LOCUS BK014041 3830 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.1_45 genomic sequence. ACCESSION BK014041 VERSION BK014041.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.1_45 ORGANISM ssRNA phage Gerhypos.1_45 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Pirifovirus; Pirifovirus chorovicinum. REFERENCE 1 (bases 1 to 3830) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3830) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY ANNOTATION DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN032722 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3830 /organism="ssRNA phage Gerhypos.1_45" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786229" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Pirifovirus; Pirifovirus Gerhypos.1_45" gene 72..1301 /gene="Gerhypos.1_45_1" CDS 72..1301 /gene="Gerhypos.1_45_1" /codon_start=1 /product="maturation protein" /protein_id="DAD52229.1" /translation="MTYIRNGTWRSRSYDLSTVVNLAQNGDYTLGGVLVGALSGGASF ATRVNKGTISYTVHSPQSFGKSNYCKHVTERVMYPDVGTIKILHDTAAAPTREYRFND YPSSRIKPAYDSAKAAAITAFGVSIDGTVLSGSAQSLINDGYSKMKPDLTTVSVPNFI LDLGQLSSLVDLWSSRRSVVKNVAGGWLNYSFGWRPTISDVTNMLSAVTGVQRRLALW NASVGKVISRQVTVYTNSIFKSGSLTNTPTALGTTKWWGALDQRVTAHVAYRPSAIRD VDDISTKLLALVDSLGFELNPAIIWDKLPFSFVVDWFIGIGDYLARIKLDTLELPILL VDSYLQHKQTMTVATTTRYAADATYQGWDLPGATGAYTYFERWPILPRANDLYSLGWK IPNLRQWSYGLSLSLTR" gene 1395..1781 /gene="Gerhypos.1_45_2" CDS 1395..1781 /gene="Gerhypos.1_45_2" /codon_start=1 /product="coat protein" /protein_id="DAD52230.1" /translation="MSLGTSLALSKDSPTDVDTNLSTFDLRAADLNRSEYSVAGLTLP SERKLTVSHDTGKGGEQRHLVRIDDTVVDTALVPATMSVYLVIVRPPNTAVTNALLIE NVNRLVDFAIEGGVNGNITKILNSEV" gene 1884..3731 /gene="Gerhypos.1_45_3" CDS 1884..3731 /gene="Gerhypos.1_45_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD52231.1" /translation="MINIGNLKSLLLLWEYLATNRRYSKYVDKKDLFTFQKRTRAEGI SFLTTKLPSLGKALDRFHATNEWIPPSDFVLDGDKRPIFLGGCLARCFEGDPDAVDCY RQLTLIFYKLEVDYDPEIERSFLEDFKKVDQELPTTFDITDKVLIRARSLVRRVLCNT DPLDSRPCHGSGATACRTSNAEKWHKLRYYPKLDAVFSYPDYFFYSYTHLADQLDKLQ NAEESFPRARVVLVPKDSRGPRVISCEPAEMMYIQQGLMRSLYRTLETHPLTKGRINF TDQSVNQELARIASYDGNMATLDLAEASDRVSLALVQYLFSEPWVEALEASRSEETTL PSGEVLKLNKFAPTGSSCCFPVEAIVFWVIAVASIQIHVEECIQNDISDDTLSGVRLT RNWRYPRYQTDSELPDVFVYGDDIIVDARWARLVMDGLEAYGLKVNRTKSYVSGPFRE SCGGDFYLGTEVTPVRVRKALASSACSQVTDATLCNTFIAKFGYEDARSIVSLIDSLY PLPLPRSLRSLPGCVNSTAASNDVFYQRRWNKDLQRYEHRIPSPYTKSLDIGDIAWCE LLRKELGRDVPNGHSPYENPLRIVEAHMDPGHYAVTHSARMRWVWTWLD" ORIGIN 1 gaggacgacc ttcaggccta tccaaggccc atcgatgtta aaaggcatcg aattcactac 61 aaggagcatc tatgacatac attagaaatg gtacgtggag gagtaggtct tacgacctct 121 ctactgtcgt caacctggcg cagaacgggg attataccct gggcggcgtt ttggttggcg 181 ctttgtctgg cggggctagc tttgctaccc gcgtcaacaa aggtaccata tcttatacag 241 tacactctcc ccaatctttt gggaagagta actactgtaa gcatgtcacg gaaagggtta 301 tgtatccgga cgtggggact ataaaaatcc ttcacgatac ggctgcagct cctactcgag 361 aatatcgttt taacgattat ccttcgagta ggattaaacc cgcttacgac tcggctaaag 421 cagcggccat tacggcattt ggcgtcagta ttgacggcac agtgctttca ggctctgctc 481 agtcgctcat caatgatgga tattcaaaga tgaaaccaga tttgaccact gttagtgtac 541 ccaatttcat acttgatctt gggcaactta gcagtttggt tgacctctgg agtagtcgtc 601 gtagtgttgt taagaacgtt gccggtggct ggctgaatta cagttttggc tggcgtccaa 661 ctatttcgga cgtcaccaat atgttatcag ctgttaccgg ggtccaacgt cgcttagcat 721 tgtggaacgc atccgttggg aaagtcattt ctcggcaggt gaccgtatac acaaattcga 781 ttttcaagag tggctcatta accaatacac ctacagcact tggtacaact aagtggtggg 841 gtgcgttgga tcaacgagtc accgcccatg ttgcttatcg tccgtccgct