LOCUS BK013557 4092 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gephyllon.4_7 genomic sequence. ACCESSION BK013557 VERSION BK013557.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gephyllon.4_7 ORGANISM ssRNA phage Gephyllon.4_7 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Huhbevirus; Huhbevirus chthonocola. REFERENCE 1 (bases 1 to 4092) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4092) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-4092 MN033123.1 1-4092 FEATURES Location/Qualifiers source 1..4092 /organism="ssRNA phage Gephyllon.4_7" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786187" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Huhbevirus; Huhbevirus Gephyllon.4_7" gene 102..1331 /gene="Gephyllon.4_7_1" CDS 102..1331 /gene="Gephyllon.4_7_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50552.1" /translation="MVKGRNFVSPSYLGTEYYGSSPIGVKTYTTNIDISTMWVGDRGH YGYPHYPADKDVGGAFYLEGVRTKRNVLPLGDIQRGNPNPLDQHYTGGLAVDIPHTGA WSSQAFPADPYGATAYNRMKPTKASFGTYNSLFETKDLPGMIADIPFRFWNTAVQNLQ RAVRSFRDGGAGHFVGYEFGWKQLVQDVQNMCSLQQRGQKRLAWLLHNNNKPVHTAVT LVDTFDIVEDLAISGYGYLQPVLVTQYYAVEPHGRRLSTNREKVWAEGTYLYWLPDGP RDINWTNAMLASIYGQNVTAANLYKAVPWSWLLDWFTNVGTVLQNMDAGVAARLWSPR NYVMRKKEWTIQNTITGQFLDRASKSLFTATGSSSSTAFVKCRARGDPFGFATNQNTL SGMQQAIMGALGLSRLR" gene 1373..1723 /gene="Gephyllon.4_7_2" CDS 1373..1723 /gene="Gephyllon.4_7_2" /codon_start=1 /transl_except=(pos:1373..1375,aa:Met) /product="coat protein" /protein_id="DAD50553.1" /translation="MLADPQSVTVNAVAIPLPRTQAGVTQNIYTSADGVTTMTTKQNV TASRFRREVRLGQHKTVADPISGLNRDLGVSVYLVIDEPKYGFSDTEIGYLIDALKTW LSSANYNKVLGGEF" gene 1901..4066 /gene="Gephyllon.4_7_3" CDS 1901..4066 /gene="Gephyllon.4_7_3" /codon_start=1 /transl_except=(pos:1901..1903,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD50554.1" /translation="MKRPTMLVEAILRQAEVDLDLSVERDVSTLRHRCKHEGLPFLTI TLPTLSDALERGLESGRFSCPSSFSRHGSLPRFMGGFFNRVFTLDGELRDDACPDCVY FIRQISRFFKKLFIECLPKYNRKAVQHFVDVETELKDATSQMEKPDEYLDKVSGILWS QVFPEIDPLDLICHHGPGATAERLRSNDRHHIRSWNTRSELLFPSDLHCYPNYSVAVR VSGIGKELDVHEGPNFLHIRDELPVRVVFVPKTQLTPRVIAIEPSHVQYMQQSVKDYV YKVLETHALTKESIRFTRQDFNQKLARKGSIDKRTSTLDLKDASDRVHLHLVQRIFKT SGLLEYLEDARSLHALLPDGRNIVLSKYASMGSALCFPVEAMVFYTLVQCAMHQLDGR RPSSRSILNYSRKIDIYGDDIIIPVEYTDAVVNILESYALKVNVNKSFSKGNFRESCG ADYFKGTPVNPVYARRVPHDDSRDWGPSEVMSWTATSDLFYMRGKWIVAEAIRKMVSQ VVRRTIPKTRVIGSGIAFFSFLFTTDLRYDRDLQCWKQKRLQYQPTKKKDSIDGNELA CLNKWGQHVAARSGGFYSGYAGGDPLISQRILVRTEAEALLQPGQQSVSCECRVEQST