LOCUS BK013533 4280 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.1_3 genomic sequence. ACCESSION BK013533 VERSION BK013533.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.1_3 ORGANISM ssRNA phage Gerhypos.1_3 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Tehnicivirus; Tehnicivirus edaphocola. REFERENCE 1 (bases 1 to 4280) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4280) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-4280 MN033558.1 1-4280 FEATURES Location/Qualifiers source 1..4280 /organism="ssRNA phage Gerhypos.1_3" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786212" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Tehnicivirus; Tehnicivirus Gerhypos.1_3" gene 46..1536 /gene="Gerhypos.1_3_1" CDS 46..1536 /gene="Gerhypos.1_3_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50468.1" /translation="MLKTFERIVPSSLGPISTTVTYWPPPKPNNLEAPSATHTYTLPG FTVRYDKLLTDNEGDHNQWKPCQHYKRWTDPSSVKPPYGLVWYSKSFSDVGKYISNVP TEPLLLTQGSQFNGTFGPWGSHTNGLPPFMVTDIGDGFIPKPVGLDVLVDASLKKMLP DIKAELSLVNSVIELKDFESLPTTLTRLKSLIEDVLPLFTVNTAKRLIRLSRGMRKLR GTFSSDLGATLRELVQGTADGYLQQEFNVLPLLSDISGVFTALSRTERAINDLIVRRG KLQSKHYQYVYFDKVYTADPLIAGSNALSTGIFAGTTTVPGWISVYKKHGHAFKMTRW VEVNSPAEFHAQVEYSYYFTQFQLEHAQVLGLLDALGVNLNPTIIWNAIPWSFVVDWV LGVNRWLNGRKTLNMEPVVNIKRYLWSHRHTRTTRIYAESVNGSELPWPRVYTWLPDM YEVAYRRDVGIPYTNSFLTSELSNKEITLGVALAVTRRRRSNTRVR" gene 1801..2025 /gene="Gerhypos.1_3_3" CDS 1801..2025 /gene="Gerhypos.1_3_3" /codon_start=1 /transl_except=(pos:1801..1803,aa:Met) /product="coat protein" /protein_id="DAD50469.1" /translation="MRFERTAGGLVDTTKTEKTSCYLVLDYPIGNITAVEAGEVLANL LSFVATTGAATTVLFDGTGNGAVALLSGGL" gene 2363..>4280 /gene="Gerhypos.1_3_5" CDS 2363..>4280 /gene="Gerhypos.1_3_5" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50470.1" /translation="MVINKSLDELELIATLLCDAHASFRAVFNTRALNLTLRKVKNRA RSEGLGFLTKTLPRLGKHLDQVLAGMAKLNPPEYGFKTIPGTKLPRFLGELFSLVFHP DGSVLQQPDAHCVKHIRLVLYSYSKYELPYSDEQEQKVLSAFVNAEDDLRSMSSWLAT LHSRVNNSYNNRRKAPSLVQDLIKDPSDSSLDFRTCVARESRILLAKLFSMYDPTDIV PRHGPGVVATKQRLSEKFRWTNVSSRITEVYPLDAYFCASPGHVCDTYDTFSRITDTS HPAQVLLVPKDSRGPRLISCEPVDFQWIQQGLRETIYHLVETHELTKFNVFFTDQGPN QRGALLGSSTKRYATLDLKEASDRVHLDLVRLLFPEHVFRALAACRSSSTVLPDGKIQ NLEKFAPMGSALCFPIMALTIWALLTATAPDADTRESILVYGDDVIVPTAFAESAMTT LELFGLKINHSKSCTQGSFRESCGVDAFNGIDVTPVRFRTVWSESPRPDVYTSWIAYA NQLWDRQCYTAYEYIVARLEAIYGPIPGEDMHLACPSLRCASATKRDFKSRPNMHLQK MQYKVRVVKSPSVHQPIDGWSMLLRFFTEGHKAKPSSLQNKVEGRFSHLMEEPPFSVS KYTKRHTSMLVWRWR" ORIGIN 1 ccgtaaggcg ctccacgttg aactacggtt cggcactccg