LOCUS BK013552 4303 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.1_12 genomic sequence. ACCESSION BK013552 VERSION BK013552.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.1_12 ORGANISM ssRNA phage Gerhypos.1_12 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Hohrdovirus; Hohrdovirus pedovicinum. REFERENCE 1 (bases 1 to 4303) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4303) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-4303 MN035153.1 1-4303 FEATURES Location/Qualifiers source 1..4303 /organism="ssRNA phage Gerhypos.1_12" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786193" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Hohrdovirus; Hohrdovirus Gerhypos.1_12" gene <1..1801 /gene="Gerhypos.1_12_1" CDS <1..1801 /gene="Gerhypos.1_12_1" /codon_start=2 /product="maturation protein" /protein_id="DAD50535.1" /translation="GEPVREHCCACRFRQGMPIHIRWSSCMAPIGPPQNSGRKDTRGL PEGYDPHMLYEYRYHVAKENASGLEKFAYQYLPKEFIKSSAFAIDPTGPFKVAPGVIT PANRTKVRQTASVLNRRQVHITRNVTSFAPRRNYGGVSGCNSPFIETIAPVQPDGYFD LRQQEPFPDVLHDTTSRTRLMGSKQGTLDYFKGFINSPSRRVSTHIVYDNVYNAFEYP PTDPCIVLAGGTAHDHNGGTDVHTNATVGAGAFLLSSSFHEIRNREQLYNTGLMQANA VNLLKGWSPFNRETTLFRNLVELRDIPRSVLQLQSTLRNLKTVFSSLATSTRLRKIVF DLKRTSKDIPNEYLSYHFGWKQTWKDVNELLASPGKISKRVKFLIDRSGKPTTFRSKR SFVSGASGVSAFDYEQFGDEYAQAYSSRVERTSELRLVINSTFDFPPPTGMRFFWREY YKRLGIEPRVTDVYNLVPWTWLVDWFTGLGNYVELIDNINHDPSLINWGMLSCHTAGK YITDYTSKSDRYYLSSVNGEAHNEGQPSRVSNPHTSVYDFECHTRSDVATILDVKTTA EPSTMTAYQQSIIGALLSQRLDFSRKGGFKPRS" gene 1829..2194 /gene="Gerhypos.1_12_2" CDS 1829..2194 /gene="Gerhypos.1_12_2" /codon_start=1 /product="coat protein" /protein_id="DAD50536.1" /translation="MLPDPVTVAASSPTPSLVLNIIKQDGYGSERVDTGGNGYSVIIN HTRGKNGNRHYVQMTQSVDATDPYSGLIRKQTASVSFSIQRPTFGFTDAAIVALAKAL TDFRDDGEVTTAKLIQFQS" gene 2439..4286 /gene="Gerhypos.1_12_3" CDS 2439..4286 /gene="Gerhypos.1_12_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50537.1" /translation="MKSPIALLRDLWVDIQRLDPDVKGLNRDFHTIEQRFEHEGYGFL TIALPSLDDALLLGLSSGRFTCPSGFKMIRGGTIPRFLSGMFCEVFDPFSGVLKQSLD EGVLKSLHQILRLFKKTQLSSDEEITLHEKAVSEFFRCDDQARQVILPDLLSHLIGCV SKVILFDLSSKSTSEFTFKHGPGAVEEGLKANQKWSALSNSIKNEEFDLDAYGYADYS VCLSDLSERAVANDSMRPIDPFSGVSRSTARLITVAKNSTSRRTITVEPLLNQFIQQG LNIALRDSIVACPILSGCLALTDQSKNQTLALEGSLYDNWATIDLKSASDLMSVSLVK TVFGHHAWFYKHMMACRSTSVKSGSLTASDLGKFAGMGNALTFPAQSICFAVVCIAAI LHQNQEYGSYWQIKRASRHIRVYGDDIIIDTRYAHQCVNWLHDAGLKVNVKKSFLQGN FKESCGVEAYKGVDITPLYIRHRPDQTSTEPSVIGHLVALSNQAWLCGYYKFSTCLRN EVEERLGYSLPLVSRESGSLGWHSRQDAMTPHKWCKRTHQFLTRTAVLISLKRKDKLD GYAALLKFFHVPLLGRARNHLNESSIRYKLRIVLKWVPTLSRDGLNLQV" ORIGIN 