LOCUS BK013778 3636 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.1_28 genomic sequence, sequence. ACCESSION BK013778 VERSION BK013778.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.1_28 ORGANISM ssRNA phage Gerhypos.1_28 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Condavirus; Condavirus arvivicinum. REFERENCE 1 (bases 1 to 3636) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3636) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN033733 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3636 /organism="ssRNA phage Gerhypos.1_28" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786210" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Condavirus; Condavirus Gerhypos.1_28" gene 362..1483 /gene="Gerhypos.1_28_1" CDS 362..1483 /gene="Gerhypos.1_28_1" /codon_start=1 /product="maturation protein" /protein_id="DAD51293.1" /translation="MSYSKVKTDEIHDPVSGHPIWSKSREWNTQRKPWIHPLPFNLVL LYFVDFKGYYLDGGTTVPRGISNVYSWAPLEYLGDSDLGRAVNKARESFLNSMHDVAQ NANNVKEINQNVSAVTSKVKALATAVSAIKKGNVTGAAKALGVKLSGTQKQKIIKRLK QPADAWLELHFGWIPLVQDIGNSIENIQGTGKAPTGSTSIRVTGRGGSGGSNYQDTTA AYWWPSHNESLWICGCRCAARVKVENPNSALANQMGFVNPLSVAWEAVPFSFVVDWFT NVGQCLSAMTDFVGYSVEESYTTTFRRTTTRWQSYTTADAGPLSGSYSDIKTCQVHVT REQGIAGPTLRIKPFKGFSIERGATAVSLLVQQLSRLQS" gene 1504..1905 /gene="Gerhypos.1_28_2" CDS 1504..1905 /gene="Gerhypos.1_28_2" /codon_start=1 /product="coat protein" /protein_id="DAD51294.1" /translation="MPAAANITVKKSDGTTDIVWTAIAASGGDKSPAYFRSDTATGTV GQKPIFSVVARQNAAGDVRRVDVSGSFPSVYTNASTGQSEVRSKMNFSGSFAVPQNIT AADINEFSAQIPNLIASALIKATIAAGFAPT" gene 1955..3556 /gene="Gerhypos.1_28_3" CDS 1955..3556 /gene="Gerhypos.1_28_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51295.1" /translation="MISHYVKKVALEFFEGIATPKSLAAYLLLENGEWDQLATLEADP SNYFDPTSYWRDASAVSFLRKYEPLPTSFDRKKVAEESFVSCERSCFRANQRLYPILE DVLNVSHELSGVNAVFLQARKNIARILGPCPDEVSGRFGPGSTFGDRARLTTVPDKMS SEPLFTPDAWPFLFPWSGTMWASACVDIGKVPKSVPGNRFLTVPKDATKYRGIAVEPS INVFYQLAYGKVIRTRLRRWGINLDEGQDIHRRLASEASIQGHLATLDLKNASDTISR NLVKLLLPHSWFKVLDALRSKKTLFKGNYVLLEKFSSMGNGFTFELETLVFLGLISAI TGYDSVGKSVFAFGDDLILPTDSSKDVISMLRFCGLETNLKKSFSTGRFRESCGGDFF DGVGVRPFFLKDDPDQPASRISLANGLRRSSASHCGRWLMTRDAWRESLWGIPSSIRR LRGPQDLGDIVIHDERPTWKYHWAHGIRYIQTYQPRPRRNVRWGRFAPSVTLASAVYG QAWNEGYVLPRDPVLDYVVSAVPFS" ORIGIN 1 accctctgat cttttgaatt tagcaatttg ctttattcat tagattagat tggtccctct 61 tctctcttca accactttgg ttgaagccct acaatagtag ggatctttag atgggctctt 121 ctttagagcc tggctctctc gccaatcagg gtttagaccc ctggacatct atatggccta 181 tgcaattacc ggcgttacgc cgtcctcaaa atggactcga aagagattct tctcctcctt 241 ggccttcttg tggaggtcat tactgacctt attgcctggc ttagttcttt acccgacgca 301 agtcagtaaa gttcttgaca tagccgccta gcaagcgggt ccgtagctta gaaaactacc 361 tatgtcttat tccaaagtaa agaccgacga aatccatgat ccagtgtctg gtcaccctat 421 ttggtcgaaa agtcgtgagt ggaacactca gagaaagcct tggattcatc cactgccttt 481 caatttggtt cttctctact tcgttgactt taagggttac tacctggatg gtggtacgac 541 ggtcccccga ggaatatcta acgtttactc ctgggctcct ctcgaatact taggggattc 601 tgatctgggt cgtgccgtga ataaagcaag ggaatccttt cttaattcta tgcatgacgt 661 ggctcagaat gccaataatg taaaagagat taaccagaat gtaagcgctg tcacttccaa 721 agtcaaagcc cttgcgacag ccgtttcggc tatcaaaaaa ggcaatgtca cgggagcggc 781 taaggccctt ggcgtgaaac tgtccggaac gcaaaaacag aaaatcatca aaaggttgaa 841 acaacctgct gatgcttggc tggaactgca