LOCUS BK013524 4072 bp RNA linear PHG 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.2_18 genomic sequence, sequence. ACCESSION BK013524 VERSION BK013524.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.2_18 ORGANISM ssRNA phage Gerhypos.2_18 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Huleruivirus; Huleruivirus geocola. REFERENCE 1 (bases 1 to 4072) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 4072) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT THIRD PARTY DATABASE: This TPA record uses data from DDBJ/EMBL/GenBank entry MN034542.1 ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4072 /organism="ssRNA phage Gerhypos.2_18" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786250" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Norzivirales; Atkinsviridae; Huleruivirus; Huleruivirus Gerhypos.2_18" gene 86..325 /gene="Gerhypos.2_18_1" CDS 86..325 /gene="Gerhypos.2_18_1" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50434.1" /translation="MPLNTISQYSRDALDRVDRELSKVPVNSTYLDGFAAGVLITSLL ETASGELFDEASTLWSLYYRIYERYEQNRKLNGGR" gene 312..422 /gene="Gerhypos.2_18_2" CDS 312..422 /gene="Gerhypos.2_18_2" /codon_start=1 /product="hypothetical protein" /protein_id="DAD50435.1" /translation="MVDVKLCRFFFETIGYLSRFYRSLLGLYVLFLKLLT" gene 419..1729 /gene="Gerhypos.2_18_3" CDS 419..1729 /gene="Gerhypos.2_18_3" /codon_start=1 /product="maturation protein" /protein_id="DAD50436.1" /translation="MNHNYTVGVKANVIDSATDDHGYSVVNILNKDYSIAQTKLGSSV PNWKRKIAMHEDASSSYELWISRLTFSNAESSARFHYGPPTNITNGRWNEQGPLAGIA PFFQPTGQPEPGWGVLSVRARNLLNVKFLNKLREVTNSFNGGEFLGEIRETLNGIRHP AEALRKGFSSYLFTLKKRRSGLKRGLSLKERTRAVNRMVAGTYLEWKFGVTPTLNDIH DAGLAYNDLFDDLANLGPMTQVVAKIDDSVVDKGWGRQLFRPGNFWHVWTDTNPQRKV SGRMVGYVDRSVNQPVRFDTRLGISPRDFVPTCWNLLPGSFVADYFVNIGDCLSAAGT STCGLKVLVLTTRTKRLYEAQAQMDKTMTLAALAGANVTVDSLTGSISHMKYETSYWV REVLAPLDDLWVIPVISLPTSPTRWINLAALSAQVAETKYAIRP" gene 1777..2241 /gene="Gerhypos.2_18_4" CDS 1777..2241 /gene="Gerhypos.2_18_4" /codon_start=1 /product="coat protein" /protein_id="DAD50437.1" /translation="MTISLSNITGSAQTGLTTPGYTVVADVPPPGTKGKQYAVSALTG TQVGVEASLVGNPFTLTYIGPTNPKGPPAVSQTTGQPTSTPRNTHKWIVRKGMEVVSG YFATANFTLQMDIPAGAELKDPESIRAALSALIGALSQISSGMGDTLVSGVM" gene 2311..4059 /gene="Gerhypos.2_18_5" CDS 2311..4059 /gene="Gerhypos.2_18_5" /codon_start=1 /transl_except=(pos:2311..2313,aa:Met) /product="RNA-directed RNA polymerase" /protein_id="DAD50438.1" /translation="MTKISSTALYHQLIEDLRPFLTTDQEIAAYLKGDIPLYPDSDPV QWAAVAQLKSLTKKLVDDEAGDADARALEKFRESNRLCERWSWSKESWSMLDDILVGT FKQVVHEVFSHDSVCFDDLSYLSSRGALGSGMNVRSRGNDMYSKLYMAPLSCSKASIF