LOCUS BK013478 4353 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.4_17 genomic sequence, sequence. ACCESSION BK013478 VERSION BK013478.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.4_17 ORGANISM ssRNA phage Gephyllon.4_17 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Solspiviridae; Thiuhmevirus; Thiuhmevirus pedadaptatum. REFERENCE 1 (bases 1 to 4353) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4353) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034037.1 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4353 /organism="ssRNA phage Gephyllon.4_17" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786175" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Solspiviridae; Thiuhmevirus; Thiuhmevirus Gephyllon.4_17" gene 259..1542 /gene="Gephyllon.4_17_1" CDS 259..1542 /gene="Gephyllon.4_17_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50267.1" /translation="MTRVRQRNNTLPLSMTQRVRQYNNSGTLLTDDTTPYSAYNIGLM QYEGPFEMMTDEVTPSFKKRSARGEIIINPMSWNRTERLISGYGGELQTPKAAVPGQD AYALVDQAGTWVLPSLYGTHSTSRDIQSLRDIAITQAYGNVADPDAQSLVVLLESKKT MKFLQQSLGSMLGGIHALGTGKPRRAVEAIFRGRSNSNGQIESIPKQIVNAAAQKWME YRYAWGPMFFDIRDHVNAYGNIRAKRRVARGNASDQYEYTDTTAGFVLAGTGFTCTLH RTGTNSRKIRAAIIYEETNDIRQTLNKYGLLALPSVAWELTPFSWMADWFGNLSDCFK AMSPVVGVKILGCSKTEFTDEQITTWSDSLFHSDYKTTSFNAGLEVMRYKSKVRDQFT PYFRPRITVRLNWKRGLDVLALASQTFKSMKWVTG" gene 1720..2088 /gene="Gephyllon.4_17_2" CDS 1720..2088 /gene="Gephyllon.4_17_2" /codon_start=1 /product="coat protein" /protein_id="DAD50268.1" /translation="MSITLATPTPDDVFVLSKIGELSVELIDNTDITKPAVLSFKRTE PKPTATFAGVNRHEIKVSQRVALADSSVVTAIATISSSFPVGMTDAQMQLFLDRIKDL STSTAADNLLTKNLLPLAGS" gene 2257..4308 /gene="Gephyllon.4_17_3" CDS 2257..4308 /gene="Gephyllon.4_17_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50269.1" /translation="MTTRQSRRQEQRPKGKAAAERLLKSSLLAALEKKFSSSVTEQLP WDLLGCLAQNLDIRSPIKTSLQEVVKKRDVLSYLSLPSRPKQLYGSAEEYFQEAIVLN LLKKYPFGTLEGVDPEASAMKTFYAAELQCRRTNRRLRYYRERYFRLAKNRIGVDTIL HSARQLIAQLIGHSPKSNLEEIRSSMSHGPGGVLDTEDSTRTTFYYKVNADRYSVTPG CYPYAIAAILSDQRWRQMVWADHYNCSALSVPPVADSREAVIKRLDVFTYNKVVFVPK TAKTHRVIAAEPMMNMFCQKGVGRFFRTRLKRVGINLDSQVRNQHLAYLGSRQDIHRP SSRPCTLDLASASDTLAIELVRELLPPDWFDMLNDLRCPQGRLKGRLIFYEKFASMGN GFTFELETLIFWSLCVATAAYYQEDASKVSVYGDDIIVPANIALACIEVLDFCGFKTN KEKSFVFGPFRESCGKDYFEGFPVRPFYLKEAVQDARSAIYVANSIACLRNQDGNSFD DTRDLSAYKTVIRHIPKIIREHLLGPRVEALDSHIFCSFDTASRSRLVKWNRDYHCYE FPAYAFVAEDFRGRLAPRYLQFIHASAGFSNFEIFHPKLLKAGVAYNLDFKVDERLTA SKYLLSGWSFVHRSIQKVSNGTSASTVTRRGRVRPTLNVLLTERWDPTVTAFDVAVMS G" ORIGIN 1 ttatccctgg ttttgagttc agaagggtta ttcaatcatc