LOCUS BK014039 4058 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.3_2 genomic sequence, sequence. ACCESSION BK014039 VERSION BK014039.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.3_2 ORGANISM ssRNA phage Gephyllon.3_2 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Pihngevirus; Pihngevirus choradaptatum. REFERENCE 1 (bases 1 to 4058) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4058) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035104 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4058 /organism="ssRNA phage Gephyllon.3_2" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786159" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Pihngevirus; Pihngevirus Gephyllon.3_2" gene 95..328 /gene="Gephyllon.3_2_1" CDS 95..328 /gene="Gephyllon.3_2_1" /codon_start=1 /product="hypothetical protein" /protein_id="DAD52222.1" /translation="MTLKTQIIRDGVSNDSFDSLSDYLSFEITSISKDMRRVVVRLFV DDHLHACSPGIEVSVNDIDRFVNSWQALWSCRV" gene 406..1656 /gene="Gephyllon.3_2_2" CDS 406..1656 /gene="Gephyllon.3_2_2" /codon_start=1 /product="maturation protein" /protein_id="DAD52223.1" /translation="MSVTKTADIYHDLGRSSIVKTGSGEPSPGPPVFTSSIVKTTKTK THDGPVRDFRRRISSCLPASTNFVGSEVNHIFDKGHCKSVTRNKGLNTYLWLEHYGEL TQISTPPIISVSGTKADDLSKMKFVQAIRSAQTTCQGGVILGEIGETLHMLRNPAKAL RRGFDNYFTALKKRRRGNQATRKKILAETWLEHSFGWQPFLHDIKDSVAALERIAYTA RSPTIYVRGFGGDKIDRGTTFLRNVAPTGNSNLSYDVQIHEYTDAIVIRRGAVRAPIG SRLSSIKNDFGFTLNNFVPTIWELVPWSFAVDYFTNIGDILSSWSLWNADLAWSNKTT VTNVNLDRVSGGLNGITLAADQEIVIRSKEPGRSSSYRRSVVRGTSAGSLIPSLRFEI PGMSSLKWINLSALALSRKRLTPY" gene 1674..2141 /gene="Gephyllon.3_2_3" CDS 1674..2141 /gene="Gephyllon.3_2_3" /codon_start=1 /product="coat protein" /protein_id="DAD52224.1" /translation="MTWSPSSPVTGGAQTGFTSPTYTLTTDIAPDVNGKQHAVTALGG TQTGVRSHSVSDPFTVTFMRPKNPRVLPNANPVTGKYSQIPRNTYAMIVRKGVNYAAN QAPDVCVARLTIDVPAGSDNYDAANVRALCSIIAGILSQQSAGAGDSLVTGIL" gene 2306..4027 /gene="Gephyllon.3_2_4" CDS 2306..4027 /gene="Gephyllon.3_2_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52225.1" /translation="MGICPKALYRNLIDDLKGRFGASFVDDFSALDVPSPTFSTKEVA AFSIYRSLLKKYEVRNTDMLDSKALLKFLQINSDCENWSLQLSSSWDEVLIGELKSAL YKFFNPEGYPLVTSYDQIFHYGRTGPGAAIGAKGGDFYTKMFASPLSCTRQGLYKMYR NYIKNFPEWTNAENIRQAHFGEAHVVSGSRFSFVPKNDQISRTICVEPSLNMFAQLGL GHIIEKRLLDAYGISMSTQPYKNRELARRGSLGLGFVTCDLSSASDSLSLRMLKEVLP HDIYNTLRYLRSDTTEIPGLGTTELHMVSTMGNGFTFPLQTVLFSAVVVAAARARDIE LRFPRGQDFGTWGVFGDDIICPEKIWPDVNRLLALLGFKVNHDKTFVEGPFRESCGAD YHVGVNVRGVYVKRLESQQDLCSVVNQLNLFSTRTGVFLPKTCAALLTKVRWQPVPRW