LOCUS BK014009 3992 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.1_40 genomic sequence. ACCESSION BK014009 VERSION BK014009.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.1_40 ORGANISM ssRNA phage Gerhypos.1_40 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Skrubnovirus; Skrubnovirus agrihabitans. REFERENCE 1 (bases 1 to 3992) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3992) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034981 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3992 /organism="ssRNA phage Gerhypos.1_40" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786224" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; NA; NA; Skrubnovirus; Skrubnovirus Gerhypos.1_40" gene 70..1422 /gene="Gerhypos.1_40_1" CDS 70..1422 /gene="Gerhypos.1_40_1" /codon_start=1 /product="maturation protein" /protein_id="DAD52122.1" /translation="MRYRSQVHTQARNGPCIEQNLKTGGIQSTRAFALNIVDIESLMW DDATGGSKVTKPCTHLSYVVDDLMTNHVCYHSDSLANIPNPMYRYDNADFYYSLVNQW RPSSVLSNAEAYIGVTNSSSDDLGNCVFNAYNQFVNGVRALDASVSIAESGETPRLFA LWQRRLAAPSNIVNGFLSYSFGWKPLINDLRAVCRELRSFPVTVRKRLKAIGDGMVTR HYKFRLSATVNDVYVEHAKKNTSSPYWWSPVLDYSKSVNKSRVVVVTIRAKVKPKLTG DGQAILDKLGALGLIPSLATVWSVTRLSFVVDWFYNIGGAIENLQGSLTHDISDVSVC ISDARDREIVVRCSGPGGASSTTVGTVVQRYYKRSQTSVPLLPSIRYPNKLMPYVLLG LLTLTQTRGGKVLLSLADKSGVSKRVSAKITAAIDRLSPRKRKDLESAYKRLTLHGGR " gene 1560..1928 /gene="Gerhypos.1_40_2" CDS 1560..1928 /gene="Gerhypos.1_40_2" /codon_start=1 /product="coat protein" /protein_id="DAD52123.1" /translation="MSITLNSKVFAKTSNVGPTSILLTTRSRGITLPDTILLDHRTKK NPVEAGSVNAIHKISIQRTFINADGVVKVGGVALTFDIPDDMDQTNIDAMYADMKDYQ SSAMTERTANTAALLSGVIE" gene 2077..3984 /gene="Gerhypos.1_40_3" CDS 2077..3984 /gene="Gerhypos.1_40_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52124.1" /translation="MSDVVMKIQTIYDRLHRDVCSKYGENPPLQVSRAPVYEALWKKL LATIEEMGAEKVSSVLIIDAKASLISSGPADNTVDLLVGLESGALLSLIQVPQELLAL VRTFLAGGLKPSVLQDIRQICLFTYKIKSHEVTKTQRDSAIEGFRSRNAACCSITPSS LRLKAQGKGLIPDMLRIARLLSNVIVANIDWREVKPSHGPGAVSDAKRSGSSKWRAID GKVCRVTDKFYPMAEFFTPSPSWFNHQEATFVDPICKLAIVPKDRRGPRVICTQPSGL MWIQQGQRRVLERTIETSRILSTNRGLASEGIAGSIKFDRHENNGWLALESSRTREFA TVDLKDASDLVSWGLVQFLFTKGTNQFLAASRATHVKIDGVQEKLHMYAPMGSAMCFP IESLVFWVIAAAATYVSRGVTYEEIVKSGSATKWVENNKTEVFVFGDDILVRREACTD VCECLKAVGLVPNMSKTFVEGFFREACGVDAFHGEQLVIARLQNIALTSMSDAYAIID ASKRLRRLGMIHTAQYLEEQTEAFLGFRLAAGVFPGGPFWERDWTCDAEGARKALSWN LRRNTEIRFNTDYQYFEAKTVIASPLPTKEPQDGRCRLFRGLTTGVDEHTVDWLNPDN TQYHLGWVRAF" ORIGIN 1 ggcttcttga gaattacgtc catgataata cgcatttcgc gcaaacatgg atagcttctc 61 tataatacga tgcgatatcg atcacaggtt catactcaag ccagaaatgg cccttgtatt 121 gaacagaact tgaagaccgg ggggattcaa tccacccgag cctttgctct caatatagtc 181 gatatcgagt ccctgatgtg ggacgatgca actggtggca gcaaggttac taaaccttgt 241 acacacctgt cgtatgtagt agacgatctg atgacaaacc acgtttgtta tcactcggac 301 agcctagcga atattccgaa tcccatgtat cgttatgata atgcggattt ttactattca 361 cttgtgaatc agtggaggcc ttccagcgtt ctttcgaacg ccgaggctta cattggtgtc 421 acaaatagta gcagtgatga tctgggaaat tgcgtgttta acgcatataa ccagttcgtc 481 aatggagttc gcgcgttgga tgcctctgtg tcgatagccg aatcggggga aaccccccgg 541 ttgtttgcac tgtggcagcg ccgcttagca gcaccttcta acattgtgaa tggctttctt 601 agctattcct ttggttggaa gcccttgata aatgaccttc gggctgtttg tcgagagttg 661 cgaagcttcc cggtaaccgt ccggaaacgt cttaaggcaa ttggcgatgg tatggtgacg 721 cggcattaca aattccgcct ctccgccacc gtcaatgacg tatacgtcga acatgccaag 781 aaaaatacga gctcgccata ttggtggagc ccggttcttg attattcgaa gtcggttaat 841 aagagtcgag tggttgttgt gaccattcgt gccaaggtga aacctaagtt gacgggagat 901 ggccaggcca tcctagataa actaggggcg ctaggtttaa tcccgtcctt ggcaacggtc 961 tggtcagtca