LOCUS BK013506 4215 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.2_16 genomic sequence. ACCESSION BK013506 VERSION BK013506.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.2_16 ORGANISM ssRNA phage Gerhypos.2_16 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus solenecus. REFERENCE 1 (bases 1 to 4215) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4215) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-4215 MN033599.1 1-4215 FEATURES Location/Qualifiers source 1..4215 /organism="ssRNA phage Gerhypos.2_16" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786248" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Gredihovirus; Gredihovirus Gerhypos.2_16" gene 30..1349 /gene="Gerhypos.2_16_1" CDS 30..1349 /gene="Gerhypos.2_16_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50368.1" /translation="MATFRTRHRHIPDYVDHCPGGVDRIVERDHFTGLLLSDTTVQTP GSSVPPPTLRGQETTSDENHFDELKSYKAFEFHGDIGGDFYSYKRTALAYPGKRQHLS WSGRNSTTGRDVIHTFDGAIFPLAPNVLPAPPEPVDSNLAPVGTTAIARCKPTNNVAN LATDLVETRRQGLPHLYGASLWERKTLDARNAGHEYLNSEFGWKPLVSDLRNASYAAA NAHKLLEAYARNSGKLVRRRYEFPVTKSESTALYSANQDGYPHGIRLPSGDKIYDTGV NQGNVYRTTRTYLRQWFSGAFTYHLPVGFNSHNEVIRAGSRAGPLLGIELTPEVVWNA EPWTWALDWFSNIGDCVSIYSDMAVDGLVIKYGYVMEHKVTSYTYTFVGRGRYSPHDD SHHPDSITFFVETKRRVRATPFGFGLTWNGLTLRQLAIAAALGLTRW" gene 1420..1782 /gene="Gerhypos.2_16_2" CDS 1420..1782 /gene="Gerhypos.2_16_2" /codon_start=1 /product="coat protein" /protein_id="DAD50369.1" /translation="MAFTDPVTITISGTPYTLPRISIEGDESTYQTSDGLIAVRASHD YGKRNRHLLRIDHSKVTADPFIPADNVKIGMSNYVVFDVPAAGYTVTEQVAIYTGFKT WFTASTDAIITKLLGGES" gene 2124..4031 /gene="Gerhypos.2_16_3" CDS 2124..4031 /gene="Gerhypos.2_16_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50370.1" /translation="MKSLMSLWSAMANDLAIACCTSATSDINTVRRRVENEGLSFLTI VLPDLGKSIQKWIDLGQVGIHPSFMTERGGSLPVFLRGFFCRVFDSSTGVLLDNPDVD AIYALRQLTLSFAKISFPSSDARQRKAMSEFIKCEQEVRESDAKLTEEDLSEFERVSD LLFRKVFSQMDRDVYYGNLLPKHGPGATADRLTSNGKYEMQSWTTRLERYFPAHKYLI PNWHFSDFLDKVTYLEPGAEMPVRVISVPKTLKTPRIIAIEPACMQYTQQALLRSFLD AFDRDELLKNLIGFDDQVPNQELARLGSISGSVATLDLSEASDRVSNQLVRRMMRKWP HLLGAVDACRSRRAEVPGFGVIRLAKYASMGSALCFPIEAMVFTTLIFLGIQKSLNTP LTRRDIKSLSSEVRVYGDDLIVPTRQVRMVVQTLEHFGARVGLDKSFWTGRFRESCGK EYFNGRDVSITRVRQALPSTTTDATEVISTVSFRNQLAVVGCYEGTVEWLDNRLQRIL KEFPVVEPDSSVLGRVSYGERISSSRMHPSLHIPLVQGYGIQAKAPSDQLGGIGALLK CLLKLETSKPQGVFDSDIELVPCYWPGLFSRVQEWEDTPWLPTVGDEKHLERSGRPKR VSIKLGWRPVT" ORIGIN 1 caattcgtca ctactcgagg aggtacggaa tggcaacatt ccgcacgcga caccgccata 61 