LOCUS BK013447 3784 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.1_20 genomic sequence. ACCESSION BK013447 VERSION BK013447.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.1_20 ORGANISM ssRNA phage Gephyllon.1_20 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Puduphavirus; Puduphavirus pedovivens. REFERENCE 1 (bases 1 to 3784) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3784) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-3784 MN034369.1 1-3784 FEATURES Location/Qualifiers source 1..3784 /organism="ssRNA phage Gephyllon.1_20" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786120" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Puduphavirus; Puduphavirus Gephyllon.1_20" gene 55..1197 /gene="Gephyllon.1_20_1" CDS 55..1197 /gene="Gephyllon.1_20_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50157.1" /translation="MVEIRHRERHFSIAAGFATWHDDGLSPAGSSFSIDQYCDDVVGN FKHANYFKSTSKSTKFWTLNGLGDPNGWSYSGFVQYGTPAAPFAPSGPEPDLDALVAR GLALCNPNRPNLDLPVFIKELADFPKMIKTLAKLGSKKFGRRPIRDIAEQHLNNEFGV KLFLADLRRMLNFVDLTEKKFQQLKTMRDNGSYGTTRHHSVWGDKSDGGDFTAYASSL YGEGNQLLVKYSCRRHKWLSTRWVPTGDFTSLTDEQLRNRANRIVYGTDISFATIWEG MPWSWLIDWFSNTGDLVQQWRNTVPLFPVDTCAMQTMSVGIDSCNVFSGPGKDTLVAT GNPDLWVEKLRIPINAGAIGLDAGVPLLGGRQLSILAAVVVTRWSH" gene 1215..1577 /gene="Gephyllon.1_20_2" CDS 1215..1577 /gene="Gephyllon.1_20_2" /codon_start=1 /product="coat protein" /protein_id="DAD50158.1" /translation="MSFAKPLVINYAAGTKTLPMINQDSYGSEYYLRESTQEFRMKIR HSKETPTKTGSQMLRHNVELTRTVFGADGAADVVQQAYLIYRHGYRDDIDDAAELGAS LTGLMVEARFQDLGAWLS" gene 1672..>3784 /gene="Gephyllon.1_20_3" CDS 1672..>3784 /gene="Gephyllon.1_20_3" /codon_start=1 /transl_except=(pos:1672..1674,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD50159.1" /translation="MSSSNNCLAIIDPAECLAALLKDVAATYPTDQLDLLRDSNRVVQ QLKSRGLSFFYKDLPLLAKKLDFSLASGRLDLGGLPHSRGNKPGSKIPRLFKGLWIRI FDDSGCLREDADSTAVYFLRSCLMMFKKLELETSPASLFEAVEDFYNAEETLPATPSI WEDESDFSRENCGHLGDHSHTRSRRDLLSRISGENRTDHLLDSCQRIADRISATLGWF NPSDVVGKHGPGAVSKLPDTKYKYHFARWSQQLEALFPLDVFARANLSMVEDAEAEYP VTFEAEASRLCSVPKTALGPRLIAAEPLSNQWIQQGVARYLCRRVKRSLLGQVISFDD QTLSGDFALEASATGRHATVDLKSASDKLSCYAVQRLFRANISLLGMMKACRTIFMTS DLDPRKPNLLRLKKFATMGSALTFPIQSVVFAMISLGVGSFRNPHLSLRSLCKDVRVF GDDIIVPVDWVDDLTAVLTALRLEVSTTKTFATGNFREACGVDAFRGVNVTPARISSL KRLALTPSETMALIDTANNFHMKGMWRVSEFLIRTVPQIQNVPVVDVLGGASGLFTFN FNKGGRYDGQSDTTNRLTCRPSEGDHTRKYPRYAYVLSGQGTSKVRLRVNYDLQRYEV LVSTPFAKEKPGTLWPDGPSRMLEYLSSSFTRPAADFPSDGSEDVLGGVFSALRGKGD RIRHLESKRSIGGRLSSRPSRL" ORIGIN 1 cccagcctgc tgaactttgg tttggctatc cctcttagag accggagtta gatcatggta 61 gaaatacgtc atcgagaacg tcacttcagc attgcggcag gttttgccac atggcatgat 121 gacggtctca gtccggccgg tagttctttt tctatcgacc agtactgtga tgatgtagtc 181 gggaacttta agcatgcgaa ttactttaag tcgacctcaa agtctactaa attttggact 241 ttgaacggct taggtgatcc gaatggctgg tcctattctg gattcgtcca gtatgggact 301 ccagctgcgc cgtttgcgcc ttcaggcccc gaacctgatc ttgatgccct ggtagcccgc 361 ggccttgcat tatgtaaccc gaatcgtcca aatttggact tgccggtttt cataaaggaa 421 ttagcggact tccctaagat gattaagacg ctagctaagt taggcagtaa gaagttcggt 481 agacgcccga ttagggacat tgccgaacaa catctgaata acgaatttgg cgtcaaactc 541 ttcttagcgg acctgcgtcg tatgctcaac ttcgttgatc tgacggaaaa gaaattccaa 601 cagctcaaga cgatgagaga caacgggtcc tatgggacaa ctcggcacca tagtgtgtgg 661 ggtgataaaa gcgatggcgg tgatttcacc gcctacgcct cgtccctcta tggcgaaggc 721 aatcaacttc tagtgaagta ttcatgccgt cgtcacaagt ggctctcaac tcgttgggtg 781 ccaactgggg attttacctc actcactgac gagcagctac gtaaccgtgc aaatcgcata 841 gtttatggaa