LOCUS BK013924 3901 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.3_3 genomic sequence. ACCESSION BK013924 VERSION BK013924.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.3_3 ORGANISM ssRNA phage Gephyllon.3_3 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus arvivivens. REFERENCE 1 (bases 1 to 3901) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3901) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035658 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3901 /organism="ssRNA phage Gephyllon.3_3" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786160" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Gephyllon.3_3" gene 74..1339 /gene="Gephyllon.3_3_1" CDS 74..1339 /gene="Gephyllon.3_3_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51804.1" /translation="MPQGTTTRKRKQGETRKTYVYFVNPPAKPSLSVSGSYDHRGTQI TTSEGHPWPPPNGASGDLGGAFYTSRQYVEGSPFHYDTATRHPFGNQIYYSYSGPFRV SDIVGGVNNGVLPFPADGASTDATLRSLGTTAIARCEPTNSLSDLSTFVGETYKDGLP YVPLTRVMESRINAARLAGEEILNVGFGWLPFLSDLTSFSKVVSKHAEVISQYERDSG KVVRRSYRFPSTHEESESIYATNVGLGYAAGTTNVLDDSSHRGSVVRKVETSRDRWFS GAFTYHLPSELDSRSALGNAAQEAEKLLGSPLSPETLWNLTPWSWAIDWFTNAGDYLH NLGAYATQGLVMRYGYMMEHTIVKHTYNHVGGSGISGKPDMTVPPLVLVTETKKRIQA NPFGFGLTWDGLSPFQLSIAAALGLSRSG" gene 1396..1758 /gene="Gephyllon.3_3_2" CDS 1396..1758 /gene="Gephyllon.3_3_2" /codon_start=1 /product="coat protein" /protein_id="DAD51805.1" /translation="MAFADPQTVTISAVTTPLPRTSTGQNESTYTSADGLIDLSASSA YGRRTRRVLRIDHSKVTSDPFIPAQNVKVSMSNYIVFDMPVAGYTNAEALAVYTGFKT QFTASSDLLITKLLGGES" gene 2035..3858 /gene="Gephyllon.3_3_3" CDS 2035..3858 /gene="Gephyllon.3_3_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51806.1" /translation="MKSLMLLWKTLAYECASICCTSATQDYKIVLRRCEHEGLSFLTI TLPEFGKDLQKGLDRGQVDRDLFTGFRWRAGLPLFLGGFLDRVFDRASGTLLDEPCID AIRAMRQLTLMFSKILLPCSDTRVRASMRDYVECEQMVKSADNARTDLDRDRFRRISD LLFRPLFSDMEVKLYKGEVVPKHGPGATADKLSGNSKYLLSTWTDRLEEVFPAGEFLI PNWSFFDQYTDVVHLEPGAEKPVRVIPVPKTQKAPRIIAIEPTAMQYAQQGVLELFLE ALRRKTSKGRFRFDSLNHFLGFDDQTPNQEMAKEGSRTGNLATLDLSEASDRVSNQLV RDLFANFRYLHAAVDASRSRKADVPGQGIVRLSKFASMGSALTFPVEAMVFLTIIFIG IERELNVPLDHKTVKRFREQVRVYGDDIIIPVDYVQSVVRELETFGFQVNTGKSFWTG KFRESCGRDYYSGHDVSVVKVRQLFPTQRQHATEVISIVSLRNQLYFAGYWATVEWLD EYIKKVIRHFPHVLPSSPVLGRHSFLGYQAERTDEFLHSPIVKGYVISAVPPSDVLDG YGALLKFFLKRGDVATADERHLRRAGRPHVVKIKLRWASAV" ORIGIN 1 cgagaggcgc agccgcacgc agtgcaacat ccacccacac tggtaacagt gtgaatagaa 61 gaaggagctg tagatgccac aaggcacgac gacccgtaaa cggaaacagg gtgagactcg 121 gaagacttac gtttatttcg taaatcctcc ggccaaaccc tcactttccg taagcgggtc 181 gtacgaccat cgtgggacgc agattactac gtcggaaggt catccttggc cgcccccaaa 241 tggggcgtcc ggggatctag gaggggcgtt ttacacgtcc cgccagtacg tagaaggaag 301 tccattccac tacgatactg ctactaggca tccctttggg aaccagatat actactcgta 361 ttctggtcct tttagggtta gcgacatagt cggcggcgtc aacaatggcg tgttgccctt 421 tcctgcggat ggtgcatcaa ccgatgcaac ccttcgtagt ttaggaacaa ctgccattgc 481 tcgatgcgag ccgactaact ccctgtctga tctatctacc ttcgttggag aaacatataa 541 ggatggtttg ccttatgtgc ctcttacgag ggtaatggaa tccagaatca acgccgcccg 601 tttggcggga gaagaaattc tcaatgttgg ttttggatgg ctaccattcc tgtctgacct 661 tactagtttt agtaaggtcg tctctaaaca tgctgaagta atatctcagt atgaaagaga 721 ttcagggaaa gtagtccgta gatcatacag gttcccgtct acacatgagg agagtgaatc 781 catctatgct acaaatgtag gcctcggcta tgccgcaggc actacaaatg tgctagatga 841 ctcttctcat aggggatcag ttgtacggaa ggtggagacc tcccgtgata gatggttctc 901 cggtgcgttc acatatcatt tgccgtccga attagactct cggtcggcac ttggtaatgc 961 ggcgcaagaa gctgaaaagc ttctcggttc