LOCUS BK013948 4170 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.4_3 genomic sequence, sequence. ACCESSION BK013948 VERSION BK013948.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.4_3 ORGANISM ssRNA phage Gephyllon.4_3 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Pihngevirus; Pihngevirus chorocola. REFERENCE 1 (bases 1 to 4170) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4170) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN033940 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4170 /organism="ssRNA phage Gephyllon.4_3" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786183" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Pihngevirus; Pihngevirus Gephyllon.4_3" gene 142..420 /gene="Gephyllon.4_3_1" CDS 142..420 /gene="Gephyllon.4_3_1" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51894.1" /translation="MTMFDSKYKLTNSELELVNECLDVFEASGLTGLLNHMHWTDHGK WVFPRDEVLHAIAQSTLYDVYDETGVKFLPQETLVNLFRVCLGIVVDQ" gene 480..1769 /gene="Gephyllon.4_3_2" CDS 480..1769 /gene="Gephyllon.4_3_2" /codon_start=1 /product="maturation protein" /protein_id="DAD51895.1" /translation="MFGWCFNLLVGVVPLGDTMPTKSGTRKVDLRFAEISTSSLLGPR NENYGSPLGGFGNAAFTRTDDGPVKGYLRRIARGDNATSELTAQQTNFDIKRGRYLAH YYNKADKRFYMYARSGLMADAGLPASPSSTDVSLTDDQAKVGFAKRAREAQNSFQGGT FLGELREALHMIKHPAQAFRKGFSDYFRTLKKRRRGSPSHRSKVLSDTWLEYVFGWKP LLSDIDSAAKALGNLAFREPFKMVSFYAKNQVPTQNKARFSGNVGPLVWHEWRQEYRE TVVVYRGVVDCKIDGGAGDIRRDFGLTLEDFVPTLWELIPYSFVADYFTNIGDIISAF SYGGMNLRWTSRTQVIKAIADNITADAKLNSTDPINIIEFGNDPGRSVITRRIVERKN YTAGFVPSLRFEIPGANSTKWVNLLALKNGQRRLTPF" gene 1786..2253 /gene="Gephyllon.4_3_3" CDS 1786..2253 /gene="Gephyllon.4_3_3" /codon_start=1 /product="coat protein" /protein_id="DAD51896.1" /translation="MTWSPSSPVTGGAQTGFTAPTYTLTADVAPDVNGKQHAVTTLGG TQATVRTHSVSDPFTVTFIRPKNPRALPNPNSVTGKYATVPKNTYGIIVRKGVNYAVN NAPDICVARLYVDVPAGADAYDPAQLRALMSLLAGILSQQASGVGDTLTTGIM" gene 2430..4145 /gene="Gephyllon.4_3_4" CDS 2430..4145 /gene="Gephyllon.4_3_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51897.1" /translation="MGICPVALYKNLCLDLTDQVGGDLISLFEKLDSPPPDLSTREMA AYQIQKSLLKKLQKTNSTESDRRALAKFLAINIKCEKWSLVLKDSWDEVLWGELRRSL HDFFHPNGVPIFDSITDFFHHGRVGPGSSIGALGGDFYTKMFSSPLTTTRSSLYLAYK NYIRNFPEWSNAEFIRQQTYGEAHVVEGNRLRFVPKDDKISRTICVEPSLNMFVQLGA GHIIERRLLSAYGINLADQPFKNRELARQGSLGHGLITCDLSSASDSLSLSMLRACLP KHVMGSLEWLRSPVSETTEGQVKLNMVSTMGNGYTFPLQTALFASIVVAAFRARGLKP RYPRGGDFGNFGVFGDDIICPDQIWPDVRRLLDLCGFDINYNKTFVEGPFRESCGNDF YRGHNLRGVYVKRLTTQQDRVSVINQLNLFSTRTGIRLPKAVQYLLRSVEWLPVPRGE