PGVDAWVDQSRLCDLSVSLQDDEDESSLLTRLAEGSNSGGESPACLEYDFSADYCLTE EVQSDPLSFLDGRVDGLDFETSVKRGCFKSKSRWVTLAE" ORIGIN 1 ggggccctaa agcccctgcc tgcgtctacg gacgtaggct gtgggatgag gcttttgcct 61 catcacactt gctcactaac ccaaggtaag gattgttgtt tatggtcaag ggaagaaatt 121 tcgtaagccc gtcctattta ggaacggaat attacggtag ctcccctatc ggtgttaaga 181 cctacactac taatattgat attagtacta tgtgggtcgg agaccgtggc cactatggct 241 atccccatta cccagctgac aaagatgttg gcggtgcgtt ctacctcgaa ggagttagaa 301 caaaacgtaa cgtcttgcct ctgggtgaca ttcagcgtgg gaatccaaat ccgctcgacc 361 agcattatac tggcgggttg gctgtggata ttcctcatac tggtgcgtgg tcgtcgcagg 421 cttttcctgc agacccgtat ggggcaactg cctacaacag gatgaaaccg acgaaggctt 481 cctttggcac ttacaatagt ctctttgaga ctaaagattt gcctgggatg atagcagata 541 ttccatttcg tttttggaat actgctgttc aaaaccttca gcgggctgta cgctccttcc 601 gtgatggagg ggcaggccat ttcgtaggtt acgaatttgg ctggaaacag ctcgtccaag 661 acgtgcaaaa tatgtgctct cttcaacaga gaggacagaa aaggctcgct tggctcctgc 721 ataacaacaa taagccggtc cacacagcag tcacgctggt ggacaccttc gacattgtag 781 aagacctcgc catttcaggc tatggttatc tacaaccagt gttggtaaca cagtattatg 841 ctgtggaacc tcacggtcga aggctttcga ctaaccgaga aaaggtatgg gccgaaggca 901 catacctcta ttggttaccg gatgggcccc gcgatatcaa ttggactaat gccatgcttg 961 cgtccattta tggacaaaac gtgacagcag ccaatttata taaagcggtc ccgtggtcgt 1021 ggctccttga ctggtttaca aatgtcggca ctgtgttaca aaacatggat gccggcgttg 1081 cagcccggtt atggagtccg cgtaattatg tgatgcggaa aaaggaatgg acgattcaga 1141 ataccattac tggtcaattt ctggatcgtg cttccaaaag cctattcaca gccacgggta 1201 gctcttcaag tacggccttt gtaaagtgcc gtgcaagagg agatcccttt gggtttgcca 1261 ctaatcagaa tactcttagt ggcatgcagc aagcaatcat gggtgcactc ggtttgtccc 1321 gtctacgcta gctgtcaatt tgtaacagcg taaaatagta aggagctttc aagtgcttgc 1381 agatcctcaa tcggtaacag tcaacgcagt agcgattcct ctgccgcgca cccaggcggg 1441 tgtcacgcag aatatctata ctagcgctga tggcgttacc acgatgacca ctaagcagaa 1501 tgttactgcc tcgcggtttc gtagagaagt ccgtctggga cagcataaaa ctgtcgcaga 1561 cccaatttcc ggtttgaatc gggatttggg tgtttcggtc tatcttgtta tcgatgaacc 1621 gaagtatggc ttctctgata cggagatcgg ctatctgatc gacgccttga agacttggct 1681 atcttctgcc aattataaca aggtgctcgg aggtgagttc tgatggcagc gcaaacgatt 1741 ttggcagtat gtctctgcct gctcgttggt tgctgcatcg ggctcgtcct ctatcgtcac 1801 actaagattc tttgaatccg tgtaacgatt cagattgtcc cacgaaagtg gatgcctaag 1861 cttgaacggt cctgtttcca ccattgaaat ggaggttaca gtgaaaagac cgaccatgct 1921 cgtcgaggcc attctgcgtc aagcagaagt ggacctagac ttgtccgtag aacgcgatgt 1981 ctcaactttg agacatcgtt gtaaacacga agggttaccg