LOCUS BK013864 3863 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.3_9 genomic sequence. ACCESSION BK013864 VERSION BK013864.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.3_9 ORGANISM ssRNA phage Gephyllon.3_9 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Lomnativirus; Lomnativirus arvihabitans. REFERENCE 1 (bases 1 to 3863) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3863) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035828 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3863 /organism="ssRNA phage Gephyllon.3_9" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786166" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Lomnativirus; Lomnativirus Gephyllon.3_9" gene <1..1498 /gene="Gephyllon.3_9_1" CDS <1..1498 /gene="Gephyllon.3_9_1" /codon_start=2 /product="maturation protein" /protein_id="DAD51593.1" /translation="REQLHRQSRPRDGFVRTVGVRHRLPRVPRYRYWEAPTLVGGRIT QPSGFVDEHYDVLKEWLYEELLVSQDHRRLPGGSWSGGGPLFVWSARVRHYNPLALDF VRWGNHTRSSLLGVDPVWPMFGGKPPDPDAIRPSWVEQQLILLAYGPEAYRRTRPGNP LADLGQTIGELPEGLPKVPFRSLVRWPKIRSLAGVPFSRWGRALYNRLREFVRIEHRL GTREFLRQVTKFKPGGEYLNVVFGWQPLVRDLVSAYELSQRLESELSRLIRENGKGVH RRTTLEKKKTTEDLSVGPSSFGPWPPYTFVRGGEYGIYGYGVDGSSTHRCVRTVEERV WFSGKYRYFIPDVKSPVWRARAVAALYGALPTPSLLWELMPLSWLLDWFVNFGDVIAN VSTNAVDNLVLEYGFLMRHRTEHIEASAHVAHTAGELPGYQQWPAIDHTFRSVYQAES KARAGCDPFFPGAQPWVFHTDSPALELPFTNRQWAVLASLGLSRGFNR" gene 1512..1910 /gene="Gephyllon.3_9_2" CDS 1512..1910 /gene="Gephyllon.3_9_2" /codon_start=1 /product="coat protein" /protein_id="DAD51594.1" /translation="MSFPDPLAIGDDGVAKNLHRIGTTAIESTYRLDDAGVIHTLLLS HDFAGVGTSRKAKAGAGSQIQRAIMRYERAYLSPDPLLTGQNQRVVVAATLTMTWPTI ITALDASKRGLTIAGLATDTVLLRLAQGET" gene 1984..3843 /gene="Gephyllon.3_9_3" CDS 1984..3843 /gene="Gephyllon.3_9_3" /codon_start=1 /transl_except=(pos:1984..1986,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD51595.1" /translation="MKSLVGLFVTLLKDLGEQCGADGAGRDERSLLSRVEHEGMSFLT ISLPAYASAFERALEVGTAAPWASTGFARQRSGVPRFLAGFLRHVFDKSGRLLDDPSI DCIRAVRQLCRFAKSVNLPCSTARQAHAIEAYVQCDAEVQEFSDEEDGSIVQAFRRVG AIVSADLELDEAQEAFKPVHGSGAVRERLTINERWARMPYWPRRLDDVGLTARMAFFG HEEPLFGLEFEEESAWFPDSVSPEHETPVKVTLVPKTLAKPRVIAIEPAAQQFAQQGV SRWFRGVLERHALTSGRVNFYDQDVNRSLALVESERRRMATLDLSEASDRVGLWHVRQ AFSSSPDFLRTLMACRTERALLPSRREVRPLRKYASMGSALCFPVEAYIFFLSIIAAR LQQSSLPVTRRTIAEKAKDVYVYGDDLVVPVDEAPAIIAGLEALGFKVNARKCFWTGK