1 gggtgagcca gtgcgtgagc actgttgtgc ctgtcgattt agacagggca tgcctattca 61 catcagatgg agtagttgca tggcaccgat aggacccccc cagaattccg ggagaaaaga 121 cactcgcgga cttcctgagg gatacgatcc tcatatgtta tatgagtatc ggtaccatgt 181 agctaaagaa aacgcttctg gtttggagaa gtttgcttac cagtatctac ctaaggagtt 241 tattaagtcg tcagcttttg ctatcgaccc aacgggcccc tttaaagtag cacctggtgt 301 cataactcct gccaatcgta ccaaagtaag acagacagcc tcggttctta accgccgaca 361 agtccatatt actcggaatg ttacctcctt tgcacctcgt agaaattacg gtggtgtttc 421 tggttgtaat agtccgttta ttgagacgat tgcgccggta cagccggatg gttattttga 481 cttgcgtcaa caagagccat tcccggatgt actccatgat actacgagcc gtacacgtct 541 aatgggaagt aaacaaggta ccttggatta tttcaagggc tttattaact ctccctctag 601 gcgtgttagc acgcatattg tctacgataa cgtgtataat gcatttgagt atccaccgac 661 cgatccttgt atcgtccttg cgggcggtac agctcacgat cataatggtg gtactgatgt 721 gcatactaac gcaaccgtag gcgctggagc gttcctttta tcgtcatcct tccatgagat 781 acgaaatcgc gaacagttat acaacactgg ccttatgcaa gccaatgctg ttaatctgct 841 aaagggctgg tctcctttta atcgggaaac taccctcttt cgtaatctcg ttgaactgcg 901 agacattcct agaagtgttc tgcaattaca gagtactttg cggaatctca agacagtgtt 961 ttcttctctt gcgacgtcca ctagacttcg aaaaattgtt ttcgatctca agcgtacgtc 1021 aaaagacatc ccaaatgagt atttgtcata ccattttgga tggaagcaaa cctggaagga 1081 tgtcaatgaa ttgttggctt ctcccgggaa gatcagtaag agagttaaat ttcttattga 1141 tcgatccgga aagccaacaa cctttcgctc gaaacgatct ttcgtttcag gtgcaagtgg 1201 ggtctcggcc ttcgactatg aacagtttgg tgatgaatat gcgcaagctt attcatcccg 1261 ggtggaaaga acatctgagt tgcgtttagt tataaactca acttttgatt ttcctccgcc 1321 aactggcatg cgattctttt ggagagaata ctacaaaaga ctcggtatcg aaccacgtgt 1381 aacggacgtt tataatctcg tcccttggac atggttagtt gattggttta ctggtcttgg 1441 taattatgtc gaattaatcg acaatattaa ccatgacccg tctcttatca actggggtat 1501 gctttcctgc catacagcag gtaagtatat caccgattac acgtcgaagt cagatcgtta 1561 ctacttatca tcagtcaatg gtgaggctca caacgaggga caaccgtccc gagttagtaa 1621 tcctcatacc agtgtctatg acttcgagtg tcacactcga agtgatgtag caacgatact 1681 tgatgtgaag acaactgctg aaccgtcaac tatgacggct tatcagcagt ccatcatcgg 1741 agcgttactt tcgcaacgcc tcgattttag tcgcaagggt ggctttaagc cacgctcgtg 1801 acgccattta tttcacaagg agacgtctat gctacctgat ccagttaccg ttgccgcttc 1861 atccccgacg cccagcttgg tgcttaatat catcaagcag gacggttacg ggtctgaacg 1921 tgttgatact ggtggtaacg gttattccgt tatcatcaat cacacgcgtg ggaaaaatgg 1981 taatcgacac tacgttcaaa tgacgcagtc tgtcgatgcc actgatcctt acagcggttt 2041 gattcggaag caaactgctt ccgtctcatt ctccatccag cggcctacgt tcggcttcac 2101 cgatgcagcg attgttgcac tggcgaaggc tcttacggat ttccgcgatg atggagaggt 