LOCUS BK013935 4037 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Esthiorhiza.4_2 genomic sequence, sequence. ACCESSION BK013935 VERSION BK013935.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Esthiorhiza.4_2 ORGANISM ssRNA phage Esthiorhiza.4_2 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Pohlydovirus; Pohlydovirus arvivicinum. REFERENCE 1 (bases 1 to 4037) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4037) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034767 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4037 /organism="ssRNA phage Esthiorhiza.4_2" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786100" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Pohlydovirus; Pohlydovirus Esthiorhiza.4_2" gene 71..1339 /gene="Esthiorhiza.4_2_1" CDS 71..1339 /gene="Esthiorhiza.4_2_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51846.1" /translation="MYYSNKPVSAYFYRERQTFTDLDPTVQKYFENWTASPDKFNSRS GGSSKDWKRAIAQRISASTGYSVEHWEVEKEPGYCIFDYTYKVTGRTYYNRILQDLTG FTNWPPFYAGDISDIDDQARTQFLSRCFRAQHTFQGGVFLGELREAVHMIRHPLDSLV GGMQQYLNALRRRKRKGIGHGRRLQKMIADTWLEYVFGWGPLLSDIDSGAQALANATT YRAPTKHVIGSAKKSEVVHGTYSDVISPDNQYYFVSYKPITKTEVEVKYIGGVYAKAG GDGISSNLADFGVDMRSFLPTLWELIPYSFLVDYISNVGQFVEGLSFMTSDLIYVTRT LKSTTERWASGFQTQNNIQHDDSFLIRNELFVPGSSRMAGSLYQRNDVLSSIGLPSLA FTLENLNFRRGANISALGAAAAATSRHLNS" gene 1352..1819 /gene="Esthiorhiza.4_2_2" CDS 1352..1819 /gene="Esthiorhiza.4_2_2" /codon_start=1 /product="coat protein" /protein_id="DAD51847.1" /translation="MTIPVTSPVTGGAQTGFTSPTYTLVADKSIDVNSTQYAVTALGG TQAGVRASAVSDPFTIAVSKPKNPRALPSPNPITGKYGDVPFNRTSIVVRKGMNFAAN NAPLIGYVRVYIDVPAGADAYDAANVRAAISLAIGELSAQSAGVGDSACTGVI" gene 1855..2253 /gene="Esthiorhiza.4_2_3" CDS 1855..2253 /gene="Esthiorhiza.4_2_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51848.1" /translation="MITVTSWKEYTTHLIARGFYLTLAAERRTEAQWKHAERLAGLCV SGEGPLHTTLDFTNGKSRLPIEYDMELTYVGETCKLDLHVCRRLLWSLAHFGQMLAGL PEGESYEYYVEPDSDDRQLCIAASVLFKVQ" gene 2287..3993 /gene="Esthiorhiza.4_2_4" CDS 2287..3993 /gene="Esthiorhiza.4_2_4" /codon_start=1 /transl_except=(pos:2287..2289,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD51849.1" /translation="MDLNPNALYQCLLSDLKDQLGSVFSLCGKDIYPVGLSVREYAGL SLSNSLLKKFCERATPDADQKALEKFEESNYRCALWTLQPNTSLDEVLLGCVKHMAWE FFNPGGYPLDLGPISLHSCGDVGPGASVGAVAQDFYTKLFASPLSCTSLKLYNMYNTM VSRIPAWSAAEKQRFSTFGGPTIVPGNRLSFVPKTTKVSRTICVEPTLNMWYQLGCYN VLSRRLRNRFGIDLRNQQDKNRVLACRGSISGAFGTIDLESASDTISTSMLRWLLPAT IFRDLSLYRSPNVAYSTFDSRALWMFSSMGNGFTFPLQTVIFSCVVCAVYWYLGIKPL