LOCUS BK013543 3997 bp RNA linear VRL 09-FEB-2021 DEFINITION TPA_asm: SsRNA phage Gerhypos.2_21 genomic sequence. ACCESSION BK013543 VERSION BK013543.1 KEYWORDS Third Party Data; TPA; TPA:assembly. SOURCE ssRNA phage Gerhypos.2_21 ORGANISM ssRNA phage Gerhypos.2_21 Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Abakapovirus; Abakapovirus humadaptatum. REFERENCE 1 (bases 1 to 3997) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Leviviricetes taxonomy JOURNAL Unpublished REFERENCE 2 (bases 1 to 3997) AUTHORS Stockdale,S.R., Callanan,J., Adriaenssens,E.M., Kuhn,J.H., Rumnieks,J., Shkoporov,A., Draper,L.A., Ross,P. and Hill,C. TITLE Direct Submission JOURNAL Submitted (01-SEP-2020) Gut Phageomics, APC Microbiome Ireland, Western Road, Cork T12YT20, Ireland COMMENT ##Assembly-Data-START## Assembly Method :: metaSPAdes v. v3.11.1 Sequencing Technology :: Illumina ##Assembly-Data-END## PRIMARY TPA_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-3997 MN033418.1 1-3997 FEATURES Location/Qualifiers source 1..3997 /organism="ssRNA phage Gerhypos.2_21" /mol_type="genomic RNA" /isolation_source="soil" /db_xref="taxon:2786254" /country="USA" /note="Viruses; Riboviria; Orthnornavirae; Lenarviricota; Leviviricetes; Timlovirales; Steitzviridae; Abakapovirus; Abakapovirus Gerhypos.2_21" gene 87..1337 /gene="Gerhypos.2_21_1" CDS 87..1337 /gene="Gerhypos.2_21_1" /codon_start=1 /product="maturation protein" /protein_id="DAD50503.1" /translation="MPESHVKERAIYPPTAVGTTIRTVVGVPNGTSKATANYPGKLGR QITVSRGNPFHTRVKGDMRDLGGNFYSQKRFQTWDSKGSMAVSTRDRFGREVVNHHTG PVLPTNPVTVGWPPDISSSTEVLEELGATAIARCKPTNSVADAATFLAELRQDGLPHL AGSSTWKGRNQVAKDAADDYLNVEFGWLPLVSDVKSFAKAVAHANTVLSQYERDAGKV VRRRYNFPVQKETEVIDFGEPYPAYFVPYDSDFETNNLPGGGMLKVETFKRQWFSGAF TYALPSGYDSRSALDRYGLMAEHVFGLKLTPEVLWNAAPWSWAADWFSNSGDVISNIS SWSTDGLVMLYGYIMEHSYCVHTYTKPKTGLCNETAKASALTLVTETKIRHGANPFGF GVTWEGLSPLQLSIAAALGISRKP" gene 1415..1777 /gene="Gerhypos.2_21_2" CDS 1415..1777 /gene="Gerhypos.2_21_2" /codon_start=1 /product="coat protein" /protein_id="DAD50504.1" /translation="MAFSDPQSITISGSTISLPRVSSGSGNSEYLSSDGLVKLSANNA YGRRTRRVLRLDHSKVTADPFIPAQNTKVSMSNYIVFDVPVAGYTNAEALAVYNGFKS LYTASTDAIIAKLLGGES" gene 1976..3838 /gene="Gerhypos.2_21_3" CDS 1976..3838 /gene="Gerhypos.2_21_3" /codon_start=1 /product="RNA-directed RNA polymerase" /protein_id="DAD50505.1" /translation="MKSLSLLWIKLAEESASRCDTSATMDIKTIHRRIEHEGLSFLTI TLPQFGKDFEKSLDQGVVDRRLFTGFRWKGGLPRFLGGFLDHVFDRGTGRLLDDPSID AILAVRQLSLLFSKVLLPCSDARVEAAMDAFIECEKDVRVADSCLSSSDIEDFRRVSA VLFERVFTRMDKDIHDLEVRPKHGPGTTADRLLGNQKFDLRTWTTRLERIFPSGEFLL