2161 aaccactgcc aagttgatcc agtttcaatc ctgatggttc actggaggag acgatatgtc 2221 ccgtccggcg actacaggaa agacctggtt cgcatttggc atgtttatgt ctgggtttgc 2281 ttcgggcttg ttctgtttgt tacaggactc gcctatttgc acatccatca ctaaaacata 2341 ccaggcaacc ctttaggggg gccagcagtg aatgatcatt cgctgatcgt agagaaaggt 2401 aatatagact tggaatcgct ttcctcaagg aggtaacgat gaaaagtcca atagctctcc 2461 tacgagacct ctgggttgat attcagaggt tagatcctga tgtgaaaggc ctcaatcgtg 2521 attttcacac gattgagcaa aggttcgaac acgagggcta tgggttccta accatagctt 2581 taccgtcttt agatgatgcc cttttattgg gcctctcctc tggacggttc acctgccctt 2641 ctggttttaa aatgatcaga gggggaacaa tccctagatt tctctcgggt atgttctgtg 2701 aagtgttcga tccgttctcc ggtgtactta aacagtccct cgacgagggg gtattgaaga 2761 gtcttcatca gattcttcgc ctgtttaaga aaactcagct gtcttcagat gaggagatta 2821 ctcttcacga gaaggcggtt tctgagtttt tccgatgtga tgaccaagct cgtcaggtta 2881 tattgcctga cttgttaagt catttgatcg ggtgtgtctc aaaggtgata ttgttcgacc 2941 tttcatctaa gtcgaccagt gaattcacct ttaagcacgg ccccggagcc gttgaagagg 3001 gccttaaagc taaccagaag tggtcagcct tgtcgaactc aataaagaat gaggagttcg 3061 acttagacgc atatgggtat gctgactaca gcgtgtgtct ttcagattta tctgaaagag 3121 ctgtagccaa cgactcgatg cgtcccatag acccttttag cggagtctct agaagcactg 3181 ctaggcttat tacggttgcg aagaattcta cttcacgccg tacaatcact gtggaaccct 3241 tgctgaatca atttattcag caggggctta atatcgcact acgcgacagt attgtcgcct 3301 gtccgatact cagtggttgc ctagctttaa ccgaccaaag taagaatcaa acccttgctt 3361 tggaaggctc cctttacgac aattgggcaa ccatcgattt gaagtccgca tcggatctca 3421 tgagtgtttc actcgtgaag actgtattcg gacatcatgc ttggttttac aagcatatga 3481 tggcttgccg ttctacctcg gtaaagagcg gctctttaac cgcttctgac cttggtaaat 3541 ttgccggaat gggtaacgct ttgacttttc cagcacagag tatctgcttt gcggtagttt 3601 gcattgcagc tattctacat cagaaccaag aatatggttc ttactggcaa attaagcgtg 3661 cttctaggca tattcgagtc tatggtgatg atattatcat agatactcga tatgcgcatc 3721 agtgtgtgaa ctggcttcat gacgctggcc taaaagtcaa tgtcaagaag agcttccttc 3781 aaggtaactt caaggaaagc tgcggtgtcg aagcgtataa gggtgttgac ataacacctt 3841 tatatattag gcaccggcca gatcaaactt caacagagcc tagtgttatt ggacatcttg 3901 tagcgctcag caaccaagca tggttgtgtg ggtactataa gttttccacc tgtcttcgga 3961 atgaagttga agagagatta ggttactctc tcccgcttgt atccagagaa tctggttcac 4021 tagggtggca tagtcgtcaa gatgcgatga caccacataa gtggtgtaag cgtacacatc 4081 agttccttac taggactgct gttcttatct ctctgaaaag gaaagataag ctcgacggtt 4141 atgccgcact cctcaagttc tttcacgttc cccttctcgg gagagcgcgt aatcacttga 4201 atgagtcttc aatacgatat aaacttcgta ttgtgttgaa gtgggtgccg accctttcta 4261 gggacggttt aaatcttcag gtttgatcct gaagtcagag atg //