LOCUS BK013413 4421 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.1_8 genomic sequence. ACCESSION BK013413 VERSION BK013413.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.1_8 ORGANISM ssRNA phage Gerhypos.1_8 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Weheuvirus; Weheuvirus geovivens. REFERENCE 1 (bases 1 to 4421) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4421) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-4421 MN035551.1 1-4421 FEATURES Location/Qualifiers source 1..4421 /organism="ssRNA phage Gerhypos.1_8" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786239" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Weheuvirus; Weheuvirus Gerhypos.1_8" gene 207..1694 /gene="Gerhypos.1_8_1" CDS 207..1694 /gene="Gerhypos.1_8_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50039.1" /translation="MDKTRYRFRVGRLDGVLPDGSNWNRHVHLGDYYSKLTEYRNGVL TDLGWGLPYSPVDYIPELSVTSVEQTWDELHPRSRSYKTTAFTSYGQESFYSSGGPFL NVKIDLGVPTSGVMNSGTYYSVDGTKKYEGGFMPPNSDFWGSGWASSPLSFTGASNAL LPDVSSYFDRAWSMAKPKLEYANLYTFLREIGDVVPMLETSAKAFALQYQSTPLEVFR DTEFGRVKTNIGARLSTRRMEPKDLAEHFINHNFGWAPFLGDISDFASTYVDADQIIR KISEENGKWIRKKVKVQKDDRSEVVLDHVEPFNSISYTIPCFPYGFPADFFLSPPSWT ITENEKFSISASGKFRFYRPDFDMTLPDYSSAWNKVLRAMKIFGAEVNPYHIWQATPW SWLADWVSNLGAHIQRLQDSVEDQVAAAYFFITAHKSIEREMTVRLPFASGLVQLVFR RSFASRQRVSADSPYGFRLSWDNLSPRRLAILASLGITRQGARHG" gene 1790..2140 /gene="Gerhypos.1_8_2" CDS 1790..2140 /gene="Gerhypos.1_8_2" /codon_start=1 /product="coat protein" /protein_id="DAD50040.1" /translation="MFTDPQSITVAGSAKSLPKILDNGLKSTYQMSDLTFKLRIEHTE TGQRVQSMVRLDQRAIVADPLTSANTYANLGVWIVFNRPLSGFTTTQINDLVQALCSY MTSTVVGKLVGEES" gene 2266..4344 /gene="Gerhypos.1_8_3" CDS 2266..4344 /gene="Gerhypos.1_8_3" /codon_start=1 /transl_except=(pos:2266..2268,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD50041.1" /translation="MKVNVSDYLEVVRSVYTDACTKCSADVFDLRDLETIRSRVENEG MSFLTISLPQFSKFFERSLADGKIDSTSFPGFKSVKGGSIPAFLQGMISQIFNRKTGE IIIYGPPTSDSIDVRGLADDIPTVVESVRQVCRLFAKVELPCSEKRIADAYRSFTEIE QELSEFSASEDSISEFRIVSSLVWGNAFRDFSLDQLIPKHGPGATADRISGNQKYVWR RWHERLEPYFPLIGFGYPSGLPELSEELEFVSFVPEDDEQPVRVITVPKTLKTPRIIA IEPAAMQYAQQAIRTYLYDKLESFWLTSRSISFRDQSKNQAMALKSSRTGRYATIDLS EASDRVPLDLAMIMFEQCPDLHDAVLACRSTRAYLPGENLIDPLRKFASMGSALCFPV EAMFFYTCCVIALLKDSNLSFSQRNVFKVSQGLRVYGDDIIVPSTHAEAVLAYLHKNN CKVNSAKTFVTGKFRESCGTDAYDGYSVTPIYFRRVLPENRRQHSELISLVATRNQFY LKGYWLTASLLQAIAEKHLGVLPYVRETSAALGLYSHLGYESIGRWNSKYQRHEVMSW VPKAVHRSDELGGWPALSKCLLKLDQRYADSVTCNYCSESNVTQGSQVTTIDLTVSRS EDLDDGEIHRYGTLVPEGDSFGRPLPELMSLFSAKASLEGVLAQDEEHLIRSALHGAV TLKRRWVPPH" ORIGIN 1 gctttcgcca ctcttagaca tcagggatga tgtttacgaa