LOCUS BK013859 3562 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.1_29 genomic sequence, sequence. ACCESSION BK013859 VERSION BK013859.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.1_29 ORGANISM ssRNA phage Gerhypos.1_29 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Condavirus; Condavirus arvivivens. REFERENCE 1 (bases 1 to 3562) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3562) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN033629 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3562 /organism="ssRNA phage Gerhypos.1_29" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786211" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Condavirus; Condavirus Gerhypos.1_29" gene <1..272 /gene="Gerhypos.1_29_1" CDS <1..272 /gene="Gerhypos.1_29_1" /codon_start=3 /product="hypothetical protein" /protein_id="DAD51576.1" /translation="GDPLHTYGVTMLAELILAVVLIVCSIFAPASVNQPIDDLTIING VLCRLSPVIKSDADYSKNSSLLPSCGNLVGRNYPVSSSSPSRGGL" gene 269..1336 /gene="Gerhypos.1_29_2" CDS 269..1336 /gene="Gerhypos.1_29_2" /codon_start=1 /product="maturation protein" /protein_id="DAD51577.1" /translation="MTKYRTGYLLHPDGSAAMRFQRYWEVQSPPYKRPLGYQYSIATI AGGSNLHDGTISYPSCDTLGLGNSSRDKESEVSSLCYGKFVGKLGESSMWANNLHEAN QSISGAASRLLQIGRFASALRKGNIVKAAKILGTPVPKKLKGLKAKAKSFGDQFLEFH FGWVPLIQDVHSAMQTLSSPNFDTRNVIATAQVYDYYLDRIDDWAYPWHYVSVVTRQV TWHCKMGARVRISNPNAYLANQLGLVNPASIAWEAVPFSFVADWFGNVGQVLASATDF VGLEIDTTYTTTSLEMHEAGHGYTNRDQDPWDTWYYAGKLFKVGRSAYIASPVLHLKP FHGLSLTRGVTAISLLLQKLK" gene 1364..1765 /gene="Gerhypos.1_29_3" CDS 1364..1765 /gene="Gerhypos.1_29_3" /codon_start=1 /product="coat protein" /protein_id="DAD51578.1" /translation="MTAAADITVKKADGTTDILWSVLAGSGGDSAPAIWRSNTAAGTI GQRPTFQITSKWNGPKTARRVDIAGSFPSVYTNSSTGQTEVRGTIPFVASFGVPVNIA AADLNEAAAQLCNLMASVMTKGAVSSGYAPS" gene 1822..3480 /gene="Gerhypos.1_29_4" CDS 1822..3480 /gene="Gerhypos.1_29_4" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51579.1" /translation="MIETLSRDLHDIVSALCSDVASPRSLSVEILMRYGEWDQLANLR IDPLHYSDPSSLWGDTLVTEILRKMSDLPTTFDRKAVSEEAFLSCEMQCFSSNRRLER LLFPGDHIFSAGDLMARSIFERARNLVGTVLGPFPTTLLDGKFGPGATFGDKGGRSTI PDKMSSEPTLTPSAWTSLSSWRSTAWARACAEDGRLPQVVEGNRFTTVPKDCTKDRGI AVEPSINVFYQLSVGKLIRSRLRRLGIHLDEGQDIHRRLACEASDDGHLATLDLSNAS DTICKNLVEFLLPPSWFSVLNDLRSPKTFFKGKYHFLEKFSSMGNGFTFELETVIFHC LTVACCELRVSDPFVSCYGDDLIFPTECSEDVMSFMKLAGFTVNTRKSFTTGYFRESC GGDFFKGVPVRGHYLKESPSTPSHFISLANGLRRSATEDRFSTVYRAWRKCLDRLPVQ IRSCRGPLALGDLVIHDSEDRWNKIHRNSIRYIRVWRPSRFRKIAWDRFKPSVTLASA LYGVDSGGPSGIRINGSRCAPWSSYGVSPRDNVLGHKLGWVAYS" ORIGIN 1 tcggggaccc tctacacacc tatggagtta ccatgttagc tgaattgata ctcgcagtcg 61 ttttgatagt ttgttctatc tttgcgcccg cgtctgtcaa tcagcctatt gatgacctta 121 cgatcatcaa tggtgtgttg tgccgtctta gtcctgtcat caagtctgat gcggattatt 181 ccaagaacag ctctttgctt ccttcttgcg gcaacttggt cgggcgtaac tatcccgttt 241 catcttcctc cccttctcgg gggggtctat gaccaagtat cgtactggct accttcttca 301 tcctgacgga agcgcagcga tgcgcttcca gaggtattgg gaagtccagt ctcctcctta 361 taagaggcct ctgggttacc agtattctat agcaacgatt gctggcggat ccaacttaca 421 cgatggaact atctcctacc cctcttgtga tacattgggg ttggggaatt cctctcgtga 481 taaggagtct gaagtcagtt ctctttgcta tgggaagttc gttggtaagc ttggtgaatc 541 ttcaatgtgg gctaataacc ttcatgaagc caatcaatct atatccggcg ctgcttcccg 601 tcttctgcag atcgggcgtt ttgcttctgc cttacggaag ggcaatatcg tcaaagctgc 661 gaagattttg gggacgcccg ttccgaagaa actcaaggga ctaaaagcca aagccaaaag 721 