LOCUS BK013973 3958 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.4_11 genomic sequence. ACCESSION BK013973 VERSION BK013973.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.4_11 ORGANISM ssRNA phage Gephyllon.4_11 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus edaphocola. REFERENCE 1 (bases 1 to 3958) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3958) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035051 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3958 /organism="ssRNA phage Gephyllon.4_11" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786169" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Gephyllon.4_11" gene 59..1315 /gene="Gephyllon.4_11_1" CDS 59..1315 /gene="Gephyllon.4_11_1" /codon_start=1 /transl_except=(pos:59..61,aa:Met) /product="maturation protein" /protein_id="DAD51991.1" /translation="MSEMKTRTKRRPKLQLGKAKVVRVDRNTDNGNVVTSVQLNNRID SSSGLQKTKSEGHPWNRKERPPGDLGGNFWTWRVSNLTKKGGYHSWRESFTGPAWIKT TIDYNLNCYAINPEAVTSPPDLSSNAIALGSKGTTAIARCSPTNSVADLSVFLGETMK DRLPSIPFLRSLEKRASLAFHAGDEFLNAVFGWAPLVADIKKSATAIQHAQKVIHQFE RDAGKQVRRRFTFDTEHSVESTLLGTGIEAWYGSTSSGPASTYMGQGPLFRTREITRS QWFSGAFTYHLPEGYLGLGDVVGKADKLFGLELTPSVLWELAPWSWAIDWVTNIGDGI SNLSNWSQFGQVLRYGYIMETTSVRDTYTLVTNGPGGQFVHEPVVIDTTVKQRQKANP FGFGVTWEGLNPLQLAIAGALGLTKG" gene 1385..1753 /gene="Gephyllon.4_11_2" CDS 1385..1753 /gene="Gephyllon.4_11_2" /codon_start=1 /product="coat protein" /protein_id="DAD51992.1" /translation="MALTDPQSVTINAVANSLPRTFVQGGKSQYMSGDGLITETFSTT PGNRGRKRHLMRIDHSKLTPNPFDTSNNIEVSMSCYVVVDVPPDGYTATEKKQVVDGF VAQLNASSGALITKVLGGES" gene 1805..1999 /gene="Gephyllon.4_11_3" CDS 1805..1999 /gene="Gephyllon.4_11_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51993.1" /translation="MAPKSRIPSTIGTHRDSIPKRRKEDHSYLQPRSRVVAIVLGLFV ILSDSGFFSAVADEVSNGCF" gene 2049..3920 /gene="Gephyllon.4_11_4" CDS 2049..3920 /gene="Gephyllon.4_11_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51994.1" /translation="MKSLMQLWTRLANELARQCCTCATRDIKYVSRRYEYEGESFLTI SLPSFGKDFERSLDQGYVAPTLFMGFPWQAGLPRLFGGFLGLVFDHHSGVLLDNPSVA AIRSIRQLTLMFGKILKPCSDARIKEAMGKYVECEQEVREYDALMTEAQSLDFHRVST LLFRDLFGLLDENVFDRTLLPKHGPGATADRISGNQKYQHRTWPARLEAYFPFGEYGV SSSALVDKVNPIVFLEPGQEFPARVIPVPKTLKTPRIIAAEPVAMQYAQQALADRLWS IVRRDDNLRWMVGHREQETNQLLARKGSRMGNLATLDLSEASDRVSNQHVRLMTTDFP LLQGAIDSCRSLTADVSGHGVIPLAKFASMGSALCFPIEAMVFLTMIFIGIEKELSTP LTPELISSFKGKVRVYGDDIIVPVEYVRTVISSLESFGIRVNRTKSFWTGKFRESCGK EYYDGNDVSIVRVRREFPTSRHDVSELVSLVSLRNQLYAAYYWDTVEWLDAQIVKLIK HFPVVGPNSPILGRISFTESVKGQRIHPELHYPLVRGYVVRARSPRDQLSDEYALTKC LLQLERRDRHDLSESEDLTFTPSGWQVGGKPTVDDEHLERYGRPQYVSIKLKWASPV" ORIGIN 1 cgcagtgcaa caattcacct attctcgaaa gagaataccg aatccaaagg agcagcccgt 61 gtccgagatg aaaacacgca cgaagcggcg tcccaagctt cagcttggga aggccaaagt 121 cgtgcgtgtc gatcggaata ctgataacgg aaatgttgta acttccgttc agttaaataa 181 ccgtatcgat tcatcctcgg gacttcaaaa aacgaagtcc gaaggccatc cctggaaccg 241 caaagagcgg cctccagggg atctgggtgg taacttttgg acctggcggg tcagtaatct 301 cactaagaag ggtggatacc attcttggag agaatcattt actggtcctg cctggatcaa 361 aacaacaatt gattataatc tcaattgtta tgctatcaac ccagaggcgg ttacgtcgcc 421 ccccgatttg agttccaatg caatcgcatt gggctctaag gggacgacgg ccattgcgcg 481 gtgtagtcct accaattcag tcgctgattt aagcgtcttt cttggtgaga ccatgaagga 541 tcgacttccg tcgattcctt tcctccgaag cctcgaaaag agagcgtcac tagcatttca 601 tgctggtgac gagtttctca atgcggtttt cggttgggca cccttggttg ctgatattaa 661 gaaatcagca accgctattc agcacgctca aaaggttatt caccaatttg agcgagatgc 721 tggaaagcag gtgcgacgcc gctttacgtt cgacacggaa cattccgtag aaagtacgtt 781 gctgggtact gggattgagg cctggtatgg ctccacttcc agtggccctg catcgactta 841 tatgggacaa ggtccacttt tccgaacgcg cgagattacc agaagtcaat