atatccgtct accctgaaag 61 aggggtagca gagggaccca gtagtgatac tcggttcctt tgagactgat tgaaagaatt 121 tcccttctga ctttttgccg gagataagtg catgaaagct atctgctaag atagcctaac 181 acgcgctaac tcgcgtgggg cgcaacgctc cactctccga agttggctta atcaaccaac 241 ctttagagga gttaggtgat gacaagggta agacaacgga ataataccct tcctttgagc 301 atgactcaac gtgttcgaca gtataacaac tcaggcactc ttttgacgga tgacaccaca 361 ccgtattcag cctataatat tgggctgatg cagtatgagg gtcccttcga aatgatgact 421 gacgaggtta caccgtcgtt caagaagcga agtgctcgtg gggagattat tatcaacccg 481 atgtcctgga ataggaccga acgtctcatc agcggctatg ggggtgaact tcagactcct 541 aaagcagctg tgcctggtca agatgcgtat gctcttgttg atcaggctgg tacgtgggtt 601 ctaccctcct tgtatggaac gcattctaca tctcgtgaca tccaatcgct tcgtgatatt 661 gctatcactc aggcgtatgg caatgttgca gacccggatg cgcagtcttt ggtagtcctt 721 cttgaatcta agaagactat gaagtttctt cagcaatctt tgggatccat gcttgggggc 781 attcatgcct tgggcactgg taaacctagg agagctgtcg aagctatctt ccgaggacgt 841 tccaactcga atggtcaaat agaatcgatt ccaaagcaaa tagtgaatgc tgccgcccag 901 aaatggatgg agtatcgcta cgcttgggga ccgatgttct tcgatattcg agatcacgtg 961 aatgcctatg gcaacatccg cgctaagcgg agagttgctc gcggtaatgc gtcggatcag 1021 tatgaatata ctgatacgac cgctggcttt gtgctagcgg gtacgggttt tacctgtaca 1081 ttacatcgta cggggaccaa tagtcgcaaa atacgcgcgg caatcatcta cgaggaaacc 1141 aacgatattc ggcaaacgct gaataagtat ggcttattgg ctttaccttc agtagcctgg 1201 gaactcacac ctttcagctg gatggctgat tggtttggga acttgagcga ctgttttaaa 1261 gccatgtccc ccgtagtggg cgtgaaaata cttggctgtt caaaaacgga gtttactgat 1321 gagcagatca cgacttggtc ggattccctc tttcacagcg attataagac tacgtctttt 1381 aacgctgggt tagaggtcat gcgatacaag tcaaaggtcc gtgatcagtt taccccgtat 1441 tttcggccaa ggatcacagt tcgtttgaac tggaaacgtg gactcgacgt gttggcttta 1501 gctagtcaaa ctttcaagtc gatgaagtgg gttaccggat gaggtttaat ttcattcggc 1561 cacccaaacc ctcgacgaag attgtttggc taatgcctcc gcgctgggtc ttcttttact 1621 tcgtagtgtt caccatagtg ttggttcttg ttccgtagga atacggtcaa ccctgcacta 1681 gaagtgaatt ttctccctta agtgggaaaa gagagtgaaa tgagcattac gctcgcaaca 1741 ccaacgcccg atgatgtctt tgtactgtcc aaaattggtg aactgtctgt cgagttaatc 1801 gacaatacag acatcaccaa gccggctgta ctcagtttca aacggacgga gcccaagccc 1861 accgcaactt tcgctggcgt taatcgccac gaaatcaagg tgtcgcaaag ggttgctttg 1921 gcagattcct cagtggttac tgccattgcc acaatcagct cgtccttccc agttgggatg 1981 acagacgccc agatgcagtt gtttctcgac cgcatcaagg atctgtctac ctcaaccgcg 2041 gcagacaacc tgctgacgaa aaacctgctc ccgctcgctg gttcttgatg gttacggctt 2101 cggcaatatc actggttttg ttgtattact tccagtggtt gctgctgcca gtgactatca 2161 ttttcctgct tgctggagta ggctttctgt tcctcgcctc taagattttc