LOCUS BK014018 4493 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.4_1 genomic sequence. ACCESSION BK014018 VERSION BK014018.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.4_1 ORGANISM ssRNA phage Gephyllon.4_1 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Weheuvirus; Weheuvirus geocola. REFERENCE 1 (bases 1 to 4493) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4493) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034590 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4493 /organism="ssRNA phage Gephyllon.4_1" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786167" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Weheuvirus; Weheuvirus Gephyllon.4_1" gene 152..1621 /gene="Gephyllon.4_1_1" CDS 152..1621 /gene="Gephyllon.4_1_1" /codon_start=1 /product="maturation protein" /protein_id="DAD52152.1" /translation="MSQPRYRFRVTSLDTVVKGTASWNSPIPLGYFEDQSTDYFLGIP VTSWGLPYNAQSYVPQVSACKVEQTWDELHPRAKGKRTTKFTDVGDAPWYDSGGPFLN VKIETGLPTEGVVGSGMYYNLSGTQRYIGGFMTPPNEFWGSGWAETPLAFTGYSNALL PDVAAYFDRAWRQAKPKLEFANLYVFLREIGDTVPMLQTTAKNFAFRYKDTTKLIKVD TDFGSKYITKGALLRPKMGPKTVAENFINHEFGWRPFLGDIQDFARVYVDASELIKKI TDENGKWVRKSVGVTKADDSRVISEVTLPHSSLSYALPCFPVGFPASFFVTPPSYKIV EREILSIHAAGKFRFYRPDFDVTLPDYSSAWHNVTRAMKIFGAEINPYHIWQAIPWTW LVDWVSNLGSFIQRMSDTIEDQVAASYFFITAHKRIERTMTINLPFASGLKTLVFTRS YSAKQRVSADSPYGFRVFWNDLSPERLAILASLGIVRRS" gene 1721..2071 /gene="Gephyllon.4_1_2" CDS 1721..2071 /gene="Gephyllon.4_1_2" /codon_start=1 /product="coat protein" /protein_id="DAD52153.1" /translation="MLTDPQTIVVAGVTKSLPKTSSKDQSSTYNTADLAYTLKISHNV SGQKIRSVERTDYRALVTDPVSGDTDWQVLSVYTVIERPITGFSATQVSDLLAGHQAR MDSTHIAKLYGGES" gene 2076..2255 /gene="Gephyllon.4_1_3" CDS 2076..2255 /gene="Gephyllon.4_1_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD52154.1" /translation="MTYSDKQLSSRERALNAITDWLILNDIEAPAEFAEMLLDRLLLF VREGTVLAIFRDGEL" gene 2384..4429 /gene="Gephyllon.4_1_4" CDS 2384..4429 /gene="Gephyllon.4_1_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52155.1" /translation="MSDVNDYLEVMDVVYRDACIKCSADVFDLRDLETIRSRVEKEGL SFLTIVLPQFAKAFERSLADGNIDSKCFSGFNKCLLRDEQGKPVGHGAIPAFLQGMLS QVFDRKTGEIITYEPPNTNTNGVRGAASDIPTVVESIRQVCRVFAKVELACTPKRVRA ALDSFMEIEQDLQTFSVPAEDEAKFLAASRLLWDNMVSDFSVTTVQPKHGPGATAERI SGNQKYVWRRWHDRLEPYLPLIGNGYPLGLPEHSEELEIVTIVPEYDEQPVRVITVPK TLKSPRVIAVEPVCMQYVQQGIRSYLYRRIESYWLTRNRINFRKQSINQRQALLGSRK GRLATIDLSEASDRVPLGLAIRMFDASPDLKDSILACRSTRAQLPDGRFIDPLLKFAS MGSALCFPIEAMYFYTACVVAMLESTGLSYTQRNIRKVTRKVYVYGDDIVVPSANADV VLETLRKYNCKVNVNKTFCTGMFRESCGVDAYAGYEVTPTYIRQPRPKNKQQHKEIVS WCATANLFYLKGYWRTSTLLFKILEKYTGPLPYVRETSPLLGRYSYLGYESVGRFAAP SPFVPFDRDDWERRSANRDYSKIPNPTKPYYQTPEVRGWKPSPVYRSDELDGWAALTK