LOCUS BK013473 3768 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.2_11 genomic sequence. ACCESSION BK013473 VERSION BK013473.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.2_11 ORGANISM ssRNA phage Gerhypos.2_11 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Thehlovirus; Thehlovirus edaphovicinum. REFERENCE 1 (bases 1 to 3768) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3768) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-3768 MN034485.1 1-3768 FEATURES Location/Qualifiers source 1..3768 /organism="ssRNA phage Gerhypos.2_11" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786243" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Thehlovirus; Thehlovirus Gerhypos.2_11" gene <1..1226 /gene="Gerhypos.2_11_1" CDS <1..1226 /gene="Gerhypos.2_11_1" /codon_start=3 /product="maturation protein" /protein_id="DAD50251.1" /translation="HRIAQGYQAPHHDLISGDMEAVMPTLKRIYQESPGSRTVLGSPQ TQVYLDGDHRLEVSTNGRGSSHPYRSTHFENQGSLNYGPANASLIFNGWRGANMPVSV QDNALNHPRASFTNLLAATNPTRPDTLLPAFWVELKDIPDMLRQIGRFAKQIYFLSRG VGANQLLRLVRPDHHAKDIAAMNLAIQFGWRPFVQDLWSIVTLHDSVERRRKELKRLY EGPGLLRRLVWDDYILPPVKGSRVVNSDVGSFYSTKYTSFDSVKAWGTVRWKPTYGVP PWVPTNGELRRQLTGLTLDAILLNVWEELPWSWLADWFIPIGNTLQGANRLVAGPVDA CIMQQRKTEEFHEGISLPAQGFLLTTGTSKSQINMRSVMGAVSPDTPNYTASFPALGP SQLSILGSLFLTHVR" gene 1273..1626 /gene="Gerhypos.2_11_2" CDS 1273..1626 /gene="Gerhypos.2_11_2" /codon_start=1 /product="coat protein" /protein_id="DAD50252.1" /translation="MKANTLTLTVNAVAKVLTRVNQDNFGSTYTLLSATDSWTLKFRN STEVAKDKTLFGRHNVYVEYIVFATPTTVQKSYTISTTLRMSQSSDPAYLAYISSALS TLMTTEAPGLIGGES" gene 1722..3752 /gene="Gerhypos.2_11_3" CDS 1722..3752 /gene="Gerhypos.2_11_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50253.1" /translation="MKNPDLTMVGKLVDALFSDIASSGLVTPVCLVGSRYLFSKGLKY EGMAFLTITLPQCSKFLEKSLELGTILHGETPPYMGKRCYYDRRPALLHSLWAQLFNE QGQLSVGASDVEAVFLLRQAFNLFKKLDGDCDTEYVDAEISAYLRIENELPHSHPETW DSVNPMWSRRTGHPLWGASPTPCLEQGELFTVEPRVSYPWSRFDQMCRRMSADLGELD AWNIRPKHGPGAVSERGHVIKHDFRVWPQKLEAHFPRDWHGRHDLSNYGDYDETEPAS RMVAVPKTQKGPRLIAAEPSAHQWIQGGIQRWFEDRVRGTFLGDSIDFRRQEYSKALA LEASFHNRAATVDLSAASDRVSTRLVEYVFQGNITLLNALHACRTRSILIPKSLGSGS LNDRTLLLRKFAPMGSACTFPVQTIIFTMIAHFAVAICTDDWDMSKDAFKRRAAGIRV FGDDIIVPNDSYQTLVDLLHECGLLVNQGKSFSRGMFREACGMDAYRGSDVTPGYIRK LYEPTNPEALASVVECSNNLHKVGMWHLAAELLKTVGTMTLNKLIVAGNAIGSVSVLT FMKGLAPWIKTRVSPTLHRLEAFGVGITAKVSRIEGTGEASLNQFFTDTPAIPLNEDG MPSRSDRLSYLSPKAWEHGQASNARVLVKRAWVHTYHVAREDNPERLLTLRV" ORIGIN 1 cccatcggat cgcccagggc taccaagccc ctcatcatga cctcatttct ggtgatatgg 61 aagcagttat gccgacattg aagaggatct atcaggaatc tcctggtagt agaaccgtct 121 taggttctcc tcaaacgcag gtctatcttg atggtgatca tcggctggag gtttctacca 181 acggtcgtgg atcttcccat ccttataggt ccactcattt cgagaaccaa ggttctctta 241 attatggtcc tgcgaatgcg agtcttatct tcaatggatg gcgtggagct aatatgcctg 301 tatctgtaca ggacaatgcc cttaaccatc ctagggctag tttcactaac ctactggctg 361 ccaccaatcc aactagacca gataccttac tccctgcctt ttgggtagag cttaaggata 421 ttcccgatat gcttcggcaa atcgggcgtt ttgcgaagca gatatatttc ttatcgcgag 481 gagtcggggc taaccagctt ttacgcttgg ttcgtccgga tcaccacgca aaggatatag 541 ctgctatgaa cttagccatc cagtttggat ggcgaccgtt tgtgcaagac ctctggtcta 601 tagtcacgct gcacgactct gtcgagcgac gtcgtaaaga gcttaaacgc ctttacgaag 661 gacctggatt gcttagaagg cttgtatggg atgattacat tcttccccct gtgaagggtt 721 ctagagttgt aaactccgat gtaggttcct tctatagtac taagtacact agctttgact 781 ctgttaaagc gtggggaaca gtacggtgga aaccaactta tggcgttccg ccatgggttc 841 ccactaacgg cgaactccga cgtcaactga