agctgaattt gactgcagaa 61 tatcactttt gtggatgaca tgcccaggtt tgggatatgg cttaaatgcc atgatcatga 121 gttcaattct catgcatgtc tttccccatt tgtgattagc aattaggctt ttgcctactc 181 aaattctctc ttatggaggt gtttctatgg ataagactcg atatcgtttt cgggttggtc 241 gtttggacgg tgtcctgccc gatgggtcta actggaatcg ccatgttcat cttggcgatt 301 attacagtaa gctcaccgaa tacaggaatg gcgtccttac cgacctgggt tggggtttac 361 cctactcacc cgttgactac attccagaat tgtctgttac cagtgttgag caaacgtggg 421 atgaacttca tccccgtagt agatcgtata agactactgc gttcacgtct tatggacaag 481 aatcgtttta cagctctggt ggcccatttc tgaatgttaa aatcgatctt ggcgtcccga 541 cttcgggagt catgaattcg ggaacgtatt atagtgtcga tggcaccaaa aagtacgagg 601 gtggctttat gccgcctaat tcggacttct ggggcagtgg ctgggcgagt tcgcccttgt 661 cattcaccgg cgctagtaat gcgttgttac cggatgtctc atcctacttt gaccgggctt 721 ggtctatggc caaacctaaa ttggagtatg ctaaccttta cacttttctc cgagaaatcg 781 gagatgtagt accgatgtta gagactagcg ctaaggcatt tgccttacag tatcaatcga 841 cacctcttga ggtgtttaga gatactgaat ttggacgcgt gaaaactaac attggggccc 901 gtctttcgac tagaaggatg gaacctaagg atttagctga acacttcatc aaccataatt 961 ttggttgggc tccgttcctc ggcgatataa gtgattttgc atcaacttat gtcgacgctg 1021 accaaattat tcggaaaatt tccgaagaaa acggcaagtg gatacggaag aaggtcaaag 1081 tgcaaaagga cgatcgtagt gaagtcgtgt tggatcatgt ggagccgttt aactctataa 1141 gttatacgat tccatgtttt ccttatggct tccctgctga tttctttcta agccctccca 1201 gttggacgat taccgagaat gaaaaattct cgatatcggc ctctggtaag tttagatttt 1261 atcgtcctga ttttgatatg actttaccgg actattcgtc cgcctggaat aaggttctac 1321 gcgccatgaa aatctttggc gcagaagtaa atccatatca tatctggcag gcaacacctt 1381 ggtcgtggct agctgattgg gtatccaatt tgggtgccca catacagcga ttacaagatt 1441 ccgttgagga tcaagttgcc gcggcctact ttttcatcac tgcacacaag tctattgagc 1501 gggagatgac cgttaggtta cctttcgcta gtggccttgt gcaactcgtg tttcgccgct 1561 cttttgcgtc gagacaacgt gtcagtgctg atagtccata tggctttcgc ctctcttggg 1621 ataatttgtc tcccaggaga cttgcgattc tagcttctct cggaattacc cgtcagggtg 1681 cccgacatgg ctagaatatc ctctagtttc cttagctaag ttgttccctt aggaaaggaa 1741 tgacctggaa ctagattaat tcctcattac tctggagaat caaccattta tgttcacaga 1801 tcctcaatct attaccgtcg ccggttcggc taagtccttg cctaaaattt tagacaatgg 1861 gctcaagtct acttaccaga tgtctgatct cactttcaag cttcgtattg aacatacgga 1921 gactggtcag agagttcagt ctatggttag actggatcag cgcgccatcg ttgcggaccc 1981 gttgacttcg gccaacacgt acgctaacct tggtgtttgg attgtgttta atcgtcccct 2041 ttcagggttc acgactacgc aaatcaacga ccttgtgcaa gctttatgct cgtacatgac 2101 gagcaccgtg gtgggaaagt tagtcgggga agagtcttag acttattccc gattagaatc 2161 tcgccgcttt tgcgtgctta tggtgctaga ttgaacttta gcgccattgg cgctattatg 2221 tgacatacgt ggcttgttgg