LOCUS BK013885 3708 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.1_9 genomic sequence, sequence. ACCESSION BK013885 VERSION BK013885.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.1_9 ORGANISM ssRNA phage Gephyllon.1_9 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Lehptevirus; Lehptevirus chorohabitans. REFERENCE 1 (bases 1 to 3708) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3708) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN033700 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3708 /organism="ssRNA phage Gephyllon.1_9" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786135" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Lehptevirus; Lehptevirus Gephyllon.1_9" gene 19..207 /gene="Gephyllon.1_9_1" CDS 19..207 /gene="Gephyllon.1_9_1" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51662.1" /translation="MDIDLHRKLAIDVYNMLVAQLNERGILIDTLSSEQLSALNIADI ESLNRRYQSILRNPTPRG" gene 262..1500 /gene="Gephyllon.1_9_2" CDS 262..1500 /gene="Gephyllon.1_9_2" /codon_start=1 /product="maturation protein" /protein_id="DAD51663.1" /translation="MEVTLTTIDSRITYPYYLKHYYVSDNAPSPTYVDNASFDRTFGS GVNRVTGTSDPSWRIKIAKKQNASSSYFRSDIDGSIKPIRGRCIERSTAVLHRKSYTY DCRWLGPVPTSFASFSADSTLDDIALKRLKNKIASHESHFNSLLPLAELHELRKTFRD SVDLTIDFLGVVADIRKTKGRSAAKYLSKAWLTYGFGIAPVISDVSKLANTISEYILR TDHTAILTGQSSRDWTTGRRQVNPLDSPRPMTGCDLDVHSVLNHSLSYMYKGGFNFSL ASSSDYGAARQFGLRLENLVPTAWELIPFSWVIDYFTTVGDYLDDTFIGTPVKLLYLN QTRRYQCSGTNRMNLVYSSPTTVTGLQPTPGVTNWRYGEFQRTVLSTLPHRIMRLRTI DEVGLHSLNKLFNLISILAK" gene 1552..2019 /gene="Gephyllon.1_9_3" CDS 1552..2019 /gene="Gephyllon.1_9_3" /codon_start=1 /product="coat protein" /protein_id="DAD51664.1" /translation="MSFAPSTPVTGAAVAVFTSPTYTITADVAPSINGKQYAVTALGG TQANVDVNSVSKPFTISFFRPVVLRTLPQANPVTGIIKNVPMNTYKLITRKGAQPAAS QVNMTARITTTIEVPAGTDTYEPEEIKAMISAHFGTGWAQASGIADTVTTGVL" gene 2049..3659 /gene="Gephyllon.1_9_4" CDS 2049..3659 /gene="Gephyllon.1_9_4" /codon_start=1 /transl_except=(pos:2049..2051,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD51665.1" /translation="MRNNAGNAGDKLNSLFTAMLEDLNDKSPEDAPRAFAVARQVQRM RKRAKSDDRDLHLRAIADFISCNSLVGDTVVSLSEDVITEAARYIEHVLERFTTSLDE TNIQQSFDPSYLESNWKFGPGASNGVKGTHTAEKIVQNMTCTILCKPLVTALRGSNSY FQLNDERNGNDGTTAVRGSRLATVPKNETTNRTIAIEPSGNMALQLAAGSYIEGALRM IGLDIHTQQPKNKAMAKRGSIDGSIATIDLKSASDMFTPFLIRKLWPRRWYRLLSAIR SDEIDTGDSGWIKMNMISTMGNGFTFPLMTLSIVALIYAYRRLKGGPNLFIDWSSTCV FGDDIIIPVSEYEGVVSVLSAAGLVVNNDKSYCSGPFRESCGGDYFEGYDVTPFYVRS LDSDAAVYVAINQVFEWSARHNLLLHRTLNLLRSFIAGKVHLVPEWHNPDEGVLTASV QGRYTYLQRLVERRIHKRGPYDYPLAVGGYLVPGNPDNFFTPRLFKQRWRVRKSRLPN GYLDGADPVKRSACITHFVSAYSFLFEV" ORIGIN 1 ccttcctaag gagtgatcat ggatatagac cttcaccgta agttggctat cgatgtttac 61 aatatgcttg tcgcgcagct gaacgagcga ggtatcttaa ttgatacttt gagttcagaa 121 caactgagcg ccttgaacat tgctgacatc gagtcgctta atcgacggta tcagtctata 181 ctccgtaatc ccactcctcg ggggtaatta tgaacggttg ttttacggcc ttcttttcaa 241 aaggtcggca tatgccatac tatggaggta actttgacta cgatagattc acgaatcaca 301 tatccgtatt acttgaagca ctactacgtt tcggacaatg cacccagtcc tacttatgta 361 gataatgcgt catttgatcg gacgtttggt tcgggtgtca atcgggtcac tggtacctct 421 gatccaagtt ggcgtattaa aattgcgaag aagcaaaatg cttcaagctc ttactttaga 481 agcgacatcg atggtagcat taagccgatc cgcggaaggt gtattgagag gagtactgcg 541 gtccttcacc gaaagtcata tacttatgac tgtcgctggc tgggccctgt accaacctct 601 tttgcatcct ttagtgctga ttctacgctt gatgatatcg ctttgaagcg tctcaagaac 661 aagatcgctt cgcatgagtc tcacttcaac tccctcttgc cattagctga gttgcacgaa 721 ttacggaaaa ctttccgtga ttctgtcgac ttgactattg