NDVSGIKVPYSLIRKDAMLDPNGSALYRHYEPVGLRIRILESALIYPRTSKRGIYNPS GLFVSFLQRSINSCTIGVRHDLCRYKKKRRVTPFWDANPSVHPLQGWFPWQRWDTAVY FNLFG" ORIGIN 1 tattgtaact gctattgctg ccgttggagc acaagtttgc tccccatttt tgacttgtca 61 aacctgtacc tccacagccg ctttcggggc tcactctgga gatcagcaat cacgctgtct 121 tcttaatcac ggagattttc catgactatg tttgacagca agtacaagtt gaccaattct 181 gagctagaat tagttaacga gtgtctagat gttttcgaag catccggact aactggtctc 241 ttaaaccata tgcactggac cgatcacggt aaatgggtat tcccgagaga cgaggttctt 301 catgctatag cacaatctac actctatgac gtctatgacg aaacaggagt gaagtttttg 361 ccgcaggaga ctctcgttaa tctctttagg gtttgcctag gtatcgtggt tgatcagtag 421 cacttaggtt cgagtagctc ttctctcacc cgctgacctt gaggggccat aaatccttct 481 tgttcggctg gtgttttaat cttctagtcg gggttgtacc ccttggtgat accatgccta 541 caaaatctgg cacgcgtaag gtcgatctac gttttgctga aatctcaact tcttcactct 601 tgggtccccg taacgaaaat tacggttccc cacttggtgg attcggtaac gcagcgttca 661 cccgtactga tgatggccct gtgaagggct atctccgacg gattgcacgc ggcgataacg 721 ccacgagtga gttgactgct cagcagacta atttcgacat caagcgaggc cgatatctgg 781 ctcattatta caataaggca gataagcgat tttatatgta tgctagaagt ggtttgatgg 841 cggatgctgg ccttccagcg agtccatctt caaccgatgt atcacttact gatgatcagg 901 ctaaagtggg ctttgctaaa cgggctcgtg aggcgcagaa ctcctttcaa ggaggtacgt 961 ttctcggcga gcttcgtgaa gcattgcaca tgattaaaca tcctgctcag gcttttagaa 1021 agggctttag tgactacttt cgcaccttga agaaaaggcg ccgtggatca ccatcgcatc 1081 gatctaaagt tctgagtgac acctggctcg agtacgtgtt tggctggaag cccttgttat 1141 ccgatattga ctctgctgcg aaggcacttg gtaatttagc gttcagggaa cctttcaaaa 1201 tggtttcctt ttacgctaaa aatcaagtac cgactcagaa taaggctcga ttttcgggta 1261 acgttggccc tctagtctgg cacgaatgga gacaggaata ccgagaaacc gtggttgtct 1321 accgtggcgt cgttgattgt aaaatcgacg gcggtgcggg tgatattcga cgggatttcg 1381 gtctgacgct tgaggatttt gttcctactc tgtgggaact tatcccctac tcgtttgtcg 1441 cggattattt caccaatatt ggtgatatca tttctgcgtt ctcttatggt ggtatgaatc 1501 tgcgttggac ctctcgcact caggttataa aggctattgc cgataatata accgctgatg 1561 cgaagttgaa ctcaacagat cctatcaaca tcattgaatt tggaaatgat cctggtcgtt 1621 cagttatcac tcggcgtatc gtagaacgca agaactacac cgcgggtttc gtaccgtctc 1681 tacggttcga gatccccggg gctaattcta caaagtgggt taacttactt gctttgaaga 1741 acggtcaacg tcgtcttact cctttttaat ttggagctta tgctcatgac ttggtctcct 1801 tcctcgcctg taactggggg cgcacaaacc ggttttactg ctccgacgta tactttaacg 1861 gcggacgtag ctccggatgt gaacggaaaa cagcatgcgg ttaccacact tggtggtacg 1921 caggctactg tccgaaccca ttcagtctcg gaccccttta ccgtcacgtt tattaggccg 1981 aagaaccctc gggctcttcc taaccctaat tccgtgacgg ggaagtacgc gactgttcca 2041 aaaaatacgt