LOCUS BK013879 3994 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.1_39 genomic sequence. ACCESSION BK013879 VERSION BK013879.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.1_39 ORGANISM ssRNA phage Gerhypos.1_39 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus pedovivens. REFERENCE 1 (bases 1 to 3994) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3994) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN035581 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3994 /organism="ssRNA phage Gerhypos.1_39" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786222" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Gerhypos.1_39" gene 89..1387 /gene="Gerhypos.1_39_1" CDS 89..1387 /gene="Gerhypos.1_39_1" /codon_start=1 /transl_except=(pos:89..91,aa:Met) /product="maturation protein" /protein_id="DAD51642.1" /translation="MTDRTTVRSRSFPFKMGKGHVFAKSWYWPDGYNTARLDIDKDVR ITGPAGSQVTASEGHPFHGRNAFGYDVGGPFDTTKREIQIVGSYNNSLRFFGRDVDSG YEQTFKGPIVPIKPANLSYPTASSSSDIALAQKGATAVARCSPSNPIANLSTFLGELI KDGIPAIPGARTWEAKALAAKLAGEEFLNVVFGWKPLMGDIQSTAKAVRHANTVLKQF ERDAGKAVRRRYTFDTIESRGNATLLFSGNAPFIGEDSNGTLWNMSAILGSGQVWKVS ENINRTWFSGAFTYHLPTGYNSRKALDRAALEANRVFGLELTPEVLWNLAPWSWALDW VSNAGDVLKNISQHIQYGQVLRYGYIMENIISRDIYSYLQKTPPVHFAGNVSVPMLIL ETNTKKRRGANPFGFGLTWSGLTATQQAIAAALGLTRSRS" gene 1481..1843 /gene="Gerhypos.1_39_2" CDS 1481..1843 /gene="Gerhypos.1_39_2" /codon_start=1 /product="coat protein" /protein_id="DAD51643.1" /translation="MSLTDPQSITIAGTTTPLPRVATGKNLSEYLSADGLIRLGASHA YGRRTRRVLRIDHSKITADPFIPTQNAKVSMSCYMVFDIPPAGYTNTQQLDVYTGFKT LFSATSDAAITKLLGGES" gene 2030..3904 /gene="Gerhypos.1_39_3" CDS 2030..3904 /gene="Gerhypos.1_39_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD51644.1" /translation="MKSPMLLWKRIAEESAILCCTCATRDVNYVTRRYEHEGMSFLTI SLPSFGKDFEKSLDLRRADRNLYQGFPWQAGLPRFLGGFLDLVFDRRSGVLLDDPSID AIISIRQLTLMYGKILLPCSDAREKKAMDEYVECERDVRVSDSKISNQQWFDFSRIGN LLFRDAFQRVDREVYDNELIPKHGPGATADRLRGNAKFSQLTWPRRLETLFPFGEFSL PNWKYFDVLSKVDILEPRDEIPARVISVPKTLKTPRIIAIEPTAMQYSQQALARSILE SLRDIDYLDSMLGFRDQTPNQRMAQIGSREGSLATLDLSEASDRVSNEHVRHLVSHFP YLHAGLDATRSRKAHVNGHGVLRLAKYASMGSALCFPVEAMVFLTMIFVGIERALNTS LSRKLIYQFMGLVRVYGDDIIVPVECVPHVIDSLESFGIRVNTGKSFWNGKFRESCGK EYYDGHDVSIVRVRRELPSSRERVAEVISLVSLRNQLYEHGYWRTCEALDESIRKLIK HFPVVLPTSPVVGRHSFLGYSVERMSDDTHSPLVRGYVVSAQPPEDYLDGYGALLKCL LMLEQKYGSKPLSRDATELSEFPTIDEVGGLPAVNAEHLERAGRPQSVALKLRWESPF " ORIGIN 1 ccacaaaggg gcgccacacg cagtgcaaca ttcaccattc aagcaacgac aacagtcgtt 61 gcttgaaaag aaccagagga gctggatcgt gactgaccga accactgtac ggagtcgttc 121 ctttccattt aaaatgggta agggtcatgt cttcgccaaa tcgtggtatt ggcccgatgg 181 gtacaatacc gcgaggctgg acattgacaa agacgttcgt attactggtc cggccggctc 241 gcaggtaact gcgagtgaag gacatccttt ccatgggcgt aatgcctttg gatatgatgt 301 aggtgggccg ttcgacacta cgaagcgaga gatccaaatt gttggttctt acaacaacag 361 tttgagattt ttcggtcgtg atgttgatag tgggtacgag cagaccttta agggtcctat 421 cgttcccatt aaaccggcaa acctttccta cccgactgct tcgagcagta gtgatattgc 481 tcttgcgcag aagggggcca cagctgtggc acggtgttcg ccatcgaatc cgattgcgaa 541 tctatccacc ttcctcggcg aactcatcaa ggatggcatt cctgccattc ctggtgctcg 601 tacgtgggag gcaaaagctc ttgccgcaaa acttgcgggt gaagagtttt tgaacgtagt 661 gtttggatgg aaaccgctta tgggcgacat ccagtcgact gcaaaagcag ttcgacacgc 721 caatactgtt ttaaaacagt ttgagcggga tgccggcaaa gcggtacgcc gtaggtatac 781 cttcgacacg atcgagagtc gcggaaatgc cacattgctc ttttcgggta atgccccatt 841 tattggggaa gactcgaacg gaacgttgtg gaatatgtcc gcgatcctag gtagcgggca 901 agtttggaag gtgtctgaaa acatcaaccg aacttggttt tccggagcat tcacgtatca 961 cttgcctacc ggctataata gtcggaaagc tcttgatcgt