PNWRYYDQLDEVDILEPGQELPVRVVPVPKTLKTPRIIAIEPTAMQYAQQGVLRVILD RLSEDKSLDKMIGFLDQSPNQEMARLGSSDGTLATIDLKEASDRVSNQLVRELVRRWP HLHEALDATRSRKADVPGHGVIRLAKFASMGSALCFPIEAIVFTTLIFIGIERVLNRP LRRSDIEILNDSVRVYGDDLIIPVDYVSSVVHVLESFGIRVNTAKSFWTGRFRESCGK EYYDGHDVSIVKVRRDFPTQRQDATGVVSLVSLRNQLYFAGYWGTVAWLDDHIRKIIR YFPVVDPSSPVQGRYSFLGYETQRMDPALHRPLVRGYVVHARIPQIPLDDTGALLKYL LKHPLYDENREEMDRKILRGLPVLGGQPSVDEGHLERSGRPQAVNLKLRWSSPF" ORIGIN 1 cgcaccgaga ggtgcgccac gacgcagtgc attaatcacc catgcgcgta agcgcatgtt 61 atccaccaaa ggagctggac agcccaatgc ccgagagtca cgtcaaggag cgtgctatct 121 atccgccaac ggcggtaggt accacaatcc gaacggtcgt tggtgttcct aatggaacat 181 caaaggccac ggcgaactac ccgggtaaat tggggagaca aattactgtc tcgaggggca 241 atccctttca cacccgtgtt aagggtgata tgagggatct tggtgggaat ttctattctc 301 aaaagcgatt tcagacatgg gactcaaaag gttccatggc tgtatcgact cgagatagat 361 tcggtcgcga agtggttaat caccacacgg ggccggtact tcctaccaat cctgtcactg 421 ttggttggcc tccagatatt tcttcaagca cagaagtgct tgaggaactg ggagctaccg 481 ccattgccag gtgtaagccc acaaactcag ttgcagacgc tgcaaccttt ctcgccgaac 541 tgcgccaaga tgggttaccc catctagcgg gctcttccac atggaagggt cgtaatcaag 601 tcgcaaaaga tgcggctgat gattacctga acgtcgagtt tggttggcta cctttagtaa 661 gtgacgtaaa gtcatttgct aaagccgttg cacacgctaa cactgttttg tcacagtatg 721 agcgtgatgc tggcaaggta gtccgtcggc gctacaactt tcctgtccaa aaggagactg 781 aagttatcga tttcggagaa ccgtatccgg catattttgt gccgtacgat tccgacttcg 841 agaccaacaa tctccccggg ggtggcatgt tgaaggtgga gaccttcaaa cgtcagtggt 901 tctcaggcgc gtttacctat gcactaccga gcggatacga ctcccgttcg gctctggata 961 ggtacggcct gatggctgaa catgtgttcg gccttaaact gacgccagaa gtactctgga 1021 atgccgctcc atggagctgg gccgcggatt ggttctccaa ttctggagat gttatttcaa 1081 acatctctag ctggagtacc gatggtctgg ttatgctgta tgggtatata atggaacaca 1141 gttactgtgt ccatacctat actaagccta aaaccggtct ctgtaacgag acggctaagg 1201 cttccgccct aaccttggtt actgaaacca agataaggca cggagcaaac ccctttggtt 1261 ttggagttac ctgggaaggc ttgtcacctc tccagctctc catagctgcg gctctcggca 1321 taagtcgaaa gccgtagtcg gtgctgtttg cactgacgtc aaccactacg gaatgtgtag 1381 atttctgtct accattcctg aaaggagcac gcttatggcg ttctcagacc cccagtccat 1441 cacgatttcg ggatccacta tctcgctacc tcgagtttcc tcggggagtg ggaatagtga 1501 gtacctgtcg tctgatgggc tggtgaagct ctcggcgaac aacgcctacg ggcgtcgtac 1561 ccgccgagtg ctgcggctcg accatagcaa ggtcactgca gacccgttta ttccagcgca 1621 gaacacgaag gtgtcgatga gtaactacat cgtcttcgac gtgcctgttg ctgggtacac 1681 gaatgcagag gccttggctg tttacaacgg ctttaagtcg ttgtacaccg ccagcactga 1741 tgcgatcatc gccaagcttc ttggcggcga aagctaagcg ccgacggaca tcagctgagc 1801 gtaacgtgat tttgatcata ccttttccta