cttcggttgg attccgctgg ttcaagatat 901 tggtaacagt atcgagaaca tccagggtac cggtaaggcg cctactggta gtaccagtat 961 tcgtgttacc ggccgtgggg ggtctggcgg tagtaactac caagatacta ctgctgcgta 1021 ttggtggccc agccacaatg aatcattgtg gatctgtggc tgccgttgcg cagctagggt 1081 taaggttgaa aaccctaact ccgcccttgc taatcagatg gggtttgtga atcccctatc 1141 tgtcgcgtgg gaggccgtgc cttttagctt cgtcgtcgat tggtttacga atgttggtca 1201 atgcttgagt gcaatgactg acttcgtcgg ctattctgtc gaggaatcct acacgaccac 1261 cttccgtaga acaaccacgc gatggcaatc atacaccact gcagatgctg gtcctttgtc 1321 tgggtcctac tcagacatta agacctgcca agtgcatgtg acgcgtgaac aaggcatcgc 1381 tggtcccact cttaggataa aaccttttaa ggggttttct attgagcggg gggccacagc 1441 agtttcgctg ttggtccaac aactctctag gttacaaagt taacctaata aggaggctgg 1501 tatatgccgg cagcagcaaa cattaccgtc aagaagtctg acggtaccac ggacatcgtt 1561 tggacagcca ttgctgcttc tggtggtgac aagtcccctg cgtactttcg cagcgatacg 1621 gcaaccggga ctgtgggcca aaagcccatc ttctcggtcg tcgctcgcca gaatgccgca 1681 ggtgatgtgc gtcgcgtcga tgtctcggga tctttcccga gcgtttacac gaacgcctcc 1741 accggccagt cggaagtccg cagcaaaatg aatttctcag gttccttcgc ggttcctcag 1801 aacatcactg ctgcggacat caacgagttc tcggctcaga ttccgaatct gatcgcgagc 1861 gcgttgatca aggccacgat cgcagccggc tttgcgccga cttgatcgcg tgagacccta 1921 acgggtcttt cctgttcctt ctggagaagt taccttgatt tcacactacg tgaagaaggt 1981 tgccctcgaa tttttcgaag gcatcgccac acccaaatct cttgcagctt acttgctgct 2041 cgagaacggt gagtgggatc agcttgccac cctggaagct gatccgagca actactttga 2101 tcctaccagc tattggcgtg atgcctctgc tgttagtttc ttacgcaagt acgagccgtt 2161 gccaacctca ttcgaccgca aaaaggtcgc tgaggagagt ttcgtttcgt gcgagcgtag 2221 ttgctttaga gctaatcaac gactataccc gatactggaa gacgttctca acgtctccca 2281 tgaattatcg ggcgtgaatg cagtttttct gcaagcacga aagaatatag ctcgtatctt 2341 aggtccctgc cccgatgaag tatcggggcg gtttggacct ggctctactt ttggcgatcg 2401 tgcaaggctc actacggtgc ctgacaaaat gtcaagcgaa ccgcttttta cccccgatgc 2461 ttggccgttc ctatttcctt ggagcggcac gatgtgggct tctgcctgcg tcgacattgg 2521 gaaggtgccg aagtctgtac ccgggaaccg ctttcttacg gttccgaaag acgctactaa 2581 gtaccgcggc attgccgttg aacctagtat taacgtcttc tatcagcttg cctatggtaa 2641 ggtgattcgg actcgacttc gccgttgggg aatcaacctc gacgagggac aagacattca 2701 ccggcggtta gccagtgagg cctctatcca aggccatctt gccaccttag accttaaaaa 2761 cgctagcgat accattagca ggaatctggt aaaactcctg cttccccatt cttggttcaa 2821 agtgcttgac gcactgaggt caaagaagac tctcttcaaa gggaactatg ttctccttga 2881 gaagttttct tctatgggta atggtttcac ctttgaactt gagacccttg tttttttggg 2941 cctcatttcg gccatcactg gctatgattc agtgggtaag tcagtcttcg cctttggcga 3001 tgatttgatc ttgcctaccg actcatcaaa ggatgttatc tcgatgctgc gtttttgtgg 3061 cctcgaaact aacctgaaga aatctttttc gacaggtcgg tttcgtgaaa gctgtggtgg 3121 tgatttcttt gatggagttg gggttcgccc tttcttcttg aaagatgatc ctgatcagcc 3181 agcctctcgc atctctctag ctaacggcct ccgtagaagc tctgcttctc actgtggccg 3241 ttggctaatg actcgtgatg cctggaggga gtccctttgg ggaatacctt ctagcatccg 3301 acgtctccga ggtcctcaag acctcggtga cattgtcatt catgatgaga gacccacgtg 3361 gaagtaccac tgggcgcatg ggataaggta cattcagacc tatcagccac gtcctcgcag 3421 aaatgtgagg tggggccggt tcgctccgtc tgtaacccta gcgagcgctg tgtatgggca 3481 ggcctggaac gaggggtacg ttttacctcg cgatcctgtg cttgactatg tagtcagcgc 3541 ggttcctttc tcttaagggt ttttcccttt tgggggagtt ccggctttat gccggtggat 3601 tgaaggttat accttcttaa gtaaaaatct gcgaag //