LOCUS BK013779 4158 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Esthiorhiza.4_5 genomic sequence. ACCESSION BK013779 VERSION BK013779.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Esthiorhiza.4_5 ORGANISM ssRNA phage Esthiorhiza.4_5 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus neoagrivicinum. REFERENCE 1 (bases 1 to 4158) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4158) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035706 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4158 /organism="ssRNA phage Esthiorhiza.4_5" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786103" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Esthiorhiza.4_5" gene 82..1374 /gene="Esthiorhiza.4_5_1" CDS 82..1374 /gene="Esthiorhiza.4_5_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51296.1" /translation="MAGSESPITTRRRVIPAPQKGYVRGDLTYGSFDTTSKSVNHASG VLDMKNLQGWQTTTSENHPEWRPGHRPTIGDIGGSFFTEKAHCLAAFPPQSIAGLQQV TPSFWSYANYVGPVLPIAPAFMSFPPAFPSGNSTLDAVGAQAIARCKPTNAVADLSTF LGETLREGLPRVIGSAEHWRSKSSAGKKAGDEYLNAQFGWAPFVHDIRSISNAISNAE SIMAQYERDSGRVVRRRYEFPPEEHLSETLVKDNCSPYVLQSSEPMYNSQINKGKVWR MDKTIRRRWFSGGFTYYLPTGGNTRENMARSAALAKKTLGLRLTPDVVWNLAPWSWAV DWFTNTGDVISNVTDWATDGLVLKYGYVMETTVSERTYYFMGPTGFKSDVIPSPVTLV VTTKVRRRANPFGFGVTWGGLSPRQLSIAAALGLTRGR" gene 1450..1812 /gene="Esthiorhiza.4_5_2" CDS 1450..1812 /gene="Esthiorhiza.4_5_2" /codon_start=1 /product="coat protein" /protein_id="DAD51297.1" /translation="MSFTDPQSVTISGTTISLPRTSVGDDESEYSSGDGLTKLSASHQ YGKRVRRVLRLDTSKLAPDAFRPTENVKVAMSCYMVFDLPPAGYTATEALAVYTGFKN QYTAATDALITKLLGGES" gene 1903..2163 /gene="Esthiorhiza.4_5_3" CDS 1903..2163 /gene="Esthiorhiza.4_5_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51298.1" /translation="MTGDNGKHPMFRRRKPKKHQVLHPNPELRSEDRRKVGGRRVTDD LPVATKRAYKTQAVAVVVVVLNFLYLVVEALVSGCSTLPRLL" gene 2208..4127 /gene="Esthiorhiza.4_5_4" CDS 2208..4127 /gene="Esthiorhiza.4_5_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51299.1" /translation="MKSLISLWSCIAHEMAMRCCTSATHDVKTVMRRTEHEGLSFLAI TLADYGKDLQRALDRGFVAPSDFQGFSKIPGRLTGLPSFLRGFHERVFDPCSGALLDV PDIDAIFAIRQLTLMFSKIAFPDQPVKAGQRSNGRQVVSSVRERRAMSEYVQCEQDVR ASDSLLDSSYLDDFRRVSDMLFGDLLAKVDRDVYWGRLIPKHGPGAVADKLSSNGKWN QQTWPARLSRCFPADHFLSPNPHFNEEKLKDLNILEPGSEIPVRVITVPKTLKSPRII AIEPTAMQYAQQALLGAILDAFKEDGFLSRVIGFDDQEPNRVLAHRGSLSGDLATLDL SEASDRVSNQHVRAMCENYPHLHEAIQACRSQKADVPGFGVQRLAKYASMGSALCFPI EAMVFLTLIFLGIERELSAPLSRRQCVKLFSEQVRVFGDDLIVPRDYVLSVVDELHTF GYVVNAGKSYWTGRFRESCGREYYDGHDVSIVKVRQVLPTRRQDASGVISAVALRNQL