KPSTGFGNYGVFGDDIICVAESYSLVVHLLGLLGFRVNQHKSFNNGPFRESCGADYYH GFNVRGVYLKSSQMPSLFAAINQLNIFTARTGVRVPLTSAFLRKHVPWTTVPLWENDD AGIRTPLSFVTPRLDSNGSYAYYAWKPESAKLKVSDDEVSVPKGSKKRFFNPDGLHCA FLAGRLISMTIPIRHDRVRYRRKLSVAPNWEFSPSLATETSALRRAGEWKRCETAFYL NL" ORIGIN 1 aactttcgtt tcttaggttg aggtgtaaga cgtcaatcca ccaggaatat cagcaccact 61 tgagggccca atgtattaca gtaataaacc tgtttcggcc tacttctacc gtgagaggca 121 aacgtttacc gaccttgatc ctactgtcca gaagtatttt gaaaattgga cggcttcgcc 181 ggacaaattc aattctcgtt ctggcggtag ctctaaggat tggaaacgtg ctatcgcaca 241 gcggatttcg gcttcaacgg gctactctgt tgagcattgg gaagtcgaga aggaacccgg 301 atattgtata ttcgactata cctataaggt cactggtcga acgtattaca accggatcct 361 tcaagatctg accggtttta ctaactggcc gcccttctat gctggtgata tatctgatat 421 tgatgatcaa gcacgtacgc agtttttatc acgctgcttt agagcacagc acacctttca 481 aggtggcgtg ttcttgggcg agttgcgtga ggctgtgcac atgattcgtc atccgctaga 541 ttctctggta ggtggcatgc aacagtacct taacgccttg cgaagacgca agcgtaaagg 601 gatagggcat ggccgccgac tccagaagat gatagctgat acttggctcg agtacgtgtt 661 tggctggggc cctttactga gtgacattga ttccggagcg caagctctgg ccaatgctac 721 gacgtatcgg gcaccgacta agcacgttat tggttctgca aagaagtctg aggttgtgca 781 tggcacctat tccgacgtta tttctcccga caatcagtac tattttgtga gctataagcc 841 cataactaag actgaagtcg aggttaaata catcggtggt gtctacgcaa aagcaggcgg 901 ggacggaatt tcctctaatc tagccgattt cggcgttgat atgcggtcat tcttacccac 961 attatgggag ttgatcccat actcgttcct cgtggactac attagtaatg taggccagtt 1021 cgtcgaaggt ctaagcttca tgacgtctga tcttatctat gtcacacgaa cccttaagtc 1081 gaccaccgaa cggtgggcgt cagggttcca gacacagaat aatattcagc atgatgacag 1141 ctttttgatc cgaaacgaac tattcgttcc tggtagctcg cgaatggcgg gcagtctcta 1201 tcaacggaat gatgttcttt ccagtattgg attgccatct ttggctttca ctctggagaa 1261 tctcaatttc cgtcggggtg ctaatattag cgcccttgga gctgcagcag ccgctacttc 1321 gcgtcattta aacagttgat ctagaggtcc tatgaccatt ccagtcactt cccccgttac 1381 agggggtgct caaacaggat ttacctcgcc aacatacacg ttggtggcgg ataaatctat 1441 cgacgttaac tcgactcagt atgctgttac cgcattaggc ggtacgcaag ccggggttcg 1501 tgctagcgcc gtgtctgacc cgtttactat tgcggtgtcg aagccgaaga accctcgggc 1561 tcttccgtct ccgaacccaa ttacgggaaa gtacggggat gtaccgttca atcggacgtc 1621 cattgttgtt cgcaaaggca tgaactttgc agctaataat gcgcctctca tcggctacgt 1681 gcgcgtctat atagacgttc ccgcaggcgc tgatgcgtat gacgctgcaa atgttcgtgc 1741 tgctatctcc ctcgccatcg gtgagctttc tgctcagtcg gctggcgtcg gtgactccgc 1801 ttgtacggga gtcatttagt atctttatta acccctttgg ggtaggagtt tctaatgatt 1861 accgttacca gttggaagga atacacaact cacttgatcg cgcgtggttt ctacctaact 1921 