attcaaggat tgtgtatgct ctcattctcg 1861 ttatactcgt tatggccgac attgtgcctg cacattctct attcgagttt gtgttcagcg 1921 caatgccctg agacaacgta agctaggaaa gaccacctct atttaaggag gggctttgaa 1981 aagcctatcg ttgctctgga taaaactagc agaagaatct gctagcaggt gtgacactag 2041 cgccacgatg gatattaaaa ccatccatcg tcgtatcgaa catgaggggt tgtcgtttct 2101 tacgataacc ctaccacaat ttggaaaaga cttcgaaaaa agtcttgacc aaggagtggt 2161 tgatcgacgt cttttcaccg gtttccggtg gaaaggaggt ctcccccgat ttctcggagg 2221 tttcctcgat catgtgttcg atcggggtac gggtcgattg ctcgatgatc cgtctataga 2281 tgcaatcctt gctgtaaggc aattgagttt gctcttcagt aaggtgcttc ttccttgcag 2341 tgatgcaagg gtagaagctg ctatggacgc atttatcgag tgtgagaagg atgtccgcgt 2401 ggctgatagc tgcttgagtt cctctgacat agaggacttt cgcagagtat cagctgtgct 2461 ttttgaacgt gtcttcacaa ggatggataa agatatccat gacttggaag tgcgtcctaa 2521 gcacggacca ggtactactg cagatcgtct tctgggaaac cagaaattcg accttaggac 2581 ctggaccact cgcttggaga ggatctttcc gtcaggagag ttcctactcc ctaattggcg 2641 ttattacgac caattagacg aggtggacat cctcgaaccc ggtcaggaat tacccgttag 2701 ggtggttcct gttcctaaga cgctcaagac acctcgaatc attgcgattg aaccaacggc 2761 tatgcagtat gcacagcagg gggttcttcg cgtgattctc gatcgtttgt ctgaggataa 2821 atccttagac aagatgatcg gctttcttga ccagtctcct aatcaggaga tggcaagact 2881 cggttccagt gatggaaccc tcgctaccat cgatttgaag gaagcgagcg atcgtgtctc 2941 gaatcagctg gtacgtgaac ttgttcgtcg ttggccccat ttgcatgagg cccttgacgc 3001 aactcgttca cggaaggctg atgttcctgg ccatggcgtt attcgcctag ccaagttcgc 3061 atctatgggt tcagcacttt gcttccccat tgaagccatt gtctttacga ctttgatctt 3121 cattgggatt gagcgagtgc tcaatcgccc gttgagacgt tcagatatag aaatcctgaa 3181 cgactcggtg cgtgtctacg gggatgattt gattatccct gtagattatg tgtcgtccgt 3241 tgtccatgtg ctcgaatctt ttgggattcg agttaacacg gccaagtctt tctggaccgg 3301 taggttcaga gagtcttgcg gaaaggagta ttacgacggc catgacgttt ccattgtcaa 3361 ggtccgacgt gatttcccga cacaacggca ggatgcaacg ggagttgtgt cacttgtctc 3421 ccttcgtaat cagctgtatt ttgctggtta ttggggaaca gtggcatggc ttgatgacca 3481 cattaggaag atcattcgat acttccctgt tgtggaccca tctagtcccg tgcaaggccg 3541 gtattcattc ctcgggtatg agacccaaag aatggatcca gctctacata gacctcttgt 3601 aagaggctat gtagttcatg ctcgtatccc ccagattcct ctggatgata cgggtgcctt 3661 gctcaagtac ctactcaagc atccccttta cgatgaaaat cgtgaggaga tggacaggaa 3721 gatccttcgg ggtcttccgg tcctcggcgg acagccatcc gtcgacgaag gtcacttgga 3781 gcgttctgga cgcccgcaag ccgtcaacct caagctgcgg tggagctcac ctttctaaag 3841 gtgagcgggg gccaaatgcc cctgtgggag ataccaagtt aggtccaggg tcaaagccaa 3901 aaaaaaccta aaatacaaat agaacctcaa ccaaaaacag ctcaaaatcc attatttaaa 3961 ttcctacatc aaagaactgt actgccaaaa ataacaa //