LOCUS BK013866 4417 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.4_6 genomic sequence. ACCESSION BK013866 VERSION BK013866.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.4_6 ORGANISM ssRNA phage Gephyllon.4_6 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus edaphovicinum. REFERENCE 1 (bases 1 to 4417) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4417) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035619 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4417 /organism="ssRNA phage Gephyllon.4_6" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786186" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Gephyllon.4_6" gene 24..1430 /gene="Gephyllon.4_6_1" CDS 24..1430 /gene="Gephyllon.4_6_1" /codon_start=1 /transl_except=(pos:24..26,aa:Met) /product="maturation protein" /protein_id="DAD51600.1" /translation="MQYILDLWCYALLVQIEALSFTSVPLPADRRFEELLTSIKKRAI PYKFSTRGQLRHQRRYTDTGEVYSNNLYLGDSTEAFKHLIGIQVTESETHPAWKHPHP WGVFRGDLGGPFTMRKRYAESLSGSAGLGSPWVYDGYNQQASTTYSGPFLPIAPNFMA YPPYADSPDSELYKFGTEAISKVSPSNPVADLSVLLGETVREGLPALLGATLRKWRGM SGQELRNSIGHEYLNVEFGWKPLVNDLRKVSKAIRDRDALWAQYERDAGKLVRRRFEF PEIVTEKIQLVQQDTDPWYLPSGGVLSDPSRNNRGKVYRTDKVTIRRWFSGAFVYYLP VTVHGRGQVASNVLQAKKLLGLTLTPDTVWNLMPWSWALDWFSNTGDIINNWSNWAFD GQVLKYGYIMEHTVSERTYTYTGPTGLRSSVLPYDVVLVSETKLRRQATPYGFGLDVG KLSLRQQAIIAALGLAKS" gene 1500..1865 /gene="Gephyllon.4_6_2" CDS 1500..1865 /gene="Gephyllon.4_6_2" /codon_start=1 /product="coat protein" /protein_id="DAD51601.1" /translation="MSFTDPQTVTIAAVTTPLPRVSLGENKSEYLSADGLLRMTASHD YGKRTRRMLRIDTSKLAPDVFRPAENVDVSMAVYIVFDVPRRGGYTAAEQLGVYTGFK NQFSATSDALITKLLAGES" gene 2095..2340 /gene="Gephyllon.4_6_3" CDS 2095..2340 /gene="Gephyllon.4_6_3" /codon_start=1 /product="hypothetical protein" /protein_id="DAD51602.1" /translation="MSVDNRVNVRSEFVSYQRFGFTHIAVSVHFPSASQLRDDEWEAV DEFARACRKLDRVCLRFTADGDGSVSQTIAGSDGIDA" gene 2377..4296 /gene="Gephyllon.4_6_4" CDS 2377..4296 /gene="Gephyllon.4_6_4" /codon_start=1 /transl_except=(pos:2377..2379,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD51603.1" /translation="MKSLTSLWSCVAIDFATRCCTSATHDITTVVSRTEHEGLSFLAI TLADFGKAIQKWLDQGFVVPSDAPSFKRAPRSGLPAFMQGFLGRVFNPGSGVLLDEPC IEAIIAVRQLSLMFSKIALPKASITGSFIDGGNFRVVSEDRERLAMREFVKCEQDVKA SDNRLDPLYLEDFKRMSEMLFGDLFAKVDRDIHWGRLIPKHGPGSVADKLSSNAKWTQ QTWPARLQRCFPSEDYLIPNHSFRDDLDSELDVLEPGSERPVRVVTVPKTLKAPRVIA IEPAAMQYAQQAILGGLLDALKEDDFLSRIIGIDDQDPNRELARLGSLTGDLATLDLS EASDRVSNQHVLAMLEGYPQLLEAVQSCRSRKADVPGHGVIRLAKFASMGSALCFPFE AMVFATVIFLGIERELGTPLCREDLHKFSRRVRVFGDDLIVPRDYVLAVVDELSVFGH KVNVNKSYWTGRFRESCGKEYYDGHDVSIVKVRQCIPSRRSDASGVIATSELRNLFYL AGIWSAAQWLDAHLSKVLRYYPTVAPTSPLLGRVSFLGWEFKKLDPNTHGPLIKGYKV