tttttgacga taactctccc 2041 cactttatcc gatgctctcg aaagaggctt ggaaagtggg cggttctcat gtccttcgag 2101 tttctcgagg catggaagtc tcccccgttt tatgggaggt ttcttcaacc gtgtgtttac 2161 gcttgatggc gaactacgcg acgatgcttg cccggattgc gtgtatttta tccgacagat 2221 aagcagattc tttaagaaac tgtttatcga atgtcttcca aaatacaatc ggaaggcagt 2281 gcaacacttt gtcgacgtag agacggagct caaggatgcc acttctcaaa tggagaagcc 2341 agatgaatat ctggataagg tctccgggat cttgtggtct caggtatttc ctgagattga 2401 tcctttggat cttatatgtc atcatgggcc tggtgctact gcagaaagat tacgatctaa 2461 cgatcgtcat catatacgca gttggaacac taggtctgag ctactctttc cttctgacct 2521 tcattgctat ccgaattatt cggtagcagt tcgtgtcagt ggtataggga aagagttaga 2581 tgtgcatgaa ggtccgaatt ttctccatat cagggatgaa ctccctgtta gagttgtatt 2641 cgtgcctaag acacaactaa cgccgcgagt tatcgcaatt gagccttccc atgtgcaata 2701 tatgcagcaa tccgttaagg attatgtata taaagtgctg gagactcatg ctctgactaa 2761 agaatcgatc cgtttcacac ggcaagactt taatcagaaa ctcgctcgca agggcagtat 2821 cgataaacga actagtaccc tagacctgaa agatgcgtct gatcgggtgc atttgcacct 2881 tgttcagcgg atctttaaga cctcaggcct cctcgaatac cttgaggatg cgcgttcgtt 2941 acatgccctt ctgccggatg ggaggaacat agtcctgtcc aagtatgcct ctatgggttc 3001 agcattatgc ttcccagtgg aggctatggt gttttacacc cttgtacagt gcgctatgca 3061 ccaacttgac ggcagacgtc ctagttctcg atctatcctt aattattcta ggaagatcga 3121 tatctatggg gatgatatta ttatccctgt agagtacacg gacgcagtcg tgaatatcct 3181 ggagagctat gctctaaagg ttaacgtcaa caagtctttc tcgaaaggaa actttcggga 3241 gtcttgtggt gcggattact ttaaaggcac gccggttaat ccggtctatg ctcgtagagt 3301 gccgcatgac gattcacgag actggggacc atctgaagta atgtcttgga ctgcgacctc 3361 tgacctcttt tatatgagag gaaagtggat cgtagctgag gctatacgga agatggtcag 3421 tcaagtggtg agacgtacca ttcctaagac ccgcgttatt gggtccggga tagctttctt 3481 tagtttcctt ttcactacag atctccgata tgatcgggat ttgcagtgct ggaagcaaaa 3541 gaggctacaa taccaaccta ctaaaaagaa ggatagcatt gatggaaacg aactcgcctg 3601 cctcaacaaa tggggtcaac atgttgccgc tcgatctggt ggattctact ccggctacgc 3661 cggtggagat ccacttattt cacaacgaat actggtgcga accgaagctg aagctttgct 3721 acagcccggt caacagtcag tatcgtgtga atgtcgagtg gaacagtcaa ctccaggagt 3781 tgacgcatgg gtcgatcaaa gccgcctatg cgacctatct gtcagtctgc aagatgacga 3841 ggacgagtcc tcgttgctta ccagactggc tgaagggagc aacagcggag gtgaaagccc 3901 tgcttgcctc gaatacgact tctcagcaga ctactgcctg actgaggaag tccaatctga 3961 tcctctctcc ttcttagatg gaagggttga tggattggat ttcgagacta gtgtgaagcg 4021 cggctgcttc aagtcgaaaa gccgatgggt tactctagct gagtaacgtg ggctagtccc 4081 actggaggaa ct //