ctttggcgac cagtttcttg agttccactt cggttgggtg cccctgatcc aagatgtgca 781 ctctgctatg cagacacttt cgagtccgaa tttcgatact cggaatgtga ttgcaactgc 841 ccaagtctac gattactatc ttgataggat cgatgactgg gcttatccat ggcactacgt 901 ctctgtggtt acacgtcaag ttacgtggca ctgcaagatg ggcgccaggg ttaggattag 961 caatcctaac gcatatcttg ccaatcagct gggtttggtt aaccccgctt cgattgcctg 1021 ggaggctgta cctttttcgt tcgtcgccga ttggttcggt aacgtaggcc aagttttggc 1081 ttccgctact gacttcgttg ggttggaaat tgataccacc tatacgacga cctcccttga 1141 aatgcacgag gccgggcatg gttatactaa cagagaccag gatccttggg acacctggta 1201 ttatgctggt aaattgttta aggttggcag gagcgcttat attgcgtccc ctgtccttca 1261 ccttaagccc tttcacggtc tttctctcac tcggggtgta acagcaattt cgctgttact 1321 ccagaaactg aagtgagtta tctctctctc tggagcttat cttatgaccg cagcagcgga 1381 tatcaccgtc aaaaaggcgg atggcactac cgacattctt tggagtgtcc tggcaggtag 1441 cggtggcgat tccgcccccg ccatctggcg gtccaacacg gccgcgggta cgattggaca 1501 gcgtccgact ttccagatta cctcgaagtg gaacggtcct aagaccgccc gccgcgtgga 1561 tatcgccgga agttttccgt ctgtctacac gaactcgtcg accggtcaga ccgaggtgcg 1621 agggacgatc ccgttcgttg cgtcgttcgg cgttcctgtg aacatcgccg ccgccgatct 1681 caatgaggcc gcagctcagc tgtgtaacct catggcatcg gtgatgacga agggcgcagt 1741 ttcgtcgggc tacgcaccgt cctgagattt cgaggccgct tcggcggctc cgtctcgtcc 1801 ctctaatcta taggataccc tatgattgaa accctatcgc gcgatttgca cgatatcgtc 1861 tctgcactct gcagtgacgt cgcctctcca cgctctctgt cagttgagat actgatgaga 1921 tacggggagt gggatcaact tgcgaacctt cgcatcgatc ccttacacta ctcagatccc 1981 tcttcactat ggggtgatac cctagtgact gagattctgc gcaagatgtc tgacctcccc 2041 accactttcg accgcaaggc cgttagtgag gaggccttct tatcttgtga aatgcagtgt 2101 tttagtagca accgccgact tgaaaggctt ctgttcccgg gagatcatat tttctcggcc 2161 ggagacctga tggctcgttc aatatttgag cgagctagaa acctggtcgg cactgtcctt 2221 gggccatttc ctaccaccct cctggatggt aagttcggcc ctggtgctac gtttggcgat 2281 aagggtggtc ggtcgaccat tcctgacaag atgtcatcag aacctacttt gactccatct 2341 gcttggacct ccttgtcttc ctggagatcc acggcatggg ctcgcgcctg tgccgaagat 2401 ggtaggttgc cgcaggttgt tgaggggaac cgcttcacaa cggttcctaa agactgtact 2461 aaggaccgcg gcatcgccgt ggaacctagt attaatgtct tctatcagct ttccgtagga 2521 aagttgattc gctcacgcct tcgccgttta ggtatccacc tagacgaagg acaagatatt 2581 cacaggcgtc ttgcctgtga ggcctctgac gatggccatc ttgctacctt agacctttca 2641 aatgcaagcg acaccatttg caagaacctg gtcgagttct tgcttccgcc ctcttggttt 2701 tccgtcctta acgatcttcg atcgccaaag acgttcttta aggggaaata tcatttcctc 2761 gaaaagttct cctcgatggg taatggtttc acctttgagc ttgagacggt gatctttcac 2821 tgcctcactg tggcttgttg tgagttgagg gtctcggacc ctttcgtctc ctgttatggg 2881 gacgatctca tctttcctac agagtgctca gaggatgtga tgtcgtttat gaagttggca 2941 ggattcacgg tgaatactcg taagagtttc accactggat acttccgcga gagctgtgga 3001 ggagactttt ttaagggtgt ccccgttagg ggtcactacc tgaaagagtc cccttccact 3061 ccttctcact tcatttctct ggctaacggg ctgcgtcggt ctgctactga agaccgattc 3121 tccactgttt atcgtgcgtg gcgtaagtgt ctggacaggt tacctgttca gatacgatct 3181 tgccgggggc ctctggccct cggtgatctc gtcatacacg actcagagga tcgatggaat 3241 aaaatccatc ggaacagcat caggtacatc cgcgtttggc gaccttcacg ctttcgaaag 3301 attgcgtggg atcgctttaa gccgagtgta acccttgcgt ccgccctcta tggcgtagat 3361 tcaggggggc cttccgggat ccgaataaat ggatcacgtt gtgctccctg gtcatcatac 3421 ggggtttccc cgcgtgataa cgttctaggc cataagttgg gctgggtggc gtactcataa 3481 tacgctcagg acgtttcgtc ctgtctttcc tgtctaatca acaggtggta tgaggggtaa 3541 ttccctcttt tggaaaaagt gc //