YWAGIWSGARWLDNYLRKLLKHFPNVAPTSPLLGRESALGYEFSKLDPYLHSPLTKGY IVKAESPRDPLDGSGALLKCLLQRESRLSRVMLPINSDASSAFNTLPSVDDEHLERSG RPEYVNIKLGMASPF" ORIGIN 1 ggcgcagtgc agtacaaccg tcaaccagac cggttgatga ttgggactta ttgtcccagg 61 accgaaagga gctctggttt catggcaggt tctgaaagtc ctataactac acgaagacgg 121 gtcatccccg cgccccaaaa gggctatgtt cggggagacc tgacttacgg tagttttgac 181 actacctcga agagtgttaa tcacgcttcg ggagtgttgg acatgaagaa cctgcagggg 241 tggcaaacaa ccacttctga gaatcatccc gaatggaggc ctggtcacag gcctaccatt 301 ggcgacattg ggggtagctt tttcacggaa aaggctcatt gccttgccgc gtttccgccg 361 caatccattg ctggattgca gcaggttacc ccgtcattct ggtcttacgc taattacgta 421 ggtccagttt tgccgatcgc ccccgcgttt atgtcctttc cccctgcttt cccgagtgga 481 aattccactt tggatgcagt tggggcacag gccattgcgc ggtgtaagcc gaccaatgcc 541 gttgcggatc tctccacatt tcttggagag actttgcgtg agggattacc tcgcgtgatt 601 ggctcagcag aacattggcg ttcaaagtca tctgccggta aaaaggcagg tgacgaatat 661 ttgaacgctc agttcggctg ggcgccattt gtccacgaca ttcggagtat ttcgaatgcc 721 atctcgaatg ctgagtctat tatggctcag tatgagagag atagtggacg agtggttcgc 781 cgccggtatg agttccctcc agaggaacac ctatctgaga cacttgtcaa ggataactgc 841 tctccatatg ttttgcagag cagcgaacct atgtacaatt ctcagataaa caagggcaag 901 gtgtggcgaa tggataaaac cattcgtcgc cgttggttta gcggcggttt tacgtactat 961 cttcccactg gtggtaacac cagagagaat atggcgcgtt ccgctgcgtt ggccaagaaa 1021 actcttggcc ttcgactaac tccagacgtt gtctggaacc ttgcaccttg gagctgggcc 1081 gtcgattggt ttaccaatac tggtgacgtt atttctaacg tcactgattg ggccaccgat 1141 ggtttggttt tgaagtatgg gtatgttatg gagactactg tctctgaacg tacctattac 1201 tttatgggtc cgactggttt taagtcggac gtcatacctt ccccagttac tttggtcgtt 1261 acgaccaagg tgcgtcggag ggcgaatccc tttgggttcg gagttacctg gggtggcctt 1321 tcgccacgcc agctctccat tgcggcagcc cttggtttaa ccagggggcg ttagcacaac 1381 tgtcgtagtt gtactgtacc gcgtcaaaac gccaatggga gtctaaccgg gctcctagga 1441 gtgatgccta tgtcgtttac cgatccgcag tccgttacca tttcgggcac gacgatcagt 1501 ctcccccgca cgagtgtggg ggatgacgag tcggagtact cgagtggcga cggcttgacc 1561 aagctatccg cttcccatca gtacgggaag cgggttcgca gggtgctgcg tctcgacacg 1621 tccaagttgg ctccggatgc gttccggcct acggagaatg tcaaggttgc catgtcatgt 1681 tacatggtct ttgaccttcc gccggccggg tataccgcaa ccgaagccct tgccgtctat 1741 acgggtttca agaaccagta tacggcggct acggacgcgc tgatcacgaa gctcctgggc 1801 ggtgagtcct gacggacaag ctacctagga gggtttgcct ctatacccct atcgtattta 1861 ttacgattag gggtcgtaag aggtcacacc cttttaagct ccatgaccgg cgacaacggt 1921 aaacacccga tgtttcgtag gcgcaagcct aagaagcatc aggtgcttca tccaaatccc 1981 gaacttcgat ctgaagatcg tcgtaaggta ggaggacgaa gggttactga tgaccttccc 