LOCUS BK013949 4392 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.1_2 genomic sequence, sequence. ACCESSION BK013949 VERSION BK013949.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.1_2 ORGANISM ssRNA phage Gephyllon.1_2 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Yeshinuvirus; Yeshinuvirus humicola. REFERENCE 1 (bases 1 to 4392) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4392) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035531 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4392 /organism="ssRNA phage Gephyllon.1_2" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786119" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Yeshinuvirus; Yeshinuvirus Gephyllon.1_2" gene <1..132 /gene="Gephyllon.1_2_1" CDS <1..132 /gene="Gephyllon.1_2_1" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51898.1" /translation="LSGPSLMPLYSGIGTLCLYRHLGKGALLLDGLLCLSTRYIRLL" gene 147..1520 /gene="Gephyllon.1_2_2" CDS 147..1520 /gene="Gephyllon.1_2_2" /codon_start=1 /product="maturation protein" /protein_id="DAD51899.1" /translation="MPETYTRSENTVIKYWKYTQTYGNFGWTNPTTNGVDLGISKFDS LSGYKNPAHRAQIRAVTSATTLLSGTKTRQLENRPGGASYKLYSPDGRTAFWDMSGCT QGLGSSFLLNALVLPNAAVVTSCHNQAVSKLYGQLNSFVSSAKTGEDWGEWKSTMKTL RSPLKPLRDLITSSHYRSLRDLDRWRDPVKLAGALADTHLEFAFGIAPLESSIAKGIV GLHNRNIMGNYKPFYAKGDVSYSPSTKTQILQADPMNYAQIVLGEKTVWSIQEVFSGV WGEECLLPERPISDVLGLKFRDIVPTVWNLIPYSFLIDYFVNIGQIASALAVPWNGIK WCNYTSRTQGVYEASYSYRMRPGSHIGGMNFGSEPGNFKVLRQIFNRSAQGSMPVPWL EYTKPWQLTGRQWANIAALGISQSAQYLLKLKKAVKRSPELPTVYLRELGQRASMSKV PYPFHRP" gene 1536..2003 /gene="Gephyllon.1_2_3" CDS 1536..2003 /gene="Gephyllon.1_2_3" /codon_start=1 /product="coat protein" /protein_id="DAD51900.1" /translation="MAISLTSPITGAAVTGLTSPTYTVAVDTPPNTWSKQWAVTALGG TQTGVDTSSSASRPFTLTAYRPQSLKTLNTVDSTGVVRVVGFNTYGFLVRKGMTPLAG QASKTSQFRLEASIPAGADTADQPNINAATSCTIGALWQQADGIATTLRTGVL" gene 2177..3979 /gene="Gephyllon.1_2_4" CDS 2177..3979 /gene="Gephyllon.1_2_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51901.1" /translation="MDQRLVALYTELACDLAPYLNRPPVEVNGYGPSSYVKQFAARHL LENVMKKFMAHSKGADEAATQTFLASNKKCERWVNPLTSPNLAEADRQLLGQFSKFME DFFLSYVGEDAELSWVNVCENARSGPGAAIGANGGSFYAKHFSSPLTATSQSLVRLYY AHNALYPEFQIAENIRTLEFGEPRMVSGSRTSFAPKTVDTSRMICVEPGINMYLQLGL GSLIEKRLLRLFSIDLASQPSINRWMAKQGSERPDDEQSFATIDLSSASDSISLMFAR DFIPPEWLSAILELRSPVTKLGNSEVELNMVSTMGNGFTFPLQTAIFCCVAAACSTLS DGSSRAVCLSDLSRDFSVFGDDIIVRRNVSHRVLRLLELLGFTANAAKTFQSGPFRES CGHDYISGHNVRPIFIRKMDTDQDIAVLVNLFNEWSARTGIMLPSFMRKLWSLFKKRP LFVPLAENMDAGVKIPLNLLESLLLEGEKRVGMDENLSICYKRWVGRPPKIRFRDGTV HVPKRQRRLIYNPPGLLQAYLRGEIHRGTISIRANGRLLYDAKRAISPWWDYVPNTHE ELVFGLALDKVQHIAAISANIGHLIRCPQHNQEV" gene 3981..4370 /gene="Gephyllon.1_2_5" CDS 3981..4370 /gene="Gephyllon.1_2_5" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51902.1" /translation="MSIEIVDRPTFYMDAQSFSRPYGGEKGTHGGRLVVVRPETVIQD METVLGLKVCEFDARSVVLHIILRKMDGEAQRISFRAGSYRRLDWGDGKSTAAEVAED LLKAYGYRIKAFWPRKGYYTIYVPSRD" ORIGIN 1 ctttcgggcc catcgctgat gccactgtat agtggtatcg gtaccttgtg cctgtatagg 61 catttaggta agggagcttt gctccttgat ggcttattgt gcttatcgac tcgctatatc 121 cgcttactct agcggaagga ggagttatgc cagagacgta tactaggtct gagaacactg 181 tcattaagta ctggaaatat acccagactt acggcaattt tggatggaca aatcctacta 241 ccaatggtgt agatttgggc atctcgaagt ttgatagctt gtcaggatat aagaatcctg 301 ctcatcgcgc gcaaatacgc gcggtgactt cggctaccac tctgctctca ggcactaaga 361 cgcgtcagct ggaaaacaga ccaggcggtg cctcatataa gttgtactcc cctgatggga 421 ggactgcttt ttgggacatg tcgggctgca cccagggtct cggatcgagc tttttgctta 481 atgcattagt tcttccgaac gctgcggttg ttacctcctg tcataaccag gccgtctcaa 541 agttgtatgg acaactcaac tcctttgtct catcggccaa aaccggtgaa gattggggtg 601 agtggaagtc aacaatgaag acgttaagat cgcctctgaa gccgcttcgc gacctgatca 661 cttcatcgca ttatcgaagt cttcgtgacc tcgatagatg gagagatcca gttaagcttg 721 cgggtgcatt ggcggacacg catctcgagt ttgctttcgg tattgcaccg ttggaaagct 781 cgattgccaa aggtattgta ggtctccata ataggaatat tatggggaat tataaaccct 841 tctatgcgaa gggtgatgta tcctacagtc cttcgacgaa aacacagata cttcaggcag 901 accctatgaa ctacgcacaa atcgtgcttg gtgaaaagac cgtctggagt attcaagaag 961 tgttttcggg tgtttgggga gaagagtgct tgttgcccga aaggccaata agcgatgttc 1021 tcggcttaaa attccgagat atcgtcccca ctgtatggaa tttaattcca tatagcttct 1081 taattgacta ttttgtcaat attggacaga tagctagtgc cctcgcagtt ccttggaacg 1141 gcataaagtg gtgtaattat acttcacgaa ctcaaggagt ttatgaggca tcttacagct 1201 accgaatgcg tcctgggagc catattgggg gcatgaactt cggttcggag cctggtaatt 1261 tcaaagtcct tcggcaaatc ttcaatagat ccgctcaggg cagcatgccg gttccatggt 1321 tggaatatac caaaccatgg caactgacag gcaggcaatg ggcgaatata gcagccttgg 1381 gtattagcca atcggctcaa taccttctta aattgaaaaa ggctgtgaag agaagtcctg 1441 agcttcctac cgtatattta cgggagttgg gtcagcgtgc ttcgatgtcg aaggttcctt 1501 atccattcca tcgtccttaa tagaggtaca tccaaatggc tattagccta accagcccga 1561 ttacgggcgc tgctgttacc ggactgacga gtccgaccta cacagtggcg gtcgacacgc 1621 ctccgaatac gtggtccaaa caatgggctg ttaccgcact tggcgggaca cagaccggtg 1681 tggatacgtc ttcttcggcg tcaagaccgt tcacgctcac cgcttatcgt ccgcagagcc 1741 tcaaaactct gaatacggtc gattcgactg gtgtagtccg tgtagttggg ttcaacacct 1801 acgggttctt ggtccgtaag gggatgactc cccttgcagg ccaggcttcg aagacctccc 1861 agtttcgact ggaggcttcg atccctgcgg gtgctgacac ggccgaccag cccaacatta 1921 atgcggcaac tagctgcact attggagcgc tgtggcagca agcagatggt atcgctacca 1981 cgctgcgaac tggtgtcctc taagtagctt cgtttatgac gaaagctatg aagagtcgca 2041 tcggctctgc tctctttatc atcctttcta tcgtgtttgg gccagatttg gcccgattta 2101 cgattacgag