LOCUS BK014026 4060 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.1_4 genomic sequence. ACCESSION BK014026 VERSION BK014026.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.1_4 ORGANISM ssRNA phage Gephyllon.1_4 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Hohrdovirus; Hohrdovirus pedenecus. REFERENCE 1 (bases 1 to 4060) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4060) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035932 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4060 /organism="ssRNA phage Gephyllon.1_4" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786130" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Hohrdovirus; Hohrdovirus Gephyllon.1_4" gene <1..1673 /gene="Gephyllon.1_4_1" CDS <1..1673 /gene="Gephyllon.1_4_1" /codon_start=3 /product="maturation protein" /protein_id="DAD52178.1" /translation="GLPQGFDPHMFYEYRYLSNLKTATGLEALLLKYIPWSVHKSFVF AIDPLRDFKVAPHRITPKNRQRKSAVVSVLTSQRKRTNNFRATSHSQTPNYNGISVCW SPGRIERLDASATQVAALTTQPALTQEINDTTRRTRLIGSEQGTMDSFQGFMSSPARR VDKVNRYDYIYHPAAGIPSSDCTARGGDANRGSDSIDLWWSDIGPTAAVLFPSTLNNL RTSELAYLENLISRNVLAMFKDWSPNRRDYTLFRNVVELRDVPRSINSLNDTLRNFRS LFVSLGTKPKLRDSVFDLRKVGGNIPSEYLSYHFGWKQLYKDLMDLLALPEKMSKKYA FLIKRAGKPTTFRTKRNFLSALSEGVSGFDYDTSPYESGVTSTHRLERETELRLVINA TFDFPPPDAVSLKVKSFLDQIGAVPRPTDLYNLIPWTWLIDWFTGLGNYVEVIDNINR DTTLINWGMITGQTKGRLVTNFKSKSDRLVVTTEDFVGRSEVLTYAENNHTSFYQYEC RIRKDAATALSVNTTSDPRLSVYQKSILGALLAQRLDHTTPRTFRPRG" gene 1699..2064 /gene="Gephyllon.1_4_2" CDS 1699..2064 /gene="Gephyllon.1_4_2" /codon_start=1 /product="coat protein" /protein_id="DAD52179.1" /translation="MLADPVTVTAASPTPALTLGIVKSDGYGTVRLDGVNGYSVVTNH SYLKGGGDKHYLQMTKSVIAADPLTGLNGRQTASVSITIVRPKFGFDDTAMVALTTAL RDYLYDSEVTPAKILQFQS" gene 2334..>4060 /gene="Gephyllon.1_4_3" CDS 2334..>4060 /gene="Gephyllon.1_4_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52180.1" /translation="MKSTIALLRSLLDDFKRLNPGVKGLDRDLITIEKRFENEGFGFL AKALPMLDEALLLGLSSHQFTCPVGFKPVKGGTIPRFLSGMFCEVFDPFTGTLKEAPD FGVLKSLRLLLRFFKKTQVSAEDEDILHQKAVNEFYQCDERASRVLIPDRHDHLIGRV CKILLNSLNSKEVHHGKYKHGPGAVYEGYKANEKFAALWESIRSDDPLLHRLGLWGTG SDTLFSFDHLEETGPCEDSARSADLIRSVFPESLPRSKPGTSHSNIRESIRPTRRRSG GSPSFVDRASRGIARLISVPKNSSSRRTITVEPMLYQFVQQGLNILLRDSISECRILR NCLALSDQSKNQVLALEGSRFDNWATIDLKSASDLLSVSLVKSVFRHNPQFLEDMMAC RSPFVESPNRETLTLGKFAGMGNALTFPVQSICFAVVCLAAIMDTEGTTPSYWRLRRA SRHIRIYGDDIIVSKRYAHQCVAWLQEVGLKINLKKSFLEGNFKESCGVDAWRGVDIT PHYLKHHPDSTATSPNVLAGFVALSNHMWLDGLYSASTWLQEFVEEAIGSRLPLVSRD