ENSDAGIHVPLSMVSGSLLFSENGSALYRRYEPIGLKARILESSVVVPRYAKPRIYNP SGLLMSFLQGSINSFSIGVRQDPVRYKRKLGVAPYWDATPTTHPSSRGSIGSGGKPLF TLTFLVK" ORIGIN 1 agatgtacag taatgtatgt cctctgtggg agtaacgaga tccttaaatg ggctctcttt 61 cattaccatc ctaactcatt tcatcgaggt atttatgact ctcaagactc agattattcg 121 agacggcgtt tcaaatgatt cattcgattc gctatccgat tacctgtctt ttgagataac 181 atctatctcg aaggatatgc gtagggtggt tgtaagactg ttcgtggatg accacttgca 241 tgcttgcagt ccagggatcg aggtatcagt taatgatatc gaccgattcg tgaacagctg 301 gcaggctttg tggtcgtgcc gcgtttagtc ttatttgtgg tgcctgttac ataaaggtat 361 cacattttaa cgggcttagc ccgtcttttg tgaggtgtta accatatgag cgtgaccaaa 421 actgccgata tataccatga tctcggaaga agcagcatag ttaaaactgg gtcaggggag 481 ccttctcccg gtcctcctgt gtttactagt tcgatagtga aaactaccaa gactaagaca 541 catgatggtc cggtgaggga ttttcgccga cgcattagta gctgtttgcc cgcttcaacc 601 aacttcgttg gttctgaggt taatcatatt ttcgacaaag gtcattgcaa atcggtaact 661 cgaaataagg gtttaaatac ttatttgtgg ttagaacact atggtgagct gactcaaatc 721 agcacgcccc cgatcatttc agtatcgggc acgaaagctg acgacctgtc taagatgaag 781 tttgttcaag ctatccggtc ggctcaaacc acctgtcaag gtggtgtaat cctaggagag 841 attggggaaa cacttcatat gcttagaaat ccggctaagg cactccgccg agggtttgac 901 aactacttta ccgctctcaa gaagaggcgg cgtgggaatc aagctactcg aaagaagatc 961 ttagcagaaa cctggctaga acattcgttt ggttggcaac ccttcttaca cgacatcaaa 1021 gattcggtag ctgctcttga acgtatcgcg tacaccgccc ggtccccaac tatctatgtt 1081 aggggattcg gtggtgacaa gatcgatcga ggcactactt ttctgagaaa cgtcgctccg 1141 acgggcaata gcaacctttc gtatgatgta cagattcacg aatataccga tgcaattgtt 1201 atacgccgag gagccgtgcg cgccccgata gggtcgcgtt tatcgtctat aaaaaacgat 1261 tttggcttca ctttgaataa ctttgtaccg actatttggg agcttgtacc ctggtcattt 1321 gcggtggatt atttcaccaa tattggtgat attctttctt cttggtcact ctggaatgct 1381 gatttggcgt ggtccaataa gacgactgta acgaatgtca accttgacag agtttcaggc 1441 ggtcttaatg gaattacgct tgcagcagac caggaaatcg tgattcggtc gaaagaaccg 1501 ggtcgttcct cctcttatcg caggtcagtg gtccgaggta catctgctgg tagtctcatt 1561 ccctctttga ggtttgagat tcccgggatg tcttctctga agtggattaa tttatccgct 1621 ttggcactgt ccaggaagag gcttacacct tactaacctt ggagttttta ctcatgactt 1681 ggtctccttc gtcacccgtt acgggtgggg ctcagacggg ctttacgtcg ccaacttata 1741 cgttgacaac ggatatcgcc cctgatgtga acggtaaaca gcacgctgtt accgctttag 1801 gcggtacgca aactggtgta cgttctcatt ctgtgtccga cccattcaca gtgactttta 1861 tgcgtccgaa gaaccctcgg gttcttccaa acgcaaatcc tgtgactggc aagtactcac 1921 agattccccg caacacgtat gctatgatcg tgagaaaggg cgtgaattac gctgcgaatc 