ggtgagcgac cttccttcaa tggatgttcg ctgaagagag acatcaacta 2161 catagtgtga ggtaacatgg accagcgtct cgttgctctt tacacagagc tagcctgtga 2221 cttagcacca tatcttaata gacctccagt tgaggtcaac ggatatggcc catcctcgta 2281 tgtcaagcag ttcgcagctc gacacctttt ggagaacgtc atgaagaaat tcatggcgca 2341 ctctaagggt gctgatgaag cggctactca gacatttctc gcatcaaata aaaagtgcga 2401 gagatgggtt aacccactta cttctcctaa tctagcagag gccgataggc aactgttagg 2461 tcagttctcg aagtttatgg aggatttctt cctctcttat gtgggtgagg atgcagaact 2521 ttcctgggtg aacgtttgtg aaaacgctcg ttcaggaccg ggtgctgcaa ttggagcgaa 2581 tggtggtagc ttctatgcta aacacttcag ctctcctctg actgctacgt ctcagtcctt 2641 agtacgtttg tactatgctc ataacgcgtt gtatcccgag ttccagattg cggagaatat 2701 ccgaaccctg gagtttgggg agccgcgtat ggtaagtggc tctaggacta gcttcgcccc 2761 aaaaacggta gacacgtcac gaatgatctg cgtcgagcca ggtattaata tgtaccttca 2821 gcttgggctt ggatcactca tagagaaaag actacttaga cttttctcaa ttgaccttgc 2881 tagtcaacca tcgattaatc gatggatggc caagcagggc agtgaacgac ctgatgacga 2941 acaatccttc gcaacgattg acttgtcatc agcctctgat tcgatctcgc ttatgtttgc 3001 tagggatttc atacctccag agtggcttag tgccattcta gagctgaggt ccccagtgac 3061 taagcttggg aattcagaag ttgagcttaa tatggtcagt acgatgggga atggttttac 3121 ctttcctctt cagacagcca tattctgctg tgtcgctgct gcatgcagca ctttgtctga 3181 cgggtcttct agggcggttt gtttatcaga cctctctagg gacttctctg tcttcggtga 3241 tgatatcatc gtgcggagaa acgtctccca tagggtgctt cggctgttgg agcttttagg 3301 cttcacagcc aatgctgcaa aaaccttcca gtcaggaccg ttccgcgaga gttgtggcca 3361 cgattacatc agtggtcaca atgtccggcc gatattcatc agaaagatgg ataccgatca 3421 ggatatcgcg gttttagtca acctctttaa tgagtggtcc gcaaggaccg gcattatgct 3481 tccgagcttt atgcgcaagt tatggtctct ctttaagaag aggccactat ttgtgccttt 3541 ggcagagaac atggatgctg gggtgaaaat cccgctcaat ctcctggaaa gccttcttct 3601 tgaaggcgag aagcgggtcg gaatggacga aaacctatcg atttgttaca aacgatgggt 3661 tggtcgtcca cctaagatcc gcttcagaga tgggactgtt catgtcccta agaggcaacg 3721 tcgacttata tacaacccac cagggttgtt acaagcgtat ctcaggggtg agatacacag 3781 aggtaccatt agcatccgtg ctaatgggcg cctgctgtac gacgcgaagc gggccattag 3841 tccctggtgg gactatgtgc ccaataccca cgaggagcta gttttcgggc tagcactcga 3901 caaggtgcag catattgctg cgatctctgc taacatcggt caccttataa ggtgcccaca 3961 acataaccaa gaggtttgat atgagcatcg aaatagttga ccgtcctacg ttctacatgg 4021 atgcccagag tttctctcgt ccctacgggg gcgagaaagg gactcacggt ggcagacttg 4081 tagttgtcag gcctgagact gttatccagg atatggaaac cgtcctaggt ctgaaagtgt 4141 gtgagtttga cgctcgaagc gttgtgctcc atatcatctt aagaaagatg gatggggagg 4201 cacaacgtat ttcgttccgt gctggctcat accgcaggct cgactggggc gacggaaagt 4261 cgaccgcagc tgaggttgct gaggacctgc ttaaggccta tggctaccgt ataaaagcat 4321 tttggcccag aaagggctat tacactatat acgttccgtc acgggattaa ccgtaagcaa 4381 gatggaaagc aa //