SGSFGWVSRT" ORIGIN 1 gcggattgcc gcagggtttc gatcctcata tgttctatga gtatcgttac ctatccaatc 61 taaagactgc aactggtctt gaggcgttac tccttaagta cataccttgg agtgtccata 121 agtcgttcgt ttttgcgatc gacccattga gggacttcaa ggtggcacca cataggataa 181 cgccaaagaa ccgtcaacgc aagtccgccg ttgtctctgt tttaacctca cagagaaaac 241 gaacgaacaa tttccgggcg acttcgcatt cgcaaacccc aaattacaat gggattagcg 301 tctgttggtc accgggacgc attgaacggc tcgatgcttc tgcgactcaa gtggctgctc 361 ttacgacaca gccggctcta acgcaggaga tcaacgacac gacccgtcgt actcgcctca 421 ttggatctga acagggaacc atggattcgt tccaaggttt catgtctagt ccagctagga 481 gagtggacaa ggtcaatcgg tacgattaca tttatcaccc tgctgcggga ataccgagtt 541 cagattgtac cgcgagaggc ggagacgcca atcgtggttc tgactcgata gacctgtggt 601 ggagtgatat cggaccgaca gctgcagttc tctttccatc aacgttgaac aacttacgta 661 cttcggagct tgcatatctc gagaacttaa tttctcggaa tgtgctcgca atgtttaaag 721 attggagtcc aaatcgtagg gactacactc ttttccgaaa cgtagtcgag ttacgagatg 781 ttcctaggag tatcaatagt cttaatgaca ctctgcggaa ctttcgtagc ttgttcgttt 841 ccctcggtac caaaccaaag ttgcgtgatt cagtgtttga tttacgcaaa gttggcggta 901 atatcccaag tgagtatctt tcttatcact tcggatggaa acagttgtat aaagacttga 961 tggacttgtt ggcactcccg gagaagatga gcaaaaagta tgcttttcta atcaagagag 1021 cggggaaacc aacgacgttc aggactaaga ggaacttcct ctcggccctg tctgagggtg 1081 tctccggatt cgactatgac acatcaccct atgagtcggg ggtaacctcg actcatagat 1141 tggagagaga gaccgaactt cgcttagtaa ttaatgcgac gttcgatttt ccgcctcccg 1201 atgctgtttc cttaaaggtc aagagctttc ttgaccaaat tggagcagtt cccaggccca 1261 cggatctata taacttgatc ccatggactt ggctcatcga ttggttcacg gggttaggga 1321 attatgttga agttatcgac aacataaatc gcgataccac gttgatcaat tgggggatga 1381 ttaccggcca aacgaaaggt cggttagtca cgaacttcaa gtcgaaatcc gatcggctag 1441 ttgtaaccac ggaagacttc gtgggtcgtt ctgaggtact tacgtacgct gagaacaacc 1501 atacgtcgtt ttaccaatac gaatgtcgta ttcgtaagga cgcagctacc gccttgagtg 1561 tgaacactac ttctgacccg agattatcgg tatatcagaa gtctatcctc ggggcacttc 1621 ttgctcagag gctagatcat actactccta ggacattccg tcctaggggg taatcaattt 1681 gtccacaagg agacgtctat gcttgccgat ccagtaaccg ttaccgcagc gagtcccaca 1741 ccggctttga cgcttggaat cgtcaaatcc gatggctatg ggacagtgcg tctggacggt 1801 gtcaacggat attccgttgt caccaaccat tcgtatctga agggcggcgg agataaacac 1861 tatctccaga tgaccaaatc ggtcatcgct gccgaccctc tcactggatt gaatgggagg 1921 cagacagcct ccgtttcaat cactatcgta cgtccgaagt tcggtttcga cgacaccgct 1981 atggtggcgt tgacgaccgc gcttcgggat tatctgtacg