccggt gggtacctta aaaacgtact cctcgggcgt tctccagtct tcgaacaatg 241 tgttcttaac tggagccggc ccttccgggt tatttgaaaa gtgttgggac cataataacg 301 ctaaatcctc tattagagga cgacgcgggt ctcgcgcttt tcgaaccgga ggggattttg 361 cctcgattaa ggtgagttcg tcgtcactgt cgcctcaagc gacatcgacc attacatctg 421 ttttcggtaa tcagaagaca gtgtatactg gtgggttagg ttataaccca attaattttc 481 tagatccgat ctctcctact gtttatcagc agggggggtc gccgaatctg aaatctaatt 541 cgttcgtgac cgatacaagt ggactagagt cccgggcatt tacttctata atgcccaaag 601 tagagaaagt atctgccttg aatgccctat atgaatttaa ggacattcct ggcatgcttc 661 agcagactgc ccgcttcttt aaggacgctt tcgtccaaga agtagggatt aagtatgcta 721 aagaaaacat cctgatgccc agtagggtag caggagacta tctcaacgtc caatttggat 781 ggatcccctt ttgcaaagat atatcagcaa tggctgatta tcttttgttt tccaagcaat 841 accttgaaga tattactcat ggtaataatg cttgggtaaa gaggaaaggg actctcgcta 901 atgttaccac gcgcacaaag ttaggaaagg tttacaccgc agggtgtgaa cctcaacttt 961 ctcaattgtg cgaagtgagg tcgatagacg ggaatttgtg caacggcatt tgcgaagtct 1021 ggtctgagga gaccattctc tgctgggccg aaggcgcatt caagtactat cgaccggagt 1081 tcgacatcaa cctgccctat tatgggacta cggttgctgc cgtaaaccgt catttgacgg 1141 cttccggcct tcggttgact ccgtatcatg tttggaaggc aataccttgg tcatgggccg 1201 ttgattggtt tagcaacgtt ggtcgaataa tcgaagccaa cgatgcacaa actatcgacg 1261 gtatggtgac taaatatctc tacttgatgc accatcattt gaggaagatt acgagttttc 1321 atacgtattt cttccatcaa ggtgcaacat ctttgaccac ctctcgtttt atcgatgtga 1381 aacaaagaca gagtggattt agtccttatg gttttgtcct tggtggcgat ttatctgcca 1441 ctcaatggtc tatccttgca gctcttgggc tttcgggaaa cgttaagttc tcgaaatagt 1501 tttcccaaaa ttgcttggat attacactca ctctctttga tcagcgttac caggttggga 1561 atctggtgcg ccagagtgat ttcactccct tttactctta ggaggtcaac cacatggcat 1621 ttgccgatcc tatcgcaaat gtgacatacg caactgttgc tcagacatta ccacgtattt 1681 ctacaaatgg aactaaatcc atttatagaa aatcggatgg ttctcttgtc atgacacttt 1741 cccatctcac ctctaaaaat cgggtgagat cgatggcaag gcttgacaga aacatcgata 1801 ccgacgccaa tagcatcctt gatactaatg gtgccgtgta tatcgtctgg gatcgtcccc 1861 ttacggggtt ttccgagacc gacgtggtcg atcagacctc atgccttttt ggcatgttga 1921 ctgcttcgac taatgctggc attaagaaga tgtatgcaca ggagtcttaa ttatgactct 1981 tgacaccgta cattcttcgc tgcaaaccga tagagcctca aaggctctca tggctctgca 2041 actggtctca gcgggtttaa acatcgctag gcctttcgcg cctaaagcgc gattacacct 2101 tgcagctgtc attgctgatt ctttatcgtt gtactttgct aagactaccg aagaggtagc 2161 aaacggtcat atggccgttg ctggttctct ccaggcgatg tctgaagaac accagaagcg 2221 tgcaacggac gttatgtctg tcctttaaca cggctacata atgttgatca gggtaatcga 2281 cctttaaggt