actttatgtt aaagacgttc 61 gaaagaattg taccatctag tctcggacct attagtacga ctgtgaccta ttggccaccg 121 ccgaaaccta ataatctcga agcgccatca gcaacgcata cttatacatt gcccggtttt 181 accgtgcgat atgataagtt gctaactgat aacgaaggag atcacaatca atggaaaccg 241 tgccagcatt ataaacgctg gaccgatccg tcgtctgtga agcctcctta cgggctggta 301 tggtattcga aatccttctc cgatgtgggg aagtatattt cgaatgtacc gactgaaccc 361 ttgctattaa cacaaggcag tcaattcaat ggaacgtttg gaccttgggg aagccacact 421 aatgggcttc ctccatttat ggtcacagac ataggcgatg ggtttatacc caagcctgtg 481 ggtcttgatg ttctggttga tgcatcctta aaaaagatgc ttccagatat caaggccgag 541 ctctcgcttg ttaactctgt gatagagtta aaagactttg agtctctgcc gacgacactc 601 acgaggttaa agtccctaat tgaagacgtg cttcctcttt tcaccgttaa tacggcgaag 661 aggttaatac gcttgtctcg gggaatgcgt aaactaagag ggacattttc gtccgatctt 721 ggtgctacgc ttcgtgagtt ggtccaagga actgcagatg gttatctcca acaggagttt 781 aacgtactgc cgctcctctc agacattagc ggtgtattca ccgctctgtc ccgtactgaa 841 agggcaataa atgacctgat agtacggcgg ggcaaacttc agagtaaaca ttatcaatat 901 gtttactttg ataaagtcta cacagcagat cctttgatcg ctggctcaaa tgctctgtct 961 acgggtatct ttgctggtac tacaacagta cctggctgga tatccgttta caagaagcat 1021 ggccatgcgt tcaaaatgac gcgttgggta gaagttaatt cgcccgctga gttccatgct 1081 caggttgagt atagttatta ctttactcaa ttccaacttg agcatgctca agtgcttggc 1141 ttactagatg ctctaggggt taatcttaac cccacgatta tctggaatgc cattccttgg 1201 agttttgttg tcgattgggt cctcggtgtg aaccgatggc tcaatggtcg caaaacactt 1261 aacatggaac ccgtggttaa cataaaacgc tacctgtgga gtcaccgaca cacgcgcact 1321 actcgcattt acgccgaaag cgtgaatggg agtgaattgc cgtggccgcg tgtctacaca 1381 tggttgccgg atatgtacga agtggcttat cgccgcgacg taggaattcc gtatacaaac 1441 tcgtttctga cgagtgagtt atccaataaa gagataactc tgggcgtggc cctcgcagtt 1501 acgcgaagga gacgttcgaa tacccgcgtt aggtaaacaa cataacgcaa cttaggtttg 1561 caacctaggt tgagccttgt gctcaatcgg acgaaagtcc taataagcat gttatcaaac 1621 acgttaaata cgaacgaaat caagaatgcc gccggcgcag aacgggaatt tacccgcctg 1681 tcaaccgtcg gtcgcagcac agagttcggc ctcattactg aggcccctgc ctatcctcat 1741 agattgaaga tctctcacca ggaaactggt tcgggaactt ctctccggag gcgctcaatt 1801 gtgcgttttg aacgcacagc tggcgggctt gtcgatacca ccaaaaccga gaaaacatcc 1861 tgctacctgg tccttgatta tcccattggg aatatcacgg ccgtggaagc tggagaagtt 1921 ctcgcgaacc ttttgtcttt cgtcgccaca actggcgccg cgacaacggt tctgttcgat 1981 ggtactggca acggtgctgt agcactcttg tcgggtggtc tttaagacca tctaactcga 2041 gatacacaat atcaagtatg atactgctgt atatgctatt cttgggcgcc cacatcgctg 2101 cgggcgcctt agtgtacgcc agtttaacga ttactcgtta atctgttctt gtatacgaat 2161 tgccgttatc