ctggcctcac tcttgatgcc attctgctta 901 acgtctggga ggagcttccg tggtcttggc ttgccgactg gtttataccc atcggcaata 961 cgcttcaagg cgcaaatcgt cttgttgccg gccctgttga cgcatgtata atgcagcaac 1021 gaaagaccga ggaattccat gaggggatat ctcttcccgc acaaggtttt cttctgacaa 1081 ctgggacttc aaaatcccag atcaatatgc gttcagtcat gggcgcagtg tcaccagaca 1141 ctccaaacta cactgcctcg ttcccagctt tgggaccgag tcaactatcg atcctaggct 1201 ctctctttct aacacatgtt agatagagcg tcgggacgat taaccccggc gaatgtgcca 1261 taggagtcta ccatgaaagc taatacactc actcttaccg ttaacgcggt tgccaaggtt 1321 ctcactcgtg tgaaccagga caactttgga tcgacctaca ctcttttgag tgctacggat 1381 tcctggacct tgaagttcag gaactcgact gaggtcgcca aggataagac gctgttcggt 1441 cggcataacg tgtatgttga atacatcgtt tttgctaccc cgacgacggt gcagaagtcg 1501 tatacgattt ctacaacgtt gcgcatgtcc cagagctctg atccggctta tttggcctat 1561 atcagctctg cgctgtcgac gctgatgact accgaggccc ctggcctgat cggcggcgaa 1621 tcgtaagatt catcgacgat tgactctgta caagagtccg attttcatgt gatgtgtact 1681 atttgtactc gaggataccc aaccctatgg aaggattaag tatgaaaaac cccgatctta 1741 caatggtagg caagctcgta gatgcattgt tttctgacat tgcatcgtct gggctcgtta 1801 cccctgtttg tttagtcgga tcccgttact tatttagtaa ggggctgaag tatgaaggga 1861 tggccttctt gaccattacc ctacctcagt gctccaagtt tctagagaag tctctagagc 1921 tcggaactat ccttcatgga gagacgcctc cctatatggg gaagcgttgt tattacgacc 1981 gtaggcctgc attactgcat agcctatggg cgcaactctt caatgaacag ggccagttat 2041 cggttggagc atctgatgtc gaagccgtct tcctacttag gcaggcattt aacctgttta 2101 agaaactgga tggcgactgc gatacagagt acgtggacgc cgagatttcg gcatatctgc 2161 gtattgagaa tgagttacct cattctcatc cagaaacgtg ggattcggtg aatcccatgt 2221 ggtcacgacg cactggccac cccctgtggg gtgccagtcc tactccatgt ctggagcagg 2281 gtgaactatt cacagtcgaa ccgcgggtgt cctacccgtg gtctcgcttc gatcaaatgt 2341 gcagacgtat gtctgctgat ctaggtgagc ttgacgcctg gaatatccga cctaagcatg 2401 gtcctggggc tgtatcagaa cgtggtcatg ttatcaaaca tgacttccgt gtctggcccc 2461 agaaactaga ggctcacttt cctcgtgatt ggcacggtcg tcatgatctc tctaactacg 2521 gagactatga tgaaaccgaa ccagcctcga ggatggtcgc tgttcccaaa acgcaaaaag 2581 gtcctaggct catcgccgcg gaaccttcag cgcatcaatg gatccaaggt ggaatccaaa 2641 gatggtttga ggacagagtt cgagggacat ttttgggaga ctctattgac tttcgtcgac 2701 aagagtactc caaggcgctc gccttggagg ctagcttcca taaccgtgct gctactgtgg 2761 acttgtctgc agctagtgac cgcgtttcca ctcgactcgt ggagtacgtt tttcagggca 2821 acatcacgtt gctcaacgca ctccatgcgt gcagaacacg atctatcctt atcccgaagt 2881 cacttggctc cgggagtctg aatgatcgta ccctattgtt gcgaaagttc gctccaatgg 2941 gttctgcttg cacatttccc gttcaaacaa tcatcttcac gatgatagcg catttcgctg 3001 ttgcgatttg cactgatgat tgggatatgt cgaaagacgc ctttaagcgc cgtgcagctg 3061 gcataagagt attcggcgat gatatcatcg ttccgaatga ctcctaccag acactagtag 3121 acctactcca tgagtgcggt cttctggtaa atcaaggaaa atccttctct cgagggatgt 3181 tccgtgaagc atgcggtatg gatgcctacc gtggcagtga tgtcacacct ggctatattc 3241 gcaagctcta cgagcctacg aaccccgaag cgttagcatc agtggtcgaa tgttccaaca 3301 accttcataa ggttggtatg tggcatctgg ctgctgagtt gcttaaaaca gttggtacga 3361 tgacgctgaa taagctaatc gttgcaggca acgctatcgg atcggtttcg gtattaacct 3421 ttatgaaagg attggctccc tggataaaaa ccagggtctc accaaccttg catagactcg 3481 aggcgttcgg cgttggcatc actgccaagg tttcgcgcat tgagggaacc ggtgaagcat 3541 cgcttaatca gtttttcact gatactccag ccatacccct taatgaggat gggatgccgt 3601 cacgtagtga caggttatcc tatctctcac ctaaggcgtg ggagcatgga caggcgagca 3661 acgcgcgtgt tttggtaaaa cgcgcgtggg tccacactta tcatgtggct agggaagaca 3721 accctgagcg gttactaacg ctcagagtgt gatcgacact agggaggt //