attttcctcc ggttggaggt gatctgtgaa agtcaacgta 2281 agtgactatc tagaggtggt gcgctcagtt tatactgatg catgcaccaa gtgctccgct 2341 gatgtctttg atttacgaga cctggaaaca atcagatctc gggttgaaaa tgaaggaatg 2401 tcgtttttaa cgatatccct tccccaattc agcaaattct tcgagagaag tcttgctgat 2461 gggaagattg actcgacgtc ctttccaggc tttaagtctg ttaagggcgg atcaatccct 2521 gcattcttgc aaggtatgat cagtcaaatt ttcaaccgta agacaggaga gataattatc 2581 tatggacccc caacatctga ttcaattgat gttagaggct tggccgatga cattcctact 2641 gttgttgaat ctgtacggca agtatgccga ctattcgcaa aagtggaatt accgtgctcc 2701 gaaaaacgga tcgcggatgc ctatcggtct ttcacagaaa ttgagcaaga gctttcagaa 2761 ttttcggcat cagaagattc aatttccgaa tttcggattg tttcttctct tgtctggggt 2821 aatgcttttc gtgattttag tctcgatcag cttattccca aacatggtcc cggtgctacg 2881 gcagatcgta tttctggtaa tcagaaatat gtctggcgtc gctggcacga gcgtctcgag 2941 ccttacttcc ctctgattgg ctttggttac ccttctgggt tacccgagtt atcagaggag 3001 ctcgaatttg tatcgttcgt tccagaggat gatgagcaac ctgttagggt tatcaccgtc 3061 cctaaaactc tgaagactcc ccgtatcatt gccattgagc ctgctgcgat gcaatatgcg 3121 caacaggcca ttcgaactta tctatatgat aagctcgaat ccttctggtt gacctcacga 3181 agcatttcgt ttcgtgatca gtcaaaaaac caggcgatgg ctttgaagag ttctcgaacg 3241 ggtcggtatg cgactatcga tctatcggaa gctagtgata gagttcctct tgatctagcc 3301 atgatcatgt ttgagcagtg tcctgatctt catgatgctg ttcttgcatg ccgttccacc 3361 cgagcttact tacctggtga aaatctaata gatcctctca ggaagtttgc ctcgatgggt 3421 agtgctcttt gttttccagt ggaggctatg ttcttttaca catgttgtgt aatagcctta 3481 ctgaaagaca gtaatctctc cttcagccag agaaacgttt ttaaagtttc tcaagggctg 3541 agagtgtatg gtgacgatat tatcgtccct tccactcatg cggaagctgt tctcgcttac 3601 ttgcataaga acaactgcaa agtaaattcc gctaaaacct tcgttactgg aaagtttcga 3661 gagtcatgcg gtactgatgc atacgacggg tattcggtta caccgatata ctttcgtcgt 3721 gtgcttcctg agaacaggcg gcaacactcc gaattgatct ccttggtggc aacacgtaac 3781 cagttttacc ttaaaggtta ttggttaacg gcgtcacttc tgcaagcgat tgcagaaaaa 3841 catttgggtg ttttacccta tgttcgtgag acatcggcag cgttggggct ttactcccac 3901 cttggctatg aatccatcgg aagatggaat tcaaagtacc aacgacatga agtaatgtcc 3961 tgggtgccta aagcagttca tcgctctgat gagctgggtg gttggcccgc cctgagcaaa 4021 tgcttactca agctggatca gcgttacgct gattcggtga cttgtaacta ttgttcggag 4081 tcgaacgtta cccaagggag tcaagtgaca accattgacc ttacggtatc cagatccgag 4141 gatctggacg atggagagat ccatcggtat ggcactttag ttcccgaggg tgatagtttt 4201 ggcaggcctt tgcccgaatt gatgtcccta ttctctgcca aggcgtcctt agagggcgtt 4261 cttgctcagg atgaggagca tttaattcgt tctgcactgc acggcgcagt cacacttaaa 4321 cgccggtggg tcccccccca ttaatgcggg gggttatcag gtttttacct gggtgaggca 4381 caatgggttc cctttgggat acctgcagag cagcctcacc t //