ttgtcagtga ccttttgaga gtcattaacg ttcattatct tcatccagaa 2221 gagaacgtcg ttaatgagct ttctttggcc tgccgagata tcagcagatt taagtaatgc 2281 ttccaattct ttggttgtca taacttagat tcctttcgtt cggaatcgca gagacgtgtg 2341 catgctctag gagatatacc atatggttat caataagagc ctagatgaat tagaactcat 2401 cgctacactg ctctgcgacg ctcacgcgtc gtttcgagcc gtgttcaaca cacgagccct 2461 aaacttaact ttgagaaaag ttaagaatag agcacgctcc gaaggactcg gttttcttac 2521 gaaaacctta ccccgtcttg gcaagcacct agatcaggta cttgcaggaa tggctaaatt 2581 gaaccctcct gagtatggct ttaaaaccat acccgggact aagcttccga gatttctcgg 2641 tgagcttttc agtttagtct tccatccaga cggtagtgtc cttcaacaac ccgacgcaca 2701 ttgcgtcaag cacatacggt tagttttata ctcttattca aagtatgaac tcccgtattc 2761 tgatgaacaa gaacagaagg ttctctctgc gtttgttaac gcggaagatg acctccggtc 2821 tatgtcatcc tggcttgcta ctttgcatag ccgggttaac aatagctaca acaacagacg 2881 aaaagctcca agtttggtcc aagatcttat caaagatcct tcggattcta gcctggattt 2941 tcgcacttgt gtagctcgcg agtcgagaat acttcttgcg aagctgttct cgatgtacga 3001 ccctactgac attgtccccc gtcacggccc tggagtcgtt gccacaaagc aacgtctctc 3061 agagaagttt cgatggacta atgtttcaag tcggatcaca gaagtttatc cacttgatgc 3121 gtatttctgc gcatcgcctg gacatgtctg tgatacttat gatacgtttt cacgtatcac 3181 tgatacgagt catcccgcac aagttttgct tgtgccgaaa gactctcgtg gtccacgcct 3241 tatctcttgc gaacccgttg attttcaatg gattcaacaa ggattaaggg agactatata 3301 ccacctggtg gagacacatg aactaactaa gttcaatgtg ttcttcacag accaaggacc 3361 gaatcaaaga ggagccttat taggttcttc gacgaaacgg tacgctaccc tcgacctcaa 3421 agaggcctcg gatcgcgttc accttgatct agttcgccta ctgtttccag aacacgtttt 3481 tcgtgctctg gctgcatgta gaagttcctc aacggtgttg cctgacggta agatacaaaa 3541 cctagaaaag ttcgccccaa tgggttcagc attatgcttt cccattatgg cgcttactat 3601 ctgggccttg ctaacagcaa cagcacctga cgcagatact cgcgagagta tccttgtata 3661 tggtgatgat gttattgttc caaccgcttt tgcggagagc gcaatgacta cactcgaact 3721 gtttgggttg aaaatcaacc acagtaagag ctgtacccaa ggatccttta gggaatcctg 3781 tggcgtagat gctttcaatg gcatcgacgt tacgccggtc cgtttcagga ctgtctggag 3841 tgaatcaccc cgccctgatg tctataccag ttggatcgct tatgcgaacc aactttggga 3901 taggcaatgc tacacggcct acgaatatat cgtagcacgg ttagaagcca tttatggccc 3961 cataccagga gaagacatgc atttagcatg tccatctctc cgttgcgcat cggcgacaaa 4021 gcgggacttc aaaagccgtc cgaatatgca ccttcaaaag atgcagtata aggttcgagt 4081 tgtgaagtct ccgtctgtac atcagccgat tgatggatgg tctatgcttc ttcggttttt 4141 taccgaagga cataaggcca aaccatcatc cctacagaac aaagtcgaag gcaggttctc 4201 ccatttgatg gaagagccgc ctttctctgt cagtaagtat acgaagcgtc atacgagcat 4261 gctcgtgtgg cgttggcgat //