acttcttggg cgttgtcgca 781 gacattcgaa aaacgaaagg acgctctgcg gccaaatacc tttctaaggc atggctgacg 841 tatggtttcg ggattgctcc cgttatatca gacgtctcta agttagctaa tacgatctct 901 gagtatatac tcaggacgga tcatacagct atcttgactg ggcagagctc aagagactgg 961 actaccggtc gaagacaagt gaaccctctc gattcaccca gaccaatgac tgggtgtgat 1021 cttgatgttc attctgtctt aaatcatagt ctgtcttata tgtacaaggg aggttttaac 1081 ttctcccttg cctcgtcttc cgattacggt gcagctcgac aatttggatt gaggcttgag 1141 aacctagtgc ctacggcatg ggaactcatc cctttttctt gggttatcga ctacttcacc 1201 acagtcggtg attatttaga tgacaccttc attggtactc ctgtgaagtt gctctatctt 1261 aatcaaacgc ggcgttatca atgctccggt accaaccgca tgaatctcgt ctattcgtcg 1321 ccgacgaccg taacaggtct tcaaccgacg ccaggcgtga caaattggcg gtatggagaa 1381 tttcaacgta cagtcctttc gacccttccc cacagaatca tgcgtctccg tacaattgac 1441 gaagtgggtc tacacagctt aaataagctg ttcaacctga tttccattct cgccaagtga 1501 tgctatttct atggcataac tgagtttgga gattcgtatt aggagacatt catgtctttt 1561 gctccatcaa cacctgtaac aggcgcggcg gtggcagttt tcacgtcacc gacgtacact 1621 ataacggctg acgtcgcccc tagtattaac ggcaagcaat acgccgttac tgctttgggt 1681 ggcactcagg caaacgtaga tgtgaattct gtgagtaaac cattcacgat ttcattcttt 1741 cgtcccgttg tgcttcgtac gttgccgcag gcgaaccctg taaccggcat catcaagaat 1801 gtgccaatga acacctacaa gttaattact cgtaagggtg ctcagccggc cgctagccag 1861 gtaaatatga ccgctcgtat cactacgacg atcgaagtac ctgctggcac ggacacatat 1921 gaacctgagg agattaaagc catgatcagt gcgcacttcg gcactggttg ggcccaagct 1981 tcgggcatcg ccgatacagt aacaaccggc gtcttgtaaa cctcccaacc ctcatctgga 2041 gatatcttgt gagaaataac gctgggaatg ccggtgacaa gctgaatagc ctgttcaccg 2101 caatgctaga ggatttaaat gacaaatcac ctgaagatgc tcctagagca ttcgcagttg 2161 cgcgtcaagt gcaacgcatg cgtaagcgtg cgaagtctga tgaccgggac ctccacctta 2221 gagctattgc tgattttatt agctgtaact ctttggttgg cgatactgtt gtcagtcttt 2281 ctgaagatgt gattactgaa gctgctcggt acatagaaca tgtactcgag cgcttcacca 2341 cgtccttgga tgagacgaac atacagcagt cgttcgatcc ctcatatctt gagtctaatt 2401 ggaagtttgg ccctggcgct agtaatggcg ttaagggtac acatactgcc gagaagatag 2461 ttcaaaatat gacgtgcact atcctttgca agcctctcgt aacagccctg cgtggtagta 2521 attcctactt ccagctcaat gatgagcgta acggaaatga tgggaccacc gcagtgagag 2581 gttcgcgtct agcaacagtt ccgaaaaacg agaccactaa tcgtaccata gcgatcgagc 2641 catccggtaa tatggcgctg cagcttgctg cagggtctta tatcgaaggt gctcttcgca 2701 tgattggctt ggacattcac acgcaacagc ctaagaataa ggctatggcg aaacgcggtt 2761 ctattgacgg tagtatcgct actatcgact taaaatccgc atccgatatg ttcacgccgt 2821 tcttgatacg taagctctgg ccacgtcgat ggtatcgact cctctctgct attcgcagtg 2881 atgagataga tactggcgat agtggctgga tcaagatgaa tatgatatcg acaatgggga 2941 acggttttac cttccccctt atgacattat caatagtcgc cttgatctac gcgtaccgtc 3001 gactcaaggg gggccccaat ctgtttattg attggagctc aacatgtgtt ttcggtgacg 3061 atataatcat acccgtttct gagtatgaag gtgtcgtaag cgttttgagc gcagctgggc 3121 ttgttgttaa caacgacaag tcctactgca gtgggccttt ccgcgaaagc tgcggtggag 3181 attatttcga ggggtatgat gtcacaccct tctacgtaag atcacttgac agcgacgcgg 3241 ccgtctacgt tgctattaat caggtcttcg agtggagtgc aaggcataat ttgcttttac 3301 accgcactct taacctgctt aggagcttca tagccggtaa ggttcatctc gttccggagt 3361 ggcataaccc tgatgaaggg gttcttactg cttcggttca gggacgctat acatacctgc 3421 agcgtttggt ggaacgtcgg atacacaaac gtggtccata tgactatcca cttgctgtag 3481 gcgggtatct cgtacctggc aaccctgaca atttcttcac gcctcgactg tttaaacaga 3541 ggtggcgagt caggaaatca aggttaccga atggttatct tgatggcgcg gatccagtga 3601 aacggtctgc gtgcattact cacttcgtgt ctgcttactc ctttcttttt gaggtgtagg 3661 ttgatgggtt gtgtggcgac tccgaaagtg gagtagcaca aaaggggc //