CLSSKREIWRSDTTDLVRHFSARTSLEEIAASDLSHLDRSALHGAVTLKLRWALAHY" ORIGIN 1 tcgagggcac cttgagacgt cagggatgat gtcttactga aacaatgtga ttgcagaaag 61 tacaggattc gggcgcttag tccgttaccc tgacctagca gttgactgtt ttagtctaaa 121 tcacattctg ctgtaaggat ggaatttgct tatgtctcaa cctcgatatc gattccgtgt 181 aacctccctt gacaccgttg tcaagggcac ggcttcctgg aattcgccca ttcctttggg 241 ctactttgaa gatcaaagta ccgattactt cctcggaatt cctgtgacat catggggctt 301 gccctataat gcacaatcgt acgttcctca agtttctgct tgtaaagtcg agcagacgtg 361 ggatgagtta cacccccgcg ccaaaggaaa acgaactacg aagttcaccg atgtcggtga 421 tgctccgtgg tacgattctg gcggaccttt cttgaacgta aaaattgaga ctggactccc 481 cactgaaggg gtagtcggat caggcatgta ttacaatctc agtggcaccc agcgctacat 541 aggagggttt atgactcctc cgaacgagtt ctggggttcg gggtgggcgg aaactccgct 601 tgccttcact ggatattcaa atgcattatt gcctgatgtt gcggcgtact tcgacagagc 661 ttggcgacaa gccaagccta agttagagtt cgcgaacctc tatgtcttcc ttcgagagat 721 tggagacacg gttcccatgc tgcaaaccac agcgaagaat tttgcatttc gctataagga 781 caccaccaag ctgataaaag tcgacacaga ttttgggtcg aagtatatca ctaagggtgc 841 tctcttaagg cccaagatgg gacctaagac agttgcagag aactttatca accatgaatt 901 tggttggcga ccgttcctcg gcgacatcca agattttgct agggtgtacg tcgatgcttc 961 cgagctcatc aaaaagatta ctgatgagaa cggtaagtgg gtacggaagt ctgtcggagt 1021 gacaaaagcc gatgattcgc gggttatctc tgaggtgaca ctgccgcaca gctctctgag 1081 ctatgcgttg ccgtgttttc ctgttgggtt ccctgcgagt ttcttcgtta ctcccccgtc 1141 gtataagatc gtagagcgag aaatcctctc gatccatgcg gccgggaagt ttcgatttta 1201 tcggccagat tttgatgtga ccctcccgga ttattcctcg gcgtggcaca atgtcacgcg 1261 tgccatgaaa atctttggcg cggagatcaa tccatatcac atctggcaag caattccatg 1321 gacttggcta gtcgactggg tgtcaaattt gggcagtttt atacagcgca tgtctgacac 1381 tatagaagac caagtagctg cgtcctactt tttcatcact gcacacaaac gaatcgagag 1441 aacgatgaca atcaatctcc ctttcgcgag tgggctaaag actcttgttt ttacgcgtag 1501 ttatagcgcc aagcaaagag tcagtgctga tagtccttac ggttttcggg tgttctggaa 1561 cgatttgagt ccagaacgtt tagcgatctt ggcatctttg ggcatcgtga gacgctcata 1621 accgagatct atcctctagc tcttctacca gtttgttctc ctggaaaaag aacggacctg 1681 agctaggcta acttccaaat acttctggag agtcaaccat atgcttacag atccacaaac 1741 aatcgttgtc gctggtgtca ctaagtcttt gccaaaaact tctagcaaag accaatcctc 1801 cacttacaac acggcggatc tggcctacac gttgaagatt tctcacaacg tttctggtca 1861 gaagatccgg tcggttgagc ggacggacta tagggcctta gtaaccgatc ctgtcagtgg 1921 cgacactgac tggcaggtac taagcgttta cacggtgatc gagcggccca tcactgggtt 1981 ctcggccact caggtaagcg acctacttgc aggccatcag gcccgcatgg acagcacgca 2041 catcgcaaaa ctgtacggag gtgagtcgta gaaatatgac ctactccgac aaacaactta 2101 gctctcgaga gagagcgctc aatgcaatta cggattggct cattcttaac gatatagaag 2161 ctcctgctga gttcgcagaa atgctactcg acaggttact tctgttcgtc agggagggca 2221 ccgtgctcgc catctttcga