DLYQRYVGSMPRTASAEFIRTLHVGHGPSVCESKVSFAAKSNDISRTICTEPTLNMWY QRAYSDLLEKRLQSAFGIDLAVQPDINRELCRLGSIDGRFATIDLTSASDSLSLKLLR DILPKGCLRILEYFRCTHTILPDGSREELHMVSSMGNGFTFSLQTLIFCCVVEACYRV LDIAISRSVVRGKTWTCGNFSVFGDDIIVVARANNCVSRLLGLLGFRVNVTKSFSIGP FRESCGVDFLNGTNVRPVFIKRLDSEASRFTAINNLRLWSARVNIWIRRTLKYLLRYV RRLYVPRSMPPEVGLHVPSIMVRKIRDDQGIHFAFRALDPVPARYHVKEWEIRGPRFG KRKPFNPDGLLLFALAGGLRDGHFDVRVNEPHVKYRLRLHVTPNWDALPMGLDPLDRA GWDRWSSDSLAVLSQL" ORIGIN 1 gctccttagt gtgcttctaa ggcactgagg gcaggcatgg ggtttcccct gtagcctgat 61 ccgacattta cccaggagac catcgatgcc actgaatact atatcccaat actcacgtga 121 tgcccttgat cgggttgatc gtgaattgag taaggtgcca gtgaattcga catatcttga 181 tgggtttgca gcgggcgtcc tcatcacttc cttgctcgaa actgcgtccg gagaattgtt 241 cgatgaggct tccactttgt ggtcgcttta ttatcgaatc tacgaacgct atgagcagaa 301 taggaagtta aatggtggac gttaaactgt gtcggttctt cttcgagacg atcggctatc 361 ttagtcgatt ttatcggagt cttctaggac tttacgttct attcctcaag ctcctcacat 421 gaaccacaat tacacggtcg gagttaaagc taacgtcata gactcagcga cagatgatca 481 cggctatagt gtcgtgaaca tcctgaacaa ggattattcc attgctcaga cgaagctggg 541 gtcttccgtt cccaattgga aacggaaaat tgctatgcac gaggatgcca gcagttcgta 601 tgaactctgg atatccaggc ttactttctc caatgctgag tcgtcagcga ggttccatta 661 tggacctcct acgaatatta ccaatgggcg ttggaatgag caaggtcccc tagcggggat 721 tgcgcctttc tttcagccta ctggtcagcc tgaaccggga tggggtgtct tatctgtgag 781 ggctagaaat ctgctcaacg ttaaattcct gaataaactc agggaagtta caaactcctt 841 taatgggggt gagtttctag gcgagatcag agagacgtta aatggcatcc gccaccctgc 901 cgaagctctg cgtaaaggct tctcctctta cctgtttacc ttaaagaaaa ggcgatcagg 961 cttaaaaaga ggcctctccc tcaaggagag aacacgagcc gtcaacagaa tggtggcagg 1021 gacctacctc gagtggaagt ttggtgtaac cccaaccctt aacgatatac atgacgccgg 1081 tttggcgtac aatgatctat tcgacgacct cgctaatctt ggtcctatga cgcaagtcgt 1141 agctaagatt gacgattcag ttgtcgataa aggatggggc agacaactct tccggccagg 1201 aaatttctgg cacgtgtgga ccgataccaa ccctcaaagg aaggtttcgg gccgcatggt 1261 agggtatgtg gataggtcgg tgaatcagcc ggtacgattt gatactcgct tggggatctc 1321 cccgcgcgat ttcgtaccga cctgttggaa cctccttccc gggtcttttg tggctgacta 1381 cttcgtcaat attggcgatt gtctgtcagc agctggcaca agtacctgcg ggcttaaagt 1441 gttagttttg accacgcgaa cgaaacgcct ctatgaggcg caagctcaga tggacaagac 1501 gatgactcta gcggccttag ctggtgcgaa tgtcacagtg gatagcctaa ccgggtcgat 1561 ctcgcatatg aaatacgaga cctcgtactg ggtccgtgag gtactggctc ctctggatga 1621 cctttgggtc attccagtga tcagtctccc cacgtctccg acgcggtgga taaaccttgc 1681 ggcacttagc gctcaggtcg ccgaaactaa gtatgcgatt agaccttaat tctaacctta 1741 tgtctccttt ggagctacaa atgtgtatgg attcccatga caatttcttt gtcgaatatc 1801 acgggctctg cccagaccgg tctcacgacc cctgggtata ccgtagttgc ggatgtaccg 1861 cctccgggta