FRESCGMDAYDGHEITPVYLRRLPPSDRADVSGILSAVSTANQLHKLGLYRTRDRLRQ AVERLLGPLPGDCPEGSPVVGWVFPSSGEPDRRWDFDLQRERKLCWTVIAPRVPDPLE GFGALAKCIRTREERAERTLAETLGWEMVLSAWEEHLTSSVRPYALKLKRRWL" ORIGIN 1 ccgggagcag ttgcatcgcc aaagccgtcc tcgcgacggt tttgtccgca ccgtgggcgt 61 gagacatcgg ttgcctcgcg tcccacggta tcggtattgg gaggcgccta ccctcgtcgg 121 ggggcggatc acccagccta gcggattcgt tgatgagcac tacgatgtgc tcaaggagtg 181 gctctatgag gagcttctgg tttctcaaga ccatcgccga ctccctggcg ggagttggtc 241 aggtggtggc ccgctgtttg tgtggagtgc gagagtacgc cattacaatc cgctggcact 301 ggacttcgtg cgttggggga accatactcg atcgtcgctt cttggcgtcg atccggtttg 361 gcccatgttc ggcggcaagc cgccggaccc cgacgcaatc cgtccaagct gggtagagca 421 gcagctcatc ctgcttgcgt acggacccga ggcgtaccgg agaacgagac ccgggaaccc 481 tctggccgac ctcggccaga caattggtga gctccctgag ggcctgccga aagttccatt 541 ccggtctctc gttcggtggc caaagatacg atctttggcc ggcgtcccct tctcgcgttg 601 gggacgtgcg ctgtacaacc gtttgagaga gttcgtccgt attgagcaca gactcggtac 661 gcgcgagttc cttcgccagg ttacaaagtt caaacctggg ggggagtatc tcaacgtcgt 721 gttcgggtgg caaccgctcg tccgggacct tgtgtcggct tacgagctgt cccaacgtct 781 cgagtctgag ctgtcccggc tcatccgtga gaacgggaaa ggagtgcatc gaaggaccac 841 gcttgagaag aagaaaacca ccgaggacct ctctgttggt cctagctcgt tcggtccctg 901 gccgccgtac acgtttgtgc gtggcggtga gtacgggatc tacggctatg gcgtggacgg 961 gtcgtccacc caccggtgtg tcaggaccgt ggaggagcgg gtctggttta gcggaaagta 1021 ccgctacttc attcccgatg ttaagtcccc tgtctggcga gcccgggccg tcgccgccct 1081 ttacggggcg cttccgacgc cgagcctgct atgggaactc atgcccctgt cctggctcct 1141 tgattggttc gttaacttcg gcgacgtgat tgccaatgtt tcgaccaatg ctgtcgacaa 1201 cctggtgttg gagtacggtt tcctcatgag gcaccgtacc gagcacatcg aggccagcgc 1261 ccacgtggcg cacacggccg gtgagctccc aggctaccaa cagtggccgg cgatcgacca 1321 cacgttccgt tcggtctacc aggctgaatc taaggcgcgt gccggctgcg atcctttctt 1381 tccaggcgca cagccgtggg tgtttcacac agattcaccc gccctggagc tgccgttcac 1441 gaatcggcag tgggctgtac ttgcatccct ggggctgtcc cggggattta accgataggc 1501 ggagacccta tatgtccttt ccggacccac tcgcgatcgg tgacgatgga gttgcaaaga 1561 acctccatcg catcgggacc acagctattg agtcgactta cagactcgac gatgcgggcg 1621 tgattcacac gcttctgctc tcccacgact tcgcgggagt cggtactagc cgcaaggcca 1681 aggccggtgc tgggtcccag atccagcgag cgatcatgcg ctacgagagg gcttacctct 1741 cccctgatcc gctcctcacg gggcaaaatc agagggtggt ggtcgctgcc acgctcacca 1801 tgacgtggcc gacgatcatt accgcgctcg acgcgtcgaa gcgggggcta accattgccg 1861 gtctcgcgac