RSKPPLDHLEGAGALLKCLLSMSNRRVTPPLGLDVIVESDPLGHLVPNVDTEHLERSG RPKRVDIKLGWGSPV" ORIGIN 1 gccgtgaggg cccctagggc gcagtgcagt acatcctgga cctatggtgc tacgcattgt 61 tggttcagat tgaagctttg agcttcacat ccgtaccact cccggccgat cggaggttcg 121 aagagttgct cacttctatc aagaagagag ccattcccta caagttttca actcgtgggc 181 agcttcgtca tcagcgtcga tatactgaca ctggtgaggt ctactccaat aatttgtatc 241 ttggagatag taccgaagcg ttcaaacatc tgatcgggat tcaggttact gaatcagaaa 301 ctcatcccgc ctggaaacac ccacatccgt ggggcgtttt caggggtgat ctgggtggcc 361 catttacgat gcgcaagcgt tatgctgaat cacttagtgg ttcagctggc ttgggctcgc 421 catgggtcta cgacggctac aatcagcaag cttcgaccac atatagtgga ccgttcttgc 481 cgattgcacc caactttatg gcttatccgc cttatgcgga ttctcctgat tctgaactgt 541 ataagttcgg aacggaggcc atatcgaagg ttagtccgtc caatccagtc gcggatcttt 601 cagttcttct cggcgaaacc gtacgggagg gccttccggc tctcctgggt gccaccctta 661 gaaagtggcg aggtatgagt ggccaggaat tgcgaaattc cattggtcac gaatacctca 721 acgtcgagtt tggctggaag cctcttgtca atgaccttag aaaagtttct aaggctattc 781 gtgatcgtga cgccctctgg gcgcaatacg aacgcgatgc tggcaagttg gtacgccgca 841 ggtttgagtt cccggagatt gtgactgaga aaattcaact cgtccaacag gacaccgatc 901 cgtggtatct accatcgggc ggagtgttga gtgatcccag tcgcaataat cggggcaagg 961 tgtatcgtac cgataaggta acgatacgtc ggtggttttc aggtgcattt gtgtactacc 1021 ttcccgtgac cgttcacggt cgcggtcagg tagcttcaaa tgtccttcag gccaagaaac 1081 ttcttggtct gacactgacg ccagacaccg tctggaacct tatgccctgg agttgggctc 1141 tcgactggtt ctccaatact ggtgatatca tcaataattg gagtaactgg gcattcgatg 1201 gccaggtgtt gaagtacggg tacataatgg aacatactgt ttcagaacgt acctatactt 1261 atacagggcc gaccggatta cggtcgtccg tgcttcctta cgatgtcgtc ttagtttcag 1321 aaactaagct tcgtcgtcag gcaacaccat acgggttcgg cctggacgta gggaaacttt 1381 ctctacgcca acaggcgatt atcgccgcac ttggccttgc caagtcgtga tcgatagatg 1441 tactatctac gtcacaacgc caatcgggag ctttacgtag ctcctaggag tgattgccta 1501 tgtcgttcac cgatccgcaa accgtcacaa tcgctgcggt tacgacccct ctccctcgcg 1561 ttagcttggg tgagaataag tcggaatacc tcagcgctga cgggcttctg cgcatgaccg 1621 cctcccatga ctatgggaag cggaccaggc gtatgttgcg aatcgacact tcgaagctgg 1681 caccggacgt tttccgtccg gctgagaatg tggatgtgtc gatggcggtt tacatcgtct 1741 tcgacgtccc acggcgcggc ggctatacgg ctgccgagca actcggagtt tacactggct 1801 tcaaaaacca gttctccgcc acctccgacg cgctcattac gaagcttctc gccggcgaat 1861 cgtaaagatt cggcgctgat tagctttgag cgtgcctcca agttctcgcg gggatcctga 1921 accgcgacgg ttcagatatt ctcgcgaatc gcctaggaga gattcctctc ttgggcgtag 1981 gaagaccgat caacaggcac gtactaccat taccaagaag gttctggtag ttgtaaacgt 2041 ggctgtcggt ctcctgtacc tggtgggtga agcgattatt tacggacaag atttttgtcg 2101 gtagataatc gagtgaacgt tagatcagaa tttgtatcct atcagcgttt tgggtttacc 2161 catatcgctg tgtcggtaca