cgcggctcag cttcgtggtt gactggttct ataatatagg aggtgcaata 1021 gagaaccttc agggttccct gacacatgac atctcagatg tcagtgtttg catctccgat 1081 gcacgagatc gtgagatcgt agtgcgttgt tcgggaccag gtggtgcttc aagcaccacc 1141 gttggtacgg tagtccagcg ttactataag aggtctcaga cctctgttcc gctcctgcct 1201 agtatccggt atcctaacaa gttaatgcct tatgtcctac tcggactttt aacattaaca 1261 caaactcgtg gcggcaaagt tttgctgtcc cttgctgata agtctggcgt gagcaagcgc 1321 gtaagcgcga agatcactgc tgctattgac cgtttgtccc ctcgaaagag gaaggatctt 1381 gagtcagcct acaagaggct gaccctgcat ggcggaagat agtgggtacc agtataatat 1441 gtctaagatg tattaactta taagtgagtc aatagtggtg gctatcctaa ctacctcgta 1501 ggcgacgact tcgccaaacc caagtgtcct cggtcacaaa ataccgggaa ataaacaaca 1561 tgagtatcac cctcaattcg aaggtgttcg ctaagaccag caacgtagga ccgacttcga 1621 tcctactcac cacgcgctcg cgtggaatta cactgccaga taccatcctt cttgatcata 1681 ggaccaagaa gaacccggtt gaggcgggga gtgttaatgc catccacaag atcagcatcc 1741 agcgcacgtt tattaacgcc gatggagttg tgaaggtggg tggtgtcgca ctgacgttcg 1801 acatcccgga tgacatggat caaacaaata ttgatgccat gtacgccgat atgaaggact 1861 atcagtccag tgccatgacg gagcggacgg ccaatacggc cgcgcttctt tctggcgtta 1921 tcgagtaacc tcggtaattt ctggaacgac gatctacgaa ggggcttaat ctcccccgtt 1981 gtaggttccc ccaggctatg cctggtgtta gagaaaatgc tggctcagtt cagctatagt 2041 tagaaaacaa aatcactaaa ccctgaaagg acttaattgt ccgatgttgt tatgaaaata 2101 caaacgatat atgatcgcct gcatcgtgat gtctgcagca agtacggaga aaatccgcca 2161 ctgcaggttt ctagggcgcc cgtttacgag gcgctatgga agaaactact agccaccatt 2221 gaagaaatgg gagccgagaa agtttcatcg gttctgatta tcgacgcgaa agcgtctttg 2281 atctcctcgg ggcccgcgga taataccgta gacctcttag ttggattaga gtcgggggca 2341 cttctgtccc tgattcaagt cccacaggag ctattagctc tggtacgaac attcctggct 2401 ggtggcctta agccctcagt tcttcaggat atacgccaga tatgtttatt cacgtataag 2461 attaagtcac atgaagttac gaaaacgcaa agggacagcg caattgaagg ctttcgcagc 2521 agaaatgctg cgtgctgcag tatcactcct agtagcctac gccttaaggc gcaggggaaa 2581 ggattgatac cagatatgtt gcgtattgcc cgcttactga gtaacgtcat tgtcgcgaat 2641 atcgactggc gtgaggttaa accctcacac ggtcctggcg cggtcagtga tgcgaaacgt 2701 agtgggtcga gcaagtggag agccatcgat ggaaaggttt gtcgggtaac cgacaagttt 2761 tatcctatgg ctgagttctt cactccctca ccctcctggt ttaatcacca ggaggccacg 2821 tttgtagatc cgatctgcaa gctggctatc gtccccaaag accggcgcgg ccctcgcgta 2881 atctgcacac agccttctgg gctgatgtgg attcaacagg gtcaacgtcg agtgttggaa 2941 cgaacgatag agacctctcg catacttagt accaaccggg gtttagcctc ggaaggtata 3001 gctggatcaa ttaagtttga ccggcatgag aataatgggt ggttagcact cgagtcctca 3061 cggacaagag agttcgccac cgtcgatctc aaagatgcta gtgacctagt tagttgggga 3121 ttggttcagt tccttttcac aaaggggaca aatcagttct tggcggcgtc tagggccact 3181 cacgtcaaga ttgatggggt tcaagagaag ttgcacatgt acgcccctat ggggagtgct 3241 atgtgttttc cgatcgagag ccttgtcttt tgggttattg ccgctgcggc aacctatgtg 3301 agtcgaggcg ttacatacga agaaatcgtc aagtcgggat cggccacaaa gtgggtcgag 3361 aacaataaga cggaagtatt cgtatttggt gatgacatcc ttgtgcgccg tgaggcgtgt 3421 acggatgtct gcgaatgtct caaagctgtt gggctagtgc ccaacatgag taagacgttt 3481 gtggagggct tctttcggga agcctgtggc gttgacgcgt tccatggcga gcagctggtt 3541 atagctcgcc tacagaacat cgccctcacc agtatgtcgg atgcctatgc gataatcgat 3601 gcctccaaga ggcttcgacg cttgggtatg atccataccg cacagtacct agaggaacaa 3661 acggaggcct ttcttggctt ccggttggcc gccggggtct tccccggcgg tcctttttgg 3721 gaacgcgatt ggacctgcga tgcagagggt gctaggaaag cactctcatg gaatctgcga 3781 aggaatactg aaatccgttt caatacggac taccagtact tcgaagcaaa aaccgtaatc 3841 gcaagcccgc tccccaccaa ggagccacaa gacggcaggt gccgtctgtt tcgtgggtta 3901 accacgggtg tagatgaaca taccgttgac tggttgaatc cagacaacac gcagtaccat 3961 ctggggtggg ttagggcctt ttaagaccta ac //