ggttttcagg 901 tgcgttcaca tatcacttgc ccgagggtta ccttgggtta ggtgatgttg tgggcaaggc 961 cgataagtta ttcggtcttg agctaacccc ctctgtactt tgggagttag caccttggag 1021 ctgggccatc gactgggtaa ccaatatcgg ggatggaata tccaacctct ctaattggtc 1081 ccagtttggt caggttttgc ggtatgggta tatcatggaa acaacttccg tgagagatac 1141 ctatacactt gtaacgaacg ggccaggagg ccagttcgta catgagcctg tcgtgattga 1201 cactactgtc aagcagcgac agaaagcaaa cccctttggt tttggcgtga catgggaggg 1261 attgaaccct ctccagctcg ccatcgctgg cgccttggga ttaaccaagg gctaagccag 1321 tgcgtttgca ctgacgtaaa caccaacaat cgcgggattg aattcccgca aggagttgtg 1381 ccttatggct ctaaccgatc cacagtctgt caccattaat gcggttgcga actcgctgcc 1441 gaggactttc gtccaaggtg gcaagtcgca atacatgtcc ggtgacggac tcatcacaga 1501 gacgttttca acgacgccgg gaaaccgggg tcgtaagcgt cacttgatgc ggattgacca 1561 ctcgaagctc acgcctaatc cgttcgacac ttcgaataac atcgaagtgt cgatgtcgtg 1621 ttacgtcgtg gtggatgttc cacccgacgg gtacacggcg acggagaaga agcaggtcgt 1681 tgatgggttt gtagcccagc tcaacgcctc ttcgggtgct ctcatcacca aggttcttgg 1741 tggcgagagc tagggtctgc cctctaacat cagggattat attcctgaaa taggaggtac 1801 tcgtatggct ccaaagagtc gaattccttc gacgattgga acccatagag actcgattcc 1861 aaagcgtaga aaggaagatc attcctacct acagccaagg tctcgggtgg ttgcgatagt 1921 cttaggacta ttcgtcatcc tgtcagactc tgggttcttt agcgctgttg ctgacgaagt 1981 cagtaacggt tgcttttgag cgatggtcat taggctaagg aaagttaacc tctatttaag 2041 gaggggcttt gaaaagccta atgcaactct ggactcgttt agccaatgaa ttggctaggc 2101 aatgctgcac atgcgccact cgagacataa aatacgtctc gaggaggtac gaatacgaag 2161 gtgaatcgtt tctcacgatt tccctcccat cctttggaaa agacttcgag agaagtcttg 2221 accaagggta tgtggcccct accttgttca tgggtttccc atggcaggca ggtctccccc 2281 gtttgttcgg aggtttcctg gggcttgtat tcgaccacca cagtggtgtg cttctcgaca 2341 acccgtccgt tgctgcaatt cgatccattc gtcaactcac gttgatgttt ggaaagatcc 2401 ttaagccttg cagtgatgca aggatcaagg aagcaatggg caagtatgtc gagtgtgagc 2461 aggaagtacg ggagtatgac gccttgatga ccgaggcaca aagcctcgat tttcatcgag 2521 tgtctactct gctttttaga gatttgttcg gactcttaga cgaaaatgtc tttgatagaa 2581 cacttctccc aaagcacgga ccgggtgcaa ctgctgatcg tatttctgga aatcagaaat 2641 accagcatcg tacctggcct gcccgattgg aagcctactt tccatttgga gagtatggtg 2701 tatcctcatc ggctttagtc gataaggtaa atccaatcgt cttcctcgaa cccggtcagg 2761 aatttcccgc tagggtgatt cctgttccta aaacgctgaa gactccaagg ataatcgcag 2821 cagagccagt tgctatgcaa tatgcacagc aggctctggc ggatcgtctc tggtccatcg 2881 tcaggaggga tgacaacctc cgatggatgg tcggtcaccg agagcaagaa acaaaccaac 2941 ttcttgcccg gaaaggttcc cggatgggta accttgctac gctcgatttg agcgaagcgt 3001 ccgatcgtgt ctccaatcag catgtaaggc taatgactac cgattttccc ttattgcaag 3061 gggcgatcga ttcttgtcgt agcctgacgg ctgatgtatc tggtcatggg gttattcccc 3121 tggccaaatt cgcgtcgatg ggttcagccc tctgttttcc catagaagca atggtgtttt 3181 taaccatgat cttcataggg attgagaagg agctaagcac gccgcttacc ccggaactca 3241 tttcgagttt taagggtaag gtgcgagtct acggggacga tattatcgtt cctgtagaat 3301 atgtgcgtac cgtgatttcc tcactcgagt ctttcgggat tcgagtgaat cgaaccaagt 3361 ctttctggac tggtaagttc agagagtctt gtggtaagga atattacgac ggcaatgacg 3421 ttagtatagt cagagttcgt cgtgagttcc ctacatcacg gcatgacgta tcggagctag 3481 tctcgctcgt ttccctacgt aaccagctat atgctgctta ctattgggat acggtcgagt 3541 ggttggatgc ccagatcgtg aagttaataa aacacttccc ggttgtgggc cccaattctc 3601 cgattttagg aaggatttca ttcactgaat ccgtaaaggg tcagcgaatt catcctgagc 3661 ttcattaccc tcttgtcaga ggatatgtag ttcgcgcacg tagtccgcga gatcaactct 3721 cggatgagta cgccctaact aagtgcctcc tgcagctcga acggcgagat cgtcatgatc 3781 tttcggaatc cgaagatctg actttcacac catccggctg gcaggtcggc ggtaagccaa 3841 ctgtcgatga tgagcactta gaacgttatg gacgtcctca gtacgtcagc ataaaactga 3901 agtgggcttc tccagtctaa cagctggggg agtggggctt agtatgccct acagggag //