ttccggacta tgttgatcat tgtccgggtg gcgttgatcg tatcgtggaa agggatcact 121 ttactggtct tctgctcagt gatacaactg tgcagacgcc cggtagtagt gttcccccac 181 ccactcttcg aggtcaggag actacttctg atgagaacca tttcgatgaa ctcaaaagct 241 ataaagcttt tgagtttcat ggtgacatcg gtggtgattt ctactcttac aagaggactg 301 cgcttgccta tccgggcaag aggcagcatc tctcttggag tggtagaaat tcgacaacgg 361 gacgtgacgt cattcatact tttgatggcg ccattttccc gcttgcaccg aacgttttgc 421 ctgctcctcc tgagccagtt gattcaaatc tggcgccagt tggaactacg gcgatcgctc 481 gatgcaaacc gactaacaac gtcgccaacc tggctactga tctcgtggaa acgagacggc 541 agggcttgcc ccatttgtat ggtgcaagtc tctgggaacg gaaaactctt gacgcgcgta 601 atgcgggtca tgagtatctg aactcagagt ttggttggaa gccacttgtc agcgacctgc 661 gtaacgcaag ttacgcggcc gctaacgcgc ataagcttct tgaagcttat gctcgtaact 721 ccggcaagtt ggttagacgt cgatatgagt tcccagtgac gaaatccgag tcaacggcct 781 tgtactccgc gaatcaagac ggataccctc atggtattcg tcttccttcc ggagacaaga 841 tctatgacac gggagtcaat caaggcaacg tataccggac aacacggacg tatctacgtc 901 agtggttctc tggtgccttc acgtatcatc ttcctgtggg atttaattct cacaatgaag 961 taatacgtgc gggttcgcgg gctggtcccc ttctagggat tgagctcacg ccagaggtag 1021 tctggaatgc ggagccttgg acttgggccc tcgactggtt ctccaatatc ggagactgtg 1081 tcagtattta ctctgacatg gcagtcgatg gtttggtgat taagtacggg tatgtgatgg 1141 aacataaagt cacatcatat acctatactt ttgtgggacg gggaagatat tctccccatg 1201 atgattccca ccaccctgac tctatcacct tcttcgtgga gacgaagagg cgggtcaggg 1261 cgacaccatt tgggttcggg ttaacctgga atgggttaac cctccgccaa ctggccatag 1321 ctgctgccct cggtttaacc cgatggtaga gctgatggtt gtcctatgcc ttgccacatg 1381 ggcttggcat aaaaacccaa gtcctaggag tgatgcctga tggcatttac cgatcccgtt 1441 acgatcacta tttctggtac gccatacaca cttcctcgta tttcaatcga gggagatgag 1501 tcaacgtatc agactagtga tgggcttatt gcggttcgtg cttcccatga ttatggaaag 1561 cgcaatcgcc atttgctcag gatcgaccat tccaaagtta cggctgatcc gtttatccct 1621 gcggacaacg tcaagatcgg catgagtaat tatgtcgtct ttgacgtgcc cgctgctgga 1681 tacacggtca ccgaacaggt cgcgatttac acaggcttta aaacctggtt caccgcgtcc 1741 acggatgcga tcatcactaa gcttctaggt ggtgagtcgt aaggatcttg acgcttctcg 1801 tttttataga cggaagcgtc atgaccagac tcggcctatt gctgtggaat ccgcaacggt 1861 tctggagagg cgtagcttta gggctacggc tacctcaact gttggagtgg ttcggacggc 1921 ggtaggtttg atcctgggtg tgtatgtttt atatacacat ttccgggaca tttaccggtc 1981 ctggtgccgt taggcatcct gtggttgcca attggaagac atagcctaca gatatggcta 2041 tgttggcata gacgtgtagt ctatgtccat tggcagagat gtcaccaggc agggattagg 2101 ttacccccta tcgaggaggg cctatgaaaa gcctgatgtc actctggtca