LOCUS BK013544 3840 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.1_23 genomic sequence. ACCESSION BK013544 VERSION BK013544.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.1_23 ORGANISM ssRNA phage Gerhypos.1_23 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Bahnicevirus; Bahnicevirus chthonenecus. REFERENCE 1 (bases 1 to 3840) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3840) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-3840 MN033433.1 1-3840 FEATURES Location/Qualifiers source 1..3840 /organism="ssRNA phage Gerhypos.1_23" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786205" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Bahnicevirus; Bahnicevirus Gerhypos.1_23" gene 95..1447 /gene="Gerhypos.1_23_1" CDS 95..1447 /gene="Gerhypos.1_23_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50506.1" /translation="MFIDHGTTKRRQLPGPTLQVTSRWKKPITGAYRPSTTYSTPIYG TQITESDTNRWPLPKGSGAVDSGSEFYSLKCEVLGKKFPHTSLYTGAVPENGVFGNAE GTFYLANAFQDSTGQPLSSTLKKVAPVYADLSSDRAALNVKGSIAVAACNPGNQLANV ASGVGELLQDVPNIPGVALWESRLKGLVAVAAGADEFLNYIFGINPTLGDMMDFLKAT HKVDKRIDQFERDSGRVVRRKFHFPKERDESEQVVFNTYSPVGCTSPHGTNELLGNFQ YVFPVYETVRHRVIERETWFSGAFTYYLPSWYETGNRSDRIKLTAKLLGAEPDLNTLW QLTPWSWAVDWFSNAGSFVKNVQSLISYGTILRYGYVMETTTVTDTYTAGAMTHLPDA THQVAFKPPYPAVAPVTVRTTVKKRIKANPFGFGISWDGLSTTQQAIAAALGITRAVR " gene 1481..1873 /gene="Gerhypos.1_23_2" CDS 1481..1873 /gene="Gerhypos.1_23_2" /codon_start=1 /product="coat protein" /protein_id="DAD50507.1" /translation="MFTDPISLTPGASFDAGAVSLPRVSQQGTTSVYQAGPLSVNAGS LLRVTASHQYGRRIRRVLRCDYSDNAGSTLVSGTTAPRSISCYVVFDLPNAGLFNATD QLALFNGLKTTWSASTDALIKKVLGGES" gene 1958..3760 /gene="Gerhypos.1_23_3" CDS 1958..3760 /gene="Gerhypos.1_23_3" /codon_start=1 /transl_except=(pos:1958..1960,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD50508.1" /translation="MKSLIVLWKSIAATLAMRCCTSAHHDLKTVEDRSKYEGLSFLTI TLPTFAKDFERCLELGYVDNASFLSFKKRGSLPAFLQGFSCLVFDRRTGVLLDDPDIQ AIQAIRQLTLLFGKILLECEQHRIDAAFSEFVECEKEVGERLGAADFSAFRRIRTLLF GSVFSSVDSDVYYGRLIPKHGPGATADRLVGNQKYHQVSWPIRLEPFFPYGEMVLPNW SYWEQLGEVNFLEPGAEIPVKVISVPKTMKTPRIIAVEPTAMQYAQQAILRSFLEAVD VSTVKGFIGFDDQEPNQLLARQGSLGEGLATLDLSEASDRVSSECVSQLLCDHRFFHD AVFACRSTRARLPSGDVMSLAKFASMGSALCFPMEAAVFLTAIFVGIEQDLGHPISKR EINSFLGRVRVFGDDIIVPSDHVRSVIASLEYFGLKVNTRKSFWNGKFRESCGREWYD GTDVSVVRVRRLLPSSRKDVQEIISTVSLRNQLFRVGLEHAVDLLDRRMFRILGHFPV VEERSPVLGRHSYESVYPDSQLRHSIPMVKGWMIRPVIPKNEITDWPALRKCLALLEA RPEGAITATSSDHLRRSGRPRVVDIKLGLGPVGL" ORIGIN 1 ctgctgtgga gcagggggtg cgcagtgcac caccgttcgc attgcattgt tgtatgaata 61 atacaacaat acaatctatc caaaggagcg ttccttgttc atagatcatg gtacgaccaa 121 gaggcgtcag cttcctggtc ccactttgca ggttacaagc aggtggaaaa agccgattac 181 tggtgcttat cgccccagta cgacctatag taccccgatc tatggcactc agattactga 241 gtcggatacc aatcggtggc cacttccaaa agggagtggc gccgtcgatt ccgggtcaga 301 gttttattct ctgaagtgtg aagtgttggg gaagaaattc ccacatacat cactttacac 361 tggtgcggtt ccagaaaatg gtgtcttcgg caatgccgag ggtaccttct atctggcaaa 421 cgcattccag gattcgactg gtcaaccgtt aagcagcaca ctgaaaaagg ttgcacccgt 481 ttacgctgat ctgtcctctg atagggcagc tctcaacgtg aaagggtcaa tcgcagttgc 541 tgcttgtaac ccgggaaacc agcttgctaa tgttgcttcc ggcgttggtg aactcttgca 601 ggacgtaccc aatattccgg gtgtcgccct gtgggagagc cgcctcaaag gtcttgtggc 661 ggtagccgca ggtgcagatg agtttctcaa ctacatcttc ggcattaacc caacactcgg 721 cgatatgatg gactttctta aggccactca taaagtcgat aaacgaatcg accagttcga 781 acgtgattct ggtcgggtcg ttcggcggaa gtttcatttt ccgaaggaac gagacgaatc 841 tgaacaggtt gtcttcaaca cgtattctcc tgtggggtgt acttcgcccc atgggactaa 