atggtattat tgttcgtaag ggcgttaact atgcagttaa taatgctccc 2101 gacatctgcg tggctcgact ttatgtcgat gtccccgcag gtgccgatgc ttatgatcct 2161 gcgcagcttc gtgctcttat gtcactccta gccggtatcc tgtctcaaca ggcctctggt 2221 gtcggagaca ctctgacgac gggtatcatg taatgacgcc tttcgtcgcg cgattagcaa 2281 ccgcggtagt tggcctgctt gcagacctgc tactgagtgt tatcgcaaaa agcgcaaaaa 2341 cagtgcgtct tcttcctttc attaggaaga ggtaatgtac tgtatagcgc ttcagcgact 2401 ttctacctac ttatttactt ggaggttata tgggtatttg ccctgttgct ctttacaaga 2461 acctttgctt agatcttacg gatcaagtgg gtggtgacct aatttctctc tttgagaagc 2521 tagactctcc tccacctgat ctttcgaccc gtgagatggc tgcgtatcag atacagaagt 2581 ctcttctgaa gaaacttcag aagacgaatt cgactgagtc tgatcgtcgc gctctcgcta 2641 aatttcttgc tattaacatt aaatgcgaga aatggtcgct agtcttaaag gatagttggg 2701 atgaggtcct ctggggtgag cttcgtcgct cacttcatga cttcttccat cctaatggtg 2761 ttccgatctt cgattcgata accgatttct tccatcatgg gagagtcggc ccgggttcgt 2821 cgatcggagc cctaggtggg gacttctata ccaagatgtt ctcatctcct ctaacgacta 2881 ctagatcttc cttgtacctt gcgtataaga actacattag aaactttcca gaatggtcta 2941 atgctgagtt tatcagacag caaacctatg gtgaagctca tgtagttgaa ggtaaccgtt 3001 tacgcttcgt tccgaaggac gataaaatat cccgtacgat atgtgttgaa ccgtctttga 3061 acatgtttgt tcaactcggc gctggccata tcatcgaaag acgcctgtta tctgcctatg 3121 gtataaacct agcagaccag ccgtttaaga acagggagct tgctcgccag gggtcgttag 3181 gtcacgggct aataacctgt gacctttcgt cggcatcgga ttctctctca ctctcgatgc 3241 tccgcgcgtg cttaccaaag cacgttatgg ggtctcttga gtggttgagg tcgccggtgt 3301 cggagactac tgaggggcaa gtgaagctta atatggtcag tacgatgggg aatggttata 3361 cctttcctct tcagacagcc ttatttgctt caattgtagt agccgctttt cgagcgaggg 3421 gccttaagcc ccgatacccg agaggcggtg atttcggtaa cttcggggtc tttggggacg 3481 acatcatttg tccagatcaa atctggccgg atgtccgtcg tctccttgac ctctgcggtt 3541 tcgatatcaa ctacaataag acctttgttg aaggtccgtt ccgcgaatcc tgtggtaatg 3601 acttctatcg aggtcataac cttaggggtg tctacgttaa acgtttgact acccaacagg 3661 accgcgtctc tgtaattaac cagcttaacc tgttctcaac aagaacaggc attcgcctcc 3721 cgaaagccgt gcagtatctt ctacgttctg tagagtggct gcccgtccct aggggggaga 3781 acgatgtttc tgggataaag gttccgtact ctcttatccg taaggatgcg atgcttgacc 3841 ctaatgggtc ggcgctctac aggcattatg aacctgtagg acttcgtatc aggattctag 3901 agagcgcgtt aatctacccc aggacgtcta agcgagggat ctataaccct tcggggttat 3961 ttgtctcttt tttgcagaga tcgattaatt cttgcactat aggggtcagg catgacctct 4021 gtagatacaa gaagaagcgg cgggttactc ccttctggga tgctaaccct tcggtccacc 4081 ctcttcaggg gtggtttccg tggcagcggt gggataccgc tgtctacttt aacctttttg 4141 gttaagtaga tccccggggt gagatgcccc //