cagacatttc cttcgccact atttgggaag gaatgccatg gtcctggttg 901 atcgattggt tttccaatac tggggactta gtccaacagt ggaggaatac cgtaccgctc 961 ttccccgtag atacttgtgc aatgcagacg atgagcgttg gcatagattc atgcaacgtt 1021 ttctccggac ccggtaagga cactcttgtc gctaccggga atcccgacct ttgggtcgag 1081 aagctccgga ttcccatcaa tgcaggtgct attggtctcg atgccggcgt ccccctactt 1141 ggggggcgtc aactgtccat actggcggcc gtggtggtca ctaggtggtc ccactaaccg 1201 acaggaatac ttcgatgtct ttcgcaaaac cactcgtgat taactatgcg gcggggacta 1261 aaacccttcc catgattaat caggactcct acggctccga atattacctt cgcgagtcta 1321 cccaagagtt tcggatgaag atccggcact cgaaggagac tccgacgaag accggttcgc 1381 agatgcttcg acataatgtc gagcttacac ggaccgtgtt cggtgcagat ggagctgccg 1441 atgtcgtgca gcaggcctac cttatttaca ggcatggcta tcgcgacgat atcgacgacg 1501 cggccgagct tggtgcttcc ttgaccggac ttatggtcga ggctcgcttc caagatctcg 1561 gtgcgtggct ttcctaatca gaaagccagt agtcgctaat cactgaaaga tacagtggtt 1621 agctggttgg cgaaaggcga ggttcgaacc taacaaaaag gagtaatcct agtgtctagc 1681 tcgaataatt gcctcgctat catcgatcct gcagagtgcc tcgctgcctt gttgaaagac 1741 gtggcagcga cttacccaac agaccagttg gacttattgc gagatagcaa tcgcgtagtc 1801 cagcaactaa agtcgagagg tctgagtttc ttttacaagg acctcccact actcgcgaag 1861 aaattagatt tttcgcttgc tagtggccgt ctagacctgg gtggtttgcc tcattcaaga 1921 ggaaacaagc caggttccaa gatcccaaga ctattcaagg ggttatggat acggatattc 1981 gacgatagtg gttgcttaag agaggatgcg gactcgactg ctgtctactt tttgagatca 2041 tgccttatga tgttcaagaa gttagaactg gagacctctc cggcctcttt atttgaggct 2101 gtggaggact tctataatgc agaagagacc ttaccggcga cccccagtat ctgggaggac 2161 gaaagcgact tttcaagaga aaactgtggt caccttggtg atcatagtca cactcggagt 2221 cgtcgcgatc tactctccag aatctctgga gaaaatcgca cagatcatct tctcgattcc 2281 tgccagcgca ttgctgacag gatctctgcg actcttggat ggttcaatcc atccgatgtc 2341 gtaggtaagc acggaccagg ggctgtgtcg aagctaccgg atacgaagta caaatatcac 2401 ttcgcccggt ggtctcaaca actcgaagct ctcttccctc tggacgtgtt cgcgagagcg 2461 aacctgtcca tggtcgagga cgccgaagct gaatatcctg tgacatttga ggcggaagcc 2521 tcacgactct gttctgttcc aaagactgct ttaggtccgc ggcttattgc cgcggaaccc 2581 ctgagtaatc aatggatcca gcagggtgtc gcgagatacc tctgtcggcg tgtgaagcgt 2641 tccctactgg ggcaagtcat ctcctttgat gatcaaaccc taagcgggga cttcgcacta 2701 gaagcatcag ctactggacg tcacgccaca gtcgacctaa agtcggctag tgacaaatta 2761 tcttgctatg ccgttcagcg tctcttcaga gcaaatattt cgctcttggg gatgatgaaa 2821 gcatgcagga cgatctttat gacgtccgat ctggacccgc ggaaaccaaa cttgcttcgt 2881 ttgaagaagt ttgctaccat gggctcagcc ctgactttcc cgatacaatc tgtggtattt 2941 gcaatgattt ccttaggtgt tggttccttc cggaacccgc acctgtcatt gcgcagtttg 3001 tgtaaggatg tccgcgtctt cggggacgat attattgtcc ccgttgactg ggtagacgat 3061 ctcaccgcgg ttcttaccgc gttgagactt gaggtttcta ctaccaaaac cttcgcgact 3121 ggaaactttc gcgaagcgtg cggtgtggat gcctttcgtg gtgtaaacgt tacacctgcg 3181 aggatatcca gcctcaagcg tttggcactc acgccatccg agactatggc acttattgat 3241 accgcaaaca actttcatat gaaaggaatg tggcgtgtgt cagagttcct gattcggaca 3301 gtaccccaga tacaaaatgt acctgtggta gatgtcttgg gtggtgcatc tggcctattt 3361 acctttaact tcaacaaggg aggccgttat gacggtcaat ctgatacgac taaccgactt 3421 acgtgccgtc caagtgaagg agatcatact cgaaagtatc ccagatatgc ctacgtcctt 3481 tctggacaag ggacatctaa ggtacgcctt cgagttaact atgatctaca aaggtatgaa 3541 gtactcgtta gtactccttt cgcaaaggag aaacccggta ctttatggcc tgatggcccg 3601 tcacgtatgc ttgaatacct ctcgagttcg ttcacgcggc cggctgcgga ttttccgtca 3661 gacgggagcg aggatgttct cgggggagta ttttcagccc tacgaggaaa aggggacaga 3721 attcgtcatt tggagtctaa gcgctccatc ggaggaagac tgtcttcccg tcctagtaga 3781 ttag //