cgaaagggaa gcaatacgcc gtgtcagcat tgaccggtac ccaggttggc 1921 gttgaagcca gcttggtcgg aaaccccttc actctgacct acattggtcc gacgaaccct 1981 aaaggtccgc cggccgtgag tcagactacg ggacagccga cttccactcc acgaaacact 2041 cacaaatgga ttgttcgtaa gggtatggag gttgtcagtg gctactttgc cacggcgaac 2101 ttcacacttc aaatggacat tcctgcggga gccgagttga aagacccgga aagcattcgt 2161 gcagccctgt cagctctgat cggagcactt agccagattt catctggtat gggtgatacg 2221 ctcgtatcag gcgtgatgtg aatcacgtct gagatgctga tgctttcgta tctggggtcc 2281 tcattgaggg ccccttgagg tgggacaatc gtgactaaga ttagttcgac tgctctttat 2341 caccaactca tagaagacct gagaccgttt ttgacgacgg accaggagat tgccgcttat 2401 ttgaaaggcg acatccctct ttatcccgac tcggatcctg tgcaatgggc tgcggtagct 2461 cagctgaaat cgttgacgaa gaaacttgtc gacgacgagg ctggcgatgc ggatgccaga 2521 gcattggaga agttcaggga gtctaataga ctctgtgaac gatggtcttg gtctaaagag 2581 tcttggagca tgcttgacga tatactagtg ggtaccttta aacaggtagt ccatgaagtc 2641 ttctcgcatg atagcgtttg tttcgatgac ctctcttacc tctctagtag aggtgcgttg 2701 ggttccggga tgaatgtacg cagcaggggc aatgacatgt atagcaagct gtacatggca 2761 cctcttagct gttccaaggc ttctatcttt gatttatatc aaaggtacgt cggctctatg 2821 cctaggactg cgagtgcgga gtttattcgc actctacatg tcgggcacgg gccaagcgtc 2881 tgtgagtcta aggttagctt tgctgcgaag tcaaatgaca tcagcagaac catatgtacc 2941 gaacccacac taaacatgtg gtatcaacgg gcctactcag acctgttgga aaagcgccta 3001 caaagcgctt ttggcataga cctcgctgtc caaccggaca ttaatcgaga actatgtcgc 3061 cttggtagca ttgatggtcg ttttgcgacc atcgatctta cctcggcatc ggatagtctc 3121 tctctgaagc tcctaaggga tatccttccc aaagggtgtc tccgaatatt ggagtacttc 3181 agatgtacgc ataccatcct tccggatggc tcgcgtgaag agcttcatat ggtatcgtca 3241 atggggaatg gttttacgtt ctccttacag acgttaatct tctgttgtgt agtcgaagcg 3301 tgctacaggg tcctggatat agcaatatcc aggtcagtag tgcgtggaaa gacgtggacg 3361 tgcgggaact tttcggtgtt cggggatgac attatagttg tagcgagagc taacaactgt 3421 gtgtcacgac tcctgggctt actgggtttc cgtgtcaacg ttactaagtc cttttcgata 3481 ggaccatttc gtgagtcctg tggtgtcgac ttccttaacg gcaccaatgt cagaccggtc 3541 tttataaaaa gactggactc tgaggcctca cgtttcactg ccatcaataa cctcaggctg 3601 tggagcgcgc gggttaacat atggatacgg cgaacactta agtacctact aaggtacgtt 3661 cgccgcctgt atgttccgcg ttccatgccc cctgaggtcg gcctccatgt tccttccatt 3721 atggtacgaa aaattcggga tgatcagggt atccatttcg cctttagggc gttggatcct 3781 gtacctgccc ggtaccatgt aaaagaatgg gagattagag gcccgcgatt cggaaagaga 3841 aagcctttca acccagatgg gctgctcctc ttcgcgttgg ctggtggact tcgcgacggt 3901 cactttgacg ttagggtgaa tgaaccccat gtcaaatacc gtcttcggct tcacgtaacc 3961 ccgaactggg atgcgttgcc gatgggactc gatcctttgg atcgagcggg ttgggatcgc 4021 tggagtagcg attccttagc tgttttgtca cagctttaag cccttaggac ag //