cccactatct ccagaaacac tctggaacct 1021 gactccctgg agctgggcca ttgactggtt cacgaacgcg ggagattatt tgcataatct 1081 cggtgcgtac gcgacccagg gcctggttat gcgttatggg tacatgatgg aacataccat 1141 cgtgaaacat acctataacc atgttggggg ttccggaatt tccggaaaac ccgacatgac 1201 tgtaccccca cttgttctcg ttacagagac caagaagagg atacaggcta accccttcgg 1261 atttggattg acgtgggacg gcttgtcacc gttccagctt tccatcgcgg ccgctctcgg 1321 cttaagccgg agtggctagc ggttgtaccg ccaaacacca tgcgaacatg atgttcgtag 1381 aaagagagca cgcctatggc gttcgccgat ccacagactg tcactatcag tgcagttact 1441 actcctctgc cccgtactag tacgggtcag aatgagagta cctacacctc agctgacggt 1501 ctgattgatc tcagcgcttc ttccgcctac gggcggagga ctcgccgagt tctccggatc 1561 gatcactcga aggtgacctc agatccgttt attcctgcac agaacgtgaa ggtttcgatg 1621 tcaaattaca tcgtcttcga catgcctgtt gcagggtaca cgaatgctga ggctctcgct 1681 gtttacacgg gttttaagac ccagtttaca gcgtcttcgg atctgctgat tacgaagctc 1741 ctgggaggcg agagctaggc caaaatggct tagctttcgt aactcctatg ggttacgtat 1801 cagaacagag gttgcacaat cgtcaggtta cggaacagag aattgaattt ctgctgttct 1861 gtgccttcgc ggttgtcagc cttcagatca tttcgatcgt cttgatgctt atttgcatca 1921 tgtcgttcga ttaagtgatc gtgttggggg gagaggggac atgaagtcct ctctccttac 1981 cagctcacgt gaacaccggg ctaaggaaag accacctcta tttaaggagg ggctttgaaa 2041 agcctgatgt tgctctggaa aacgctagca tacgaatgtg ctagcatctg ttgcactagc 2101 gccacccagg actacaaaat agtcctgcgt cggtgcgaac atgaggggtt atcatttctc 2161 acgataaccc tacctgaatt cggaaaggac ctccaaaaag gtctagaccg aggacaggtc 2221 gatcgcgatc tcttcaccgg ttttcggtgg agagcaggtc tccccctatt tctaggaggt 2281 ttcctcgatc gtgtgttcga ccgtgctagt ggcacgttgc tcgatgagcc gtgcattgat 2341 gcaattcgtg ctatgcgtca gttaacactg atgtttagca agatccttct cccttgtagc 2401 gatacaaggg tgagggcttc gatgcgcgac tatgtcgagt gtgagcagat ggtcaaaagt 2461 gccgacaatg cccggaccga tctcgataga gatcgcttca ggcgtatatc ggaccttctg 2521 tttaggcccc tcttctctga tatggaggtg aaactctata aaggagaagt agtacctaaa 2581 cacggaccag gggcaacggc agataagttg agtggaaact caaagtattt gctgtcaacc 2641 tggaccgatc ggttggaaga ggtttttccc gctggggaat tccttattcc aaactggtca 2701 ttctttgacc agtataccga tgttgtccat ctcgaacccg gtgcagagaa acccgtgagg 2761 gttatccctg tacctaagac gcagaaggcg cctaggataa tagcgataga acctactgct 2821 atgcaatatg cacagcaggg tgttcttgag ctattcctgg aagcccttag aaggaaaact 2881 tctaaggggc gatttaggtt tgactcccta aatcacttcc tcggattcga tgaccagact 2941 cctaaccagg agatggccaa agagggttcc cgtactggga acttggcaac actcgatttg 3001 agtgaggcct ccgatcgcgt ctcaaatcag ctcgtacgtg atctgttcgc caatttccgc 3061 tatttgcatg cggcagttga cgcttccaga tcacggaagg ctgatgttcc tggacaaggt 3121 attgttcgcc tgtccaagtt cgcgtctatg ggttcagctc tcacgttccc cgtcgaggcg 3181 atggtcttct tgaccatcat ctttataggg atcgagcgag agctcaacgt gccccttgat 3241 cacaaaaccg ttaaacggtt tcgtgagcag gtgcgtgtct atggagatga cataattatc 3301 cccgtagact atgtgcaatc cgttgtccgt gagcttgaaa cttttgggtt tcaggtcaac 3361 acgggcaagt ctttctggac tggaaagttc agagagtctt gcggaaggga ctactactct 3421 ggccatgacg ttagtgttgt caaggtcagg cagttgttcc cgacacaacg gcagcacgcc 3481 actgaggtca tctctattgt atcccttcgt aaccagcttt attttgctgg ttactgggcc 3541 acagtagagt ggcttgatga gtacataaag aaagtgattc gtcattttcc gcatgtactg 3601 ccatcatccc cagtgttagg tcgtcattcc ttcctcggct accaagccga gcggactgac 3661 gagtttctgc atagcccaat tgtcaagggc tatgtcatat ccgccgtacc accatccgat 3721 gtattggatg gctacggtgc cttgcttaag ttctttctta agcgtggcga tgtcgccaca 3781 gctgatgaga gacacttaag gcgtgctgga cgcccgcatg tcgtcaagat caaactgcgg 3841 tgggcctcag ccgtgtaaat ggctgagggg gggcaaaatg ccctttgagg agatactaca 3901 c //