gcagccttgg aggcgaatcg 1021 agtctttgga ctcgaattaa cccctgaggt gctctggaat ctcgctccct ggagttgggc 1081 cctcgactgg gtgagtaacg ctggtgatgt tcttaagaac atctcccagc acatccagta 1141 tggtcaggta ttgcgatacg gatatatcat ggagaatata atctccagag atatatattc 1201 gtatcttcag aagacgccac cagttcattt tgctggcaac gtctctgttc ccatgcttat 1261 cttggaaaca aataccaaga aacggcgtgg ggcaaacccc tttggtttcg gtctgacatg 1321 gagtggctta actgccaccc aacaggccat agccgctgct ctaggcttaa cccggagcag 1381 aagctaatgg atgttccatt agcgtaaacc accaaccctg gtacctctag ttaggggtcc 1441 ggggaggtct cattaagaga ccagttagga gtagtgcctt ttgtccctga ccgatccgca 1501 atccattacc attgcaggta caacgacacc tcttccccgt gttgccacgg gtaagaattt 1561 gtcggagtat ctgtcggcag atggattgat cagacttggc gcgagccacg cctacgggcg 1621 tcgtacgcgt cgagtccttc ggattgacca ttcgaagatc actgctgatc cgttcattcc 1681 gacccagaat gccaaggttt ccatgagttg ttacatggtc tttgacattc ctccggccgg 1741 atatacgaac actcagcagt tggacgttta cacgggcttt aaaaccctgt tctcggccac 1801 ttcggatgca gcaatcacca aacttctggg cggtgagagc tgagataaac tctgacgcta 1861 catataaaat tgtagctgtc atcaccggct ttgcctatgt tacgacaaag gcggtgttga 1921 tttatctgtt ggctaaaggc aatcaggtct atataagtcc tgagaacttt tagctggttg 1981 agggcttcag gctaaggatg gattaccccc tatttcacta ggaggaacca tgaaaagccc 2041 gatgctactc tggaaacgga tagcggaaga gtctgctatc ctgtgctgca catgcgccac 2101 gcgtgacgtg aactacgtca cgcggcggta cgaacatgag gggatgtcgt ttttaacgat 2161 atccctgcca tcctttggaa aggacttcga aaaaagtctt gaccttagga gggcggatcg 2221 caacctgtat cagggttttc cctggcaggc aggtctcccc cgtttcctcg gaggtttcct 2281 cgatcttgtg ttcgaccgac gtagtggtgt gttactcgat gatccgtcca tcgatgcaat 2341 aatttccatt cgtcaactaa cgttgatgta tggaaaaatt cttcttccgt gcagcgatgc 2401 tcgggagaag aaagcgatgg atgaatatgt cgagtgtgag agggatgtca gagtttctga 2461 ttccaagatc tcgaaccagc aatggttcga tttcagtaga atcggaaatc ttctttttcg 2521 ggatgctttt cagcgtgtgg accgtgaggt ctacgacaat gaactcattc cgaagcatgg 2581 cccaggtgct acagctgata ggcttcgtgg aaacgcgaag ttctctcagc taacctggcc 2641 acgccggctg gaaacgttgt tccctttcgg ggaattttcg ttgcccaact ggaagtactt 2701 tgacgtattg tcaaaggttg acatcctcga acctagggac gagatacccg caagggttat 2761 ctctgtcccc aagacgctaa agacacctag gataatcgca attgagccca cggctatgca 2821 atatagccag caagctcttg cgcgatcgat ccttgaatcg cttcgagata tagactatct 2881 tgactcgatg ctcggcttcc gcgaccaaac gcctaaccag cgtatggcgc agataggctc 2941 ccgtgagggt agcctagcca cgctcgatct gagcgaggct tccgaccgtg tctctaatga 3001 gcatgtacgg caccttgtgt ctcatttccc gtatttgcat gcgggtcttg atgccacaag 3061 gagccggaag gctcatgtaa atggccatgg cgtattacgt ctggccaaat acgcgtcgat 3121 gggttcagcg ctgtgctttc ccgtggaagc catggtcttt ttgaccatga tcttcgtggg 3181 gattgaacga gcgcttaaca catcgctttc ccgtaaactg atttatcagt ttatgggctt 3241 ggtgcgagtc tacggggacg atatcatcgt tcctgtagaa tgtgtacctc acgtgattga 3301 ttcacttgaa tccttcggga ttcgagtgaa tacaggcaag tccttttgga acggtaagtt 3361 ccgagagtct tgcgggaagg agtattacga tgggcatgac gttagtatcg tcagagtccg 3421 tcgtgaacta ccttcctcac gtgagcgcgt cgccgaggtt atttcactcg tttctctcag 3481 aaaccagctc tatgagcatg gttactggag gacttgtgaa gcgttggatg agtcgattcg 3541 gaaattgata aaacattttc cggtcgtctt gccaacgtcc ccggtagtag gtcgtcattc 3601 tttcctcggt tattccgtgg agagaatgag tgatgatacg catagccctt tggttagggg 3661 ctatgtagtc agcgcccaac cacccgaaga ttatttggat ggttacggtg ccctacttaa 3721 gtgcctcctc atgttggagc agaaatacgg aagtaagcct ctgagcagag atgctacaga 3781 gctttccgaa tttccaacca tcgatgaggt tggcggtttg ccagccgtca atgctgagca 3841 cttagaacgc gcagggcgtc ctcagtccgt cgcactgaag ctgaggtggg agtcaccctt 3901 ttgatagggt gacaccgggg cgattaaatt cgcctcgggg agattaggtc ctcttcataa 3961 gagggtgtgg cgctttgcca cacgtatctc ctac //