atacgggatg 901 tcgacgatat atcaacaaag ctgttagctc ttgttgacag cttggggttt gagttaaatc 961 cggcgattat ctgggataaa cttccattta gcttcgttgt cgattggttt atcggcatcg 1021 gggactattt ggcaagaatt aaactagaca cgctagaatt gcctatcttg ttggttgatt 1081 cgtatctcca acataaacag acgatgacgg tagctaccac caccaggtac gctgcagatg 1141 caacgtacca aggatgggac ctaccggggg cgaccggcgc ttatacttat tttgagcgct 1201 ggccgatcct gccgagggct aatgatttat atagcctcgg ctggaaaatc ccgaatttaa 1261 ggcagtggtc ttatggcctc tccttaagtt taactcgatg atgttaactc atctatcaac 1321 cttagagtaa tctaaggtaa accttgtgca acttttagca cataacaatc ccctttactg 1381 gggaggagca tgctatgtct ctaggaacga gtttggccct ttcgaaagat tctccgactg 1441 acgttgatac gaacttaagt acgttcgatc ttcgcgcagc ggatctcaat cgttcagaat 1501 actccgtcgc agggcttacc ctgccaagcg agaggaaact gactgtgtct cacgacacag 1561 gcaagggagg tgaacaacgg cacttggttc gtatcgacga tactgttgtt gatactgccc 1621 tggtgccggc cacgatgtca gtttatctgg tcatcgtgcg tccacccaac acggccgtga 1681 ctaacgctct cttaatcgag aacgttaacc gccttgttga cttcgccatc gaaggcgggg 1741 tcaatgggaa catcacgaaa attctgaata gcgaagttta gtagctacaa agaattgttt 1801 accgcaacaa gcgcctttta atacgctgtg cggcgtgtct aagctcatac ctagcgccat 1861 gggatgcttc tcggagatcg tctatgatta acataggtaa tctgaaaagc ctactcctgt 1921 tatgggagta cctggcgact aatcggcgct actcgaaata cgttgataag aaggatcttt 1981 ttaccttcca aaaacgtact agagcagagg ggatttcctt cttaacgacc aagttgcctt 2041 ctttagggaa ggccttggac agattccacg ctactaacga gtggatacct ccgtctgact 2101 tcgtgttaga cggggataaa cgacccattt ttctgggtgg ttgtctggct cgttgcttcg 2161 aaggagatcc agatgctgta gattgttatc gtcaactgac gttaattttc tacaaactgg 2221 aggttgatta tgatccggaa atcgaaagga gctttttgga agacttcaaa aaagtcgacc 2281 aagagcttcc tacgacgttt gacattactg ataaagttct tatcagggct agatctctgg 2341 taaggagggt cttgtgtaat acagaccctc ttgactcgag gccttgccac ggcagcggtg 2401 caaccgcctg ccgtacgtca aatgctgaga aatggcacaa gcttaggtat tatcctaagc 2461 ttgatgctgt tttctcgtat ccagattact tcttctattc ttacactcat ctggctgacc 2521 agctggataa gctacagaat gctgaagaat cctttcctcg ggcacgggtt gtacttgtgc 2581 ctaaggatag tcgaggtccc cgagtgattt catgtgagcc tgctgaaatg atgtatatac 2641 agcaaggcct catgaggtcc ctctatagga ctctcgaaac ccatcctctc accaaaggtc 2701 ggataaattt taccgaccaa agcgtaaatc aggagttggc tcgtattgcc agttacgacg 2761 gcaatatggc tactctcgat ctcgctgaag catcagatcg tgtttcctta gccctagttc 2821 agtatttgtt ctctgaaccg tgggttgagg ctctcgaagc atctcgctcc gaggaaacga 2881 ccttaccttc tggtgaagtt ttgaaactaa acaagtttgc tccaacgggg agctcttgtt 2941 gtttcccagt tgaggctatc gttttttggg taatagccgt tgcatctata cagatacatg 3001 tggaggaatg tattcagaat gatatttctg acgataccct cagtggcgtg cgtttaacac 3061 gtaactggag atatcccaga tatcaaactg attccgaact tccagatgta ttcgtatacg 3121 gcgatgacat cattgttgat gcccgttggg ctcgactcgt gatggatggc ctggaagcct 3181 atggactaaa agtcaatagg accaagtctt acgttagtgg acctttccga gaatcctgcg 3241 gaggcgactt ctatttaggt acagaagtta cccctgttag ggtaaggaaa gcgctggcgt 3301 catcagcgtg tagtcaggtt actgacgcga ctctttgcaa cacttttatt gcaaagtttg 3361 ggtacgagga tgcgcgttcg atcgtttcat tgatcgactc gctttatcct cttcccctgc 3421 caagaagttt gcgtagcctt cccggctgcg tgaattccac ggccgccagt aacgatgtct 3481 tctaccagag gagatggaac aaagatctcc aaaggtatga gcatcgcata ccctctccat 3541 acaccaaatc gttagatatt ggtgatatcg catggtgcga gctcttgaga aaagagctgg 3601 gtcgggatgt gccgaatggc cattctccat atgaaaatcc acttaggata gtggaggccc 3661 atatggatcc tggtcactac gcagttaccc actctgcccg tatgaggtgg gtgtggactt 3721 ggctcgatta gccaaggaac tttggcgttc cccgttctcc taaagaacgg gggtagacga 3781 caaggtgtag ggggggtcct aggcgtgaag cctgggatta aaattgctgg //