ttggctgccg aaaggcgtac cgaagctcag tggaaacacg cggagcgact agcagggtta 1981 tgtgtttcag gagagggtcc tctccatacc acgctcgatt ttacgaacgg caagagccgt 2041 ttgcctatcg aatatgatat ggagctgact tacgtcggtg agacttgcaa gctagacctt 2101 catgtgtgcc gtcgactttt gtggtcgtta gcgcactttg gtcagatgct tgcagggctt 2161 cccgaaggtg agtcatatga atactatgtt gaaccagatt cggacgaccg acagctttgt 2221 attgctgcct ccgtcctttt caaagttcag tagtacctct ctgattgcga acttgaggag 2281 acgttagtgg acttaaatcc caatgctctt tatcaatgcc tgctttcaga cttgaaagat 2341 cagcttggtt ctgtcttttc cctttgtggg aaagatatct accctgttgg tctttctgtt 2401 cgcgagtacg ctggtcttag tctcagcaat agtctgctca aaaagttttg tgagcgggct 2461 acgcctgacg cggatcagaa agctctcgaa aagttcgaag agagtaacta tcgttgcgct 2521 ctatggactt tacaaccaaa cacctccctt gacgaggttc tcctcggctg tgttaaacac 2581 atggcctggg agttctttaa tccgggaggg taccctttgg accttggacc gatttcactg 2641 cattcctgtg gtgacgttgg tcccggggcc tcggtaggtg cggtagctca ggacttctat 2701 acgaagctct ttgctagtcc gttaagttgt actagtttga aattgtacaa tatgtacaat 2761 acgatggtat caaggatccc ggcgtggagc gctgctgaaa aacagcgatt ctctacgttt 2821 ggaggcccca ccatcgtgcc aggtaatcgt cttagcttcg ttccaaaaac gaccaaagta 2881 tcccgtacca tctgtgttga gcccacacta aatatgtggt atcaactagg gtgttacaat 2941 gtcttgtccc gtaggcttcg gaatcgattc ggtatcgatc ttcggaacca gcaggataag 3001 aatagggtac tagcttgtcg aggttctata tctggtgcct ttggcaccat cgatttggag 3061 tccgcttcgg acaccatctc gacgtccatg ttaaggtggc ttttacctgc tacgatcttt 3121 cgagacctta gcttgtatcg atcacctaac gtggcatatt ctacctttga ctcgcgcgcg 3181 ctttggatgt ttagcagcat ggggaatggt tttacctttc ctttgcagac tgtcatcttt 3241 agttgcgtgg tttgtgctgt atactggtat ctagggatta aacccttgaa gccttctaca 3301 gggtttggaa attacggggt ctttggggac gacatcatat gtgtagctga aagctactca 3361 cttgttgttc atctccttgg cctcctcggt ttccgagtta accaacacaa gtcctttaac 3421 aatggaccgt tcagagagtc atgtggcgct gactactacc acggctttaa tgtccgcggt 3481 gtctatttaa aaagtagtca gatgccatca ctctttgctg ccattaacca gcttaacata 3541 ttcaccgcac gaacgggtgt ccgggttcca cttacttccg catttttgcg caagcatgtg 3601 ccctggacta ccgttcctct gtgggagaat gatgatgctg ggattcgcac ccccttatca 3661 ttcgttaccc cacggctaga cagcaacggg tcctatgcat attatgcatg gaagcccgaa 3721 tctgcgaagc ttaaggtgtc cgatgacgag gtgagtgtcc ctaagggatc aaagaagaga 3781 ttctttaacc ctgacgggct ccactgcgca tttttggcag ggagactaat ctccatgact 3841 attcctatca ggcatgatag ggttagatac aggagaaagc tttccgtggc tcctaactgg 3901 gagttttcgc ccagtttggc tacggagacg tcggcgctta gacgcgcagg cgaatggaag 3961 cggtgtgaaa ccgctttcta cttaaaccta taaaggttaa gtagatccca gggcagagat 4021 tgccctcctg gtgtgcg //