gatggtgaat tgtaagagtc gttgttctat tgcgacgttg 2281 tatgacgtgc aagcgtgatt gttggtgggg cacttcggtg ctccactctt catttagcat 2341 atggctcgta actcgacctt tcagtttaga agggcggttt taaatgagcg atgtaaatga 2401 ctacttagag gtgatggacg ttgtctatag agacgcgtgc atcaaatgtt ccgctgacgt 2461 ctttgattta cgtgacctgg aaacaatcag atcacgagtc gaaaaagaag gattatcatt 2521 tttaacgata gtcctccccc agtttgctaa ggccttcgaa aggtccctgg ctgatgggaa 2581 tattgactcg aaatgctttt caggttttaa taaatgcctg ctcagagatg agcagggtaa 2641 acctgtaggg catggagcaa tccctgcttt tttgcaaggt atgctcagtc aagttttcga 2701 cagaaagaca ggagagataa ttacctatga acccccaaac accaatacaa acggtgtccg 2761 aggcgctgcc agcgatattc ctactgttgt tgaatctata cgacaggtat gtcgtgtgtt 2821 cgcgaaagtg gaattggcct gtacccccaa aagggttcgg gccgcgcttg acagcttcat 2881 ggaaattgag caagatttac agacgttttc agtgcctgcc gaggatgaag ccaagttttt 2941 ggcagcttct cgtttgctct gggataatat ggttagtgac tttagtgtta caactgtaca 3001 gcccaagcat ggaccaggcg caactgctga acgcatctct gggaaccaga aatacgtttg 3061 gcgacgttgg cacgatcgtc tcgagccata cttacctctt attggcaacg gctacccgct 3121 agggttgcct gagcattcgg aggagctcga aattgtaacg atcgttccag agtacgatga 3181 gcaacccgtg agggttatca ccgtgccaaa aacgcttaaa tcaccccgag taattgctgt 3241 cgaaccagtc tgcatgcaat atgtgcagca aggtattcgg tcctatctct acagacggat 3301 cgaatcctat tggctgactc gcaaccggat taattttcgg aagcagtcta taaaccaacg 3361 acaagcattg cttggttcgc gcaagggtcg attagcaacg atcgatctct ctgaagcgag 3421 tgaccgggtt ccgctcggcc ttgctatcag gatgtttgat gcgagtcctg atcttaagga 3481 ttcaattcta gcatgtcgct cgaccagagc gcaacttccg gatggtcgtt ttattgaccc 3541 tctccttaag tttgcgtcaa tgggtagtgc tctatgcttt ccgattgagg caatgtattt 3601 ctacactgct tgtgtagttg ccatgttgga aagtacaggt ctctcctaca cccaacgaaa 3661 tatccgaaag gttactagga aggtgtacgt gtatggggac gatatagtgg tccccagcgc 3721 gaatgcggac gttgttctag agaccttacg caaatacaat tgtaaggtta acgtcaataa 3781 gactttctgc acaggaatgt tcagagagtc atgtggcgta gatgcgtacg ctggttacga 3841 ggttacgcct acgtatatca gacaaccgcg tccgaagaac aagcagcaac acaaggagat 3901 agtctcttgg tgtgcaaccg ccaacctctt ctacttgaag ggttattggc gcacatcaac 3961 tctcttgttt aaaatactcg agaagtacac agggcccttg ccctatgtgc gggaaacatc 4021 tccattgttg ggtcgttatt cctatcttgg ttacgagtct gttgggcggt ttgctgctcc 4081 atcacctttt gtccctttcg atagggacga ttgggagcgg aggagcgcca atagggacta 4141 ttcgaagatc ccgaatccaa ctaaaccgta ttatcagacc ccagaagtaa ggggctggaa 4201 accaagccca gtttatcgct ctgatgagct ggatggatgg gccgctctaa caaaatgtct 4261 ctcatcgaaa agagagatat ggcggtccga tacgaccgat ctggtaagac atttctctgc 4321 tcgcacctcc ttagaggaga ttgcggcctc tgatttgtcc catctggacc gatctgcact 4381 gcacggagca gtcacattga aactccgttg ggccctggca cactactagg aaggtgtacg 4441 tgtatgggga cgatatagtg gtccccagcg cgaatgcgga cgttgttcta gag //