agggtcggga 2221 gaacgtttaa cccgttcaaa agaaagggtg tggcatatga ctacgaggca atctcggcgt 2281 caagagcaac ggcccaaagg aaaggccgcg gcagaaaggc tgcttaaaag cagtcttctt 2341 gctgcactag agaagaaatt ctctagctcc gtcaccgagc agctcccatg ggatctgctt 2401 ggttgtttag cacagaacct tgatattagg agtcccataa aaacttcttt acaagaagtg 2461 gtaaagaagc gggacgttct gtcctatttg tctcttcctt cacgtcccaa acagttgtat 2521 gggtcggcgg aggagtactt ccaagaggca atcgtgctta accttctcaa aaagtatcct 2581 ttcggtactt tggaaggggt tgatcccgaa gcatctgcga tgaagacgtt ttacgccgct 2641 gaacttcagt gtcgtagaac taatcgacgt ctcaggtact accgggagcg atatttccga 2701 cttgcgaaaa atcggattgg cgttgacact atattacata gtgcccgtca acttatcgct 2761 caactgattg gacattctcc taaaagcaat ttagaggaga tccggtcaag catgagtcat 2821 ggtcccggcg gtgttttgga tacagaggat tctacccgca caacctttta ttataaggtg 2881 aatgcagata gatactccgt gactcccggg tgctatcctt acgctatagc ggcgatcctt 2941 tcggatcaac gctggcgcca gatggtatgg gctgatcact acaattgtag tgctctgtct 3001 gtcccaccag tcgctgacag ccgtgaggct gtgataaagc gtttggatgt atttacatac 3061 aacaaggtcg tttttgtccc aaagactgct aagactcatc gagtcatagc agctgaacct 3121 atgatgaaca tgttttgcca aaagggagtc ggcagatttt ttcgaacccg tttaaagcgg 3181 gtcggaatta atctagactc tcaggtacgc aatcaacatc ttgcgtacct tggcagccgt 3241 caggatattc accgtccgtc gtctcgtcct tgtactttgg acttggcttc ggctagtgat 3301 acactggcga tcgaactagt tcgggagtta ttaccccctg actggtttga tatgctcaac 3361 gatcttcgct gcccgcaagg gaggctaaaa ggtcggctca tattctacga gaaattcgcg 3421 agtatgggca atgggttcac cttcgagcta gagaccctta ttttttggtc tctatgtgtg 3481 gctacggcag cctattacca agaagatgca tctaaagtgt ctgtttacgg ggatgacata 3541 attgtccctg caaacatagc tttagcctgc atcgaggttt tagacttctg cggctttaag 3601 acaaataaag agaagtcatt tgtctttggt cctttccgtg aatcttgcgg gaaggattac 3661 ttcgagggtt ttccagttag gcctttttat ttaaaagagg ccgtacagga cgcacgtagc 3721 gcaatctatg tagctaactc tattgcctgc ctaagaaatc aggacggtaa tagtttcgat 3781 gacactcgtg atctgtcggc gtataagacg gttatccgtc atattcctaa gatcattcgt 3841 gagcatttac taggtcctcg agttgaggcc ctagatagcc acatattctg ttcatttgac 3901 accgcctcta gatcgaggtt agttaaatgg aacagagact accattgcta cgagtttcct 3961 gcctatgcct tcgtcgcgga ggattttcgc ggtcgattgg cacccaggta cttgcaattc 4021 attcacgcaa gcgctgggtt tagtaacttt gagatctttc atcccaagtt actaaaggct 4081 ggagttgctt acaatttgga ttttaaggtg gatgaaagat tgaccgcttc gaagtatctt 4141 ctcagcggtt ggtccttcgt tcaccgatcg atccaaaaag taagtaatgg gacctctgct 4201 tcgacagtaa ctcgaagagg cagagttaga ccaactctta acgttctact cactgaacgt 4261 tgggacccaa ccgtcacggc ttttgatgtt gctgtgatgt cgggctagag ttatccgggg 4321 aaaggttaaa cccaagtacc ctggacgagg aga //