2041 gtagcgacaa agcgtgcgta taaaacgcaa gctgttgccg ttgtggttgt ggtcctcaat 2101 ttcctttacc tagttgtaga agctttggtg agtggttgtt ctactctacc taggcttctg 2161 taggctacat caggcacagg attagccacc tcttaatagg agggactatg aaaagcctga 2221 tatcactctg gtcctgcata gcacatgaaa tggctatgcg atgttgcact agcgccacgc 2281 atgacgtaaa aaccgtcatg cgtcggacag aacacgaggg gttatcgttt ttagcgataa 2341 ccctggcaga ctacggtaag gacctccaaa gggccctcga ccgtggtttt gtcgctcctt 2401 cggacttcca aggattttca aagatccctg gtcgtcttac tggtctcccc tcatttctga 2461 gaggtttcca tgagcgcgtg ttcgatcctt gtagtggcgc acttttggat gttccagaca 2521 tcgatgcaat cttcgcgatc cgtcagttaa cactgatgtt ctcgaagatc gcctttcccg 2581 accaacctgt taaggctggt cagcggagta acggccgtca ggtcgtttcc tccgtacgtg 2641 aaaggcgggc gatgtctgag tatgtccaat gtgagcagga tgttagagca tccgattctc 2701 ttttggattc atcctatttg gatgatttcc gtcgagtttc ggatatgtta tttggtgatc 2761 ttttggccaa ggtggacaga gatgtctact ggggccgttt gatccccaaa catggaccag 2821 gcgctgttgc tgacaaactt tccagtaatg ggaagtggaa tcagcaaacc tggcccgctc 2881 ggttaagcag gtgttttcct gccgaccatt tcctttctcc taatcctcat tttaatgagg 2941 agaagttgaa ggatcttaac atcctcgaac ccggttctga gatacccgtt agggttatca 3001 cagttcctaa gacgctcaag tcaccccgga tcattgccat tgagcctact gctatgcaat 3061 atgcacagca ggcgctcctt ggcgcgatcc ttgacgcgtt taaagaggat ggtttcctct 3121 cgcgcgtgat cggatttgat gatcaggaac ccaatagggt tcttgctcat cgaggttcgc 3181 tcagcggcga cctcgccaca ctcgatttga gtgaggcttc cgatcgtgtc tcgaatcagc 3241 atgtaagggc gatgtgcgag aattatcctc acttgcatga ggctattcaa gcgtgtcgct 3301 ctcaaaaggc tgatgtacct ggttttggcg ttcaacgcct tgccaagtac gcctctatgg 3361 gttcagctct ctgctttcca attgaggcca tggtcttttt gaccttgatc tttcttggaa 3421 tagaaaggga gctaagtgct ccgctttctc ggagacagtg tgtcaagctg ttttccgagc 3481 aggtgcgtgt ctttggagat gatttaattg tccccagaga ctatgtgctg tccgtcgtcg 3541 acgaactaca tacttttggg tatgtagtaa acgccggcaa gtcttactgg accggaaggt 3601 tccgtgagtc ttgcggacgg gagtactatg acggccatga cgtttctatt gtcaaggtcc 3661 gtcaagtact tccgacacga cggcaggacg cgagtggagt tatctctgcc gtcgctctta 3721 gaaaccagct ctattgggct ggaatctgga gtggcgccag atggttggat aactacctca 3781 ggaagttgtt aaagcacttc ccgaatgtag ctccaacctc tccactgttg ggcagggaat 3841 cagctttggg atatgaattc tcaaagctgg atccatacct tcacagcccc ctaaccaagg 3901 gctatattgt gaaggccgaa tccccccggg atcccctgga tgggagcggt gccctcctta 3961 agtgtcttct gcagagagaa tcacggctta gccgtgtgat gcttccgatt aattcggatg 4021 catcctctgc cttcaacact ttgccaagtg ttgatgatga gcacttagag cgttctggac 4081 gccccgagta cgtcaacatc aaactcggga tggcttcacc cttttaaggg tgatggggtc 4141 ttaatgaccc agtgggag //