atagcgaggt tacgcccgcg 2041 aagattctcc agttccagtc ctaatccatg cttaaccaaa ctcatgggtc gtccctttcg 2101 ggacggttca ttagtgaggc aggcgtggac tgggttgggc tggtgaatgc ttttggagac 2161 cacgactgga gtttcattgg tgctatggcc cttttgggcc tagtcgccat tgctatctcc 2221 agaagtcgtt aacgaacatc ttcccagatg tccgcggatg agtgcctatt aaccctggca 2281 ctcggaagag cttatagact cgtaatgtac cacctttgta acaaaggagt cacatgaaaa 2341 gtacgatagc tctcctacga agtctcttgg atgatttcaa gagactgaat cctggtgtga 2401 aaggcctcga tcgtgatcta attacgatcg agaagaggtt cgaaaacgag ggctttggct 2461 tcctagccaa agccttaccg atgttagatg aagccctact attggggtta tcgtctcatc 2521 agttcacctg ccccgttggc tttaaaccag tcaaaggggg aacaatcccg agatttctct 2581 caggtatgtt ctgtgaggtt ttcgatccgt tcaccgggac gcttaaagaa gcacctgatt 2641 ttggtgtcct taagagtcta agactactct tgagattctt taagaaaact caagtatctg 2701 cagaagatga ggacattctt catcagaagg cggtgaacga gttttaccag tgtgatgagc 2761 gtgcaagtag ggttcttata cccgacaggc acgaccatct cattggtcgt gtttgtaaga 2821 tccttctaaa ctccctcaac tctaaggaag tccatcatgg aaaatacaaa cacggtcccg 2881 gtgctgtcta cgaaggttac aaagcgaacg agaagttcgc cgctttgtgg gaatccatca 2941 gaagtgatga tcccctactc catcgactcg gtctatgggg aacgggtagt gataccttgt 3001 tctccttcga ccatctcgag gagactggcc cttgtgaaga ctctgctaga tctgcagatc 3061 tcatacggtc agtctttcca gaaagccttc cccggagtaa accgggaacg agccactcga 3121 atattcgtga gagtattcga ccaactcgca ggcgttctgg tggtagtccc tccttcgtgg 3181 acagagcttc gagaggcatt gcgagactaa tatccgttcc gaagaattct tcttcgagac 3241 ggacaattac ggttgagcca atgctgtacc agtttgtaca gcaggggctt aacatcctac 3301 ttagagatag tatctccgaa tgtaggatct tgcgtaactg tctcgcttta tccgaccaga 3361 gtaagaacca agttcttgct ttggaaggct cccgtttcga caactgggca accatcgact 3421 tgaagtcggc gtctgacttg ctgagtgttt cactcgtcaa gtcggtattc cgacataatc 3481 ctcaatttct agaggatatg atggcttgcc gttctccctt cgtagagtct cctaaccggg 3541 agaccctcac tttagggaaa tttgccggaa tggggaacgc cttaaccttc ccagtgcagt 3601 caatctgctt cgcggtagtc tgcttagcag ctatcatgga tactgagggt acaaccccca 3661 gttactggag gttaagacgc gcctctcggc atatccgcat ctatggtgac gatattatag 3721 tctccaagcg gtatgctcac cagtgtgtgg cctggcttca agaggttggc ctcaaaatca 3781 acctcaagaa gagtttcctt gaaggaaact tcaaggaaag ctgtggtgtt gacgcatggc 3841 gtggagttga tataactcca cactatctta aacaccatcc agattctacc gctacaagtc 3901 caaacgttct tgctggcttt gtcgcactgt ctaatcacat gtggttagac ggtttatact 3961 ctgctagcac ctggttacag gagtttgtgg aagaggccat aggaagccgc cttccactcg 4021 tatcccgtga ttcgggctcg tttgggtggg ttagtcgtac //