cgacacggtc ctcctcaggc tcgcccaagg cgagacctaa agtggtcccc 1921 atgggttgcg tggggtcctg ccagggcaac cagatcgagt acctcctata aaacggggga 1981 gtcgtgaaaa gcctggtggg tctgttcgtg acgctcctca aggatctagg ggagcagtgc 2041 ggagccgacg gcgcgggccg cgacgagagg tcgctgcttt cgcgtgtcga gcacgagggg 2101 atgtcgttcc tgacgatctc cctacctgcc tacgcgagcg cctttgaacg ggcactcgaa 2161 gtgggcacgg cggcgccttg ggcatcaacg ggcttcgccc gccaacgctc aggagtcccc 2221 cggtttttag ccgggttcct ccgccacgtg ttcgacaaat cgggtcgact gctggatgat 2281 ccctcgatcg actgtatccg agcggtgcgg cagctatgcc gcttcgcgaa gagtgtgaat 2341 ctaccgtgct caacggcccg gcaggctcac gcgatcgagg cttacgttca gtgtgatgcg 2401 gaagtccagg aattctccga tgaggaggat ggatcgattg tacaggcttt caggcgggtt 2461 ggcgcaatcg ttagcgccga tctcgagctg gacgaggccc aagaggcctt caaacctgtg 2521 cacggttctg gtgcggtgcg ggagcggctc accatcaacg agaggtgggc gcgcatgccg 2581 tactggcccc gaaggctgga tgatgtcggg ctcactgccc gcatggcgtt cttcggacac 2641 gaggaacccc tctttggact cgagttcgag gaggaatcag cctggtttcc tgactccgtg 2701 agtccggagc acgagacacc tgtgaaggtg actctggttc ctaagacctt agcgaaaccc 2761 cgagttattg cgattgagcc ggccgcgcaa cagttcgcgc agcaaggcgt ctctcgctgg 2821 ttccggggcg tccttgagcg ccacgcgctc acgagcggtc gtgtgaactt ctacgaccag 2881 gacgtcaatc ggagcttagc actcgttgag tccgagcgcc gccgcatggc gactctcgac 2941 cttagcgagg ctagcgacag ggttggactt tggcacgttc gtcaggcgtt tagctcttcg 3001 cctgactttc tgcgcacgct catggcgtgc cggacagaac gtgcgctgct tccgagtcgc 3061 cgcgaggtgc ggccgcttag gaagtatgcg tcgatgggct cagcgctctg ctttccggtg 3121 gaggcgtata tattcttcct ttcgattatc gccgcccgcc ttcagcagag tagtcttccc 3181 gtgacaagac ggaccatcgc cgagaaggcg aaggacgtct acgtctacgg ggacgacctc 3241 gtcgtcccgg tggatgaggc tccggcgatc atcgctggcc tggaggccct aggcttcaag 3301 gtcaacgccc gtaagtgctt ctggactgga aagttcaggg agtcctgcgg gatggacgcg 3361 tatgacggcc acgagatcac acccgtgtac ctccgtcgtc tgccgcccag tgatcgcgcc 3421 gatgtgtctg ggatcctttc tgccgtgtct acggccaacc agctgcacaa gcttgggctg 3481 tatcgaacgc gggaccgcct aaggcaagcg gtcgagaggt tgcttggtcc attaccaggt 3541 gactgcccag aggggagccc cgtggtcggt tgggtctttc ctagcagcgg agagcccgat 3601 cggaggtggg atttcgatct tcagcgtgag cgaaagcttt gctggaccgt catcgcgcct 3661 cgtgtgccgg acccacttga ggggtttggt gcgctagcga agtgcattcg aacgcgcgaa 3721 gagcgggccg aacgcacctt ggctgaaacg ctggggtggg agatggtcct ttctgcgtgg 3781 gaggagcact tgacatcgtc ggtgaggccc tacgccctca aactaaagcg taggtggctg 3841 taacggttac agctcaaccc gac //