ttttccctcg gcttcacagc tgagagacga tgaatgggaa 2221 gctgtcgatg aattcgctcg agcttgtcgt aagcttgatc gagtttgcct ccgctttaca 2281 gcggatggcg acggcagcgt ttcccagacc atcgccggat ctgacggcat tgacgcatag 2341 gctagggatc tgtacacccc ctatatagga gggacagtga aaagcctgac gtcactctgg 2401 tcctgcgtcg cgattgattt cgcgacgcga tgttgcacta gcgccactca cgacataaca 2461 actgtcgtga gtcggactga acacgagggg ttatcctttc ttgcgataac cctggcggac 2521 tttggtaagg ccatccaaaa atggctggac caaggtttcg tcgtcccttc ggacgcgcct 2581 tctttcaaga gggcgcctcg tagtggtctc cctgcattca tgcaaggttt ccttggacgt 2641 gtgttcaatc ctggtagtgg cgtgcttctt gacgagccat gcatcgaagc aatcattgct 2701 gtacgtcaac tttcattgat gttcagcaag atagccctcc cgaaagcttc cattactggg 2761 agctttatcg acggaggcaa ctttcgagtt gtttccgaag atcgcgagag gctagcgatg 2821 cgtgaattcg tcaagtgtga gcaggatgtc aaggcctcag acaatcggct ggatcctcta 2881 taccttgagg attttaagcg catgtctgag atgctttttg gcgatttgtt cgccaaagtg 2941 gatagggata tccactgggg tcggctgatc ccaaagcatg gtccaggcag tgttgctgat 3001 aaactaagca gtaatgcgaa gtggactcag cagacctggc ccgctaggct tcagcggtgt 3061 tttccgtctg aagactacct gattcccaat cattcttttc gggatgattt ggattcagag 3121 cttgacgttc tcgaacccgg ttcggaacgc cccgtaaggg tcgttactgt tcctaagacg 3181 ctgaaggctc caagggttat cgccattgag cctgctgcga tgcaatatgc gcagcaagct 3241 attcttggcg gtctccttga tgcgttaaaa gaggatgatt tcctctctcg catcatcgga 3301 atagatgatc aagatcccaa cagggaactt gctcgtctcg gatcactcac tggtgatctc 3361 gctacgctcg atctgagcga agcttccgat agagtctcca atcagcatgt acttgccatg 3421 ctcgaaggat atcctcaatt gcttgaggcc gtccaatcgt gcaggtcaag gaaggctgat 3481 gtgcctggcc acggagttat ccgtttggcc aagttcgcct ctatgggttc agctctgtgc 3541 tttcccttcg aagccatggt cttcgcgacc gtgatcttcc tcgggattga acgagagcta 3601 ggcaccccgc tttgtcgtga ggaccttcac aagttctcac ggcgggtgcg tgtctttggg 3661 gatgatttga tcgtccccag agattatgtg cttgccgtcg tagatgaact gagtgtcttc 3721 ggacacaaag tcaatgtcaa caagtcttac tggaccggaa ggttcaggga gtcttgtggg 3781 aaggagtatt atgatggcca tgacgttagt atcgtcaagg ttcgtcagtg tattccttca 3841 cgacggtctg acgcgagtgg agtcattgca acctccgaac tcagaaacct gttttatcta 3901 gcaggaatct ggtcggctgc gcaatggctg gatgcgcatc tgtcgaaagt acttcggtat 3961 tatccgacag ttgctccaac atcaccactg ctaggcaggg tctcgttcct tggatgggaa 4021 ttcaagaaac ttgacccgaa tacgcacggc cctctaatca agggctacaa agtgcgttcc 4081 aagccccctc ttgatcatct tgagggagca ggtgccttgc tgaagtgtct cctgtctatg 4141 tccaaccgga gagtaacgcc tccgttagga ctagacgtca tcgtcgagag tgaccctctg 4201 ggtcatctcg tgccaaacgt tgataccgag cacctcgagc gttcaggacg ccccaagcgc 4261 gtcgacatca agcttggatg ggggtcacca gtttagacaa ctggtgaccg ggggcttcaa 4321 tgcccctgtg ggagatacca atgtatcccc tcccggcaac ggaccagaca tcagtctgtc 4381 tatcaccggg cggtaaggag atgcacttgg cagtgca //