gcgatggcta 2161 atgatcttgc catcgcttgc tgcaccagcg ccacttctga cattaatacg gtcagaagga 2221 gagtcgaaaa tgagggacta tcgtttctaa cgatagtcct acctgacctt ggaaagtcca 2281 tccaaaaatg gatagacctt ggtcaagtcg gcatccaccc ctcttttatg acagaaagag 2341 ggggaagtct ccccgtattt ctacgaggtt tcttctgccg tgttttcgac tctagcaccg 2401 gcgtattgct tgataatccg gacgttgatg caatctatgc gttaaggcaa ttaacattgt 2461 ctttcgcaaa gatttccttt ccgagcagtg atgctcgtca aaggaaagca atgtccgaat 2521 ttatcaagtg tgagcaggag gtccgagaat cagatgccaa actcacggaa gaggatctta 2581 gtgagtttga acgtgtatct gatttgcttt ttcggaaggt cttctcgcaa atggacagag 2641 atgtctatta cgggaacctt cttccaaagc atggcccagg tgctactgca gatcgtctta 2701 ccagtaatgg taagtacgaa atgcaatcct ggactacccg acttgagcgg tacttccccg 2761 ctcataagta ccttatacca aattggcact ttagtgactt tttggataag gtgacctacc 2821 tcgaacccgg tgctgagatg cccgtgaggg ttatctcagt gcctaaaacg ttgaagacgc 2881 ccaggattat cgcgattgag cctgcgtgta tgcaatatac acaacaggca ctgttgcggt 2941 ctttcctgga tgctttcgac agggatgaac tcctgaagaa tctaattggg ttcgatgatc 3001 aagtcccgaa tcaggaactt gctcgtcttg gctcaattag tggttcagtt gctacactcg 3061 atttgagtga agcatctgac cgcgtctcca atcagctcgt taggaggatg atgcggaaat 3121 ggcctcattt gctaggggcc gttgacgcat gtcgctcccg tcgggccgaa gtacctggtt 3181 tcggtgttat acgcctagcc aagtacgcgt cgatgggttc agcgctctgt tttccgatag 3241 aagccatggt atttactacc ctgatcttct taggaattca gaagtcgctc aatacgccgc 3301 ttactagacg ggacataaag tccttgtcta gcgaggtgcg tgtctatggg gacgatttga 3361 ttgtccctac tagacaggtg cgtatggtcg tacagacgct tgagcatttt ggtgctcgag 3421 ttggtctgga caagtctttc tggaccggaa ggttcagaga gtcttgtggg aaggaatact 3481 ttaatggacg tgacgtgagt atcacgcgcg tccggcaagc gttaccttcc acgaccactg 3541 acgcgacgga agtgatctca actgtttcct ttcggaacca actggcggtt gtcggttgct 3601 acgaaggaac ggttgagtgg ctggataatc gacttcagag aattcttaaa gaattccctg 3661 ttgtcgagcc agactcttcc gtgctgggca gggtctcata cggtgaacga atatcaagtt 3721 cccgtatgca ccccagcctg catattccct tagttcaggg atatggtatt caggccaaag 3781 caccgagcga tcaactcggt ggtataggag ccctgcttaa gtgtttactc aagctggaaa 3841 ccagtaaacc acaaggggtt ttcgatagcg atatcgaatt agtcccctgt tactggccgg 3901 gcttattctc ccgcgtgcaa gagtgggagg ataccccatg gttgccaacc gtgggtgatg 3961 agaagcactt agagcgttca ggacgcccca agcgcgtcag catcaagctt ggatggcggc 4021 cagtgacttg acattgtcac tggcggggcc ttatggcctt gtgggagaag ccaagcatgg 4081 aggagttaag tctgtgctca taacatttgc gcacagcact cctccgccta cctaacggta 4141 ggttggcttc tggggcgcgg atgtcgatct gaaaccggca tcctacatcc ccgggagatg 4201 catatggcag tgcat //