1981 aggcgcccga tgtctgcgtg gcacgtctta ctattgacgt gcctgcaggt tcggacaact 2041 atgacgcagc gaacgttcgc gccctctgct caatcatcgc cggcattctg tctcaacaga 2101 gcgctggcgc tggagattcc cttgttaccg gcatccttta aagatagggt gcaggttctt 2161 ggggtcttgc tattctttat ttatatcttc atcgaagcta ttaaaggcaa cgatgtcggt 2221 attgacaaag tctggcaata tcttcggcac cttgaaaagg gtgtcggatg agctctcacg 2281 taacatacgt tagcaggtaa tctctatggg tatttgcccg aaagctcttt accgcaatct 2341 gatcgatgac ttgaaaggtc ggtttggtgc atcttttgtt gatgattttt cagcattaga 2401 tgttccctcg cccacctttt cgaccaaaga ggtggctgct tttagcatat atcggtccct 2461 tctcaaaaaa tatgaggtta ggaataccga catgctggat agcaaggcac ttctcaagtt 2521 cttacagatc aactctgact gtgagaattg gtccttacag ctctcttctt cttgggacga 2581 ggttcttatt ggagagttaa aaagcgctct ctataagttc ttcaaccctg aagggtaccc 2641 cttagtaaca tcttatgacc agatcttcca ttacgggaga actggcccag gtgctgcgat 2701 tggggcaaag ggaggtgact tctatacaaa gatgttcgcc tcccctctta gctgtactcg 2761 tcaaggcctg tacaaaatgt acaggaacta cattaaaaac tttcctgagt ggaccaatgc 2821 tgaaaatatc agacaggccc atttcggtga agctcatgta gtttcaggta gtcgctttag 2881 ttttgttccg aagaacgacc aaatctctcg tacgatttgt gttgaaccta gtctgaacat 2941 gtttgctcag ttaggtctcg gccatatcat cgaaaaaagg ttgttagacg catatggaat 3001 atccatgtct actcagcctt ataagaacag agagttagcc agacgcggga gccttggtct 3061 agggtttgtc acttgtgact tatcctcggc ctcggactct ttatctcttc gtatgctgaa 3121 agaagttcta ccgcatgata tttataatac cttgcgatat cttcgatcag atacaactga 3181 gattcctggt ctgggtacta ctgagttaca tatggtcagt acgatgggga atggttttac 3241 ctttcctctt cagactgtat tgttctcagc ggttgtcgtg gctgctgcga gggcgcgtga 3301 cattgagtta cgtttccctc gtgggcagga ctttgggacc tggggcgtgt ttggagatga 3361 tatcatctgt ccagaaaaaa tctggccgga tgtaaatcgt cttctagcac tccttggttt 3421 caaggtcaac cacgataaga cctttgtaga aggtccgttc cgtgaatctt gcggagccga 3481 ctatcatgtc ggagtcaacg ttcggggtgt ttatgtaaaa cgcctcgaaa gtcagcaaga 3541 cttatgctct gtagttaacc agcttaatct gttctctaca agaacaggtg ttttcctacc 3601 taagacttgc gctgctttac taacgaaagt tagatggcag cctgtccctc ggtgggagaa 3661 ctcagatgcg ggtatccacg tacctctctc gatggtttcg ggatcgctct tgttttctga 3721 aaacgggagt gctctttata ggcgttatga acctataggc cttaaggcca gaatcctcga 3781 gtcttcagtc gtggttcctc gatatgctaa gccgcgaatc tataaccctt ctgggttatt 3841 gatgagcttt ctgcagggat cgattaactc tttctctatc ggggtcaggc aagatcccgt 3901 tagatacaag aggaaactag gtgttgctcc ctactgggat gcaacaccga cgacccaccc 3961 ttcttcgcgt ggttcaattg gcagcggtgg gaaaccgctg tttactttaa cctttttggt 4021 taagtaaatc cccggggtga gatgcccctc ctctcatg //