901 cgagttgctt ggcaactttc agtacgtctt tccagtgtat gagaccgtga ggcatcgagt 961 cattgaacgt gaaacatggt tcagtggagc ttttacctat taccttccta gctggtacga 1021 gaccggcaat aggtcggata ggataaagct cacggctaag ctccttggag ctgaaccgga 1081 cttgaatacc ttgtggcagc tcacaccctg gagctgggcc gttgactggt tctcgaatgc 1141 gggttctttt gttaagaacg tgcagtcgct tatcagttac ggcacgattc tgcggtatgg 1201 gtacgtgatg gaaactacaa ccgtcacaga cacctatact gcaggggcga tgacgcatct 1261 acccgatgcg acacatcagg tggcttttaa accaccttac cccgccgttg ctcctgtgac 1321 tgtaagaact acagtcaaga aaaggatcaa ggcgaatccc tttgggtttg gcatcagctg 1381 ggatggactc tcgaccaccc agcaggccat agctgcagct ttgggaataa ccagagctgt 1441 gcggtaggta atctgcccac caacgtaaag gagcacgtcg atgttcacag atcccatctc 1501 cctcactccc ggagcgtcgt tcgacgctgg cgcggtgtcg cttccccgtg tttctcaaca 1561 gggaacgacc tccgtgtacc aggccggacc tctctccgtg aatgctggga gtctactgcg 1621 tgttactgcg tcccatcaat atgggcgcag gatccgcagg gtccttcgct gtgattacag 1681 cgacaacgcg gggagcacgc tcgtgtcggg tacgacggca cctcgtagca tctcttgcta 1741 cgtggtgttc gacctcccga acgcgggctt gttcaacgcg acggatcagt tggccctctt 1801 caatggtctc aagaccactt ggagtgcctc gaccgacgcg ctgatcaaga aggttttggg 1861 cggcgaaagc tagcccttac ctttcctgat cagtccaacg cgttctgatt aggacgtgca 1921 catcggctta ggacccgttc ctctatcagg aggttaggtg aaaagcctaa ttgtgctctg 1981 gaaaagcatc gctgcaactc ttgcgatgcg atgttgcact agcgcccacc acgaccttaa 2041 aacggtcgag gatcggtcga agtatgaggg tttatcgttt ttgacgataa ccctgcctac 2101 ctttgcgaaa gacttcgaaa gatgtcttga gctcgggtat gtggacaacg cctcttttct 2161 gtcttttaag aaaagaggga gtctccctgc ctttttgcag ggtttctctt gtctcgtctt 2221 cgaccgtagg acgggtgtcc tacttgacga cccagatatc caagcgattc aagccatccg 2281 gcagctaacg ctgctgtttg gtaagattct cttggagtgt gagcaacatc gaatagatgc 2341 tgctttctct gagtttgttg agtgtgagaa ggaagttggc gagcgattag gcgctgcaga 2401 tttttctgca tttcgtcgta ttcgcacgct actcttcggc tcggtcttct cgtctgtaga 2461 cagcgatgtc tactacggga ggcttatacc gaagcatggc cctggtgcta ctgctgatcg 2521 cctcgttggc aatcaaaagt atcaccaagt tagttggcct atccgcctcg aaccattctt 2581 cccttatggg gagatggttt tgccaaactg gtcctattgg gaacagcttg gtgaggtgaa 2641 cttcctcgaa cccggtgcgg agatacccgt taaggttatc tccgttccta agacgatgaa 2701 gactcctcgg atcattgcgg ttgaaccgac tgctatgcag tatgcgcagc aggcgattct 2761 ccgctcgttc cttgaagccg ttgacgtttc tactgtcaag ggctttatcg gctttgacga 2821 ccaggagcct aaccaactcc ttgcgcgtca agggtccctc ggtgagggtc ttgctacact 2881 cgacttgagt gaagcttccg atagagtctc atccgagtgc gtttcgcagc tgctttgcga 2941 ccatcgcttc ttccatgatg cggtgttcgc ttgcagaagt acgcgcgctc ggctacctag 3001 cggggacgtt atgtctctcg ctaagtttgc ttctatgggt tcagccctgt gctttccaat 3061 ggaggccgca gtttttctca ctgcgatctt cgttggcatt gagcaggact taggacaccc 3121 tatttccaag agggagatta actcctttct tggaagggtg cgtgtctttg gggatgatat 3181 tatcgtcccc tcagaccacg tgcgctccgt gattgctagc cttgagtact tcggtctcaa 3241 ggttaacacg cgcaagtctt tctggaatgg taaattccgg gagtcttgcg ggagggagtg 3301 gtatgacgga acggacgttt cagtggtccg tgttcgtcgt cttcttccct cgtcacggaa 3361 ggacgttcag gagatcattt cgactgtttc gctccggaac caactctttc gcgttggtct 3421 tgagcatgcg gtcgatcttc ttgaccgtag aatgttccga attctcgggc attttccggt 3481 cgtggaagaa cgatctcctg tacttggtcg gcatagctac gagtctgtat atcctgattc 3541 gcagctaagg cattcaatcc ctatggttaa gggttggatg atccggcccg tgatcccgaa 3601 gaacgagatt acggactggc cggccttgcg taagtgtctt gcgcttcttg aggcaagacc 3661 cgagggtgct attactgcca catcctcgga tcacttacgc cgttctggac gcccccgagt 3721 cgtcgacatc aaactcgggt tgggccccgt aggcctttag ggcctcgtga ctgtgtccgc 3781 tctcgcggca cggtggggag ttaaccaagg agtcaggacc tagtcctgac aagtctcttt //