taccttttgc ggggtgtcac atgcgtgatg cttattactg catcagaagg 2341 tagataccat gaggcttgac aggttgcccc ctattttgga ggtccctgtg aaaagcaacg 2401 taagtgacta cctggagttg gtgagtatca tctatagaga tgctaccacc aggtgctctg 2461 ctgatgtctc tgatttacgt gatctaataa ctataagatc acggactgaa cacgagggtt 2521 tatcgttttt gacgattacc cttccttcct tttgtaaggc aatcgaaaga tgccttgcat 2581 taggttatat tgacccatcg tttaggtcta ccctgtttag gggttttcct tttaacggac 2641 aagtccctgc atttttgcaa ggagttgtcg gtcagttgtt cagtcgtgag aatgggagaa 2701 tcaacgatga aaatgtttct actctcgata ctgcccccta tgttgatgct attcggcaga 2761 tatgcctttg cttcaacaag gtacagctgc cgtgtactcc cgagagggag cacgcggcaa 2821 tcgaaagttt catcgctatt gagcgatcct ttcaagagct ttcaacgccg aaagaagtta 2881 ccgatgaatt taaatcagta tcttctgtgc tttgggacaa tatcgtatat aacttacgtt 2941 atagcgaatt gttacctagg cacggtcccg gcgccaccgc tgagcgtatt tcaggtaatt 3001 cgaaatattc ttggcagtcc tggtatgaac gccttgataa ttacttccct ttcttcgatt 3061 atgcgtattt aacatccgca gtcgaatcaa aggaattcaa gggagtttcg tttatatcag 3121 aggatgagga attacccgta agggttactc ccgttccgaa aactctgaaa ggaccccgta 3181 tcattgcaat tgaaccagtt tgtatgcaat atgcacaaca agcgattcga tccgttcttt 3241 atgacgttat cgaaggttcc cgtattgccg gtggtcacgt aaatttccgt gaccaatccg 3301 tcaatcagaa gattgctttg acttcgtcct ttgacggtca atttgcaacg attgatcttt 3361 cagaagcgag tgatcgtgtt ccatgtgatc ttgctatgga aatgttctcg gcctatccag 3421 aattttctgg attggtggag gcatgtcgat cgaagaaggc ggttttgcca gatggccgta 3481 ttataggccc tctacgtaaa ttcgcttcta tgggttctgc tctctgcttt ccggtagagt 3541 cgatgtactt ctacactatc tgtgtagcgg ctctgcttag atcgcagaat ctcccatgca 3601 ctcctcgaaa ctgttatatc gtttctagga gtgtctacgt ttatggtgac gatataatcg 3661 ttcccacaaa ccaggcaggc attgttctcg aatacctgca aaagtacaat tgcaaggtaa 3721 actctgcaaa gacttttaca agcggaagct ttcgagagtc ctgcggggta gacgctttcg 3781 ctggtaaatt ggtaacacca gtttacatca gacagccgcg tcctgagaac aagcagcaag 3841 tttcgagcat tatttcctgg tccgcaacgg caaatctctt ctttaagaag ggatatgtcc 3901 gaacggctga gtacatgcat tcgatatgtg ctgggatcct gggatattat ccagagatct 3961 cggaaacttg ttcggggctt ggacgtatct atcgttttgg gggaataaaa tcgaaaattc 4021 gatttaattc taaactccat cgtcctgaag taagggcgtg gatcccatct gcagtttatc 4081 gcacagatga gctggatgga tacgctgctc tacaaaagag tttgctcaag ttagaacgcc 4141 atcaaaagcg tcctcttctc gggctcactc tggaggcttt gtctaaactg gactttgatt 4201 ttcaaagtac ggatgatcca aagcatttag agcgaactgc actgtacgga gcagtgaacc 4261 taaaactccg ttgggtccca acctcgtaaa ttgttgggta cggtggtata actccacctg 4321 gaggggcaca attgtccatg acgccgctaa cgcggattgt cgggcctttt ggcagtgcat 4381 cccctctg //